{ "num_helices": 133, "helices": [ { "index": 1, "num_stems": 0, "strand1": "UCCAC", "strand2": "GGGUG", "bp_type": ".||||", "helix_form": "xxA.", "num_pairs": 5, "pairs": [ { "index": 1, "nt1": "///a/49", "nt2": "///a/356", "bp": "U-G", "name": "--", "Saenger": "--", "LW": "cWS", "DSSR": "cW-m" }, { "index": 2, "nt1": "///a/47", "nt2": "///a/355", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/52", "nt2": "///a/353", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/53", "nt2": "///a/352", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/54", "nt2": "///a/351", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 2, "num_stems": 0, "strand1": "AUGC", "strand2": "UACG", "bp_type": ".|||", "helix_form": "x..", "num_pairs": 4, "pairs": [ { "index": 1, "nt1": "///a/55", "nt2": "///a/362", "bp": "A+U", "name": "rWC", "Saenger": "21-XXI", "LW": "tWW", "DSSR": "tW+W" }, { "index": 2, "nt1": "///a/56", "nt2": "///a/350", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/57", "nt2": "///a/349", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/58", "nt2": "///a/348", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 3, "num_stems": 0, "strand1": "AGUCGCGGAUAAAGGGAGC", "strand2": "GCGGCGACUUAGGUCCUCG", "bp_type": ".|||||.||....||||||", "helix_form": "...xA..........A..", "num_pairs": 19, "pairs": [ { "index": 1, "nt1": "///a/60", "nt2": "///a/101", "bp": "A+G", "name": "Linker", "Saenger": "--", "LW": "tSS", "DSSR": "tm+m" }, { "index": 2, "nt1": "///a/61", "nt2": "///a/100", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/62", "nt2": "///a/99", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/63", "nt2": "///a/98", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/66", "nt2": "///a/97", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/67", "nt2": "///a/96", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/68", "nt2": "///a/95", "bp": "G-A", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/69", "nt2": "///a/94", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/70", "nt2": "///a/93", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///a/71", "nt2": "///a/92", "bp": "U-U", "name": "--", "Saenger": "16-XVI", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///a/72", "nt2": "///a/91", "bp": "A-A", "name": "~Sheared", "Saenger": "--", "LW": "tSH", "DSSR": "tm-M" }, { "index": 12, "nt1": "///a/73", "nt2": "///a/90", "bp": "A-G", "name": "--", "Saenger": "--", "LW": "tHS", "DSSR": "tM-m" }, { "index": 13, "nt1": "///a/74", "nt2": "///a/89", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 14, "nt1": "///a/75", "nt2": "///a/88", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///a/76", "nt2": "///a/87", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///a/77", "nt2": "///a/86", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///a/78", "nt2": "///a/85", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///a/79", "nt2": "///a/84", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///a/80", "nt2": "///a/83", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 4, "num_stems": 0, "strand1": "AAAGUCCAGACUCCU", "strand2": "GUCAAGGUCGGAGGG", "bp_type": "....|||||.||||.", "helix_form": "xxx.....x.....", "num_pairs": 15, "pairs": [ { "index": 1, "nt1": "///a/103", "nt2": "///a/318", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 2, "nt1": "///a/321", "nt2": "///a/317", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 3, "nt1": "///a/323", "nt2": "///a/316", "bp": "A-C", "name": "~rHoogsteen", "Saenger": "25-XXV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 4, "nt1": "///a/326", "nt2": "///a/315", "bp": "G-A", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/327", "nt2": "///a/314", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/328", "nt2": "///a/313", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/329", "nt2": "///a/312", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/330", "nt2": "///a/311", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/331", "nt2": "///a/310", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///a/332", "nt2": "///a/345", "bp": "A-G", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///a/333", "nt2": "///a/344", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///a/334", "nt2": "///a/343", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///a/335", "nt2": "///a/342", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///a/336", "nt2": "///a/341", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///a/337", "nt2": "///a/340", "bp": "U+G", "name": "--", "Saenger": "--", "LW": "tSW", "DSSR": "tm+W" } ] }, { "index": 5, "num_stems": 0, "strand1": "GGGUGACUGGUCUUG", "strand2": "GACACUGACUAGGAG", "bp_type": "..|||||||||||..", "helix_form": "x.A.xAAAx.AAx.", "num_pairs": 15, "pairs": [ { "index": 1, "nt1": "///a/105", "nt2": "///a/325", "bp": "G+G", "name": "--", "Saenger": "--", "LW": "tWW", "DSSR": "tW+W" }, { "index": 2, "nt1": "///a/106", "nt2": "///a/309", "bp": "G-A", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/107", "nt2": "///a/308", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/108", "nt2": "///a/307", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/109", "nt2": "///a/306", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/283", "nt2": "///a/305", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/284", "nt2": "///a/304", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/285", "nt2": "///a/303", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/286", "nt2": "///a/302", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///a/287", "nt2": "///a/298", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///a/288", "nt2": "///a/297", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///a/289", "nt2": "///a/296", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///a/290", "nt2": "///a/295", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///a/559", "nt2": "///a/294", "bp": "U-A", "name": "--", "Saenger": "--", "LW": "cWS", "DSSR": "cW-m" }, { "index": 15, "nt1": "///a/560", "nt2": "///a/293", "bp": "G+G", "name": "--", "Saenger": "06-VI", "LW": "cHW", "DSSR": "cM+W" } ] }, { "index": 6, "num_stems": 0, "strand1": "ACGGUA", "strand2": "UGCCUG", "bp_type": ".|||..", "helix_form": "x.Axx", "num_pairs": 6, "pairs": [ { "index": 1, "nt1": "///a/113", "nt2": "///a/281", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 2, "nt1": "///a/234", "nt2": "///a/280", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/235", "nt2": "///a/279", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/236", "nt2": "///a/278", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/239", "nt2": "///a/277", "bp": "U-U", "name": "--", "Saenger": "16-XVI", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/240", "nt2": "///a/275", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" } ] }, { "index": 7, "num_stems": 0, "strand1": "GCCUAGGAUCUCUGGUAGUGUGGGGUCU", "strand2": "UGGAUCCGAGUGACUAUCGCACUCCAGG", "bp_type": "|||||||.||.||||||||||||||||.", "helix_form": ".AAA...x..xAA.....xAA...x..", "num_pairs": 28, "pairs": [ { "index": 1, "nt1": "///a/116", "nt2": "///a/233", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/117", "nt2": "///a/232", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/118", "nt2": "///a/231", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/119", "nt2": "///a/230", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/120", "nt2": "///a/229", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/121", "nt2": "///a/228", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/122", "nt2": "///a/227", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/123", "nt2": "///a/226", "bp": "A-G", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/125", "nt2": "///a/225", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///a/126", "nt2": "///a/224", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///a/127", "nt2": "///a/223", "bp": "U-U", "name": "--", "Saenger": "16-XVI", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///a/130", "nt2": "///a/221", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///a/131", "nt2": "///a/220", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///a/132", "nt2": "///a/219", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///a/133", "nt2": "///a/218", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///a/134", "nt2": "///a/217", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///a/135", "nt2": "///a/216", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///a/136", "nt2": "///a/215", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///a/137", "nt2": "///a/214", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///a/192", "nt2": "///a/213", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///a/193", "nt2": "///a/212", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 22, "nt1": "///a/194", "nt2": "///a/211", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 23, "nt1": "///a/195", "nt2": "///a/210", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 24, "nt1": "///a/196", "nt2": "///a/209", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 25, "nt1": "///a/197", "nt2": "///a/208", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 26, "nt1": "///a/200", "nt2": "///a/207", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 27, "nt1": "///a/201", "nt2": "///a/206", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 28, "nt1": "///a/202", "nt2": "///a/205", "bp": "U+G", "name": "--", "Saenger": "--", "LW": "tSW", "DSSR": "tm+W" } ] }, { "index": 8, "num_stems": 0, "strand1": "CGGGCCUAAACCGCAUCUCCU", "strand2": "GCCUGCAUAGGGGGAAGAGGG", "bp_type": "|||||.....||.|...|||.", "helix_form": "AA..xx..x....x.xx...", "num_pairs": 21, "pairs": [ { "index": 1, "nt1": "///a/157", "nt2": "///a/152", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/158", "nt2": "///a/151", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/159", "nt2": "///a/150", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/160", "nt2": "///a/149", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/161", "nt2": "///a/148", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/163", "nt2": "///a/147", "bp": "C-C", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/164", "nt2": "///a/145", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 8, "nt1": "///a/165", "nt2": "///a/144", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 9, "nt1": "///a/166", "nt2": "///a/143", "bp": "A-A", "name": "--", "Saenger": "05-V", "LW": "tHW", "DSSR": "tM-W" }, { "index": 10, "nt1": "///a/168", "nt2": "///a/142", "bp": "A-G", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///a/169", "nt2": "///a/141", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///a/170", "nt2": "///a/140", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///a/171", "nt2": "///a/139", "bp": "G+G", "name": "--", "Saenger": "06-VI", "LW": "cHW", "DSSR": "cM+W" }, { "index": 14, "nt1": "///a/172", "nt2": "///a/138", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///a/173", "nt2": "///a/190", "bp": "A-A", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" }, { "index": 16, "nt1": "///a/174", "nt2": "///a/189", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 17, "nt1": "///a/176", "nt2": "///a/188", "bp": "C+G", "name": "--", "Saenger": "--", "LW": "tWW", "DSSR": "tW+W" }, { "index": 18, "nt1": "///a/178", "nt2": "///a/187", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///a/179", "nt2": "///a/186", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///a/180", "nt2": "///a/185", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///a/181", "nt2": "///a/184", "bp": "U-G", "name": "~Sheared", "Saenger": "--", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 9, "num_stems": 0, "strand1": "GCU", "strand2": "CGG", "bp_type": "|||", "helix_form": "A.", "num_pairs": 3, "pairs": [ { "index": 1, "nt1": "///a/241", "nt2": "///a/271", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/242", "nt2": "///a/270", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/243", "nt2": "///a/269", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 10, "num_stems": 0, "strand1": "UUGGUGGGG", "strand2": "AACCAUCCG", "bp_type": "||||||||.", "helix_form": ".A.A...x", "num_pairs": 9, "pairs": [ { "index": 1, "nt1": "///a/246", "nt2": "///a/268", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/247", "nt2": "///a/267", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/248", "nt2": "///a/266", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/249", "nt2": "///a/265", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/250", "nt2": "///a/264", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/251", "nt2": "///a/263", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/252", "nt2": "///a/262", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/253", "nt2": "///a/261", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/254", "nt2": "///a/259", "bp": "G-G", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" } ] }, { "index": 11, "num_stems": 0, "strand1": "AGGUAGGACGGCGAGCACCCUUCGU", "strand2": "UCCAGCCUGCCGCUCGUGGGAAGCA", "bp_type": "||||.||||||||.||||||||||.", "helix_form": "..x.x.x.....xx....x....x", "num_pairs": 25, "pairs": [ { "index": 1, "nt1": "///a/365", "nt2": "///a/384", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/364", "nt2": "///a/385", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/363", "nt2": "///a/386", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/361", "nt2": "///a/387", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/360", "nt2": "///a/388", "bp": "A-G", "name": "--", "Saenger": "--", "LW": "cSW", "DSSR": "cm-W" }, { "index": 6, "nt1": "///a/46", "nt2": "///a/389", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/45", "nt2": "///a/390", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/44", "nt2": "///a/392", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/43", "nt2": "///a/393", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///a/42", "nt2": "///a/394", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///a/41", "nt2": "///a/395", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///a/40", "nt2": "///a/396", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///a/39", "nt2": "///a/397", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///a/493", "nt2": "///a/399", "bp": "A+U", "name": "Hoogsteen", "Saenger": "23-XXIII", "LW": "cHW", "DSSR": "cM+W" }, { "index": 15, "nt1": "///a/494", "nt2": "///a/539", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///a/495", "nt2": "///a/538", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///a/496", "nt2": "///a/537", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///a/497", "nt2": "///a/536", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///a/498", "nt2": "///a/535", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///a/505", "nt2": "///a/534", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///a/506", "nt2": "///a/533", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 22, "nt1": "///a/507", "nt2": "///a/532", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 23, "nt1": "///a/508", "nt2": "///a/531", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 24, "nt1": "///a/509", "nt2": "///a/530", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 25, "nt1": "///a/510", "nt2": "///a/527", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" } ] }, { "index": 12, "num_stems": 0, "strand1": "GGCG", "strand2": "CCGA", "bp_type": "|||.", "helix_form": "AA.", "num_pairs": 4, "pairs": [ { "index": 1, "nt1": "///a/371", "nt2": "///a/380", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/372", "nt2": "///a/379", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/373", "nt2": "///a/378", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/374", "nt2": "///a/377", "bp": "G-A", "name": "--", "Saenger": "--", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 13, "num_stems": 0, "strand1": "AGCGUUAAUCGGAGUAAUGAAUUGACGGGGCCCGACAAGCGGUG", "strand2": "UCGCAAUUAGACUCGGUACUAGACUGUUCCGGGCUGCCCGCUAA", "bp_type": ".|||||||||.||||..|||.|||||||||||||||..|||||.", "helix_form": "xAAAAx...xxAA.xxx....x.xA.x..AAA.x..xxAA...", "num_pairs": 44, "pairs": [ { "index": 1, "nt1": "///a/391", "nt2": "///a/37", "bp": "A+U", "name": "rWC", "Saenger": "21-XXI", "LW": "tWW", "DSSR": "tW+W" }, { "index": 2, "nt1": "///a/542", "nt2": "///a/36", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/543", "nt2": "///a/35", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/544", "nt2": "///a/34", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/545", "nt2": "///a/33", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/546", "nt2": "///a/32", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/547", "nt2": "///a/30", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/548", "nt2": "///a/29", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/549", "nt2": "///a/28", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///a/550", "nt2": "///a/27", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///a/552", "nt2": "///a/26", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 12, "nt1": "///a/9", "nt2": "///a/25", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///a/10", "nt2": "///a/24", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///a/11", "nt2": "///a/23", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///a/12", "nt2": "///a/22", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///a/908", "nt2": "///a/21", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 17, "nt1": "///a/909", "nt2": "///a/13", "bp": "A+U", "name": "Hoogsteen", "Saenger": "23-XXIII", "LW": "cHW", "DSSR": "cM+W" }, { "index": 18, "nt1": "///a/910", "nt2": "///a/19", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///a/911", "nt2": "///a/18", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///a/912", "nt2": "///a/17", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///a/913", "nt2": "///a/16", "bp": "A-A", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 22, "nt1": "///a/914", "nt2": "///a/15", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 23, "nt1": "///a/915", "nt2": "///a/1390", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 24, "nt1": "///a/916", "nt2": "///a/1389", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 25, "nt1": "///a/917", "nt2": "///a/1387", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 26, "nt1": "///a/918", "nt2": "///a/1386", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 27, "nt1": "///a/919", "nt2": "///a/1385", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 28, "nt1": "///a/921", "nt2": "///a/1384", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 29, "nt1": "///a/922", "nt2": "///a/1383", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 30, "nt1": "///a/923", "nt2": "///a/1382", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 31, "nt1": "///a/924", "nt2": "///a/1381", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 32, "nt1": "///a/925", "nt2": "///a/1380", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 33, "nt1": "///a/926", "nt2": "///a/1379", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 34, "nt1": "///a/927", "nt2": "///a/1378", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 35, "nt1": "///a/929", "nt2": "///a/1374", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 36, "nt1": "///a/930", "nt2": "///a/1373", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 37, "nt1": "///a/931", "nt2": "///a/1372", "bp": "A-C", "name": "~Sheared", "Saenger": "--", "LW": "tSH", "DSSR": "tm-M" }, { "index": 38, "nt1": "///a/932", "nt2": "///a/928", "bp": "A+C", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW+W" }, { "index": 39, "nt1": "///a/933", "nt2": "///a/1338", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 40, "nt1": "///a/934", "nt2": "///a/1337", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 41, "nt1": "///a/935", "nt2": "///a/1336", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 42, "nt1": "///a/936", "nt2": "///a/1335", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 43, "nt1": "///a/937", "nt2": "///a/1334", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 44, "nt1": "///a/938", "nt2": "///a/1333", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 14, "num_stems": 0, "strand1": "GGAUUGAAAGCACUU", "strand2": "UCUGGAAUGUGUGAA", "bp_type": ".||||....||||..", "helix_form": ".A...xxx..AAx.", "num_pairs": 15, "pairs": [ { "index": 1, "nt1": "///a/417", "nt2": "///a/414", "bp": "G+U", "name": "--", "Saenger": "--", "LW": "tWW", "DSSR": "tW+W" }, { "index": 2, "nt1": "///a/418", "nt2": "///a/413", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/419", "nt2": "///a/412", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/420", "nt2": "///a/411", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/421", "nt2": "///a/410", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/422", "nt2": "///a/409", "bp": "G-A", "name": "--", "Saenger": "--", "LW": "..W", "DSSR": "..-W" }, { "index": 7, "nt1": "///a/424", "nt2": "///a/405", "bp": "A-A", "name": "--", "Saenger": "--", "LW": "tHW", "DSSR": "tM-W" }, { "index": 8, "nt1": "///a/425", "nt2": "///a/423", "bp": "A+U", "name": "Hoogsteen", "Saenger": "23-XXIII", "LW": "cHW", "DSSR": "cM+W" }, { "index": 9, "nt1": "///a/426", "nt2": "///a/404", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 10, "nt1": "///a/427", "nt2": "///a/403", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///a/428", "nt2": "///a/402", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///a/429", "nt2": "///a/401", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///a/430", "nt2": "///a/400", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///a/431", "nt2": "///a/489", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 15, "nt1": "///a/432", "nt2": "///a/490", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" } ] }, { "index": 15, "num_stems": 0, "strand1": "UAGUUGGGAGG", "strand2": "AUCAACCAUGC", "bp_type": ".||||||...|", "helix_form": ".xAAAA..x.", "num_pairs": 11, "pairs": [ { "index": 1, "nt1": "///a/433", "nt2": "///a/492", "bp": "U-A", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/434", "nt2": "///a/491", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/436", "nt2": "///a/486", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/437", "nt2": "///a/485", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/438", "nt2": "///a/484", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/439", "nt2": "///a/483", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/440", "nt2": "///a/482", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/441", "nt2": "///a/481", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 9, "nt1": "///a/442", "nt2": "///a/480", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 10, "nt1": "///a/443", "nt2": "///a/478", "bp": "G+G", "name": "--", "Saenger": "03-III", "LW": "tWW", "DSSR": "tW+W" }, { "index": 11, "nt1": "///a/444", "nt2": "///a/477", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 16, "num_stems": 0, "strand1": "GGGCAGUAAGUU", "strand2": "UUUGUCGUUCAA", "bp_type": "||||||.|||..", "helix_form": "...AA..AAxx", "num_pairs": 12, "pairs": [ { "index": 1, "nt1": "///a/447", "nt2": "///a/473", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/448", "nt2": "///a/472", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/449", "nt2": "///a/471", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/450", "nt2": "///a/470", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/451", "nt2": "///a/469", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/452", "nt2": "///a/468", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/453", "nt2": "///a/467", "bp": "U+G", "name": "--", "Saenger": "--", "LW": "cWH", "DSSR": "cW+M" }, { "index": 8, "nt1": "///a/454", "nt2": "///a/466", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/455", "nt2": "///a/465", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///a/456", "nt2": "///a/464", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///a/457", "nt2": "///a/462", "bp": "U+A", "name": "rWC", "Saenger": "21-XXI", "LW": "tWW", "DSSR": "tW+W" }, { "index": 12, "nt1": "///a/458", "nt2": "///a/460", "bp": "U-A", "name": "--", "Saenger": "--", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 17, "num_stems": 0, "strand1": "AGCCGCG", "strand2": "UCGGCGA", "bp_type": ".|||||.", "helix_form": "xAAx..", "num_pairs": 7, "pairs": [ { "index": 1, "nt1": "///a/504", "nt2": "///a/502", "bp": "A+U", "name": "--", "Saenger": "--", "LW": "cHS", "DSSR": "cM+m" }, { "index": 2, "nt1": "///a/518", "nt2": "///a/501", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/519", "nt2": "///a/500", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/520", "nt2": "///a/499", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/521", "nt2": "///a/516", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/522", "nt2": "///a/515", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/523", "nt2": "///a/514", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 18, "num_stems": 0, "strand1": "AGGCGGUCGACU", "strand2": "UCCGCCAGCUGA", "bp_type": ".||||||||||.", "helix_form": "x..xxAAA..x", "num_pairs": 12, "pairs": [ { "index": 1, "nt1": "///a/557", "nt2": "///a/878", "bp": "A+U", "name": "rWC", "Saenger": "21-XXI", "LW": "tWW", "DSSR": "tW+W" }, { "index": 2, "nt1": "///a/561", "nt2": "///a/877", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/562", "nt2": "///a/876", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/563", "nt2": "///a/875", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/569", "nt2": "///a/874", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/815", "nt2": "///a/873", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/816", "nt2": "///a/872", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/817", "nt2": "///a/871", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/818", "nt2": "///a/870", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///a/819", "nt2": "///a/869", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///a/820", "nt2": "///a/868", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///a/821", "nt2": "///a/866", "bp": "U+A", "name": "rWC", "Saenger": "21-XXI", "LW": "tWW", "DSSR": "tW+W" } ] }, { "index": 19, "num_stems": 0, "strand1": "GU", "strand2": "CA", "bp_type": "||", "helix_form": "A", "num_pairs": 2, "pairs": [ { "index": 1, "nt1": "///a/564", "nt2": "///a/860", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/565", "nt2": "///a/859", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 20, "num_stems": 0, "strand1": "GCGCGAGGU", "strand2": "CGUGGGUCA", "bp_type": "||||..|||", "helix_form": "....x..A", "num_pairs": 9, "pairs": [ { "index": 1, "nt1": "///a/571", "nt2": "///a/758", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/572", "nt2": "///a/757", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/573", "nt2": "///a/756", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/574", "nt2": "///a/755", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/575", "nt2": "///a/754", "bp": "G-G", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" }, { "index": 6, "nt1": "///a/577", "nt2": "///a/752", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 7, "nt1": "///a/578", "nt2": "///a/751", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/579", "nt2": "///a/750", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/580", "nt2": "///a/749", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 21, "num_stems": 0, "strand1": "CCCCGGGC", "strand2": "AGGGUCCA", "bp_type": ".||||||.", "helix_form": ".AA..A.", "num_pairs": 8, "pairs": [ { "index": 1, "nt1": "///a/605", "nt2": "///a/623", "bp": "C-A", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/606", "nt2": "///a/622", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/607", "nt2": "///a/621", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/608", "nt2": "///a/620", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/609", "nt2": "///a/619", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/610", "nt2": "///a/618", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/611", "nt2": "///a/617", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/612", "nt2": "///a/616", "bp": "C-A", "name": "~rHoogsteen", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" } ] }, { "index": 22, "num_stems": 0, "strand1": "GCAUCCAACUACUGAGCUGAGUACGGUAGGGGUGGUGGAAUUUCCUGUGUA", "strand2": "UGUAGGUUGACGACUUGACUCAUGUCAGGUCCACCACAAGGAAGGAUAUAG", "bp_type": "||||||||||.||||||.|||||||||..||||||||....|||||||...", "helix_form": ".AAAAAAx.x.AAA..xxx...x.....x...AAAxA....AA.A.....", "num_pairs": 51, "pairs": [ { "index": 1, "nt1": "///a/627", "nt2": "///a/599", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/628", "nt2": "///a/598", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/629", "nt2": "///a/597", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/630", "nt2": "///a/596", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/631", "nt2": "///a/595", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/632", "nt2": "///a/594", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/633", "nt2": "///a/593", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/634", "nt2": "///a/592", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/637", "nt2": "///a/591", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///a/638", "nt2": "///a/590", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///a/639", "nt2": "///a/588", "bp": "A-C", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///a/640", "nt2": "///a/587", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///a/641", "nt2": "///a/586", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///a/642", "nt2": "///a/585", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///a/643", "nt2": "///a/584", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///a/644", "nt2": "///a/583", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///a/645", "nt2": "///a/582", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///a/646", "nt2": "///a/747", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 19, "nt1": "///a/648", "nt2": "///a/748", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///a/649", "nt2": "///a/745", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///a/650", "nt2": "///a/744", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 22, "nt1": "///a/651", "nt2": "///a/743", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 23, "nt1": "///a/652", "nt2": "///a/742", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 24, "nt1": "///a/653", "nt2": "///a/740", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 25, "nt1": "///a/654", "nt2": "///a/739", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 26, "nt1": "///a/655", "nt2": "///a/738", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 27, "nt1": "///a/656", "nt2": "///a/737", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 28, "nt1": "///a/657", "nt2": "///a/736", "bp": "A-G", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 29, "nt1": "///a/658", "nt2": "///a/735", "bp": "G-G", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 30, "nt1": "///a/660", "nt2": "///a/734", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 31, "nt1": "///a/661", "nt2": "///a/733", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 32, "nt1": "///a/662", "nt2": "///a/732", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 33, "nt1": "///a/663", "nt2": "///a/731", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 34, "nt1": "///a/664", "nt2": "///a/730", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 35, "nt1": "///a/665", "nt2": "///a/729", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 36, "nt1": "///a/666", "nt2": "///a/728", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 37, "nt1": "///a/667", "nt2": "///a/711", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 38, "nt1": "///a/668", "nt2": "///a/710", "bp": "G-A", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 39, "nt1": "///a/669", "nt2": "///a/709", "bp": "A-A", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 40, "nt1": "///a/670", "nt2": "///a/708", "bp": "A-G", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 41, "nt1": "///a/671", "nt2": "///a/707", "bp": "U-G", "name": "~Wobble", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 42, "nt1": "///a/672", "nt2": "///a/706", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 43, "nt1": "///a/673", "nt2": "///a/705", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 44, "nt1": "///a/674", "nt2": "///a/704", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 45, "nt1": "///a/675", "nt2": "///a/703", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 46, "nt1": "///a/676", "nt2": "///a/702", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 47, "nt1": "///a/677", "nt2": "///a/701", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 48, "nt1": "///a/678", "nt2": "///a/700", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 49, "nt1": "///a/679", "nt2": "///a/699", "bp": "G-U", "name": "--", "Saenger": "--", "LW": "t.H", "DSSR": "t.-M" }, { "index": 50, "nt1": "///a/680", "nt2": "///a/698", "bp": "U-A", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" }, { "index": 51, "nt1": "///a/681", "nt2": "///a/697", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" } ] }, { "index": 23, "num_stems": 0, "strand1": "GCGG", "strand2": "CGUA", "bp_type": "||..", "helix_form": "A..", "num_pairs": 4, "pairs": [ { "index": 1, "nt1": "///a/682", "nt2": "///a/693", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/683", "nt2": "///a/692", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/684", "nt2": "///a/691", "bp": "G-U", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" }, { "index": 4, "nt1": "///a/685", "nt2": "///a/690", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 24, "num_stems": 0, "strand1": "GGGCG", "strand2": "GACGG", "bp_type": "..||.", "helix_form": "xx..", "num_pairs": 5, "pairs": [ { "index": 1, "nt1": "///a/716", "nt2": "///a/727", "bp": "G+G", "name": "--", "Saenger": "--", "LW": "tWW", "DSSR": "tW+W" }, { "index": 2, "nt1": "///a/718", "nt2": "///a/659", "bp": "G+A", "name": "--", "Saenger": "09-IX", "LW": "cWH", "DSSR": "cW+M" }, { "index": 3, "nt1": "///a/719", "nt2": "///a/726", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/720", "nt2": "///a/725", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/721", "nt2": "///a/724", "bp": "G-G", "name": "--", "Saenger": "--", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 25, "num_stems": 0, "strand1": "AAGCGUGG", "strand2": "UCCGCACC", "bp_type": "..||||||", "helix_form": "x...AA.", "num_pairs": 8, "pairs": [ { "index": 1, "nt1": "///a/761", "nt2": "///a/807", "bp": "A-U", "name": "--", "Saenger": "--", "LW": "tHW", "DSSR": "tM-W" }, { "index": 2, "nt1": "///a/762", "nt2": "///a/805", "bp": "A-C", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/763", "nt2": "///a/804", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/764", "nt2": "///a/803", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/765", "nt2": "///a/802", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/766", "nt2": "///a/801", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/767", "nt2": "///a/800", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/768", "nt2": "///a/799", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 26, "num_stems": 0, "strand1": "GCAAACAGGAU", "strand2": "UGAUGGUCCCA", "bp_type": "||...||||..", "helix_form": "......A...", "num_pairs": 11, "pairs": [ { "index": 1, "nt1": "///a/772", "nt2": "///a/798", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/773", "nt2": "///a/797", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/774", "nt2": "///a/796", "bp": "A-A", "name": "~Sheared", "Saenger": "--", "LW": "tSH", "DSSR": "tm-M" }, { "index": 4, "nt1": "///a/775", "nt2": "///a/795", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 5, "nt1": "///a/776", "nt2": "///a/794", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 6, "nt1": "///a/777", "nt2": "///a/793", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/778", "nt2": "///a/792", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/779", "nt2": "///a/791", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/780", "nt2": "///a/790", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///a/781", "nt2": "///a/789", "bp": "A-C", "name": "--", "Saenger": "--", "LW": ".WH", "DSSR": ".W-M" }, { "index": 11, "nt1": "///a/782", "nt2": "///a/788", "bp": "U-A", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" } ] }, { "index": 27, "num_stems": 0, "strand1": "GAUCUAGUGGCGAGC", "strand2": "CUAGGUUGCCGAGCG", "bp_type": "||||.||||||..||", "helix_form": ".AA.x...AA.x.A", "num_pairs": 15, "pairs": [ { "index": 1, "nt1": "///a/840", "nt2": "///a/834", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/841", "nt2": "///a/833", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/842", "nt2": "///a/832", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/843", "nt2": "///a/831", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/844", "nt2": "///a/830", "bp": "U-G", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/846", "nt2": "///a/828", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/847", "nt2": "///a/827", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/848", "nt2": "///a/826", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/849", "nt2": "///a/825", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///a/850", "nt2": "///a/824", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///a/851", "nt2": "///a/823", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///a/852", "nt2": "///a/822", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 13, "nt1": "///a/854", "nt2": "///a/863", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 14, "nt1": "///a/855", "nt2": "///a/862", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///a/856", "nt2": "///a/861", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 28, "num_stems": 0, "strand1": "GGGGAUACGGCCG", "strand2": "CUCAAAAUUUGGA", "bp_type": "|||.....||||.", "helix_form": "....x.xx.AA.", "num_pairs": 13, "pairs": [ { "index": 1, "nt1": "///a/879", "nt2": "///a/906", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/880", "nt2": "///a/905", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/881", "nt2": "///a/904", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/882", "nt2": "///a/903", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 5, "nt1": "///a/883", "nt2": "///a/902", "bp": "A+A", "name": "--", "Saenger": "02-II", "LW": "tHH", "DSSR": "tM+M" }, { "index": 6, "nt1": "///a/885", "nt2": "///a/901", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 7, "nt1": "///a/886", "nt2": "///a/900", "bp": "A-A", "name": "~Sheared", "Saenger": "--", "LW": "tHS", "DSSR": "tM-m" }, { "index": 8, "nt1": "///a/887", "nt2": "///a/238", "bp": "C-U", "name": "--", "Saenger": "18-XVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/888", "nt2": "///a/899", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///a/889", "nt2": "///a/898", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///a/890", "nt2": "///a/897", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///a/891", "nt2": "///a/896", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///a/892", "nt2": "///a/895", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 29, "num_stems": 0, "strand1": "AUACCACGUGCUAC", "strand2": "UUUGGUGUACGAGG", "bp_type": "..||||||||||.|", "helix_form": ".x.x.....AA.x", "num_pairs": 14, "pairs": [ { "index": 1, "nt1": "///a/953", "nt2": "///a/951", "bp": "A-U", "name": "--", "Saenger": "--", "LW": "tHW", "DSSR": "tM-W" }, { "index": 2, "nt1": "///a/954", "nt2": "///a/950", "bp": "U+U", "name": "--", "Saenger": "13-XIII", "LW": "tWW", "DSSR": "tW+W" }, { "index": 3, "nt1": "///a/1219", "nt2": "///a/949", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/1220", "nt2": "///a/948", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/1222", "nt2": "///a/947", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/1223", "nt2": "///a/946", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/1224", "nt2": "///a/945", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/1225", "nt2": "///a/944", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/1226", "nt2": "///a/943", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///a/1227", "nt2": "///a/942", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///a/1228", "nt2": "///a/941", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///a/1229", "nt2": "///a/940", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///a/1230", "nt2": "///a/939", "bp": "A-G", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///a/1231", "nt2": "///a/1331", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 30, "num_stems": 0, "strand1": "UCG", "strand2": "AGC", "bp_type": ".||", "helix_form": "x.", "num_pairs": 3, "pairs": [ { "index": 1, "nt1": "///a/955", "nt2": "///a/1195", "bp": "U+A", "name": "--", "Saenger": "--", "LW": "tWW", "DSSR": "tW+W" }, { "index": 2, "nt1": "///a/956", "nt2": "///a/967", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/957", "nt2": "///a/966", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 31, "num_stems": 0, "strand1": "AAGACUGCGUGAAGAAG", "strand2": "AUCUGACGCUAGGCUAU", "bp_type": "..|||||||....|...", "helix_form": "xx.A.........xxx", "num_pairs": 17, "pairs": [ { "index": 1, "nt1": "///a/972", "nt2": "///a/1354", "bp": "A-A", "name": "--", "Saenger": "05-V", "LW": "tHW", "DSSR": "tM-W" }, { "index": 2, "nt1": "///a/1313", "nt2": "///a/1309", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 3, "nt1": "///a/1317", "nt2": "///a/1308", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/1318", "nt2": "///a/1307", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/1319", "nt2": "///a/1306", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/1320", "nt2": "///a/1305", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/1321", "nt2": "///a/1304", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/1322", "nt2": "///a/1303", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/1323", "nt2": "///a/1302", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///a/1324", "nt2": "///a/1301", "bp": "U-U", "name": "--", "Saenger": "16-XVI", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///a/1325", "nt2": "///a/1300", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 12, "nt1": "///a/1326", "nt2": "///a/1299", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 13, "nt1": "///a/1327", "nt2": "///a/1298", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 14, "nt1": "///a/1328", "nt2": "///a/1297", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///a/1232", "nt2": "///a/1295", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 16, "nt1": "///a/1233", "nt2": "///a/1293", "bp": "A+A", "name": "--", "Saenger": "--", "LW": "tHH", "DSSR": "tM+M" }, { "index": 17, "nt1": "///a/1291", "nt2": "///a/1292", "bp": "G+U", "name": "Platform", "Saenger": "--", "LW": "cSH", "DSSR": "cm+M" } ] }, { "index": 32, "num_stems": 0, "strand1": "CCUGGCC", "strand2": "GGACCGG", "bp_type": "|||||||", "helix_form": "......", "num_pairs": 7, "pairs": [ { "index": 1, "nt1": "///a/978", "nt2": "///a/1215", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/979", "nt2": "///a/1214", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/980", "nt2": "///a/1213", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/981", "nt2": "///a/1212", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/982", "nt2": "///a/1211", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/983", "nt2": "///a/1210", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/984", "nt2": "///a/1209", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 33, "num_stems": 0, "strand1": "ACU", "strand2": "GGU", "bp_type": ".|.", "helix_form": "..", "num_pairs": 3, "pairs": [ { "index": 1, "nt1": "///a/999", "nt2": "///a/1018", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 2, "nt1": "///a/1000", "nt2": "///a/1017", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/1001", "nt2": "///a/1016", "bp": "U-U", "name": "~Sheared", "Saenger": "--", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 34, "num_stems": 0, "strand1": "CCAG", "strand2": "GGUA", "bp_type": "|||.", "helix_form": "AA.", "num_pairs": 4, "pairs": [ { "index": 1, "nt1": "///a/1004", "nt2": "///a/1013", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/1005", "nt2": "///a/1012", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/1006", "nt2": "///a/1011", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/1007", "nt2": "///a/1010", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 35, "num_stems": 0, "strand1": "GGGAACUCAGCACAGGGCUAUGGCUGUCG", "strand2": "UCCGAGAGUCGUGUCCCGGUACUGACUGC", "bp_type": ".||..||||||||.|||||.||||||.|.", "helix_form": "...x...AAx.xx..x..x..xAAx...", "num_pairs": 29, "pairs": [ { "index": 1, "nt1": "///a/1026", "nt2": "///a/1023", "bp": "G+U", "name": "--", "Saenger": "--", "LW": "tW.", "DSSR": "tW+." }, { "index": 2, "nt1": "///a/1027", "nt2": "///a/1022", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/1028", "nt2": "///a/1021", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/1029", "nt2": "///a/1020", "bp": "A-G", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/1030", "nt2": "///a/998", "bp": "A+A", "name": "--", "Saenger": "--", "LW": "tWS", "DSSR": "tW+m" }, { "index": 6, "nt1": "///a/1031", "nt2": "///a/997", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/1032", "nt2": "///a/996", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/1033", "nt2": "///a/995", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/1034", "nt2": "///a/994", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///a/1035", "nt2": "///a/993", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///a/1037", "nt2": "///a/992", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///a/1038", "nt2": "///a/991", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///a/1039", "nt2": "///a/987", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///a/1040", "nt2": "///a/1205", "bp": "A-U", "name": "--", "Saenger": "--", "LW": "tH.", "DSSR": "tM-." }, { "index": 15, "nt1": "///a/1041", "nt2": "///a/1204", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///a/1042", "nt2": "///a/1203", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///a/1044", "nt2": "///a/1202", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///a/1045", "nt2": "///a/1201", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///a/1046", "nt2": "///a/1200", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///a/1049", "nt2": "///a/1199", "bp": "A-U", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///a/1050", "nt2": "///a/1198", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 22, "nt1": "///a/1051", "nt2": "///a/1197", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 23, "nt1": "///a/1052", "nt2": "///a/1193", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 24, "nt1": "///a/1053", "nt2": "///a/1192", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 25, "nt1": "///a/1054", "nt2": "///a/1191", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 26, "nt1": "///a/1055", "nt2": "///a/1189", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 27, "nt1": "///a/1056", "nt2": "///a/1188", "bp": "U-U", "name": "--", "Saenger": "16-XVI", "LW": "cWW", "DSSR": "cW-W" }, { "index": 28, "nt1": "///a/1057", "nt2": "///a/1187", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 29, "nt1": "///a/1058", "nt2": "///a/1186", "bp": "G+C", "name": "--", "Saenger": "--", "LW": "cW.", "DSSR": "cW+." } ] }, { "index": 36, "num_stems": 0, "strand1": "GCUCGUGUCG", "strand2": "CGAGCAUAGA", "bp_type": "||||||||..", "helix_form": "A.A..x...", "num_pairs": 10, "pairs": [ { "index": 1, "nt1": "///a/1062", "nt2": "///a/1101", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/1063", "nt2": "///a/1100", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/1064", "nt2": "///a/1099", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/1065", "nt2": "///a/1098", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/1066", "nt2": "///a/1097", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/1067", "nt2": "///a/1096", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/1068", "nt2": "///a/1077", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/1069", "nt2": "///a/1076", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/1070", "nt2": "///a/1075", "bp": "C+G", "name": "--", "Saenger": "--", "LW": "cWH", "DSSR": "cW+M" }, { "index": 10, "nt1": "///a/1071", "nt2": "///a/1074", "bp": "G-A", "name": "--", "Saenger": "--", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 37, "num_stems": 0, "strand1": "UGGGU", "strand2": "GCCCU", "bp_type": ".|||.", "helix_form": ".AA.", "num_pairs": 5, "pairs": [ { "index": 1, "nt1": "///a/1080", "nt2": "///a/1093", "bp": "U-G", "name": "sWobble", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/1081", "nt2": "///a/1092", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/1082", "nt2": "///a/1091", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/1083", "nt2": "///a/1090", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/1084", "nt2": "///a/1089", "bp": "U-U", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 38, "num_stems": 0, "strand1": "CCUU", "strand2": "GGGG", "bp_type": "||||", "helix_form": "A..", "num_pairs": 4, "pairs": [ { "index": 1, "nt1": "///a/1107", "nt2": "///a/1181", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/1108", "nt2": "///a/1180", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/1109", "nt2": "///a/1179", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/1110", "nt2": "///a/1178", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 39, "num_stems": 0, "strand1": "CCGCACC", "strand2": "GGGGUGG", "bp_type": "||.|||.", "helix_form": "Axx..x", "num_pairs": 7, "pairs": [ { "index": 1, "nt1": "///a/1122", "nt2": "///a/1138", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/1123", "nt2": "///a/1137", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/1125", "nt2": "///a/1133", "bp": "G-G", "name": "--", "Saenger": "--", "LW": "tH.", "DSSR": "tM-." }, { "index": 4, "nt1": "///a/1126", "nt2": "///a/1136", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/1127", "nt2": "///a/1135", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/1128", "nt2": "///a/1134", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/1129", "nt2": "///a/1132", "bp": "C+G", "name": "--", "Saenger": "--", "LW": "tSW", "DSSR": "tm+W" } ] }, { "index": 40, "num_stems": 0, "strand1": "AAGGAG", "strand2": "UUCCUA", "bp_type": "|||||.", "helix_form": ".A.Ax", "num_pairs": 6, "pairs": [ { "index": 1, "nt1": "///a/1145", "nt2": "///a/1116", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/1146", "nt2": "///a/1115", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/1147", "nt2": "///a/1114", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/1148", "nt2": "///a/1113", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/1149", "nt2": "///a/1112", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/1150", "nt2": "///a/1173", "bp": "G+A", "name": "--", "Saenger": "10-X", "LW": "tSW", "DSSR": "tm+W" } ] }, { "index": 41, "num_stems": 0, "strand1": "AGGCCGGUG", "strand2": "GGAGGCCAA", "bp_type": "...|||||.", "helix_form": "xx..AA.x", "num_pairs": 9, "pairs": [ { "index": 1, "nt1": "///a/1151", "nt2": "///a/1172", "bp": "A+G", "name": "--", "Saenger": "10-X", "LW": "tWS", "DSSR": "tW+m" }, { "index": 2, "nt1": "///a/1175", "nt2": "///a/1171", "bp": "G-G", "name": "~rHoogsteen", "Saenger": "07-VII", "LW": "tHW", "DSSR": "tM-W" }, { "index": 3, "nt1": "///a/1154", "nt2": "///a/1170", "bp": "G-A", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/1155", "nt2": "///a/1169", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/1156", "nt2": "///a/1168", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/1157", "nt2": "///a/1167", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/1158", "nt2": "///a/1166", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/1159", "nt2": "///a/1165", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/1160", "nt2": "///a/1163", "bp": "G-A", "name": "--", "Saenger": "--", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 42, "num_stems": 0, "strand1": "GGUCGGAC", "strand2": "CUAGCCAA", "bp_type": "||||||..", "helix_form": "..AA.x.", "num_pairs": 8, "pairs": [ { "index": 1, "nt1": "///a/1235", "nt2": "///a/1290", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/1236", "nt2": "///a/1289", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/1237", "nt2": "///a/1288", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/1238", "nt2": "///a/1287", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/1239", "nt2": "///a/1286", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/1240", "nt2": "///a/1285", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/1242", "nt2": "///a/1283", "bp": "A-A", "name": "~rHoogsteen", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" }, { "index": 8, "nt1": "///a/1243", "nt2": "///a/1282", "bp": "C-A", "name": "~rHoogsteen", "Saenger": "25-XXV", "LW": "tWH", "DSSR": "tW-M" } ] }, { "index": 43, "num_stems": 0, "strand1": "AGGG", "strand2": "ACCC", "bp_type": ".|||", "helix_form": "..A", "num_pairs": 4, "pairs": [ { "index": 1, "nt1": "///a/1246", "nt2": "///a/1279", "bp": "A+A", "name": "--", "Saenger": "01-I", "LW": "tWW", "DSSR": "tW+W" }, { "index": 2, "nt1": "///a/1247", "nt2": "///a/1278", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/1248", "nt2": "///a/1277", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/1249", "nt2": "///a/1276", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 44, "num_stems": 0, "strand1": "GCAAGCCG", "strand2": "CGGGUGGA", "bp_type": "||..|.|.", "helix_form": ".x.....", "num_pairs": 8, "pairs": [ { "index": 1, "nt1": "///a/1252", "nt2": "///a/1271", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/1253", "nt2": "///a/1270", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/1255", "nt2": "///a/1268", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 4, "nt1": "///a/1256", "nt2": "///a/1267", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 5, "nt1": "///a/1257", "nt2": "///a/1266", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/1258", "nt2": "///a/1265", "bp": "C-G", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/1259", "nt2": "///a/1264", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/1260", "nt2": "///a/1263", "bp": "G-A", "name": "--", "Saenger": "--", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 45, "num_stems": 0, "strand1": "UAUAAUCGUGAAU", "strand2": "UAAGUGGCACUGA", "bp_type": "....|||||||..", "helix_form": ".x....AA...x", "num_pairs": 13, "pairs": [ { "index": 1, "nt1": "///a/1339", "nt2": "///a/1370", "bp": "U+U", "name": "--", "Saenger": "13-XIII", "LW": "tWW", "DSSR": "tW+W" }, { "index": 2, "nt1": "///a/1340", "nt2": "///a/1369", "bp": "A+A", "name": "--", "Saenger": "02-II", "LW": "tHH", "DSSR": "tM+M" }, { "index": 3, "nt1": "///a/1342", "nt2": "///a/1368", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 4, "nt1": "///a/1343", "nt2": "///a/1367", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 5, "nt1": "///a/1344", "nt2": "///a/1366", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/1345", "nt2": "///a/1365", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/1346", "nt2": "///a/1364", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/1347", "nt2": "///a/1363", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/1348", "nt2": "///a/1362", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///a/1349", "nt2": "///a/1361", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///a/1350", "nt2": "///a/1360", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///a/1351", "nt2": "///a/1359", "bp": "A-G", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///a/1352", "nt2": "///a/1357", "bp": "U+A", "name": "rWC", "Saenger": "21-XXI", "LW": "tWW", "DSSR": "tW+W" } ] }, { "index": 46, "num_stems": 0, "strand1": "AGGGGACGGUUACCACGGAGUGAUUCAUGACUGGGGUGGUCGAACCG", "strand2": "GCCUCUGUCGAUGAGACCUCGUUGGGUGAGGGUACCACCUGCUCGGA", "bp_type": ".||||||||||||...||||||||||||..|||.|||||.||..||.", "helix_form": "..x...x...AAx...A.............A..AAA.x..Axx.xx", "num_pairs": 47, "pairs": [ { "index": 1, "nt1": "///a/1447", "nt2": "///a/1444", "bp": "A+G", "name": "--", "Saenger": "--", "LW": "tWS", "DSSR": "tW+m" }, { "index": 2, "nt1": "///a/1448", "nt2": "///a/1443", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/1449", "nt2": "///a/1442", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/1451", "nt2": "///a/1439", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/1452", "nt2": "///a/1438", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/1453", "nt2": "///a/1437", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/1454", "nt2": "///a/1436", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/1455", "nt2": "///a/1434", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/1456", "nt2": "///a/1433", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///a/1457", "nt2": "///a/1432", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///a/1458", "nt2": "///a/1431", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///a/1459", "nt2": "///a/1430", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///a/1460", "nt2": "///a/1429", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///a/1461", "nt2": "///a/1427", "bp": "C-A", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" }, { "index": 15, "nt1": "///a/1462", "nt2": "///a/1426", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 16, "nt1": "///a/1463", "nt2": "///a/1425", "bp": "C-A", "name": "~Sheared", "Saenger": "--", "LW": "tHS", "DSSR": "tM-m" }, { "index": 17, "nt1": "///a/1464", "nt2": "///a/1424", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///a/1465", "nt2": "///a/1423", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///a/1466", "nt2": "///a/1422", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///a/1467", "nt2": "///a/1421", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///a/1468", "nt2": "///a/1420", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 22, "nt1": "///a/1469", "nt2": "///a/1419", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 23, "nt1": "///a/1470", "nt2": "///a/1418", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 24, "nt1": "///a/1471", "nt2": "///a/1417", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 25, "nt1": "///a/1472", "nt2": "///a/1416", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 26, "nt1": "///a/1473", "nt2": "///a/1415", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 27, "nt1": "///a/1474", "nt2": "///a/1414", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 28, "nt1": "///a/1475", "nt2": "///a/1413", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 29, "nt1": "///a/1476", "nt2": "///a/1412", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 30, "nt1": "///a/1477", "nt2": "///a/1411", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 31, "nt1": "///a/1478", "nt2": "///a/1410", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 32, "nt1": "///a/1479", "nt2": "///a/1409", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 33, "nt1": "///a/1480", "nt2": "///a/1408", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 34, "nt1": "///a/1481", "nt2": "///a/1407", "bp": "G-A", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 35, "nt1": "///a/1482", "nt2": "///a/1406", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 36, "nt1": "///a/1483", "nt2": "///a/1405", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 37, "nt1": "///a/1484", "nt2": "///a/1404", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 38, "nt1": "///a/1485", "nt2": "///a/1403", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 39, "nt1": "///a/1488", "nt2": "///a/1401", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 40, "nt1": "///a/1489", "nt2": "///a/1400", "bp": "U-U", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 41, "nt1": "///a/1490", "nt2": "///a/1399", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 42, "nt1": "///a/1491", "nt2": "///a/1398", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 43, "nt1": "///a/1493", "nt2": "///a/1492", "bp": "A+U", "name": "Platform", "Saenger": "--", "LW": "cHS", "DSSR": "cM+m" }, { "index": 44, "nt1": "///a/1494", "nt2": "///a/1396", "bp": "A-C", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 45, "nt1": "///a/1495", "nt2": "///a/1395", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 46, "nt1": "///a/1393", "nt2": "///a/1498", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 47, "nt1": "///a/1499", "nt2": "///a/1496", "bp": "G+A", "name": "--", "Saenger": "--", "LW": "cWH", "DSSR": "cW+M" } ] }, { "index": 47, "num_stems": 0, "strand1": "AGCCGUAGG", "strand2": "UCGGCGUCC", "bp_type": "|||||||||", "helix_form": "A.AA..AA", "num_pairs": 9, "pairs": [ { "index": 1, "nt1": "///a/1501", "nt2": "///a/1522", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///a/1502", "nt2": "///a/1521", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///a/1503", "nt2": "///a/1520", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///a/1504", "nt2": "///a/1519", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///a/1505", "nt2": "///a/1518", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///a/1506", "nt2": "///a/1517", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///a/1507", "nt2": "///a/1516", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///a/1508", "nt2": "///a/1515", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///a/1509", "nt2": "///a/1514", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 48, "num_stems": 0, "strand1": "UCAAGU", "strand2": "CGUUCG", "bp_type": ".|||||", "helix_form": "xAAAA", "num_pairs": 6, "pairs": [ { "index": 1, "nt1": "///A/3", "nt2": "///A/2888", "bp": "U-C", "name": "--", "Saenger": "--", "LW": "cW.", "DSSR": "cW-." }, { "index": 2, "nt1": "///A/4", "nt2": "///A/2886", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/5", "nt2": "///A/2885", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/6", "nt2": "///A/2884", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/7", "nt2": "///A/2883", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/8", "nt2": "///A/2882", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 49, "num_stems": 0, "strand1": "AGCGCAUACGGUGGAUGCCUAGGCAGUCAGAGACCAGGGGAACUG", "strand2": "AUGCGUAUGCCAAAGUCGGAACCGUCAGUCUCGGGUCCCAUAAUC", "bp_type": ".||||||||||.....|||..|||||||||||.||||||.....|", "helix_form": "xAAAAAAA.A......x.xxx.x..AAA.x.x.x..AA..x...", "num_pairs": 45, "pairs": [ { "index": 1, "nt1": "///A/14", "nt2": "///A/13", "bp": "A+A", "name": "Platform", "Saenger": "--", "LW": "cHS", "DSSR": "cM+m" }, { "index": 2, "nt1": "///A/15", "nt2": "///A/516", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/16", "nt2": "///A/515", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/17", "nt2": "///A/514", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/18", "nt2": "///A/513", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/19", "nt2": "///A/512", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/20", "nt2": "///A/511", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/21", "nt2": "///A/510", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/22", "nt2": "///A/509", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/23", "nt2": "///A/508", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/24", "nt2": "///A/507", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/25", "nt2": "///A/506", "bp": "U-A", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" }, { "index": 13, "nt1": "///A/26", "nt2": "///A/505", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 14, "nt1": "///A/27", "nt2": "///A/504", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 15, "nt1": "///A/28", "nt2": "///A/503", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 16, "nt1": "///A/29", "nt2": "///A/502", "bp": "U-U", "name": "--", "Saenger": "16-XVI", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/30", "nt2": "///A/501", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///A/31", "nt2": "///A/465", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///A/32", "nt2": "///A/464", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///A/33", "nt2": "///A/438", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 21, "nt1": "///A/445", "nt2": "///A/440", "bp": "A-A", "name": "--", "Saenger": "05-V", "LW": "tHW", "DSSR": "tM-W" }, { "index": 22, "nt1": "///A/35", "nt2": "///A/436", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 23, "nt1": "///A/36", "nt2": "///A/435", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 24, "nt1": "///A/37", "nt2": "///A/433", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 25, "nt1": "///A/38", "nt2": "///A/432", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 26, "nt1": "///A/39", "nt2": "///A/431", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 27, "nt1": "///A/40", "nt2": "///A/430", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 28, "nt1": "///A/41", "nt2": "///A/429", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 29, "nt1": "///A/42", "nt2": "///A/428", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 30, "nt1": "///A/43", "nt2": "///A/427", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 31, "nt1": "///A/44", "nt2": "///A/425", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 32, "nt1": "///A/45", "nt2": "///A/424", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 33, "nt1": "///A/182", "nt2": "///A/215", "bp": "A-G", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 34, "nt1": "///A/183", "nt2": "///A/214", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 35, "nt1": "///A/184", "nt2": "///A/212", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 36, "nt1": "///A/185", "nt2": "///A/211", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 37, "nt1": "///A/186", "nt2": "///A/210", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 38, "nt1": "///A/187", "nt2": "///A/209", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 39, "nt1": "///A/188", "nt2": "///A/208", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 40, "nt1": "///A/189", "nt2": "///A/207", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 41, "nt1": "///A/190", "nt2": "///A/206", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 42, "nt1": "///A/191", "nt2": "///A/204", "bp": "A+A", "name": "--", "Saenger": "02-II", "LW": "tHH", "DSSR": "tM+M" }, { "index": 43, "nt1": "///A/192", "nt2": "///A/203", "bp": "C-A", "name": "~Sheared", "Saenger": "--", "LW": "tHS", "DSSR": "tM-m" }, { "index": 44, "nt1": "///A/193", "nt2": "///A/202", "bp": "U-U", "name": "--", "Saenger": "16-XVI", "LW": "cWW", "DSSR": "cW-W" }, { "index": 45, "nt1": "///A/194", "nt2": "///A/201", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 50, "num_stems": 0, "strand1": "GC", "strand2": "CG", "bp_type": "||", "helix_form": "A", "num_pairs": 2, "pairs": [ { "index": 1, "nt1": "///A/46", "nt2": "///A/179", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/47", "nt2": "///A/178", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 51, "num_stems": 0, "strand1": "GCUUCGGG", "strand2": "UGAGGCCU", "bp_type": "|||||||.", "helix_form": "x.AAA..", "num_pairs": 8, "pairs": [ { "index": 1, "nt1": "///A/75", "nt2": "///A/112", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/76", "nt2": "///A/110", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/77", "nt2": "///A/109", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/78", "nt2": "///A/108", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/79", "nt2": "///A/107", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/80", "nt2": "///A/106", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/81", "nt2": "///A/105", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/82", "nt2": "///A/104", "bp": "G-U", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" } ] }, { "index": 52, "num_stems": 0, "strand1": "GUCGUAGCCUGCGUCUGAAUAUCUUGUACUGAA", "strand2": "CAGCAACGGAUGCAGAAAGAGAGAACGUGGAUA", "bp_type": "|||||.|||.||||||.....|||||||||...", "helix_form": "A.x.x.AAxx..x...x.xx.AA....A....", "num_pairs": 33, "pairs": [ { "index": 1, "nt1": "///A/85", "nt2": "///A/98", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/86", "nt2": "///A/97", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/87", "nt2": "///A/96", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/61", "nt2": "///A/94", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/62", "nt2": "///A/93", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/63", "nt2": "///A/91", "bp": "A-A", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" }, { "index": 7, "nt1": "///A/64", "nt2": "///A/90", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/65", "nt2": "///A/89", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/66", "nt2": "///A/88", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/67", "nt2": "///A/74", "bp": "U+A", "name": "Hoogsteen", "Saenger": "23-XXIII", "LW": "cWH", "DSSR": "cW+M" }, { "index": 11, "nt1": "///A/68", "nt2": "///A/59", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/69", "nt2": "///A/58", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/70", "nt2": "///A/57", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/114", "nt2": "///A/56", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/115", "nt2": "///A/55", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///A/116", "nt2": "///A/54", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/117", "nt2": "///A/53", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 18, "nt1": "///A/119", "nt2": "///A/52", "bp": "A+A", "name": "--", "Saenger": "02-II", "LW": "tHH", "DSSR": "tM+M" }, { "index": 19, "nt1": "///A/118", "nt2": "///A/51", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 20, "nt1": "///A/120", "nt2": "///A/49", "bp": "U+A", "name": "Hoogsteen", "Saenger": "23-XXIII", "LW": "cWH", "DSSR": "cW+M" }, { "index": 21, "nt1": "///A/149", "nt2": "///A/177", "bp": "A+G", "name": "--", "Saenger": "--", "LW": "cWH", "DSSR": "cW+M" }, { "index": 22, "nt1": "///A/150", "nt2": "///A/176", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 23, "nt1": "///A/151", "nt2": "///A/175", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 24, "nt1": "///A/152", "nt2": "///A/174", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 25, "nt1": "///A/153", "nt2": "///A/173", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 26, "nt1": "///A/154", "nt2": "///A/172", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 27, "nt1": "///A/155", "nt2": "///A/171", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 28, "nt1": "///A/156", "nt2": "///A/170", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 29, "nt1": "///A/157", "nt2": "///A/169", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 30, "nt1": "///A/158", "nt2": "///A/168", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 31, "nt1": "///A/159", "nt2": "///A/167", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 32, "nt1": "///A/160", "nt2": "///A/166", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 33, "nt1": "///A/161", "nt2": "///A/165", "bp": "A-A", "name": "--", "Saenger": "05-V", "LW": "tHW", "DSSR": "tM-W" } ] }, { "index": 53, "num_stems": 0, "strand1": "CCCACCUAGG", "strand2": "GGGUGGAUCC", "bp_type": "||||||||||", "helix_form": "AAxA..AAA", "num_pairs": 10, "pairs": [ { "index": 1, "nt1": "///A/128", "nt2": "///A/123", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/129", "nt2": "///A/122", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/130", "nt2": "///A/121", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/131", "nt2": "///A/148", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/132", "nt2": "///A/147", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/133", "nt2": "///A/146", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/134", "nt2": "///A/145", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/135", "nt2": "///A/144", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/136", "nt2": "///A/143", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/137", "nt2": "///A/142", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 54, "num_stems": 0, "strand1": "UCA", "strand2": "AGC", "bp_type": "||.", "helix_form": "A.", "num_pairs": 3, "pairs": [ { "index": 1, "nt1": "///A/224", "nt2": "///A/231", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/225", "nt2": "///A/230", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/226", "nt2": "///A/229", "bp": "A-C", "name": "--", "Saenger": "--", "LW": "tSW", "DSSR": "tm-W" } ] }, { "index": 55, "num_stems": 0, "strand1": "GGAGCGAACGGGGAAAGAGCCC", "strand2": "CUGUGAUAUUCCCUUAAUCGGA", "bp_type": "|..||....|||||....|||.", "helix_form": "xx....x...A..xxx.x..x", "num_pairs": 22, "pairs": [ { "index": 1, "nt1": "///A/248", "nt2": "///A/198", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/250", "nt2": "///A/200", "bp": "G+U", "name": "rWobble", "Saenger": "27-XXVII", "LW": "tWW", "DSSR": "tW+W" }, { "index": 3, "nt1": "///A/251", "nt2": "///A/247", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 4, "nt1": "///A/252", "nt2": "///A/246", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/253", "nt2": "///A/245", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/254", "nt2": "///A/244", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 7, "nt1": "///A/255", "nt2": "///A/243", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 8, "nt1": "///A/256", "nt2": "///A/241", "bp": "A+A", "name": "--", "Saenger": "02-II", "LW": "tHH", "DSSR": "tM+M" }, { "index": 9, "nt1": "///A/257", "nt2": "///A/240", "bp": "C-U", "name": "--", "Saenger": "--", "LW": "tH.", "DSSR": "tM-." }, { "index": 10, "nt1": "///A/258", "nt2": "///A/239", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/259", "nt2": "///A/238", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/260", "nt2": "///A/237", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/261", "nt2": "///A/236", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/262", "nt2": "///A/235", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/421", "nt2": "///A/234", "bp": "A+U", "name": "rWC", "Saenger": "21-XXI", "LW": "tWW", "DSSR": "tW+W" }, { "index": 16, "nt1": "///A/233", "nt2": "///A/420", "bp": "A+A", "name": "--", "Saenger": "01-I", "LW": "tWW", "DSSR": "tW+W" }, { "index": 17, "nt1": "///A/220", "nt2": "///A/419", "bp": "G-A", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" }, { "index": 18, "nt1": "///A/221", "nt2": "///A/418", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 19, "nt1": "///A/266", "nt2": "///A/417", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///A/267", "nt2": "///A/416", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///A/268", "nt2": "///A/415", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 22, "nt1": "///A/269", "nt2": "///A/361", "bp": "C-A", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 56, "num_stems": 0, "strand1": "UAAGCUUCAGAUUUUA", "strand2": "AAGUGAAGUCUAGGAA", "bp_type": "...||||||||||||.", "helix_form": "....A.A.x..A..x", "num_pairs": 16, "pairs": [ { "index": 1, "nt1": "///A/271", "nt2": "///A/357", "bp": "U-A", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" }, { "index": 2, "nt1": "///A/272", "nt2": "///A/356", "bp": "A+A", "name": "--", "Saenger": "02-II", "LW": "tHH", "DSSR": "tM+M" }, { "index": 3, "nt1": "///A/273", "nt2": "///A/355", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 4, "nt1": "///A/274", "nt2": "///A/354", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/275", "nt2": "///A/353", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/276", "nt2": "///A/352", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/277", "nt2": "///A/351", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/278", "nt2": "///A/350", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/279", "nt2": "///A/349", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/282", "nt2": "///A/346", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/283", "nt2": "///A/345", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/284", "nt2": "///A/344", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/285", "nt2": "///A/343", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/286", "nt2": "///A/342", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/287", "nt2": "///A/341", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///A/339", "nt2": "///A/340", "bp": "A-A", "name": "Platform", "Saenger": "--", "LW": "cSW", "DSSR": "cm-W" } ] }, { "index": 57, "num_stems": 0, "strand1": "GCGGAAGGGU", "strand2": "CGCAUGCCCA", "bp_type": "|||...|||.", "helix_form": "AA.xxxA.x", "num_pairs": 10, "pairs": [ { "index": 1, "nt1": "///A/289", "nt2": "///A/337", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/290", "nt2": "///A/336", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/291", "nt2": "///A/335", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/292", "nt2": "///A/334", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 5, "nt1": "///A/316", "nt2": "///A/333", "bp": "A-U", "name": "--", "Saenger": "--", "LW": "cSW", "DSSR": "cm-W" }, { "index": 6, "nt1": "///A/293", "nt2": "///A/332", "bp": "A+G", "name": "--", "Saenger": "--", "LW": ".W.", "DSSR": ".W+." }, { "index": 7, "nt1": "///A/319", "nt2": "///A/331", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/320", "nt2": "///A/330", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/321", "nt2": "///A/329", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/322", "nt2": "///A/326", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" } ] }, { "index": 58, "num_stems": 0, "strand1": "GGCCGCUCUGGA", "strand2": "CCGGCGUGAAGA", "bp_type": "||||||.|....", "helix_form": "x.x.A..xx.x", "num_pairs": 12, "pairs": [ { "index": 1, "nt1": "///A/317", "nt2": "///A/313", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/327", "nt2": "///A/312", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/328", "nt2": "///A/311", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/295", "nt2": "///A/310", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/296", "nt2": "///A/309", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/297", "nt2": "///A/308", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/298", "nt2": "///A/307", "bp": "U-U", "name": "--", "Saenger": "16-XVI", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/299", "nt2": "///A/306", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/300", "nt2": "///A/304", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 10, "nt1": "///A/301", "nt2": "///A/324", "bp": "G+A", "name": "--", "Saenger": "10-X", "LW": "tSW", "DSSR": "tm+W" }, { "index": 11, "nt1": "///A/302", "nt2": "///A/323", "bp": "G+G", "name": "--", "Saenger": "04-IV", "LW": "tSS", "DSSR": "tm+m" }, { "index": 12, "nt1": "///A/492", "nt2": "///A/468", "bp": "A+A", "name": "--", "Saenger": "02-II", "LW": "tHH", "DSSR": "tM+M" } ] }, { "index": 59, "num_stems": 0, "strand1": "GGGGGAUGGAGGGCCAUCGCCG", "strand2": "CCUCCUACCGUCUGGUGGCUAG", "bp_type": ".||||||||.|||||||||...", "helix_form": "...Ax.AAx..x......xxx", "num_pairs": 22, "pairs": [ { "index": 1, "nt1": "///A/397", "nt2": "///A/412", "bp": "G+C", "name": "--", "Saenger": "--", "LW": "cHW", "DSSR": "cM+W" }, { "index": 2, "nt1": "///A/398", "nt2": "///A/411", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/399", "nt2": "///A/410", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/400", "nt2": "///A/409", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/401", "nt2": "///A/408", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/2394", "nt2": "///A/407", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/2395", "nt2": "///A/406", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/2396", "nt2": "///A/405", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/2397", "nt2": "///A/404", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/2399", "nt2": "///A/2392", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 11, "nt1": "///A/2400", "nt2": "///A/2391", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/2401", "nt2": "///A/2390", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/2402", "nt2": "///A/2388", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/2403", "nt2": "///A/2387", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/2404", "nt2": "///A/2386", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///A/2405", "nt2": "///A/2385", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/2406", "nt2": "///A/2384", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///A/2407", "nt2": "///A/2383", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///A/2408", "nt2": "///A/2382", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///A/2409", "nt2": "///A/2380", "bp": "C-U", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" }, { "index": 21, "nt1": "///A/2411", "nt2": "///A/2379", "bp": "C-A", "name": "~rHoogsteen", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" }, { "index": 22, "nt1": "///A/2416", "nt2": "///A/2378", "bp": "G+G", "name": "--", "Saenger": "04-IV", "LW": "tSS", "DSSR": "tm+m" } ] }, { "index": 60, "num_stems": 0, "strand1": "GACUUUGUCUGAA", "strand2": "CCGAGGCAGGAUA", "bp_type": "|.||||||||...", "helix_form": "x.....AA...x", "num_pairs": 13, "pairs": [ { "index": 1, "nt1": "///A/402", "nt2": "///A/376", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/382", "nt2": "///A/374", "bp": "A-C", "name": "--", "Saenger": "--", "LW": ".HW", "DSSR": ".M-W" }, { "index": 3, "nt1": "///A/383", "nt2": "///A/373", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/384", "nt2": "///A/372", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/385", "nt2": "///A/371", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/386", "nt2": "///A/370", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/387", "nt2": "///A/369", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/388", "nt2": "///A/368", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/389", "nt2": "///A/367", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/390", "nt2": "///A/366", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/391", "nt2": "///A/365", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 12, "nt1": "///A/392", "nt2": "///A/364", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 13, "nt1": "///A/393", "nt2": "///A/414", "bp": "A-A", "name": "--", "Saenger": "--", "LW": "c.W", "DSSR": "c.-W" } ] }, { "index": 61, "num_stems": 0, "strand1": "AUACCG", "strand2": "AAGGGA", "bp_type": "...||.", "helix_form": "x..A.", "num_pairs": 6, "pairs": [ { "index": 1, "nt1": "///A/448", "nt2": "///A/462", "bp": "A+A", "name": "--", "Saenger": "02-II", "LW": "tHH", "DSSR": "tM+M" }, { "index": 2, "nt1": "///A/450", "nt2": "///A/461", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 3, "nt1": "///A/451", "nt2": "///A/460", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 4, "nt1": "///A/452", "nt2": "///A/459", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/453", "nt2": "///A/458", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/454", "nt2": "///A/457", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 62, "num_stems": 0, "strand1": "AAG", "strand2": "ACC", "bp_type": "..|", "helix_form": "xx", "num_pairs": 3, "pairs": [ { "index": 1, "nt1": "///A/471", "nt2": "///A/496", "bp": "A+A", "name": "--", "Saenger": "01-I", "LW": "tWW", "DSSR": "tW+W" }, { "index": 2, "nt1": "///A/470", "nt2": "///A/466", "bp": "A-C", "name": "~rHoogsteen", "Saenger": "--", "LW": "tHW", "DSSR": "tM-W" }, { "index": 3, "nt1": "///A/472", "nt2": "///A/500", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 63, "num_stems": 0, "strand1": "AGGGGAGU", "strand2": "GCCCCAGA", "bp_type": ".||||...", "helix_form": ".A..xxx", "num_pairs": 8, "pairs": [ { "index": 1, "nt1": "///A/483", "nt2": "///A/479", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 2, "nt1": "///A/484", "nt2": "///A/478", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/485", "nt2": "///A/477", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/486", "nt2": "///A/476", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/487", "nt2": "///A/475", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/488", "nt2": "///A/473", "bp": "A-A", "name": "--", "Saenger": "--", "LW": "cWS", "DSSR": "cW-m" }, { "index": 7, "nt1": "///A/489", "nt2": "///A/497", "bp": "G-G", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" }, { "index": 8, "nt1": "///A/490", "nt2": "///A/494", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" } ] }, { "index": 64, "num_stems": 0, "strand1": "ACGCUGU", "strand2": "UGUGACA", "bp_type": ".||||||", "helix_form": "x..A.x", "num_pairs": 7, "pairs": [ { "index": 1, "nt1": "///A/520", "nt2": "///A/2028", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 2, "nt1": "///A/2010", "nt2": "///A/2027", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/2011", "nt2": "///A/2026", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/2012", "nt2": "///A/2025", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/2013", "nt2": "///A/2024", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/2014", "nt2": "///A/2023", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/552", "nt2": "///A/2020", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 65, "num_stems": 0, "strand1": "GUGGGAGCCUA", "strand2": "CGUCAGUGGAG", "bp_type": "||||..||||.", "helix_form": "......AAAx", "num_pairs": 11, "pairs": [ { "index": 1, "nt1": "///A/524", "nt2": "///A/550", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/525", "nt2": "///A/549", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/526", "nt2": "///A/548", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/527", "nt2": "///A/547", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/528", "nt2": "///A/546", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 6, "nt1": "///A/529", "nt2": "///A/545", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 7, "nt1": "///A/530", "nt2": "///A/544", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/531", "nt2": "///A/543", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/532", "nt2": "///A/542", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/533", "nt2": "///A/541", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/534", "nt2": "///A/538", "bp": "A-G", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 66, "num_stems": 0, "strand1": "CCCCGAAACCGGGCGAGUG", "strand2": "UGGUCUAAGGCUCGCUCGA", "bp_type": ".||.|...||||||||||.", "helix_form": "xAA.x.x.A....xxA.x", "num_pairs": 19, "pairs": [ { "index": 1, "nt1": "///A/577", "nt2": "///A/800", "bp": "C+U", "name": "--", "Saenger": "--", "LW": "cHW", "DSSR": "cM+W" }, { "index": 2, "nt1": "///A/661", "nt2": "///A/799", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/662", "nt2": "///A/798", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/663", "nt2": "///A/797", "bp": "C-U", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/664", "nt2": "///A/796", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/665", "nt2": "///A/793", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 7, "nt1": "///A/666", "nt2": "///A/792", "bp": "A-A", "name": "--", "Saenger": "05-V", "LW": "tHW", "DSSR": "tM-W" }, { "index": 8, "nt1": "///A/667", "nt2": "///A/790", "bp": "A+A", "name": "--", "Saenger": "01-I", "LW": "tWW", "DSSR": "tW+W" }, { "index": 9, "nt1": "///A/668", "nt2": "///A/789", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/669", "nt2": "///A/788", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/670", "nt2": "///A/787", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/671", "nt2": "///A/786", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/672", "nt2": "///A/785", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/673", "nt2": "///A/784", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/765", "nt2": "///A/781", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///A/767", "nt2": "///A/777", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/768", "nt2": "///A/776", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///A/769", "nt2": "///A/775", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///A/770", "nt2": "///A/773", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 67, "num_stems": 0, "strand1": "UUAUAUUCAGUGGC", "strand2": "AAUAUGGGUCGCUG", "bp_type": ".|||||||||||||", "helix_form": "x.A....AA....", "num_pairs": 14, "pairs": [ { "index": 1, "nt1": "///A/578", "nt2": "///A/660", "bp": "U+A", "name": "--", "Saenger": "--", "LW": "tWS", "DSSR": "tW+m" }, { "index": 2, "nt1": "///A/579", "nt2": "///A/658", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/580", "nt2": "///A/657", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/581", "nt2": "///A/656", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/582", "nt2": "///A/655", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/583", "nt2": "///A/654", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/584", "nt2": "///A/653", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/585", "nt2": "///A/652", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/586", "nt2": "///A/651", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/587", "nt2": "///A/650", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/588", "nt2": "///A/649", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/589", "nt2": "///A/648", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/590", "nt2": "///A/647", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/591", "nt2": "///A/646", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 68, "num_stems": 0, "strand1": "AGCUUACCG", "strand2": "GCGGAGGGA", "bp_type": ".|||..||.", "helix_form": ".A..x.A.", "num_pairs": 9, "pairs": [ { "index": 1, "nt1": "///A/593", "nt2": "///A/615", "bp": "A+G", "name": "Linker", "Saenger": "--", "LW": "tWS", "DSSR": "tW+m" }, { "index": 2, "nt1": "///A/594", "nt2": "///A/614", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/595", "nt2": "///A/613", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/596", "nt2": "///A/612", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/597", "nt2": "///A/611", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 6, "nt1": "///A/599", "nt2": "///A/609", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 7, "nt1": "///A/600", "nt2": "///A/608", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/601", "nt2": "///A/607", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/602", "nt2": "///A/606", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 69, "num_stems": 0, "strand1": "GCG", "strand2": "CGA", "bp_type": "||.", "helix_form": "A.", "num_pairs": 3, "pairs": [ { "index": 1, "nt1": "///A/618", "nt2": "///A/625", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/619", "nt2": "///A/624", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/620", "nt2": "///A/623", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 70, "num_stems": 0, "strand1": "GUCU", "strand2": "CGGG", "bp_type": "||||", "helix_form": "..A", "num_pairs": 4, "pairs": [ { "index": 1, "nt1": "///A/628", "nt2": "///A/640", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/629", "nt2": "///A/639", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/630", "nt2": "///A/638", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/631", "nt2": "///A/637", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 71, "num_stems": 0, "strand1": "CUAUCCAUGAGC", "strand2": "AAUAGGUGUUCG", "bp_type": "..||||||||||", "helix_form": "xxA...A...x", "num_pairs": 12, "pairs": [ { "index": 1, "nt1": "///A/677", "nt2": "///A/1767", "bp": "C-A", "name": "--", "Saenger": "--", "LW": "cSW", "DSSR": "cm-W" }, { "index": 2, "nt1": "///A/678", "nt2": "///A/675", "bp": "U+A", "name": "--", "Saenger": "--", "LW": "tWS", "DSSR": "tW+m" }, { "index": 3, "nt1": "///A/679", "nt2": "///A/763", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/680", "nt2": "///A/762", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/681", "nt2": "///A/761", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/682", "nt2": "///A/760", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/683", "nt2": "///A/759", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/684", "nt2": "///A/758", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/685", "nt2": "///A/757", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/686", "nt2": "///A/756", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/687", "nt2": "///A/755", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/688", "nt2": "///A/753", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 72, "num_stems": 0, "strand1": "CUGACUGGAGACCGACCCCUCCCGU", "strand2": "GAUUGGAAGUUGGAAGGGGAUGGAG", "bp_type": "||||||...||||..|||||.||..", "helix_form": "...A.....x.A.x.A.xA.AAxx", "num_pairs": 25, "pairs": [ { "index": 1, "nt1": "///A/709", "nt2": "///A/702", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/710", "nt2": "///A/701", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/711", "nt2": "///A/700", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/712", "nt2": "///A/699", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/713", "nt2": "///A/698", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/714", "nt2": "///A/697", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/715", "nt2": "///A/696", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 8, "nt1": "///A/716", "nt2": "///A/695", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 9, "nt1": "///A/717", "nt2": "///A/694", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 10, "nt1": "///A/718", "nt2": "///A/693", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/720", "nt2": "///A/692", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/721", "nt2": "///A/691", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/722", "nt2": "///A/690", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/723", "nt2": "///A/689", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 15, "nt1": "///A/725", "nt2": "///A/751", "bp": "A-A", "name": "~Sheared", "Saenger": "--", "LW": "tHS", "DSSR": "tM-m" }, { "index": 16, "nt1": "///A/726", "nt2": "///A/750", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/727", "nt2": "///A/749", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///A/728", "nt2": "///A/748", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///A/730", "nt2": "///A/747", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///A/731", "nt2": "///A/746", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///A/732", "nt2": "///A/745", "bp": "C-U", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 22, "nt1": "///A/733", "nt2": "///A/744", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 23, "nt1": "///A/734", "nt2": "///A/743", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 24, "nt1": "///A/735", "nt2": "///A/740", "bp": "G+A", "name": "--", "Saenger": "10-X", "LW": "tSW", "DSSR": "tm+W" }, { "index": 25, "nt1": "///A/736", "nt2": "///A/738", "bp": "U-G", "name": "--", "Saenger": "--", "LW": ".SS", "DSSR": ".m-m" } ] }, { "index": 73, "num_stems": 0, "strand1": "GCUAU", "strand2": "CGAUG", "bp_type": "|||||", "helix_form": "AAA.", "num_pairs": 5, "pairs": [ { "index": 1, "nt1": "///A/812", "nt2": "///A/825", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/813", "nt2": "///A/824", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/814", "nt2": "///A/823", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/815", "nt2": "///A/822", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/816", "nt2": "///A/821", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 74, "num_stems": 0, "strand1": "CCUCAUGUAUCACUCUGGGGGAUAGAGUGUUCGGCUAGG", "strand2": "GGGGUACGGAGUGAGACCCAUAAGCUCACGAGCCAAACC", "bp_type": "||||||||..|||||||||.....|||.||||||...||", "helix_form": "x......x.x..xAA.A...xx..x.x..xAAA.....", "num_pairs": 39, "pairs": [ { "index": 1, "nt1": "///A/827", "nt2": "///A/932", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/828", "nt2": "///A/930", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/829", "nt2": "///A/929", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/830", "nt2": "///A/928", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/831", "nt2": "///A/927", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/832", "nt2": "///A/926", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/833", "nt2": "///A/925", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/834", "nt2": "///A/924", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/835", "nt2": "///A/922", "bp": "A-G", "name": "--", "Saenger": "--", "LW": ".WW", "DSSR": ".W-W" }, { "index": 10, "nt1": "///A/836", "nt2": "///A/923", "bp": "U-A", "name": "--", "Saenger": "--", "LW": "cHH", "DSSR": "cM-M" }, { "index": 11, "nt1": "///A/837", "nt2": "///A/919", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/838", "nt2": "///A/918", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/839", "nt2": "///A/917", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/840", "nt2": "///A/915", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/841", "nt2": "///A/914", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///A/842", "nt2": "///A/913", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/843", "nt2": "///A/912", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///A/844", "nt2": "///A/911", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///A/845", "nt2": "///A/910", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///A/846", "nt2": "///A/909", "bp": "G-A", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///A/847", "nt2": "///A/908", "bp": "G-U", "name": "--", "Saenger": "--", "LW": "cW.", "DSSR": "cW-." }, { "index": 22, "nt1": "///A/2255", "nt2": "///A/907", "bp": "A+A", "name": "--", "Saenger": "02-II", "LW": "tHH", "DSSR": "tM+M" }, { "index": 23, "nt1": "///A/849", "nt2": "///A/906", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 24, "nt1": "///A/850", "nt2": "///A/905", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 25, "nt1": "///A/851", "nt2": "///A/904", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 26, "nt1": "///A/852", "nt2": "///A/902", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 27, "nt1": "///A/853", "nt2": "///A/901", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 28, "nt1": "///A/857", "nt2": "///A/898", "bp": "U+A", "name": "--", "Saenger": "--", "LW": "cWH", "DSSR": "cW+M" }, { "index": 29, "nt1": "///A/858", "nt2": "///A/897", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 30, "nt1": "///A/859", "nt2": "///A/896", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 31, "nt1": "///A/861", "nt2": "///A/894", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 32, "nt1": "///A/862", "nt2": "///A/893", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 33, "nt1": "///A/863", "nt2": "///A/892", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 34, "nt1": "///A/864", "nt2": "///A/891", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 35, "nt1": "///A/865", "nt2": "///A/890", "bp": "C-A", "name": "~Wobble", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 36, "nt1": "///A/866", "nt2": "///A/889", "bp": "U-A", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" }, { "index": 37, "nt1": "///A/867", "nt2": "///A/888", "bp": "A-A", "name": "~Sheared", "Saenger": "--", "LW": "tHS", "DSSR": "tM-m" }, { "index": 38, "nt1": "///A/868", "nt2": "///A/887", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 39, "nt1": "///A/869", "nt2": "///A/886", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 75, "num_stems": 0, "strand1": "GC", "strand2": "CG", "bp_type": "||", "helix_form": "x", "num_pairs": 2, "pairs": [ { "index": 1, "nt1": "///A/872", "nt2": "///A/882", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/874", "nt2": "///A/880", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 76, "num_stems": 0, "strand1": "AGUCCGUCGUGAAUAGAGGAGCGUUCUGUGCC", "strand2": "GUGGGCGGCACAAAGCUCCUCGUAAGACUUGG", "bp_type": ".||||||||||....|||||||.|||||.|||", "helix_form": "x...A..AAAx.x..AA.A.x.x...A.x.A", "num_pairs": 32, "pairs": [ { "index": 1, "nt1": "///A/950", "nt2": "///A/946", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 2, "nt1": "///A/952", "nt2": "///A/945", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/953", "nt2": "///A/944", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/954", "nt2": "///A/943", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/955", "nt2": "///A/942", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/956", "nt2": "///A/941", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/957", "nt2": "///A/940", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/958", "nt2": "///A/939", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/959", "nt2": "///A/938", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/960", "nt2": "///A/937", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/961", "nt2": "///A/936", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/962", "nt2": "///A/811", "bp": "A-A", "name": "~Sheared", "Saenger": "--", "LW": "tSH", "DSSR": "tm-M" }, { "index": 13, "nt1": "///A/963", "nt2": "///A/810", "bp": "A+A", "name": "--", "Saenger": "02-II", "LW": "tHH", "DSSR": "tM+M" }, { "index": 14, "nt1": "///A/1175", "nt2": "///A/809", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 15, "nt1": "///A/1176", "nt2": "///A/808", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 16, "nt1": "///A/1177", "nt2": "///A/807", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/1178", "nt2": "///A/806", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///A/1179", "nt2": "///A/805", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///A/1180", "nt2": "///A/804", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///A/1181", "nt2": "///A/803", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///A/1182", "nt2": "///A/802", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 22, "nt1": "///A/1183", "nt2": "///A/1237", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 23, "nt1": "///A/1184", "nt2": "///A/1236", "bp": "G-U", "name": "--", "Saenger": "--", "LW": "cW.", "DSSR": "cW-." }, { "index": 24, "nt1": "///A/1185", "nt2": "///A/1234", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 25, "nt1": "///A/1186", "nt2": "///A/1233", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 26, "nt1": "///A/1187", "nt2": "///A/1232", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 27, "nt1": "///A/1188", "nt2": "///A/1231", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 28, "nt1": "///A/1189", "nt2": "///A/1230", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 29, "nt1": "///A/1190", "nt2": "///A/1229", "bp": "U-U", "name": "--", "Saenger": "16-XVI", "LW": "cWW", "DSSR": "cW-W" }, { "index": 30, "nt1": "///A/1193", "nt2": "///A/1227", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 31, "nt1": "///A/1194", "nt2": "///A/1226", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 32, "nt1": "///A/1195", "nt2": "///A/1225", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 77, "num_stems": 0, "strand1": "AAGGG", "strand2": "AGCCC", "bp_type": "..|||", "helix_form": ".x.A", "num_pairs": 5, "pairs": [ { "index": 1, "nt1": "///A/964", "nt2": "///A/980", "bp": "A+A", "name": "--", "Saenger": "--", "LW": "tHH", "DSSR": "tM+M" }, { "index": 2, "nt1": "///A/965", "nt2": "///A/979", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 3, "nt1": "///A/966", "nt2": "///A/977", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/967", "nt2": "///A/976", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/968", "nt2": "///A/975", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 78, "num_stems": 0, "strand1": "UGGCCC", "strand2": "ACGGGG", "bp_type": ".|.|||", "helix_form": "x.x.A", "num_pairs": 6, "pairs": [ { "index": 1, "nt1": "///A/1013", "nt2": "///A/1133", "bp": "U+A", "name": "--", "Saenger": "--", "LW": "t.W", "DSSR": "t.+W" }, { "index": 2, "nt1": "///A/1014", "nt2": "///A/1130", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1015", "nt2": "///A/1129", "bp": "G+G", "name": "--", "Saenger": "--", "LW": "tWW", "DSSR": "tW+W" }, { "index": 4, "nt1": "///A/995", "nt2": "///A/1128", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/996", "nt2": "///A/1127", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/997", "nt2": "///A/1126", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 79, "num_stems": 0, "strand1": "AACGAGUGGGAAGGC", "strand2": "AGGCGCGUCCGGCUG", "bp_type": "..||.|||||..|||", "helix_form": "....x...A.....", "num_pairs": 15, "pairs": [ { "index": 1, "nt1": "///A/1018", "nt2": "///A/1116", "bp": "A+A", "name": "--", "Saenger": "02-II", "LW": "tHH", "DSSR": "tM+M" }, { "index": 2, "nt1": "///A/1019", "nt2": "///A/1115", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 3, "nt1": "///A/1020", "nt2": "///A/1114", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1021", "nt2": "///A/1113", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1022", "nt2": "///A/1112", "bp": "A-G", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1024", "nt2": "///A/1111", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/1025", "nt2": "///A/1110", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1026", "nt2": "///A/1109", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/1027", "nt2": "///A/1108", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/1028", "nt2": "///A/1107", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/1029", "nt2": "///A/1106", "bp": "A-G", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/1030", "nt2": "///A/1105", "bp": "A-G", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/1031", "nt2": "///A/1104", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/1032", "nt2": "///A/1103", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/1033", "nt2": "///A/1102", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 80, "num_stems": 0, "strand1": "GACGCUAGGGAGC", "strand2": "AGGUGAUCACUCG", "bp_type": "..||||||.||.|", "helix_form": ".xx.....xx..", "num_pairs": 13, "pairs": [ { "index": 1, "nt1": "///A/1037", "nt2": "///A/1101", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 2, "nt1": "///A/1038", "nt2": "///A/1100", "bp": "A-G", "name": "--", "Saenger": "--", "LW": "tHW", "DSSR": "tM-W" }, { "index": 3, "nt1": "///A/1039", "nt2": "///A/2738", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1041", "nt2": "///A/1098", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1042", "nt2": "///A/1097", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1043", "nt2": "///A/1096", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/1044", "nt2": "///A/1095", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1045", "nt2": "///A/1094", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/1046", "nt2": "///A/1093", "bp": "G-A", "name": "--", "Saenger": "--", "LW": "tSW", "DSSR": "tm-W" }, { "index": 10, "nt1": "///A/1077", "nt2": "///A/1092", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/1080", "nt2": "///A/1091", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/1081", "nt2": "///A/1090", "bp": "G-C", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/1082", "nt2": "///A/1089", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 81, "num_stems": 0, "strand1": "AG", "strand2": "UC", "bp_type": "||", "helix_form": ".", "num_pairs": 2, "pairs": [ { "index": 1, "nt1": "///A/1047", "nt2": "///A/1071", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/1048", "nt2": "///A/1070", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 82, "num_stems": 0, "strand1": "GGC", "strand2": "CCG", "bp_type": "|||", "helix_form": "..", "num_pairs": 3, "pairs": [ { "index": 1, "nt1": "///A/1052", "nt2": "///A/1066", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/1053", "nt2": "///A/1065", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1054", "nt2": "///A/1064", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 83, "num_stems": 0, "strand1": "ACCACACACCGAGCUGCGGGUGUCC", "strand2": "UGGUGUGUGGAUCGACGCCCGCAGU", "bp_type": "||||||||||..||||||||||||.", "helix_form": "AA...xxA..xxAAxA..x...Ax", "num_pairs": 25, "pairs": [ { "index": 1, "nt1": "///A/1135", "nt2": "///A/1008", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/1136", "nt2": "///A/1007", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1137", "nt2": "///A/1006", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1138", "nt2": "///A/1005", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1139", "nt2": "///A/1004", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1140", "nt2": "///A/1003", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/1141", "nt2": "///A/1001", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1142", "nt2": "///A/994", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/1143", "nt2": "///A/993", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/1144", "nt2": "///A/992", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/1145", "nt2": "///A/991", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 12, "nt1": "///A/1146", "nt2": "///A/989", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 13, "nt1": "///A/1148", "nt2": "///A/988", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/1149", "nt2": "///A/987", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/1150", "nt2": "///A/986", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///A/1151", "nt2": "///A/984", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/1152", "nt2": "///A/983", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///A/1153", "nt2": "///A/982", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///A/1154", "nt2": "///A/981", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///A/1155", "nt2": "///A/1172", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///A/1156", "nt2": "///A/1171", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 22, "nt1": "///A/1157", "nt2": "///A/1170", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 23, "nt1": "///A/1158", "nt2": "///A/1169", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 24, "nt1": "///A/1159", "nt2": "///A/1168", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 25, "nt1": "///A/1161", "nt2": "///A/1167", "bp": "C-U", "name": "--", "Saenger": "18-XVIII", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 84, "num_stems": 0, "strand1": "GAAGGUGAGUUG", "strand2": "AGGUCGUUCGAA", "bp_type": "...||||||||.", "helix_form": ".......A...", "num_pairs": 12, "pairs": [ { "index": 1, "nt1": "///A/1199", "nt2": "///A/1224", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 2, "nt1": "///A/1200", "nt2": "///A/1223", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 3, "nt1": "///A/1201", "nt2": "///A/1222", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 4, "nt1": "///A/1202", "nt2": "///A/1221", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1203", "nt2": "///A/1220", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1204", "nt2": "///A/1219", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/1205", "nt2": "///A/1218", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1206", "nt2": "///A/1217", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/1207", "nt2": "///A/1216", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/1208", "nt2": "///A/1215", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/1209", "nt2": "///A/1214", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/1210", "nt2": "///A/1213", "bp": "G-A", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" } ] }, { "index": 85, "num_stems": 0, "strand1": "CAGCUGACAUGAU", "strand2": "AGCGACUGUUAAA", "bp_type": "..|||||||....", "helix_form": "xxAAAAAx...x", "num_pairs": 13, "pairs": [ { "index": 1, "nt1": "///A/1238", "nt2": "///A/576", "bp": "C-A", "name": "~rHoogsteen", "Saenger": "25-XXV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 2, "nt1": "///A/1241", "nt2": "///A/575", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 3, "nt1": "///A/1243", "nt2": "///A/574", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1244", "nt2": "///A/573", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1245", "nt2": "///A/572", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1246", "nt2": "///A/571", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/1247", "nt2": "///A/570", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1248", "nt2": "///A/569", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/1249", "nt2": "///A/2004", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/1250", "nt2": "///A/2003", "bp": "U+U", "name": "--", "Saenger": "--", "LW": "cWH", "DSSR": "cW+M" }, { "index": 11, "nt1": "///A/1251", "nt2": "///A/2002", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 12, "nt1": "///A/1252", "nt2": "///A/2001", "bp": "A+A", "name": "--", "Saenger": "02-II", "LW": "tHH", "DSSR": "tM+M" }, { "index": 13, "nt1": "///A/2600", "nt2": "///A/2000", "bp": "U+A", "name": "rWC", "Saenger": "21-XXI", "LW": "tWW", "DSSR": "tW+W" } ] }, { "index": 86, "num_stems": 0, "strand1": "UAACUGAGACUCGGGUGGAGAAGGCCGCUGCG", "strand2": "GGUGACUCAGAGCCCACCUCUUCCGGCGGUGC", "bp_type": "..||||||.||||||||.|||.||||||||||", "helix_form": "x.Ax.A..x.A..AAAxxAxxxxAAAA..xA", "num_pairs": 32, "pairs": [ { "index": 1, "nt1": "///A/1254", "nt2": "///A/1253", "bp": "U+G", "name": "Platform", "Saenger": "--", "LW": "cHS", "DSSR": "cM+m" }, { "index": 2, "nt1": "///A/1255", "nt2": "///A/1999", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 3, "nt1": "///A/1256", "nt2": "///A/1998", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1257", "nt2": "///A/1997", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1638", "nt2": "///A/1996", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1639", "nt2": "///A/1995", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/1640", "nt2": "///A/1994", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1641", "nt2": "///A/1993", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/1642", "nt2": "///A/1992", "bp": "A-A", "name": "--", "Saenger": "--", "LW": "cWH", "DSSR": "cW-M" }, { "index": 10, "nt1": "///A/1646", "nt2": "///A/1991", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/1647", "nt2": "///A/1990", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/1648", "nt2": "///A/1989", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/1649", "nt2": "///A/1988", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/1650", "nt2": "///A/1987", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/1651", "nt2": "///A/1986", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///A/1652", "nt2": "///A/1985", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/1653", "nt2": "///A/1984", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///A/1979", "nt2": "///A/1983", "bp": "G-C", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///A/1655", "nt2": "///A/1982", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///A/1656", "nt2": "///A/1981", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///A/1659", "nt2": "///A/1980", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 22, "nt1": "///A/1658", "nt2": "///A/1978", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 23, "nt1": "///A/1664", "nt2": "///A/1977", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 24, "nt1": "///A/1751", "nt2": "///A/1975", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 25, "nt1": "///A/1752", "nt2": "///A/1974", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 26, "nt1": "///A/1753", "nt2": "///A/1973", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 27, "nt1": "///A/1754", "nt2": "///A/1972", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 28, "nt1": "///A/1755", "nt2": "///A/1971", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 29, "nt1": "///A/1756", "nt2": "///A/1970", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 30, "nt1": "///A/1757", "nt2": "///A/1969", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 31, "nt1": "///A/1758", "nt2": "///A/1967", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 32, "nt1": "///A/1759", "nt2": "///A/1966", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 87, "num_stems": 0, "strand1": "AGACCACC", "strand2": "GCUGGUGG", "bp_type": ".||||.||", "helix_form": "x.AAxxA", "num_pairs": 8, "pairs": [ { "index": 1, "nt1": "///A/1288", "nt2": "///A/1616", "bp": "A+G", "name": "--", "Saenger": "--", "LW": "tWS", "DSSR": "tW+m" }, { "index": 2, "nt1": "///A/1290", "nt2": "///A/1615", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1291", "nt2": "///A/1614", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1292", "nt2": "///A/1613", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1293", "nt2": "///A/1612", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1598", "nt2": "///A/1611", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 7, "nt1": "///A/1601", "nt2": "///A/1610", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1602", "nt2": "///A/1609", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 88, "num_stems": 0, "strand1": "GGAU", "strand2": "CCUU", "bp_type": "|||.", "helix_form": "Axx", "num_pairs": 4, "pairs": [ { "index": 1, "nt1": "///A/1296", "nt2": "///A/1595", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/1297", "nt2": "///A/1594", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1593", "nt2": "///A/1300", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1327", "nt2": "///A/1299", "bp": "U-U", "name": "Calcutta", "Saenger": "--", "LW": ".HW", "DSSR": ".M-W" } ] }, { "index": 89, "num_stems": 0, "strand1": "CCUGCGCGU", "strand2": "GGACGCGCA", "bp_type": "||||||||.", "helix_form": ".AAA.x.x", "num_pairs": 9, "pairs": [ { "index": 1, "nt1": "///A/1301", "nt2": "///A/1325", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/1302", "nt2": "///A/1324", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1303", "nt2": "///A/1323", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1304", "nt2": "///A/1322", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1305", "nt2": "///A/1321", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1306", "nt2": "///A/1320", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/1310", "nt2": "///A/1318", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1311", "nt2": "///A/1317", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/1637", "nt2": "///A/1315", "bp": "U+A", "name": "--", "Saenger": "--", "LW": "tWW", "DSSR": "tW+W" } ] }, { "index": 90, "num_stems": 0, "strand1": "UACACCCACGCCGGGUAG", "strand2": "GUGUGGGUGCGGACCAUA", "bp_type": "..||||||||||.||||.", "helix_form": "xx...AAxAAA.x.AA.", "num_pairs": 18, "pairs": [ { "index": 1, "nt1": "///A/1316", "nt2": "///A/1270", "bp": "U-G", "name": "--", "Saenger": "--", "LW": "cWS", "DSSR": "cW-m" }, { "index": 2, "nt1": "///A/1273", "nt2": "///A/1269", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 3, "nt1": "///A/1276", "nt2": "///A/1268", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1277", "nt2": "///A/1267", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1278", "nt2": "///A/1266", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1279", "nt2": "///A/1265", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/1280", "nt2": "///A/1264", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1281", "nt2": "///A/1263", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/1282", "nt2": "///A/1635", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/1283", "nt2": "///A/1634", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/1284", "nt2": "///A/1633", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/1285", "nt2": "///A/1632", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/1286", "nt2": "///A/1631", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 14, "nt1": "///A/1617", "nt2": "///A/1629", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/1618", "nt2": "///A/1628", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///A/1619", "nt2": "///A/1627", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/1620", "nt2": "///A/1626", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///A/1621", "nt2": "///A/1625", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 91, "num_stems": 0, "strand1": "ACGGU", "strand2": "UGCCA", "bp_type": ".|||.", "helix_form": "x...", "num_pairs": 5, "pairs": [ { "index": 1, "nt1": "///A/1329", "nt2": "///A/1592", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 2, "nt1": "///A/1332", "nt2": "///A/1591", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1333", "nt2": "///A/1590", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1334", "nt2": "///A/1589", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1335", "nt2": "///A/1588", "bp": "U-A", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 92, "num_stems": 0, "strand1": "CCUAAGGCGAGCGGAUCGAGGAGGACUUUGAGCCGCGGGUGGG", "strand2": "GGAUGCUGAUCGCCUGGCUCAUCUUGGAGUUCGACGUCCACCA", "bp_type": "||.|.|||...|||||||||..||||||||||..||.||||..", "helix_form": "Ax.x.....xxA....xAA.xx..A.......xx.xx.A...", "num_pairs": 43, "pairs": [ { "index": 1, "nt1": "///A/1337", "nt2": "///A/1368", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/1338", "nt2": "///A/1367", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1339", "nt2": "///A/1365", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 4, "nt1": "///A/1340", "nt2": "///A/1366", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1341", "nt2": "///A/1364", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 6, "nt1": "///A/1342", "nt2": "///A/1363", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/1343", "nt2": "///A/1362", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1344", "nt2": "///A/1361", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/1345", "nt2": "///A/1360", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 10, "nt1": "///A/1346", "nt2": "///A/1359", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 11, "nt1": "///A/1347", "nt2": "///A/2201", "bp": "G+C", "name": "rWC", "Saenger": "22-XXII", "LW": "tWW", "DSSR": "tW+W" }, { "index": 12, "nt1": "///A/2202", "nt2": "///A/2196", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/2203", "nt2": "///A/2195", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/2204", "nt2": "///A/2194", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/2205", "nt2": "///A/2193", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///A/2206", "nt2": "///A/2192", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/2207", "nt2": "///A/2191", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///A/2208", "nt2": "///A/2189", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///A/2209", "nt2": "///A/2188", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///A/2210", "nt2": "///A/2187", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///A/2211", "nt2": "///A/2186", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 22, "nt1": "///A/2212", "nt2": "///A/2184", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 23, "nt1": "///A/2080", "nt2": "///A/2183", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 24, "nt1": "///A/2081", "nt2": "///A/2182", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 25, "nt1": "///A/2082", "nt2": "///A/2181", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 26, "nt1": "///A/2083", "nt2": "///A/2180", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 27, "nt1": "///A/2084", "nt2": "///A/2179", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 28, "nt1": "///A/2085", "nt2": "///A/2178", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 29, "nt1": "///A/2086", "nt2": "///A/2177", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 30, "nt1": "///A/2087", "nt2": "///A/2176", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 31, "nt1": "///A/2088", "nt2": "///A/2175", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 32, "nt1": "///A/2089", "nt2": "///A/2174", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 33, "nt1": "///A/2090", "nt2": "///A/2173", "bp": "C-G", "name": "~Wobble", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 34, "nt1": "///A/2091", "nt2": "///A/2171", "bp": "C-A", "name": "~Wobble", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 35, "nt1": "///A/2093", "nt2": "///A/2170", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 36, "nt1": "///A/2094", "nt2": "///A/2169", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 37, "nt1": "///A/2097", "nt2": "///A/2167", "bp": "G-U", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 38, "nt1": "///A/2107", "nt2": "///A/2165", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 39, "nt1": "///A/2108", "nt2": "///A/2164", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 40, "nt1": "///A/2109", "nt2": "///A/2163", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 41, "nt1": "///A/2110", "nt2": "///A/2162", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 42, "nt1": "///A/2111", "nt2": "///A/2161", "bp": "G-C", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 43, "nt1": "///A/2112", "nt2": "///A/2160", "bp": "G-A", "name": "--", "Saenger": "--", "LW": "cSW", "DSSR": "cm-W" } ] }, { "index": 93, "num_stems": 0, "strand1": "GCUG", "strand2": "CGAA", "bp_type": "|||.", "helix_form": "A..", "num_pairs": 4, "pairs": [ { "index": 1, "nt1": "///A/1348", "nt2": "///A/1357", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/1349", "nt2": "///A/1356", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1350", "nt2": "///A/1355", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1351", "nt2": "///A/1354", "bp": "G-A", "name": "--", "Saenger": "--", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 94, "num_stems": 0, "strand1": "ACCUGUACUUCUGGUUACU", "strand2": "UGGACAUGAGGACCAAUGG", "bp_type": ".||||||||||||||||||", "helix_form": "x.AA.x.x...A...A..", "num_pairs": 19, "pairs": [ { "index": 1, "nt1": "///A/1382", "nt2": "///A/1377", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 2, "nt1": "///A/1385", "nt2": "///A/1376", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1386", "nt2": "///A/1375", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1387", "nt2": "///A/1374", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1388", "nt2": "///A/1373", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1389", "nt2": "///A/1372", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/1390", "nt2": "///A/1331", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1391", "nt2": "///A/1330", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/1392", "nt2": "///A/1587", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/1393", "nt2": "///A/1586", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/1394", "nt2": "///A/1585", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/1395", "nt2": "///A/1584", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/1396", "nt2": "///A/1583", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/1397", "nt2": "///A/1582", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/1398", "nt2": "///A/1581", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///A/1399", "nt2": "///A/1580", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/1400", "nt2": "///A/1579", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///A/1401", "nt2": "///A/1578", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///A/1402", "nt2": "///A/1577", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 95, "num_stems": 0, "strand1": "GCGAGGAGGGAC", "strand2": "CGAUCUUCGAAA", "bp_type": ".|..||||....", "helix_form": "..xx..A....", "num_pairs": 12, "pairs": [ { "index": 1, "nt1": "///A/1403", "nt2": "///A/1572", "bp": "G-C", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/1404", "nt2": "///A/1571", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1405", "nt2": "///A/1570", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 4, "nt1": "///A/1406", "nt2": "///A/1568", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 5, "nt1": "///A/1408", "nt2": "///A/1567", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1409", "nt2": "///A/1566", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/1410", "nt2": "///A/1565", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1411", "nt2": "///A/1564", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/1412", "nt2": "///A/1563", "bp": "G-G", "name": "--", "Saenger": "--", "LW": "t.H", "DSSR": "t.-M" }, { "index": 10, "nt1": "///A/1413", "nt2": "///A/1562", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 11, "nt1": "///A/1414", "nt2": "///A/1561", "bp": "A+A", "name": "--", "Saenger": "02-II", "LW": "tHH", "DSSR": "tM+M" }, { "index": 12, "nt1": "///A/1415", "nt2": "///A/1560", "bp": "C-A", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" } ] }, { "index": 96, "num_stems": 0, "strand1": "GCCAAGUUGGUUGAGCCAGCUUCC", "strand2": "CGGUUCGACCGGAUCGGAAGAGGG", "bp_type": ".|||||||||||..|||..|||||", "helix_form": "x.AAA.x.AA...xA..x....x", "num_pairs": 24, "pairs": [ { "index": 1, "nt1": "///A/1446", "nt2": "///A/1438", "bp": "G+C", "name": "~Hoogsteen", "Saenger": "--", "LW": "cHW", "DSSR": "cM+W" }, { "index": 2, "nt1": "///A/1448", "nt2": "///A/1437", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1449", "nt2": "///A/1436", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1450", "nt2": "///A/1435", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1451", "nt2": "///A/1434", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1452", "nt2": "///A/1433", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/1453", "nt2": "///A/1432", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1537", "nt2": "///A/1431", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/1538", "nt2": "///A/1430", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/1539", "nt2": "///A/1429", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/1540", "nt2": "///A/1428", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/1541", "nt2": "///A/1427", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/1542", "nt2": "///A/1426", "bp": "G+A", "name": "--", "Saenger": "--", "LW": "tHH", "DSSR": "tM+M" }, { "index": 14, "nt1": "///A/1543", "nt2": "///A/1425", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 15, "nt1": "///A/1545", "nt2": "///A/1424", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///A/1546", "nt2": "///A/1423", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/1547", "nt2": "///A/1422", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///A/1548", "nt2": "///A/1421", "bp": "A-A", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" }, { "index": 19, "nt1": "///A/1550", "nt2": "///A/1420", "bp": "G-A", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///A/1551", "nt2": "///A/1419", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///A/1552", "nt2": "///A/1418", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 22, "nt1": "///A/1553", "nt2": "///A/1417", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 23, "nt1": "///A/1554", "nt2": "///A/1416", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 24, "nt1": "///A/1555", "nt2": "///A/1558", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 97, "num_stems": 0, "strand1": "GAAAUCUUGG", "strand2": "CUUUGGGGCC", "bp_type": "||||||||||", "helix_form": ".......x.", "num_pairs": 10, "pairs": [ { "index": 1, "nt1": "///A/1469", "nt2": "///A/1494", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/1470", "nt2": "///A/1493", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1471", "nt2": "///A/1492", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1472", "nt2": "///A/1491", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1473", "nt2": "///A/1490", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1474", "nt2": "///A/1489", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/1475", "nt2": "///A/1488", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1476", "nt2": "///A/1487", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/1478", "nt2": "///A/1486", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/1479", "nt2": "///A/1485", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 98, "num_stems": 0, "strand1": "GGCCGAGAGCUGAGACGAGUCGUCU", "strand2": "UCGGAUCGUGGAAUUGAGCAGUAGA", "bp_type": ".|||..|.|||..|||..|||||||", "helix_form": ".A...xx.....x.x.x.AA....", "num_pairs": 25, "pairs": [ { "index": 1, "nt1": "///A/1497", "nt2": "///A/1468", "bp": "G-U", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" }, { "index": 2, "nt1": "///A/1498", "nt2": "///A/1467", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1499", "nt2": "///A/1466", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1500", "nt2": "///A/1465", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1501", "nt2": "///A/1464", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 6, "nt1": "///A/1502", "nt2": "///A/1463", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 7, "nt1": "///A/1503", "nt2": "///A/1719", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1504", "nt2": "///A/1461", "bp": "A-G", "name": "--", "Saenger": "--", "LW": "tHS", "DSSR": "tM-m" }, { "index": 9, "nt1": "///A/1505", "nt2": "///A/1460", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/1506", "nt2": "///A/1459", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/1507", "nt2": "///A/1458", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/1508", "nt2": "///A/1457", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 13, "nt1": "///A/1509", "nt2": "///A/1456", "bp": "A+A", "name": "--", "Saenger": "02-II", "LW": "tHH", "DSSR": "tM+M" }, { "index": 14, "nt1": "///A/1511", "nt2": "///A/1455", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/1512", "nt2": "///A/1454", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///A/1513", "nt2": "///A/1536", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/1514", "nt2": "///A/1535", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 18, "nt1": "///A/1515", "nt2": "///A/1533", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 19, "nt1": "///A/1516", "nt2": "///A/1532", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///A/1517", "nt2": "///A/1531", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///A/1518", "nt2": "///A/1530", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 22, "nt1": "///A/1519", "nt2": "///A/1529", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 23, "nt1": "///A/1520", "nt2": "///A/1528", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 24, "nt1": "///A/1521", "nt2": "///A/1527", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 25, "nt1": "///A/1522", "nt2": "///A/1526", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 99, "num_stems": 0, "strand1": "GCACCGUAACU", "strand2": "CGUGGAAAGGG", "bp_type": "|||||....|.", "helix_form": ".AAA..x...", "num_pairs": 11, "pairs": [ { "index": 1, "nt1": "///A/1672", "nt2": "///A/1696", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/1673", "nt2": "///A/1695", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1674", "nt2": "///A/1694", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1675", "nt2": "///A/1693", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1676", "nt2": "///A/1692", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1677", "nt2": "///A/1691", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 7, "nt1": "///A/1678", "nt2": "///A/1690", "bp": "U-A", "name": "--", "Saenger": "--", "LW": "tSH", "DSSR": "tm-M" }, { "index": 8, "nt1": "///A/1679", "nt2": "///A/1688", "bp": "A+A", "name": "--", "Saenger": "02-II", "LW": "tHH", "DSSR": "tM+M" }, { "index": 9, "nt1": "///A/1680", "nt2": "///A/1687", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 10, "nt1": "///A/1681", "nt2": "///A/1686", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/1682", "nt2": "///A/1685", "bp": "U+G", "name": "--", "Saenger": "--", "LW": "t.W", "DSSR": "t.+W" } ] }, { "index": 100, "num_stems": 0, "strand1": "AUCCGAGCUCUGGCUGGUC", "strand2": "UAGGAGUGGGAUCGGCCGG", "bp_type": ".|||..|||||||||||||", "helix_form": "x.A.x.......A....x", "num_pairs": 19, "pairs": [ { "index": 1, "nt1": "///A/1718", "nt2": "///A/1715", "bp": "A-U", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/1720", "nt2": "///A/1714", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1721", "nt2": "///A/1713", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1722", "nt2": "///A/1712", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1723", "nt2": "///A/1711", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 6, "nt1": "///A/1726", "nt2": "///A/1709", "bp": "A-G", "name": "--", "Saenger": "--", "LW": "tHS", "DSSR": "tM-m" }, { "index": 7, "nt1": "///A/1727", "nt2": "///A/1708", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1728", "nt2": "///A/1707", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/1729", "nt2": "///A/1706", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/1730", "nt2": "///A/1705", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/1731", "nt2": "///A/1704", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/1732", "nt2": "///A/1703", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/1733", "nt2": "///A/1702", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/1734", "nt2": "///A/1701", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/1735", "nt2": "///A/1700", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///A/1736", "nt2": "///A/1699", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/1737", "nt2": "///A/1698", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///A/1738", "nt2": "///A/1697", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///A/1739", "nt2": "///A/1743", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 101, "num_stems": 0, "strand1": "AACAGAACGCCU", "strand2": "UUGUCAUGCGGA", "bp_type": ".||.|.|||||.", "helix_form": "x.xxxxxAA.x", "num_pairs": 12, "pairs": [ { "index": 1, "nt1": "///A/1772", "nt2": "///A/1765", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 2, "nt1": "///A/1774", "nt2": "///A/1764", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1775", "nt2": "///A/1763", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/754", "nt2": "///A/1762", "bp": "A+U", "name": "Hoogsteen", "Saenger": "23-XXIII", "LW": "cHW", "DSSR": "cM+W" }, { "index": 5, "nt1": "///A/719", "nt2": "///A/1761", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1964", "nt2": "///A/1760", "bp": "A+A", "name": "--", "Saenger": "--", "LW": "tWS", "DSSR": "tW+m" }, { "index": 7, "nt1": "///A/1816", "nt2": "///A/1683", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1817", "nt2": "///A/1962", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/1818", "nt2": "///A/1961", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/1819", "nt2": "///A/1960", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/1820", "nt2": "///A/1959", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/1821", "nt2": "///A/1957", "bp": "U+A", "name": "Hoogsteen", "Saenger": "23-XXIII", "LW": "cWH", "DSSR": "cW+M" } ] }, { "index": 102, "num_stems": 0, "strand1": "AGCACUCUCG", "strand2": "GUGUGGGAAU", "bp_type": ".|||||||..", "helix_form": "..AAA..x.", "num_pairs": 10, "pairs": [ { "index": 1, "nt1": "///A/1778", "nt2": "///A/1815", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 2, "nt1": "///A/1779", "nt2": "///A/1814", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1780", "nt2": "///A/1813", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1781", "nt2": "///A/1812", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1782", "nt2": "///A/1811", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1783", "nt2": "///A/1810", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/1784", "nt2": "///A/1809", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1785", "nt2": "///A/1808", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/1787", "nt2": "///A/1806", "bp": "C-A", "name": "~rHoogsteen", "Saenger": "25-XXV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 10, "nt1": "///A/1786", "nt2": "///A/1805", "bp": "G+U", "name": "--", "Saenger": "--", "LW": "tSS", "DSSR": "tm+m" } ] }, { "index": 103, "num_stems": 0, "strand1": "AACACG", "strand2": "AGGUGA", "bp_type": "..|||.", "helix_form": "..AA.", "num_pairs": 6, "pairs": [ { "index": 1, "nt1": "///A/1789", "nt2": "///A/1802", "bp": "A+A", "name": "--", "Saenger": "02-II", "LW": "tHH", "DSSR": "tM+M" }, { "index": 2, "nt1": "///A/1790", "nt2": "///A/1801", "bp": "A+G", "name": "--", "Saenger": "--", "LW": "tWS", "DSSR": "tW+m" }, { "index": 3, "nt1": "///A/1791", "nt2": "///A/1800", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1792", "nt2": "///A/1799", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1793", "nt2": "///A/1798", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1794", "nt2": "///A/1797", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 104, "num_stems": 0, "strand1": "GCCGUGCCGGGGUU", "strand2": "CGGCAUGGCCCCGA", "bp_type": "|||||||||||||.", "helix_form": "..x.x....xAA.", "num_pairs": 14, "pairs": [ { "index": 1, "nt1": "///A/1822", "nt2": "///A/1892", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/1823", "nt2": "///A/1891", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1824", "nt2": "///A/1890", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1827", "nt2": "///A/1889", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1828", "nt2": "///A/1888", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1829", "nt2": "///A/1885", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/1830", "nt2": "///A/1884", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1831", "nt2": "///A/1883", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/1832", "nt2": "///A/1882", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/1833", "nt2": "///A/1881", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/1836", "nt2": "///A/1880", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/1837", "nt2": "///A/1879", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/1838", "nt2": "///A/1878", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/1839", "nt2": "///A/1877", "bp": "U-A", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" } ] }, { "index": 105, "num_stems": 0, "strand1": "UUGAUGGGGUUAGCG", "strand2": "CUAGUUCUCGAGCGA", "bp_type": ".....|||||..||.", "helix_form": ".....A....x...", "num_pairs": 15, "pairs": [ { "index": 1, "nt1": "///A/1842", "nt2": "///A/1874", "bp": "U-C", "name": "--", "Saenger": "18-XVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/1843", "nt2": "///A/1873", "bp": "U-U", "name": "--", "Saenger": "16-XVI", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1844", "nt2": "///A/1872", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 4, "nt1": "///A/1845", "nt2": "///A/1871", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 5, "nt1": "///A/1846", "nt2": "///A/1870", "bp": "U-U", "name": "--", "Saenger": "16-XVI", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1847", "nt2": "///A/1869", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/1848", "nt2": "///A/1868", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/1849", "nt2": "///A/1867", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/1850", "nt2": "///A/1866", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/1851", "nt2": "///A/1865", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/1852", "nt2": "///A/1864", "bp": "U-A", "name": "--", "Saenger": "--", "LW": ".WH", "DSSR": ".W-M" }, { "index": 12, "nt1": "///A/1853", "nt2": "///A/1862", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 13, "nt1": "///A/1854", "nt2": "///A/1861", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/1855", "nt2": "///A/1860", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/1856", "nt2": "///A/1859", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 106, "num_stems": 0, "strand1": "GGUCCU", "strand2": "CCGGGA", "bp_type": "||||..", "helix_form": "A..x.", "num_pairs": 6, "pairs": [ { "index": 1, "nt1": "///A/1908", "nt2": "///A/1896", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/1909", "nt2": "///A/1895", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1910", "nt2": "///A/1894", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1911", "nt2": "///A/1893", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1912", "nt2": "///A/1916", "bp": "C+G", "name": "rWC", "Saenger": "22-XXII", "LW": "tWW", "DSSR": "tW+W" }, { "index": 6, "nt1": "///A/1913", "nt2": "///A/1915", "bp": "U+A", "name": "--", "Saenger": "--", "LW": "tHH", "DSSR": "tM+M" } ] }, { "index": 107, "num_stems": 0, "strand1": "UAGC", "strand2": "AGCG", "bp_type": "..||", "helix_form": "..x", "num_pairs": 4, "pairs": [ { "index": 1, "nt1": "///A/1918", "nt2": "///A/1956", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 2, "nt1": "///A/1919", "nt2": "///A/1955", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 3, "nt1": "///A/1920", "nt2": "///A/1954", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1921", "nt2": "///A/1951", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 108, "num_stems": 0, "strand1": "AGUCGGG", "strand2": "CCAGCCU", "bp_type": ".|||||.", "helix_form": "x.....", "num_pairs": 7, "pairs": [ { "index": 1, "nt1": "///A/1923", "nt2": "///A/1949", "bp": "A-C", "name": "--", "Saenger": "--", "LW": "tHW", "DSSR": "tM-W" }, { "index": 2, "nt1": "///A/1932", "nt2": "///A/1948", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/1933", "nt2": "///A/1947", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/1934", "nt2": "///A/1946", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/1935", "nt2": "///A/1945", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/1936", "nt2": "///A/1944", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/1937", "nt2": "///A/1943", "bp": "G-U", "name": "--", "Saenger": "--", "LW": "cW.", "DSSR": "cW-." } ] }, { "index": 109, "num_stems": 0, "strand1": "AAUGGGAA", "strand2": "UUCCACGU", "bp_type": ".|.|.|..", "helix_form": "x...xx.", "num_pairs": 8, "pairs": [ { "index": 1, "nt1": "///A/2017", "nt2": "///A/558", "bp": "A-U", "name": "--", "Saenger": "--", "LW": "tH.", "DSSR": "tM-." }, { "index": 2, "nt1": "///A/565", "nt2": "///A/556", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/566", "nt2": "///A/555", "bp": "U-C", "name": "--", "Saenger": "18-XVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/567", "nt2": "///A/554", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/568", "nt2": "///A/553", "bp": "G-A", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/2005", "nt2": "///A/522", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/2006", "nt2": "///A/2022", "bp": "A-G", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/2007", "nt2": "///A/2021", "bp": "A+U", "name": "--", "Saenger": "--", "LW": "cWH", "DSSR": "cW+M" } ] }, { "index": 110, "num_stems": 0, "strand1": "GG", "strand2": "CC", "bp_type": "||", "helix_form": ".", "num_pairs": 2, "pairs": [ { "index": 1, "nt1": "///A/2043", "nt2": "///A/2599", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/2044", "nt2": "///A/2598", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 111, "num_stems": 0, "strand1": "GG", "strand2": "GC", "bp_type": ".|", "helix_form": "x", "num_pairs": 2, "pairs": [ { "index": 1, "nt1": "///A/2120", "nt2": "///A/2146", "bp": "G-G", "name": "--", "Saenger": "--", "LW": "cWS", "DSSR": "cW-m" }, { "index": 2, "nt1": "///A/2115", "nt2": "///A/2147", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 112, "num_stems": 0, "strand1": "AGC", "strand2": "UCG", "bp_type": "..|", "helix_form": "x.", "num_pairs": 3, "pairs": [ { "index": 1, "nt1": "///A/2122", "nt2": "///A/2142", "bp": "A-U", "name": "--", "Saenger": "--", "LW": "tHW", "DSSR": "tM-W" }, { "index": 2, "nt1": "///A/2123", "nt2": "///A/2140", "bp": "G-C", "name": "~rHoogsteen", "Saenger": "--", "LW": "tHW", "DSSR": "tM-W" }, { "index": 3, "nt1": "///A/2124", "nt2": "///A/2141", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 113, "num_stems": 0, "strand1": "GGA", "strand2": "CUU", "bp_type": "|||", "helix_form": "..", "num_pairs": 3, "pairs": [ { "index": 1, "nt1": "///A/2127", "nt2": "///A/2138", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/2128", "nt2": "///A/2137", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/2129", "nt2": "///A/2136", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 114, "num_stems": 0, "strand1": "AGUGUAUGGUGGCAGUAGGUUCCGGGAACAGGCUAUACCGCCCGGAGG", "strand2": "UCACGUUUCGAUGUCAUCCAAGGCCCCGUUCCGGUGUGGCGGCACUAC", "bp_type": ".|||||.|||.|||||||||||||||...||||||.||||||..||..", "helix_form": "..A.....A.x....x...x.x...xxxxxxA.xx..A.AA.xx..x", "num_pairs": 48, "pairs": [ { "index": 1, "nt1": "///A/2214", "nt2": "///A/2079", "bp": "A-U", "name": "--", "Saenger": "--", "LW": "tHW", "DSSR": "tM-W" }, { "index": 2, "nt1": "///A/2215", "nt2": "///A/2078", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/2216", "nt2": "///A/2077", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/2217", "nt2": "///A/2076", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/2218", "nt2": "///A/2075", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/2219", "nt2": "///A/2074", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/2220", "nt2": "///A/2073", "bp": "U-U", "name": "--", "Saenger": "16-XVI", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/2221", "nt2": "///A/2072", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/2222", "nt2": "///A/2071", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/2223", "nt2": "///A/2070", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/2224", "nt2": "///A/2069", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 12, "nt1": "///A/2226", "nt2": "///A/2068", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/2227", "nt2": "///A/2067", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/2228", "nt2": "///A/2066", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/2229", "nt2": "///A/2065", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///A/2230", "nt2": "///A/2064", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/2422", "nt2": "///A/2061", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///A/2423", "nt2": "///A/2060", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///A/2424", "nt2": "///A/2059", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///A/2425", "nt2": "///A/2058", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///A/2428", "nt2": "///A/2057", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 22, "nt1": "///A/2429", "nt2": "///A/2056", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 23, "nt1": "///A/2430", "nt2": "///A/2054", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 24, "nt1": "///A/2431", "nt2": "///A/2053", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 25, "nt1": "///A/2432", "nt2": "///A/2052", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 26, "nt1": "///A/2433", "nt2": "///A/2051", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 27, "nt1": "///A/2437", "nt2": "///A/2488", "bp": "A-C", "name": "~rHoogsteen", "Saenger": "25-XXV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 28, "nt1": "///A/2438", "nt2": "///A/2434", "bp": "A+G", "name": "--", "Saenger": "09-IX", "LW": "cHW", "DSSR": "cM+W" }, { "index": 29, "nt1": "///A/2439", "nt2": "///A/2491", "bp": "C-U", "name": "--", "Saenger": "18-XVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 30, "nt1": "///A/2440", "nt2": "///A/2487", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 31, "nt1": "///A/2441", "nt2": "///A/2485", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 32, "nt1": "///A/2442", "nt2": "///A/2483", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 33, "nt1": "///A/2443", "nt2": "///A/2482", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 34, "nt1": "///A/2444", "nt2": "///A/2481", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 35, "nt1": "///A/2446", "nt2": "///A/2480", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 36, "nt1": "///A/2447", "nt2": "///A/2477", "bp": "U-G", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 37, "nt1": "///A/2448", "nt2": "///A/2476", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 38, "nt1": "///A/2449", "nt2": "///A/2475", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 39, "nt1": "///A/2450", "nt2": "///A/2474", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 40, "nt1": "///A/2451", "nt2": "///A/2473", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 41, "nt1": "///A/2452", "nt2": "///A/2472", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 42, "nt1": "///A/2453", "nt2": "///A/2471", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 43, "nt1": "///A/2454", "nt2": "///A/2470", "bp": "C-C", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 44, "nt1": "///A/2468", "nt2": "///A/2463", "bp": "G-A", "name": "--", "Saenger": "--", "LW": "cWS", "DSSR": "cW-m" }, { "index": 45, "nt1": "///A/2457", "nt2": "///A/2467", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 46, "nt1": "///A/2458", "nt2": "///A/2466", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 47, "nt1": "///A/2459", "nt2": "///A/2465", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 48, "nt1": "///A/2516", "nt2": "///A/2462", "bp": "G+C", "name": "rWC", "Saenger": "22-XXII", "LW": "tWW", "DSSR": "tW+W" } ] }, { "index": 115, "num_stems": 0, "strand1": "GACC", "strand2": "CUGG", "bp_type": "||||", "helix_form": ".Ax", "num_pairs": 4, "pairs": [ { "index": 1, "nt1": "///A/2233", "nt2": "///A/2245", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/2234", "nt2": "///A/2244", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/2235", "nt2": "///A/2243", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/2262", "nt2": "///A/2242", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 116, "num_stems": 0, "strand1": "AAGGAGGAG", "strand2": "AUCCUCCUC", "bp_type": "..|||||||", "helix_form": ".x....Ax", "num_pairs": 9, "pairs": [ { "index": 1, "nt1": "///A/2260", "nt2": "///A/2253", "bp": "A+A", "name": "--", "Saenger": "02-II", "LW": "tHH", "DSSR": "tM+M" }, { "index": 2, "nt1": "///A/2261", "nt2": "///A/2252", "bp": "A+U", "name": "--", "Saenger": "--", "LW": "tHH", "DSSR": "tM+M" }, { "index": 3, "nt1": "///A/2263", "nt2": "///A/2251", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/2264", "nt2": "///A/2250", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/2265", "nt2": "///A/2249", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/2266", "nt2": "///A/2248", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/2267", "nt2": "///A/2247", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/2268", "nt2": "///A/2246", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/2269", "nt2": "///A/2414", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 117, "num_stems": 0, "strand1": "AGGUGCGCU", "strand2": "UUCGCGCGA", "bp_type": ".|||||||.", "helix_form": "x...A..x", "num_pairs": 9, "pairs": [ { "index": 1, "nt1": "///A/2274", "nt2": "///A/2331", "bp": "A+U", "name": "rWC", "Saenger": "21-XXI", "LW": "tWW", "DSSR": "tW+W" }, { "index": 2, "nt1": "///A/2276", "nt2": "///A/2330", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/2277", "nt2": "///A/2329", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/2278", "nt2": "///A/2328", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/2279", "nt2": "///A/2327", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/2280", "nt2": "///A/2326", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/2281", "nt2": "///A/2325", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/2282", "nt2": "///A/2324", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/2283", "nt2": "///A/2322", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" } ] }, { "index": 118, "num_stems": 0, "strand1": "CAGACCGG", "strand2": "GGCUGGCU", "bp_type": "|.|||||.", "helix_form": "x...AA.", "num_pairs": 8, "pairs": [ { "index": 1, "nt1": "///A/2284", "nt2": "///A/2308", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/2285", "nt2": "///A/2305", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 3, "nt1": "///A/2286", "nt2": "///A/2304", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/2287", "nt2": "///A/2303", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/2288", "nt2": "///A/2302", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/2289", "nt2": "///A/2301", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/2290", "nt2": "///A/2300", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/2291", "nt2": "///A/2299", "bp": "G-U", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 119, "num_stems": 0, "strand1": "GUCUU", "strand2": "CGGAA", "bp_type": "||||.", "helix_form": ".xA.", "num_pairs": 5, "pairs": [ { "index": 1, "nt1": "///A/2310", "nt2": "///A/2319", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/2311", "nt2": "///A/2318", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/2372", "nt2": "///A/2317", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/2373", "nt2": "///A/2316", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/2374", "nt2": "///A/2315", "bp": "U+A", "name": "--", "Saenger": "--", "LW": "cHW", "DSSR": "cM+W" } ] }, { "index": 120, "num_stems": 0, "strand1": "GUCGAGCAGGUACG", "strand2": "CAGAGCGUCGAUGA", "bp_type": "|||..||||.|||.", "helix_form": "......A.xx.A.", "num_pairs": 14, "pairs": [ { "index": 1, "nt1": "///A/2349", "nt2": "///A/2342", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/2350", "nt2": "///A/2341", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/2351", "nt2": "///A/2340", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/2352", "nt2": "///A/2339", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 5, "nt1": "///A/2353", "nt2": "///A/2338", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 6, "nt1": "///A/2354", "nt2": "///A/2337", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/2355", "nt2": "///A/2336", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/2356", "nt2": "///A/2335", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/2357", "nt2": "///A/2334", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/2358", "nt2": "///A/2332", "bp": "G+G", "name": "--", "Saenger": "06-VI", "LW": "cWH", "DSSR": "cW+M" }, { "index": 11, "nt1": "///A/2359", "nt2": "///A/2368", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/2360", "nt2": "///A/2367", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/2361", "nt2": "///A/2366", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/2362", "nt2": "///A/2365", "bp": "G-A", "name": "--", "Saenger": "--", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 121, "num_stems": 0, "strand1": "GUAU", "strand2": "CAUG", "bp_type": "||||", "helix_form": "Axx", "num_pairs": 4, "pairs": [ { "index": 1, "nt1": "///A/2370", "nt2": "///A/2272", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/2371", "nt2": "///A/2271", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/2312", "nt2": "///A/2270", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/2313", "nt2": "///A/2376", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 122, "num_stems": 0, "strand1": "CGGCUCAUCACCCUAGGGGCU", "strand2": "GUCGCGUGGUGGGGACCCUGG", "bp_type": "||||.|||||||||.||||||", "helix_form": "x..x.x..A.x..xxA.AA.", "num_pairs": 21, "pairs": [ { "index": 1, "nt1": "///A/2494", "nt2": "///A/2569", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/2495", "nt2": "///A/2567", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/2496", "nt2": "///A/2566", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/2497", "nt2": "///A/2565", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/2498", "nt2": "///A/2562", "bp": "U-C", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/2499", "nt2": "///A/2561", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/2500", "nt2": "///A/2558", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/2501", "nt2": "///A/2557", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/2502", "nt2": "///A/2556", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/2503", "nt2": "///A/2555", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/2504", "nt2": "///A/2554", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/2507", "nt2": "///A/2532", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/2508", "nt2": "///A/2531", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/2509", "nt2": "///A/2530", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/2752", "nt2": "///A/2528", "bp": "A-A", "name": "--", "Saenger": "--", "LW": "cWS", "DSSR": "cW-m" }, { "index": 16, "nt1": "///A/2510", "nt2": "///A/2527", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/2511", "nt2": "///A/2526", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///A/2512", "nt2": "///A/2525", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///A/2513", "nt2": "///A/2524", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///A/2514", "nt2": "///A/2523", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///A/2515", "nt2": "///A/2522", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 123, "num_stems": 0, "strand1": "CGCCAUUU", "strand2": "UCGGUAAA", "bp_type": ".|||||..", "helix_form": "xA...x.", "num_pairs": 8, "pairs": [ { "index": 1, "nt1": "///A/2543", "nt2": "///A/1942", "bp": "C-U", "name": "--", "Saenger": "--", "LW": "cW.", "DSSR": "cW-." }, { "index": 2, "nt1": "///A/2544", "nt2": "///A/2538", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/2545", "nt2": "///A/2537", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/2546", "nt2": "///A/2536", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/2547", "nt2": "///A/2535", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/2548", "nt2": "///A/2534", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/2549", "nt2": "///A/2553", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 8, "nt1": "///A/2550", "nt2": "///A/2552", "bp": "U-A", "name": "--", "Saenger": "--", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 124, "num_stems": 0, "strand1": "UAAGAACGUCG", "strand2": "UGGCUUGCAGA", "bp_type": "...|||||||.", "helix_form": "xxx...xAA.", "num_pairs": 11, "pairs": [ { "index": 1, "nt1": "///A/2573", "nt2": "///A/1769", "bp": "U+U", "name": "--", "Saenger": "12-XII", "LW": "tWW", "DSSR": "tW+W" }, { "index": 2, "nt1": "///A/2574", "nt2": "///A/2595", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 3, "nt1": "///A/1770", "nt2": "///A/2594", "bp": "A-G", "name": "--", "Saenger": "--", "LW": "cSS", "DSSR": "cm-m" }, { "index": 4, "nt1": "///A/2575", "nt2": "///A/2593", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/2576", "nt2": "///A/2592", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/2577", "nt2": "///A/2591", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/2578", "nt2": "///A/2590", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/2579", "nt2": "///A/2588", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/2580", "nt2": "///A/2587", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/2581", "nt2": "///A/2586", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/2582", "nt2": "///A/2585", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 125, "num_stems": 0, "strand1": "UCUGCCGUGGACG", "strand2": "AGACGGCGCCUGA", "bp_type": "||||||||||||.", "helix_form": "A.x.....A.xx", "num_pairs": 13, "pairs": [ { "index": 1, "nt1": "///A/2602", "nt2": "///A/2041", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/2603", "nt2": "///A/2040", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/2604", "nt2": "///A/2039", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/2605", "nt2": "///A/2037", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/2606", "nt2": "///A/2036", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/2607", "nt2": "///A/2035", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/2608", "nt2": "///A/2034", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/2609", "nt2": "///A/2033", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/2610", "nt2": "///A/2032", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/2611", "nt2": "///A/2031", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/2612", "nt2": "///A/2030", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/2613", "nt2": "///A/2764", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/2614", "nt2": "///A/2768", "bp": "G+A", "name": "Linker", "Saenger": "--", "LW": "tSS", "DSSR": "tm+m" } ] }, { "index": 126, "num_stems": 0, "strand1": "AGGUCGGAGUGGACGAACCUGGUGAACCGGUUGUCACGGU", "strand2": "ACAAUCCUCGUCGGCUUGCAUCGAUGGGCCGACGGUGCCG", "bp_type": ".|...|||||||.|||||.||||...||||||||||||||", "helix_form": "x.xx.AAA...x..AA.xx....x.x..A.xA..AAxA.", "num_pairs": 40, "pairs": [ { "index": 1, "nt1": "///A/2649", "nt2": "///A/2518", "bp": "A+A", "name": "--", "Saenger": "01-I", "LW": "tWW", "DSSR": "tW+W" }, { "index": 2, "nt1": "///A/2650", "nt2": "///A/2645", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/2651", "nt2": "///A/2644", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 4, "nt1": "///A/2643", "nt2": "///A/2652", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 5, "nt1": "///A/2654", "nt2": "///A/2640", "bp": "C-U", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/2655", "nt2": "///A/2639", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/2656", "nt2": "///A/2638", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/2657", "nt2": "///A/2637", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/2658", "nt2": "///A/2636", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/2659", "nt2": "///A/2635", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/2660", "nt2": "///A/2634", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/2661", "nt2": "///A/2633", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/2662", "nt2": "///A/2719", "bp": "A-G", "name": "Imino", "Saenger": "08-VIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/2663", "nt2": "///A/2718", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/2664", "nt2": "///A/2717", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///A/2665", "nt2": "///A/2716", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/2666", "nt2": "///A/2715", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///A/2667", "nt2": "///A/2714", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///A/2668", "nt2": "///A/2670", "bp": "C+C", "name": "--", "Saenger": "--", "LW": "cSH", "DSSR": "cm+M" }, { "index": 20, "nt1": "///A/2671", "nt2": "///A/2712", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///A/2672", "nt2": "///A/2711", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 22, "nt1": "///A/2673", "nt2": "///A/2710", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 23, "nt1": "///A/2674", "nt2": "///A/2709", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 24, "nt1": "///A/2675", "nt2": "///A/2708", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 25, "nt1": "///A/2860", "nt2": "///A/2707", "bp": "A+U", "name": "Hoogsteen", "Saenger": "23-XXIII", "LW": "cHW", "DSSR": "cM+W" }, { "index": 26, "nt1": "///A/2859", "nt2": "///A/2706", "bp": "A+G", "name": "--", "Saenger": "--", "LW": "tWS", "DSSR": "tW+m" }, { "index": 27, "nt1": "///A/2678", "nt2": "///A/2705", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 28, "nt1": "///A/2679", "nt2": "///A/2704", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 29, "nt1": "///A/2680", "nt2": "///A/2703", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 30, "nt1": "///A/2681", "nt2": "///A/2702", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 31, "nt1": "///A/2682", "nt2": "///A/2701", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 32, "nt1": "///A/2683", "nt2": "///A/2698", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 33, "nt1": "///A/2684", "nt2": "///A/2697", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 34, "nt1": "///A/2685", "nt2": "///A/2696", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 35, "nt1": "///A/2686", "nt2": "///A/2695", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 36, "nt1": "///A/2687", "nt2": "///A/2694", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 37, "nt1": "///A/2688", "nt2": "///A/2693", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 38, "nt1": "///A/1442", "nt2": "///A/2691", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 39, "nt1": "///A/1443", "nt2": "///A/2690", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 40, "nt1": "///A/1444", "nt2": "///A/2689", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 127, "num_stems": 0, "strand1": "AUAAGCGGGAACUUGCCUCAAAGAUCUCAC", "strand2": "AAGUCGCCAUAGAAGGGAGAGUUUAGAGUG", "bp_type": "....||||...|||.||||...||||||||", "helix_form": ".xxx..A.xx...x.AAA.xxx.AA..Ax", "num_pairs": 30, "pairs": [ { "index": 1, "nt1": "///A/2740", "nt2": "///A/2736", "bp": "A-A", "name": "--", "Saenger": "05-V", "LW": "tWH", "DSSR": "tW-M" }, { "index": 2, "nt1": "///A/2741", "nt2": "///A/2735", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 3, "nt1": "///A/2744", "nt2": "///A/2734", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 4, "nt1": "///A/2745", "nt2": "///A/2743", "bp": "A+U", "name": "Hoogsteen", "Saenger": "23-XXIII", "LW": "cHW", "DSSR": "cM+W" }, { "index": 5, "nt1": "///A/2746", "nt2": "///A/2732", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/2747", "nt2": "///A/2731", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/2748", "nt2": "///A/2730", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/2749", "nt2": "///A/2729", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/2750", "nt2": "///A/2728", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 10, "nt1": "///A/2751", "nt2": "///A/2726", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 11, "nt1": "///A/2753", "nt2": "///A/2725", "bp": "A-A", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/2754", "nt2": "///A/2724", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/2755", "nt2": "///A/2723", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///A/2756", "nt2": "///A/2722", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///A/2757", "nt2": "///A/2631", "bp": "G-G", "name": "--", "Saenger": "--", "LW": "cHW", "DSSR": "cM-W" }, { "index": 16, "nt1": "///A/2758", "nt2": "///A/2630", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///A/2759", "nt2": "///A/2629", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///A/2760", "nt2": "///A/2628", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 19, "nt1": "///A/2761", "nt2": "///A/2627", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///A/2762", "nt2": "///A/2626", "bp": "A-A", "name": "~Sheared", "Saenger": "--", "LW": "tSH", "DSSR": "tm-M" }, { "index": 21, "nt1": "///A/2765", "nt2": "///A/2625", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 22, "nt1": "///A/2763", "nt2": "///A/2624", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 23, "nt1": "///A/2769", "nt2": "///A/2623", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 24, "nt1": "///A/2770", "nt2": "///A/2622", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 25, "nt1": "///A/2771", "nt2": "///A/2621", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 26, "nt1": "///A/2772", "nt2": "///A/2620", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 27, "nt1": "///A/2773", "nt2": "///A/2619", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 28, "nt1": "///A/2774", "nt2": "///A/2618", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 29, "nt1": "///A/2775", "nt2": "///A/2617", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 30, "nt1": "///A/2776", "nt2": "///A/2881", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 128, "num_stems": 0, "strand1": "AUUCCCCU", "strand2": "CAAGGGGU", "bp_type": ".||||||.", "helix_form": ".AAA.x.", "num_pairs": 8, "pairs": [ { "index": 1, "nt1": "///A/2787", "nt2": "///A/2783", "bp": "A-C", "name": "~Wobble", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///A/2788", "nt2": "///A/2782", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/2789", "nt2": "///A/2781", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/2790", "nt2": "///A/2780", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/2791", "nt2": "///A/2779", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/2792", "nt2": "///A/2778", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/2793", "nt2": "///A/2879", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/2794", "nt2": "///A/2878", "bp": "U-U", "name": "--", "Saenger": "16-XVI", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 129, "num_stems": 0, "strand1": "AGGGCCGUCGA", "strand2": "GCCCGGCAGCA", "bp_type": ".|||||||||.", "helix_form": "..AAx....x", "num_pairs": 11, "pairs": [ { "index": 1, "nt1": "///A/2797", "nt2": "///A/2877", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 2, "nt1": "///A/2798", "nt2": "///A/2876", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/2799", "nt2": "///A/2875", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/2800", "nt2": "///A/2874", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/2801", "nt2": "///A/2873", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/2802", "nt2": "///A/2818", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/2803", "nt2": "///A/2817", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/2804", "nt2": "///A/2816", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/2805", "nt2": "///A/2815", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/2806", "nt2": "///A/2814", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/2808", "nt2": "///A/2813", "bp": "A-A", "name": "--", "Saenger": "--", "LW": "cSW", "DSSR": "cm-W" } ] }, { "index": 130, "num_stems": 0, "strand1": "GUAGGCUGGUGUG", "strand2": "AAUCUGACCUCGA", "bp_type": ".||||||||.||.", "helix_form": "xAAx.AA.x...", "num_pairs": 13, "pairs": [ { "index": 1, "nt1": "///A/2821", "nt2": "///A/2870", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 2, "nt1": "///A/2823", "nt2": "///A/2869", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/2824", "nt2": "///A/2868", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/2825", "nt2": "///A/2867", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/2826", "nt2": "///A/2865", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/2827", "nt2": "///A/2864", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///A/2828", "nt2": "///A/2863", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///A/2829", "nt2": "///A/2862", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///A/2830", "nt2": "///A/2861", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///A/2832", "nt2": "///A/2858", "bp": "U-U", "name": "--", "Saenger": "16-XVI", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///A/2833", "nt2": "///A/2857", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///A/2834", "nt2": "///A/2856", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///A/2835", "nt2": "///A/2855", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 131, "num_stems": 0, "strand1": "GCGUUG", "strand2": "UGCGGA", "bp_type": ".||||.", "helix_form": ".....", "num_pairs": 6, "pairs": [ { "index": 1, "nt1": "///A/2839", "nt2": "///A/2852", "bp": "G-U", "name": "--", "Saenger": "--", "LW": "cWS", "DSSR": "cW-m" }, { "index": 2, "nt1": "///A/2840", "nt2": "///A/2851", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///A/2841", "nt2": "///A/2850", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///A/2842", "nt2": "///A/2849", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///A/2843", "nt2": "///A/2848", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///A/2844", "nt2": "///A/2847", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" } ] }, { "index": 132, "num_stems": 0, "strand1": "GCUUGACGAU", "strand2": "CGAACUGCUA", "bp_type": "|||||||||.", "helix_form": "..AAA....", "num_pairs": 10, "pairs": [ { "index": 1, "nt1": "///B/2", "nt2": "///B/118", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 2, "nt1": "///B/3", "nt2": "///B/117", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 3, "nt1": "///B/4", "nt2": "///B/116", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///B/5", "nt2": "///B/115", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///B/6", "nt2": "///B/114", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///B/7", "nt2": "///B/113", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///B/8", "nt2": "///B/112", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///B/9", "nt2": "///B/111", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///B/10", "nt2": "///B/110", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///B/11", "nt2": "///B/109", "bp": "U-A", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" } ] }, { "index": 133, "num_stems": 0, "strand1": "AAGUCAGGUGACGACGCCCGCCGAUGGUAGUGUGGGG", "strand2": "UUCAGUCCACGGUUGCGAGUGGAUGAGAGUGUACCCC", "bp_type": "..||||||||.||||||.||||.......||||||||", "helix_form": ".xx...x.Ax.....Axxx.A...........AA.A", "num_pairs": 37, "pairs": [ { "index": 1, "nt1": "///B/45", "nt2": "///B/40", "bp": "A-U", "name": "~Sheared", "Saenger": "--", "LW": "tHS", "DSSR": "tM-m" }, { "index": 2, "nt1": "///B/46", "nt2": "///B/39", "bp": "A-U", "name": "--", "Saenger": "--", "LW": "cWS", "DSSR": "cW-m" }, { "index": 3, "nt1": "///B/44", "nt2": "///B/38", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 4, "nt1": "///B/48", "nt2": "///B/34", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 5, "nt1": "///B/49", "nt2": "///B/33", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 6, "nt1": "///B/50", "nt2": "///B/32", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 7, "nt1": "///B/51", "nt2": "///B/31", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 8, "nt1": "///B/54", "nt2": "///B/30", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 9, "nt1": "///B/55", "nt2": "///B/29", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 10, "nt1": "///B/56", "nt2": "///B/28", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 11, "nt1": "///B/59", "nt2": "///B/24", "bp": "A-G", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 12, "nt1": "///B/60", "nt2": "///B/23", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 13, "nt1": "///B/61", "nt2": "///B/22", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 14, "nt1": "///B/62", "nt2": "///B/21", "bp": "A-U", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 15, "nt1": "///B/63", "nt2": "///B/20", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 16, "nt1": "///B/64", "nt2": "///B/19", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 17, "nt1": "///B/65", "nt2": "///B/18", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 18, "nt1": "///B/108", "nt2": "///B/17", "bp": "C+A", "name": "--", "Saenger": "--", "LW": "cWH", "DSSR": "cW+M" }, { "index": 19, "nt1": "///B/68", "nt2": "///B/16", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 20, "nt1": "///B/69", "nt2": "///B/107", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 21, "nt1": "///B/70", "nt2": "///B/106", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 22, "nt1": "///B/71", "nt2": "///B/105", "bp": "C-G", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 23, "nt1": "///B/72", "nt2": "///B/104", "bp": "G-A", "name": "Sheared", "Saenger": "11-XI", "LW": "tSH", "DSSR": "tm-M" }, { "index": 24, "nt1": "///B/73", "nt2": "///B/103", "bp": "A-U", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tHW", "DSSR": "tM-W" }, { "index": 25, "nt1": "///B/74", "nt2": "///B/102", "bp": "U-G", "name": "--", "Saenger": "--", "LW": "t.W", "DSSR": "t.-W" }, { "index": 26, "nt1": "///B/75", "nt2": "///B/101", "bp": "G-A", "name": "--", "Saenger": "--", "LW": "cWW", "DSSR": "cW-W" }, { "index": 27, "nt1": "///B/76", "nt2": "///B/100", "bp": "G-G", "name": "--", "Saenger": "--", "LW": "tWH", "DSSR": "tW-M" }, { "index": 28, "nt1": "///B/77", "nt2": "///B/99", "bp": "U-A", "name": "rHoogsteen", "Saenger": "24-XXIV", "LW": "tWH", "DSSR": "tW-M" }, { "index": 29, "nt1": "///B/78", "nt2": "///B/98", "bp": "A-G", "name": "Sheared", "Saenger": "11-XI", "LW": "tHS", "DSSR": "tM-m" }, { "index": 30, "nt1": "///B/79", "nt2": "///B/97", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 31, "nt1": "///B/80", "nt2": "///B/96", "bp": "U-G", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 32, "nt1": "///B/81", "nt2": "///B/95", "bp": "G-U", "name": "Wobble", "Saenger": "28-XXVIII", "LW": "cWW", "DSSR": "cW-W" }, { "index": 33, "nt1": "///B/82", "nt2": "///B/94", "bp": "U-A", "name": "WC", "Saenger": "20-XX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 34, "nt1": "///B/83", "nt2": "///B/93", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 35, "nt1": "///B/84", "nt2": "///B/92", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 36, "nt1": "///B/85", "nt2": "///B/91", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" }, { "index": 37, "nt1": "///B/86", "nt2": "///B/90", "bp": "G-C", "name": "WC", "Saenger": "19-XIX", "LW": "cWW", "DSSR": "cW-W" } ] } ], "num_ntAA_contacts": 1182, "ntAA_contacts": [ { "index": 1, "ntaa": "C-lys", "nt": "///a/4", "aa": "///d/83", "trs_dist": 9.931, "rot_dist": -89.342, "six_params": [ -4.509, 5.737, 6.736, 16.585, 41.441, -79.518 ], "C_alpha": [ 1.643, 4.620, 8.617 ] }, { "index": 2, "ntaa": "U-ser", "nt": "///a/5", "aa": "///e/101", "trs_dist": 3.017, "rot_dist": 70.978, "six_params": [ -1.480, -1.157, 2.361, 14.757, 12.145, 68.685 ], "C_alpha": [ -0.184, -1.889, 2.337 ] }, { "index": 3, "ntaa": "G-ser", "nt": "///a/6", "aa": "///e/101", "trs_dist": -4.596, "rot_dist": -76.644, "six_params": [ 0.919, -4.214, -1.589, -15.223, 74.501, -10.424 ], "C_alpha": [ -0.458, -4.390, -1.274 ] }, { "index": 4, "ntaa": "G-thr", "nt": "///a/6", "aa": "///e/104", "trs_dist": -7.404, "rot_dist": -135.261, "six_params": [ -0.072, -7.294, -1.272, 15.919, -33.957, -132.605 ], "C_alpha": [ -6.278, -3.236, -2.218 ] }, { "index": 5, "ntaa": "G-leu", "nt": "///a/6", "aa": "///e/125", "trs_dist": -8.379, "rot_dist": -177.592, "six_params": [ -1.258, -5.897, -5.818, 51.167, 16.747, -177.300 ], "C_alpha": [ -2.895, 2.187, -7.549 ] }, { "index": 6, "ntaa": "A-tyr", "nt": "///a/7", "aa": "///e/96", "trs_dist": 7.199, "rot_dist": 121.752, "six_params": [ 0.539, 4.369, 5.696, 67.134, -56.325, 95.167 ], "C_alpha": [ -2.201, -1.590, 6.657 ] }, { "index": 7, "ntaa": "A-gln", "nt": "///a/7", "aa": "///e/98", "trs_dist": 7.909, "rot_dist": 119.926, "six_params": [ 6.566, 1.034, 4.285, 53.342, -52.388, 101.907 ], "C_alpha": [ 3.740, 2.079, 6.637 ] }, { "index": 8, "ntaa": "A-leu", "nt": "///a/7", "aa": "///e/125", "trs_dist": 9.155, "rot_dist": -82.513, "six_params": [ -2.507, 8.772, 0.761, 71.521, 29.718, -31.010 ], "C_alpha": [ 0.241, 6.661, 6.262 ] }, { "index": 9, "ntaa": "A-tyr", "nt": "///a/7", "aa": "///e/129", "trs_dist": 11.266, "rot_dist": -74.986, "six_params": [ -8.033, -5.119, 6.016, 44.085, 15.311, -60.439 ], "C_alpha": [ -9.937, -2.542, 4.637 ] }, { "index": 10, "ntaa": "A-gln", "nt": "///a/8", "aa": "///d/54", "trs_dist": -8.161, "rot_dist": 113.578, "six_params": [ -3.031, -7.553, -0.601, 13.546, -1.252, 113.045 ], "C_alpha": [ 4.532, -6.609, -1.520 ] }, { "index": 11, "ntaa": "A-glu", "nt": "///a/8", "aa": "///d/202", "trs_dist": -6.291, "rot_dist": -136.426, "six_params": [ 2.662, 4.789, -3.090, 19.853, 52.857, -130.170 ], "C_alpha": [ 5.351, 1.151, -3.101 ] }, { "index": 12, "ntaa": "A-ser", "nt": "///a/8", "aa": "///d/205", "trs_dist": 6.968, "rot_dist": -169.139, "six_params": [ -3.761, 5.140, -2.825, 56.335, 39.363, -166.833 ], "C_alpha": [ 5.028, 4.651, 1.256 ] }, { "index": 13, "ntaa": "A-lys", "nt": "///a/8", "aa": "///d/206", "trs_dist": 5.279, "rot_dist": -62.413, "six_params": [ 1.378, 1.270, 4.936, -56.637, 12.073, -24.360 ], "C_alpha": [ 2.512, 2.965, 3.574 ] }, { "index": 14, "ntaa": "A-ile", "nt": "///a/8", "aa": "///e/107", "trs_dist": -6.743, "rot_dist": -133.746, "six_params": [ -0.166, 2.828, -6.119, -5.725, 79.130, -118.638 ], "C_alpha": [ 0.134, 4.822, -4.722 ] }, { "index": 15, "ntaa": "A-ala", "nt": "///a/8", "aa": "///e/108", "trs_dist": -7.249, "rot_dist": -144.134, "six_params": [ -2.746, -3.580, -5.674, 52.420, 69.364, -129.791 ], "C_alpha": [ -3.612, 4.788, -4.111 ] }, { "index": 16, "ntaa": "A-gly", "nt": "///a/8", "aa": "///e/109", "trs_dist": -7.050, "rot_dist": -69.933, "six_params": [ -5.205, 1.914, -4.353, -25.879, 55.771, -35.096 ], "C_alpha": [ -6.059, 3.172, -1.780 ] }, { "index": 17, "ntaa": "G-lys", "nt": "///a/15", "aa": "///e/24", "trs_dist": -7.413, "rot_dist": 77.548, "six_params": [ -5.926, 3.131, -3.166, 52.683, 19.145, 55.939 ], "C_alpha": [ -7.367, 0.565, -0.463 ] }, { "index": 18, "ntaa": "G-thr", "nt": "///a/15", "aa": "///e/25", "trs_dist": -7.576, "rot_dist": -155.849, "six_params": [ -5.007, -5.629, -0.807, 8.542, -58.449, -152.174 ], "C_alpha": [ -6.230, 2.463, -3.547 ] }, { "index": 19, "ntaa": "A-pro", "nt": "///a/32", "aa": "///l/28", "trs_dist": -7.081, "rot_dist": 42.111, "six_params": [ -7.020, -0.488, 0.794, -2.987, -34.217, 24.742 ], "C_alpha": [ -6.691, -2.012, -1.297 ] }, { "index": 20, "ntaa": "A-pro", "nt": "///a/33", "aa": "///l/28", "trs_dist": -7.678, "rot_dist": -33.625, "six_params": [ -6.835, 2.743, -2.169, -17.905, -28.293, -3.136 ], "C_alpha": [ -6.017, 2.380, -4.161 ] }, { "index": 21, "ntaa": "A-gln", "nt": "///a/33", "aa": "///l/29", "trs_dist": -9.213, "rot_dist": -119.744, "six_params": [ -5.963, -5.560, -4.289, 41.430, 74.554, -93.940 ], "C_alpha": [ -8.665, 2.736, -1.444 ] }, { "index": 22, "ntaa": "G-ser", "nt": "///a/35", "aa": "///l/115", "trs_dist": 7.299, "rot_dist": 127.537, "six_params": [ -0.307, 7.292, -0.001, 16.730, 16.679, 126.312 ], "C_alpha": [ -6.530, 3.046, 1.098 ] }, { "index": 23, "ntaa": "G-ser", "nt": "///a/61", "aa": "///t/6", "trs_dist": -7.843, "rot_dist": 15.554, "six_params": [ 5.809, 4.812, -2.147, 10.414, 9.196, 7.012 ], "C_alpha": [ 5.322, 5.358, -2.170 ] }, { "index": 24, "ntaa": "C-lys", "nt": "///a/97", "aa": "///t/9", "trs_dist": 13.173, "rot_dist": -81.926, "six_params": [ -3.558, 12.116, 3.753, 11.638, 23.997, -78.198 ], "C_alpha": [ 5.346, 10.645, 5.609 ] }, { "index": 25, "ntaa": "G-lys", "nt": "///a/98", "aa": "///t/9", "trs_dist": 11.490, "rot_dist": -121.382, "six_params": [ -2.462, 11.209, 0.568, 22.402, 8.168, -119.959 ], "C_alpha": [ 8.236, 7.453, 2.906 ] }, { "index": 26, "ntaa": "C-arg", "nt": "///a/100", "aa": "///t/10", "trs_dist": 9.556, "rot_dist": 177.041, "six_params": [ 3.230, -7.360, 5.168, 38.816, -32.985, 176.722 ], "C_alpha": [ 8.845, 1.748, 3.155 ] }, { "index": 27, "ntaa": "G-ser", "nt": "///a/101", "aa": "///t/6", "trs_dist": -4.854, "rot_dist": 145.518, "six_params": [ -3.807, -2.694, -1.348, -5.793, -0.565, 145.472 ], "C_alpha": [ 1.504, -4.461, -1.217 ] }, { "index": 28, "ntaa": "G-arg", "nt": "///a/101", "aa": "///t/10", "trs_dist": 6.986, "rot_dist": 143.685, "six_params": [ 1.469, -6.525, 2.017, 19.629, -36.192, 141.112 ], "C_alpha": [ 6.726, -1.381, 1.252 ] }, { "index": 29, "ntaa": "G-arg", "nt": "///a/102", "aa": "///t/10", "trs_dist": 6.118, "rot_dist": -51.761, "six_params": [ 5.807, 1.079, 1.595, 27.219, -41.817, -14.238 ], "C_alpha": [ 4.835, -0.154, 3.745 ] }, { "index": 30, "ntaa": "G-arg", "nt": "///a/121", "aa": "///q/9", "trs_dist": 13.733, "rot_dist": -71.949, "six_params": [ -12.984, 3.937, 2.124, 57.686, -13.410, -42.861 ], "C_alpha": [ -11.302, 7.443, 2.286 ] }, { "index": 31, "ntaa": "G-glu", "nt": "///a/121", "aa": "///q/66", "trs_dist": 11.309, "rot_dist": 40.718, "six_params": [ -11.095, 2.182, -0.145, -7.007, 27.556, 29.453 ], "C_alpha": [ -11.044, -0.571, 2.365 ] }, { "index": 32, "ntaa": "A-arg", "nt": "///a/124", "aa": "///q/68", "trs_dist": -7.393, "rot_dist": -19.519, "six_params": [ 3.568, 5.725, -3.024, 9.152, 4.837, -16.570 ], "C_alpha": [ 4.251, 5.386, -2.705 ] }, { "index": 33, "ntaa": "A-pro", "nt": "///a/124", "aa": "///q/69", "trs_dist": -7.564, "rot_dist": 97.726, "six_params": [ 6.918, -2.155, -2.169, 52.065, 49.363, 71.444 ], "C_alpha": [ 4.464, 2.766, -5.499 ] }, { "index": 34, "ntaa": "G-arg", "nt": "///a/128", "aa": "///p/25", "trs_dist": -7.232, "rot_dist": -88.438, "six_params": [ 4.085, -5.631, -1.973, 37.286, -65.458, -50.252 ], "C_alpha": [ 2.354, -6.738, -1.113 ] }, { "index": 35, "ntaa": "C-met", "nt": "///a/129", "aa": "///p/1", "trs_dist": 3.800, "rot_dist": 126.423, "six_params": [ 1.855, 1.362, 3.023, -4.705, -77.644, 109.229 ], "C_alpha": [ -1.474, 0.520, 3.465 ] }, { "index": 36, "ntaa": "C-gly", "nt": "///a/130", "aa": "///p/64", "trs_dist": 7.266, "rot_dist": 170.743, "six_params": [ 1.998, 6.863, 1.304, 16.823, 11.020, 170.598 ], "C_alpha": [ -6.446, 2.684, 2.078 ] }, { "index": 37, "ntaa": "G-lys", "nt": "///a/171", "aa": "///t/64", "trs_dist": -11.828, "rot_dist": 109.107, "six_params": [ -9.131, 1.397, 7.387, -33.040, -79.219, 75.274 ], "C_alpha": [ -10.623, -5.147, -0.694 ] }, { "index": 38, "ntaa": "C-lys", "nt": "///a/179", "aa": "///t/76", "trs_dist": 11.959, "rot_dist": 80.342, "six_params": [ -10.817, 2.706, 4.323, -53.265, 58.295, 16.195 ], "C_alpha": [ -8.442, 4.362, 7.255 ] }, { "index": 39, "ntaa": "G-lys", "nt": "///a/182", "aa": "///t/84", "trs_dist": -6.486, "rot_dist": -80.795, "six_params": [ 2.252, -2.278, -5.640, -42.180, 30.410, -64.157 ], "C_alpha": [ -1.546, -4.036, -4.850 ] }, { "index": 40, "ntaa": "G-gln", "nt": "///a/221", "aa": "///p/63", "trs_dist": 7.906, "rot_dist": 91.857, "six_params": [ -5.439, 5.722, 0.415, 37.534, -31.265, 80.378 ], "C_alpha": [ -7.847, 0.611, 0.773 ] }, { "index": 41, "ntaa": "U-arg", "nt": "///a/229", "aa": "///q/9", "trs_dist": -12.207, "rot_dist": -171.741, "six_params": [ 1.606, -11.785, -2.750, -24.583, 57.176, -170.349 ], "C_alpha": [ -12.053, -1.739, -0.712 ] }, { "index": 42, "ntaa": "U-glu", "nt": "///a/229", "aa": "///q/66", "trs_dist": -11.364, "rot_dist": 137.337, "six_params": [ 2.122, 11.063, -1.502, -7.589, 25.674, 136.085 ], "C_alpha": [ -9.515, 5.614, -2.655 ] }, { "index": 43, "ntaa": "G-arg", "nt": "///a/253", "aa": "///t/78", "trs_dist": 14.118, "rot_dist": -151.462, "six_params": [ -7.014, 10.183, 6.813, 41.107, -60.420, -144.270 ], "C_alpha": [ 4.341, 12.283, 5.435 ] }, { "index": 44, "ntaa": "G-arg", "nt": "///a/254", "aa": "///t/78", "trs_dist": 12.237, "rot_dist": 169.608, "six_params": [ 5.478, -9.789, 4.892, -5.700, 85.597, 165.798 ], "C_alpha": [ 10.502, 6.273, 0.309 ] }, { "index": 45, "ntaa": "U-arg", "nt": "///a/255", "aa": "///t/74", "trs_dist": 10.029, "rot_dist": 71.557, "six_params": [ 8.610, 5.132, -0.346, 63.802, -28.382, 16.725 ], "C_alpha": [ 7.431, 5.112, 4.406 ] }, { "index": 46, "ntaa": "A-pro", "nt": "///a/258", "aa": "///q/69", "trs_dist": 8.478, "rot_dist": -76.283, "six_params": [ -8.322, -0.086, -1.618, -55.881, 22.306, -49.284 ], "C_alpha": [ -7.908, 3.130, 0.216 ] }, { "index": 47, "ntaa": "C-arg", "nt": "///a/274", "aa": "///q/43", "trs_dist": -4.014, "rot_dist": 173.594, "six_params": [ -1.879, 2.770, -2.216, -30.016, -82.041, 171.138 ], "C_alpha": [ -1.975, 0.425, -3.485 ] }, { "index": 48, "ntaa": "C-ser", "nt": "///a/274", "aa": "///q/44", "trs_dist": -2.440, "rot_dist": 63.463, "six_params": [ -1.940, -1.427, 0.391, -25.119, -57.500, 10.030 ], "C_alpha": [ -1.833, -1.580, -0.290 ] }, { "index": 49, "ntaa": "G-arg", "nt": "///a/320", "aa": "///p/25", "trs_dist": -9.698, "rot_dist": -78.420, "six_params": [ 5.663, -4.319, -6.583, 37.909, 35.720, -60.825 ], "C_alpha": [ 1.879, -3.065, -8.992 ] }, { "index": 50, "ntaa": "A-asn", "nt": "///a/357", "aa": "///l/26", "trs_dist": -7.166, "rot_dist": -59.802, "six_params": [ 2.945, 2.229, -6.141, -27.572, -7.654, -53.077 ], "C_alpha": [ 3.343, -0.855, -6.270 ] }, { "index": 51, "ntaa": "A-cys", "nt": "///a/357", "aa": "///l/27", "trs_dist": -4.698, "rot_dist": -115.422, "six_params": [ 1.302, 0.681, -4.462, 12.655, 46.807, -108.272 ], "C_alpha": [ 0.640, 1.154, -4.499 ] }, { "index": 52, "ntaa": "A-pro", "nt": "///a/357", "aa": "///l/28", "trs_dist": -6.509, "rot_dist": -141.316, "six_params": [ -5.116, -1.600, -3.693, -10.636, -55.938, -135.733 ], "C_alpha": [ -2.950, 1.880, -5.531 ] }, { "index": 53, "ntaa": "A-gln", "nt": "///a/357", "aa": "///l/29", "trs_dist": -7.889, "rot_dist": 165.546, "six_params": [ 5.520, 2.099, -5.231, 42.363, 10.252, 164.427 ], "C_alpha": [ -3.225, 5.560, -4.579 ] }, { "index": 54, "ntaa": "U-arg", "nt": "///a/369", "aa": "///p/28", "trs_dist": 9.778, "rot_dist": -166.897, "six_params": [ -1.638, -9.601, 0.865, -54.611, -25.649, -164.833 ], "C_alpha": [ -8.451, 1.168, 4.753 ] }, { "index": 55, "ntaa": "C-ala", "nt": "///a/397", "aa": "///d/2", "trs_dist": 6.354, "rot_dist": -71.724, "six_params": [ 1.029, -0.818, 6.217, -60.904, 21.284, -33.189 ], "C_alpha": [ 2.749, 1.658, 5.487 ] }, { "index": 56, "ntaa": "G-ala", "nt": "///a/398", "aa": "///d/2", "trs_dist": 5.687, "rot_dist": -96.138, "six_params": [ 1.618, 3.217, 4.401, -69.420, 44.330, -54.781 ], "C_alpha": [ 4.667, 3.107, 0.952 ] }, { "index": 57, "ntaa": "U-ala", "nt": "///a/399", "aa": "///d/2", "trs_dist": -5.295, "rot_dist": -123.524, "six_params": [ 1.815, 4.897, 0.873, -61.937, 56.427, -101.072 ], "C_alpha": [ 4.280, 1.729, -2.583 ] }, { "index": 58, "ntaa": "U-arg", "nt": "///a/399", "aa": "///d/3", "trs_dist": 7.067, "rot_dist": 104.930, "six_params": [ 6.326, -2.119, -2.331, -11.736, -39.046, 98.924 ], "C_alpha": [ 6.058, 3.657, 0.143 ] }, { "index": 59, "ntaa": "U-ile", "nt": "///a/399", "aa": "///d/5", "trs_dist": 8.451, "rot_dist": 176.989, "six_params": [ 6.475, -5.040, 2.021, -28.671, -61.104, 176.379 ], "C_alpha": [ 4.109, 4.123, 6.117 ] }, { "index": 60, "ntaa": "G-gln", "nt": "///a/400", "aa": "///d/116", "trs_dist": -11.188, "rot_dist": 148.363, "six_params": [ -0.411, 11.139, -0.958, -2.580, 89.297, 134.925 ], "C_alpha": [ -10.675, 3.278, -0.612 ] }, { "index": 61, "ntaa": "U-gln", "nt": "///a/401", "aa": "///d/116", "trs_dist": -12.586, "rot_dist": -91.880, "six_params": [ -10.443, 6.085, -3.509, 66.065, -58.164, -29.564 ], "C_alpha": [ -5.978, 10.265, -4.139 ] }, { "index": 62, "ntaa": "G-lys", "nt": "///a/404", "aa": "///d/31", "trs_dist": 10.163, "rot_dist": -85.291, "six_params": [ -0.383, 8.633, 5.348, 19.246, 78.463, -30.054 ], "C_alpha": [ 5.410, 6.497, 5.651 ] }, { "index": 63, "ntaa": "G-ser", "nt": "///a/407", "aa": "///d/30", "trs_dist": -5.980, "rot_dist": -165.647, "six_params": [ 3.745, 4.653, -0.304, -35.686, -7.607, -164.883 ], "C_alpha": [ 4.837, -3.203, -1.474 ] }, { "index": 64, "ntaa": "G-lys", "nt": "///a/407", "aa": "///d/33", "trs_dist": 5.510, "rot_dist": 126.195, "six_params": [ -0.885, -4.591, 2.915, -29.500, -73.112, 108.293 ], "C_alpha": [ 1.442, -4.490, 2.824 ] }, { "index": 65, "ntaa": "U-arg", "nt": "///a/415", "aa": "///c/127", "trs_dist": 8.681, "rot_dist": 66.156, "six_params": [ 8.205, 1.176, 2.581, -6.639, -53.235, 40.244 ], "C_alpha": [ 5.327, 3.470, 5.890 ] }, { "index": 66, "ntaa": "U-gln", "nt": "///a/431", "aa": "///d/116", "trs_dist": -11.905, "rot_dist": 150.597, "six_params": [ -1.205, 11.505, -2.812, 12.330, -85.439, 139.280 ], "C_alpha": [ -10.821, 4.638, -1.750 ] }, { "index": 67, "ntaa": "U-ser", "nt": "///a/433", "aa": "///d/119", "trs_dist": -8.315, "rot_dist": 133.777, "six_params": [ -1.174, 8.006, -1.914, -35.049, -69.329, 119.475 ], "C_alpha": [ -5.629, 4.240, -4.422 ] }, { "index": 68, "ntaa": "U-his", "nt": "///a/433", "aa": "///d/120", "trs_dist": -9.163, "rot_dist": 173.420, "six_params": [ 5.124, 2.275, -7.247, 32.674, -39.648, 172.698 ], "C_alpha": [ -3.469, 7.376, -4.207 ] }, { "index": 69, "ntaa": "A-ala", "nt": "///a/493", "aa": "///d/2", "trs_dist": 5.897, "rot_dist": -165.479, "six_params": [ 0.175, 5.325, 2.527, -19.407, 30.923, -164.705 ], "C_alpha": [ 5.698, 0.036, 1.471 ] }, { "index": 70, "ntaa": "C-his", "nt": "///a/505", "aa": "///d/41", "trs_dist": -11.234, "rot_dist": -140.229, "six_params": [ -7.665, -7.662, -2.958, 36.265, 17.354, -137.529 ], "C_alpha": [ -9.073, 5.285, -4.001 ] }, { "index": 71, "ntaa": "C-ser", "nt": "///a/512", "aa": "///l/47", "trs_dist": -7.121, "rot_dist": -139.302, "six_params": [ -4.247, -5.676, -0.677, 54.897, 29.339, -132.067 ], "C_alpha": [ -6.437, 2.192, -2.106 ] }, { "index": 72, "ntaa": "G-ala", "nt": "///a/515", "aa": "///l/48", "trs_dist": -7.690, "rot_dist": -164.606, "six_params": [ -3.255, 6.885, 1.067, -50.920, -14.176, -162.797 ], "C_alpha": [ 6.015, 4.122, -2.376 ] }, { "index": 73, "ntaa": "G-arg", "nt": "///a/515", "aa": "///l/50", "trs_dist": 10.623, "rot_dist": -122.865, "six_params": [ -2.866, 6.451, 7.939, -76.098, 4.144, -105.152 ], "C_alpha": [ 6.316, 8.201, 2.371 ] }, { "index": 74, "ntaa": "C-asn", "nt": "///a/516", "aa": "///l/46", "trs_dist": -7.409, "rot_dist": -136.652, "six_params": [ 4.139, 0.206, -6.141, 81.649, -23.425, -119.907 ], "C_alpha": [ 5.928, -2.557, -3.613 ] }, { "index": 75, "ntaa": "C-arg", "nt": "///a/516", "aa": "///l/50", "trs_dist": -11.975, "rot_dist": -143.106, "six_params": [ -3.380, 10.084, 5.502, -68.290, 15.501, -134.545 ], "C_alpha": [ 9.479, 7.276, -0.705 ] }, { "index": 76, "ntaa": "C-asp", "nt": "///a/516", "aa": "///l/89", "trs_dist": 7.679, "rot_dist": 106.940, "six_params": [ 1.342, -4.389, 6.157, -0.994, 73.379, 84.138 ], "C_alpha": [ 6.453, -0.032, 4.165 ] }, { "index": 77, "ntaa": "A-arg", "nt": "///a/517", "aa": "///l/50", "trs_dist": -9.872, "rot_dist": 178.075, "six_params": [ -1.013, -9.593, 2.096, 43.047, -35.250, 177.824 ], "C_alpha": [ 9.604, -1.219, -1.909 ] }, { "index": 78, "ntaa": "A-val", "nt": "///a/517", "aa": "///l/87", "trs_dist": 5.800, "rot_dist": -79.724, "six_params": [ 0.945, 4.228, 3.857, 75.507, 15.836, -21.874 ], "C_alpha": [ 1.797, 0.711, 5.464 ] }, { "index": 79, "ntaa": "A-lys", "nt": "///a/517", "aa": "///l/88", "trs_dist": 4.688, "rot_dist": -29.829, "six_params": [ 0.253, -1.962, 4.250, -4.472, -23.519, -17.925 ], "C_alpha": [ -0.900, -1.677, 4.280 ] }, { "index": 80, "ntaa": "A-asp", "nt": "///a/517", "aa": "///l/89", "trs_dist": 3.706, "rot_dist": 67.011, "six_params": [ -0.593, -3.075, 1.982, 19.629, 56.894, 30.959 ], "C_alpha": [ 1.185, -3.184, 1.488 ] }, { "index": 81, "ntaa": "G-asn", "nt": "///a/521", "aa": "///l/46", "trs_dist": 8.001, "rot_dist": 93.141, "six_params": [ 7.795, 1.022, -1.486, -34.940, -82.755, 27.775 ], "C_alpha": [ 6.398, 3.008, 3.726 ] }, { "index": 82, "ntaa": "C-asn", "nt": "///a/522", "aa": "///l/46", "trs_dist": 8.240, "rot_dist": -104.556, "six_params": [ 2.150, 7.138, 3.512, -12.320, 79.734, -73.222 ], "C_alpha": [ 7.313, 3.741, 0.584 ] }, { "index": 83, "ntaa": "G-asn", "nt": "///a/523", "aa": "///l/46", "trs_dist": 4.555, "rot_dist": -124.090, "six_params": [ 3.306, 3.074, 0.606, 37.043, 50.950, -113.297 ], "C_alpha": [ 4.378, -1.261, 0.051 ] }, { "index": 84, "ntaa": "G-ser", "nt": "///a/523", "aa": "///l/47", "trs_dist": 4.003, "rot_dist": -87.871, "six_params": [ 0.806, -1.604, 3.578, 4.760, 73.738, -51.407 ], "C_alpha": [ 1.754, -2.764, 2.339 ] }, { "index": 85, "ntaa": "A-tyr", "nt": "///a/526", "aa": "///c/193", "trs_dist": -5.186, "rot_dist": -131.409, "six_params": [ 2.628, -2.542, -3.677, 70.192, -38.472, -115.004 ], "C_alpha": [ 1.850, -3.393, -3.430 ] }, { "index": 86, "ntaa": "A-gln", "nt": "///a/532", "aa": "///l/112", "trs_dist": 11.926, "rot_dist": 100.873, "six_params": [ 10.485, 5.612, 0.892, 6.327, -49.283, 90.843 ], "C_alpha": [ 2.517, 10.276, 5.472 ] }, { "index": 87, "ntaa": "A-gln", "nt": "///a/533", "aa": "///l/112", "trs_dist": 12.166, "rot_dist": 75.577, "six_params": [ 11.327, 3.944, -2.040, -16.247, -50.908, 55.558 ], "C_alpha": [ 8.073, 8.735, 2.484 ] }, { "index": 88, "ntaa": "G-gln", "nt": "///a/534", "aa": "///d/40", "trs_dist": 9.197, "rot_dist": -131.233, "six_params": [ -1.469, -8.206, 3.886, -37.517, -76.043, -112.021 ], "C_alpha": [ -8.060, -0.174, 4.422 ] }, { "index": 89, "ntaa": "A-arg", "nt": "///a/540", "aa": "///d/3", "trs_dist": -6.207, "rot_dist": -68.031, "six_params": [ 1.945, -1.312, -5.746, -20.251, 58.183, -30.398 ], "C_alpha": [ -1.599, -2.007, -5.664 ] }, { "index": 90, "ntaa": "A-leu", "nt": "///a/540", "aa": "///d/68", "trs_dist": -8.664, "rot_dist": -149.759, "six_params": [ -0.097, -6.888, -5.255, -47.802, 60.927, -140.935 ], "C_alpha": [ -8.479, -0.954, -1.393 ] }, { "index": 91, "ntaa": "U-pro", "nt": "///a/546", "aa": "///l/28", "trs_dist": 6.683, "rot_dist": 158.922, "six_params": [ 0.226, 6.679, 0.015, 42.939, 20.407, 156.943 ], "C_alpha": [ -6.022, 1.718, 2.404 ] }, { "index": 92, "ntaa": "U-gln", "nt": "///a/546", "aa": "///l/29", "trs_dist": 9.407, "rot_dist": -129.006, "six_params": [ -7.045, -5.732, 2.450, 67.473, 25.044, -115.721 ], "C_alpha": [ -9.129, 2.216, 0.254 ] }, { "index": 93, "ntaa": "A-tyr", "nt": "///a/554", "aa": "///e/129", "trs_dist": -7.569, "rot_dist": -164.659, "six_params": [ -2.020, -2.889, -6.698, 73.908, 38.199, -159.436 ], "C_alpha": [ 0.640, 4.434, -6.084 ] }, { "index": 94, "ntaa": "U-arg", "nt": "///a/556", "aa": "///l/12", "trs_dist": -6.021, "rot_dist": 96.643, "six_params": [ -2.890, 5.234, 0.711, -22.455, -1.185, 94.631 ], "C_alpha": [ -5.830, 1.460, -0.354 ] }, { "index": 95, "ntaa": "U-lys", "nt": "///a/556", "aa": "///l/13", "trs_dist": 4.794, "rot_dist": 126.585, "six_params": [ -0.118, 1.879, 4.409, -46.386, -61.234, 110.002 ], "C_alpha": [ -3.966, 0.208, 2.701 ] }, { "index": 96, "ntaa": "U-arg", "nt": "///a/556", "aa": "///l/14", "trs_dist": 5.892, "rot_dist": 125.568, "six_params": [ 2.311, 4.273, 3.334, 25.976, -21.868, 122.866 ], "C_alpha": [ -2.216, 2.982, 4.586 ] }, { "index": 97, "ntaa": "U-met", "nt": "///a/556", "aa": "///l/15", "trs_dist": 6.154, "rot_dist": 69.873, "six_params": [ 0.319, -1.248, 6.018, -57.639, 28.759, 28.665 ], "C_alpha": [ 1.335, 2.153, 5.608 ] }, { "index": 98, "ntaa": "A-arg", "nt": "///a/557", "aa": "///l/12", "trs_dist": 9.584, "rot_dist": 63.295, "six_params": [ -8.538, 2.210, 3.751, -23.590, 5.632, 58.915 ], "C_alpha": [ -8.726, -1.513, 3.629 ] }, { "index": 99, "ntaa": "C-ile", "nt": "///a/558", "aa": "///q/36", "trs_dist": -7.074, "rot_dist": 81.772, "six_params": [ -2.446, 6.377, -1.842, -81.713, -0.839, 3.291 ], "C_alpha": [ -2.512, 3.558, -5.573 ] }, { "index": 100, "ntaa": "C-tyr", "nt": "///a/558", "aa": "///q/37", "trs_dist": -8.987, "rot_dist": -128.559, "six_params": [ -6.307, 1.654, -6.185, -40.071, 34.399, -122.036 ], "C_alpha": [ -4.019, 6.812, -4.291 ] }, { "index": 101, "ntaa": "G-ala", "nt": "///a/561", "aa": "///l/2", "trs_dist": 7.031, "rot_dist": 99.949, "six_params": [ 6.326, -3.049, -0.341, 24.661, -48.729, 87.264 ], "C_alpha": [ 6.581, 1.844, 1.646 ] }, { "index": 102, "ntaa": "G-arg", "nt": "///a/561", "aa": "///l/12", "trs_dist": -10.180, "rot_dist": -58.853, "six_params": [ 6.391, 1.351, -7.808, 12.943, 11.547, -56.458 ], "C_alpha": [ 5.975, -0.645, -8.205 ] }, { "index": 103, "ntaa": "G-ala", "nt": "///a/562", "aa": "///l/2", "trs_dist": -5.394, "rot_dist": 71.078, "six_params": [ 3.287, -1.810, -3.875, 7.236, -47.199, 54.287 ], "C_alpha": [ 4.810, 0.644, -2.347 ] }, { "index": 104, "ntaa": "U-gln", "nt": "///a/580", "aa": "///h/4", "trs_dist": 9.323, "rot_dist": 125.214, "six_params": [ -3.474, 4.453, 7.418, -78.495, 14.481, 106.287 ], "C_alpha": [ -8.287, 2.740, 3.286 ] }, { "index": 105, "ntaa": "G-tyr", "nt": "///a/591", "aa": "///h/86", "trs_dist": 10.140, "rot_dist": 78.645, "six_params": [ -6.522, -0.184, 7.761, -42.898, 9.993, 66.877 ], "C_alpha": [ -6.391, -0.902, 7.802 ] }, { "index": 106, "ntaa": "U-asn", "nt": "///a/592", "aa": "///h/107", "trs_dist": 7.491, "rot_dist": 60.735, "six_params": [ -6.147, -0.422, 4.260, 41.471, -42.072, 14.785 ], "C_alpha": [ -6.968, -2.380, 1.401 ] }, { "index": 107, "ntaa": "U-asn", "nt": "///a/593", "aa": "///h/107", "trs_dist": -8.156, "rot_dist": -67.331, "six_params": [ -8.086, 1.064, -0.098, 26.582, -61.677, -5.095 ], "C_alpha": [ -6.891, 1.864, -3.959 ] }, { "index": 108, "ntaa": "U-thr", "nt": "///a/613", "aa": "///d/129", "trs_dist": -8.668, "rot_dist": -54.156, "six_params": [ -4.404, 3.698, -6.486, -26.430, 46.299, -9.894 ], "C_alpha": [ -6.517, 2.928, -4.903 ] }, { "index": 109, "ntaa": "U-val", "nt": "///a/613", "aa": "///d/130", "trs_dist": -6.274, "rot_dist": 85.182, "six_params": [ -4.909, 3.570, -1.589, -69.647, 44.192, 23.481 ], "C_alpha": [ -5.937, 1.442, -1.435 ] }, { "index": 110, "ntaa": "U-asn", "nt": "///a/613", "aa": "///d/131", "trs_dist": -4.296, "rot_dist": -49.261, "six_params": [ -3.063, -1.519, -2.601, -18.673, 45.437, -3.779 ], "C_alpha": [ -3.818, -1.676, -0.947 ] }, { "index": 111, "ntaa": "U-ile", "nt": "///a/613", "aa": "///d/132", "trs_dist": 4.914, "rot_dist": 90.107, "six_params": [ -1.986, -1.197, 4.332, -39.644, -62.141, 56.014 ], "C_alpha": [ -3.564, -1.787, 2.852 ] }, { "index": 112, "ntaa": "C-ile", "nt": "///a/614", "aa": "///d/132", "trs_dist": -6.935, "rot_dist": -109.835, "six_params": [ 0.648, -0.857, -6.852, 1.244, 88.430, -73.363 ], "C_alpha": [ -3.918, 1.950, -5.359 ] }, { "index": 113, "ntaa": "A-asn", "nt": "///a/634", "aa": "///h/107", "trs_dist": 7.227, "rot_dist": 177.345, "six_params": [ 0.605, 6.742, -2.532, 60.845, -53.563, 176.507 ], "C_alpha": [ -6.971, 1.033, 1.625 ] }, { "index": 114, "ntaa": "A-ser", "nt": "///a/636", "aa": "///h/105", "trs_dist": -7.047, "rot_dist": 139.347, "six_params": [ -2.407, 4.311, -5.028, 83.117, -31.991, 121.677 ], "C_alpha": [ -6.611, 2.028, -1.357 ] }, { "index": 115, "ntaa": "A-thr", "nt": "///a/636", "aa": "///h/106", "trs_dist": -5.620, "rot_dist": 98.462, "six_params": [ -4.480, 1.527, -3.030, 54.781, -62.771, 58.142 ], "C_alpha": [ -3.773, 1.618, -3.845 ] }, { "index": 116, "ntaa": "A-asn", "nt": "///a/636", "aa": "///h/107", "trs_dist": -5.296, "rot_dist": 142.913, "six_params": [ 1.735, 0.199, -5.000, 24.692, -23.731, 141.125 ], "C_alpha": [ -0.254, 2.963, -4.380 ] }, { "index": 117, "ntaa": "C-tyr", "nt": "///a/637", "aa": "///h/86", "trs_dist": -9.800, "rot_dist": 137.986, "six_params": [ -2.596, 7.135, -6.196, -7.011, 73.335, 126.783 ], "C_alpha": [ -8.736, -2.232, -3.804 ] }, { "index": 118, "ntaa": "C-glu", "nt": "///a/637", "aa": "///h/124", "trs_dist": -8.810, "rot_dist": -124.406, "six_params": [ -2.957, -6.609, -5.020, 42.275, 57.781, -109.807 ], "C_alpha": [ -7.045, 1.834, -4.948 ] }, { "index": 119, "ntaa": "A-pro", "nt": "///a/647", "aa": "///h/28", "trs_dist": -6.220, "rot_dist": 84.844, "six_params": [ -6.164, 0.764, 0.331, 25.969, -21.261, 79.107 ], "C_alpha": [ -5.206, -3.310, -0.658 ] }, { "index": 120, "ntaa": "A-val", "nt": "///a/647", "aa": "///h/55", "trs_dist": -6.839, "rot_dist": 118.861, "six_params": [ 0.332, 2.773, -6.243, -72.593, -43.104, 93.266 ], "C_alpha": [ 2.851, 1.102, -6.120 ] }, { "index": 121, "ntaa": "A-lys", "nt": "///a/647", "aa": "///h/56", "trs_dist": -4.629, "rot_dist": -60.581, "six_params": [ -0.152, 1.759, -4.279, -42.315, 11.531, -42.872 ], "C_alpha": [ -0.545, 0.335, -4.567 ] }, { "index": 122, "ntaa": "G-gly", "nt": "///a/650", "aa": "///o/23", "trs_dist": 6.660, "rot_dist": 162.074, "six_params": [ -2.852, 5.606, -2.190, 37.114, 21.980, 160.712 ], "C_alpha": [ -6.377, -2.012, 0.269 ] }, { "index": 123, "ntaa": "G-gln", "nt": "///a/650", "aa": "///o/28", "trs_dist": 11.282, "rot_dist": -177.237, "six_params": [ -3.052, -10.462, -2.919, -46.591, 36.285, -176.825 ], "C_alpha": [ -10.644, 2.836, 2.447 ] }, { "index": 124, "ntaa": "U-thr", "nt": "///a/651", "aa": "///o/22", "trs_dist": 7.552, "rot_dist": -169.806, "six_params": [ -2.113, -5.802, 4.348, 61.088, -8.201, -168.124 ], "C_alpha": [ -7.360, 1.536, 0.637 ] }, { "index": 125, "ntaa": "U-gly", "nt": "///a/651", "aa": "///o/23", "trs_dist": -6.439, "rot_dist": 137.062, "six_params": [ 0.441, 4.730, -4.346, 36.060, 27.114, 133.304 ], "C_alpha": [ -5.559, 1.955, -2.667 ] }, { "index": 126, "ntaa": "A-thr", "nt": "///a/652", "aa": "///o/22", "trs_dist": -9.757, "rot_dist": 155.400, "six_params": [ 5.585, 7.966, 0.742, -65.280, 17.702, 150.285 ], "C_alpha": [ -5.283, 6.866, -4.483 ] }, { "index": 127, "ntaa": "G-ser", "nt": "///a/660", "aa": "///o/52", "trs_dist": -7.074, "rot_dist": -65.415, "six_params": [ -5.611, -2.780, 3.292, 51.571, -38.791, -11.348 ], "C_alpha": [ -6.468, -2.869, -0.197 ] }, { "index": 128, "ntaa": "G-his", "nt": "///a/661", "aa": "///o/42", "trs_dist": -10.659, "rot_dist": -179.144, "six_params": [ 6.618, -7.384, -3.910, -52.227, 64.882, -178.855 ], "C_alpha": [ -9.047, -4.578, -3.277 ] }, { "index": 129, "ntaa": "G-asn", "nt": "///a/661", "aa": "///o/46", "trs_dist": 9.764, "rot_dist": -170.611, "six_params": [ 0.610, -9.678, -1.141, -36.976, 21.496, -169.915 ], "C_alpha": [ -9.446, -1.507, 1.878 ] }, { "index": 130, "ntaa": "G-asp", "nt": "///a/661", "aa": "///o/49", "trs_dist": 9.056, "rot_dist": 126.319, "six_params": [ -0.492, 8.562, -2.909, 43.485, 17.778, 121.016 ], "C_alpha": [ -8.151, 3.837, 0.554 ] }, { "index": 131, "ntaa": "G-asn", "nt": "///a/662", "aa": "///o/46", "trs_dist": -10.386, "rot_dist": 155.188, "six_params": [ 3.378, 8.690, -4.576, 32.276, -33.185, 152.976 ], "C_alpha": [ -8.213, 6.273, -0.874 ] }, { "index": 132, "ntaa": "G-his", "nt": "///a/668", "aa": "///k/118", "trs_dist": 7.285, "rot_dist": -112.912, "six_params": [ -0.962, -5.668, 4.473, 12.642, -83.899, -83.068 ], "C_alpha": [ -6.608, -2.219, 2.079 ] }, { "index": 133, "ntaa": "A-pro", "nt": "///a/669", "aa": "///k/117", "trs_dist": 6.189, "rot_dist": 101.207, "six_params": [ -3.000, 5.282, -1.181, 6.348, 42.393, 94.026 ], "C_alpha": [ -6.003, 1.317, 0.250 ] }, { "index": 134, "ntaa": "A-his", "nt": "///a/669", "aa": "///k/118", "trs_dist": -6.317, "rot_dist": 86.386, "six_params": [ -3.226, -0.981, -5.342, 74.288, 42.717, 12.157 ], "C_alpha": [ -5.109, 1.456, -3.410 ] }, { "index": 135, "ntaa": "A-asn", "nt": "///a/669", "aa": "///k/119", "trs_dist": -5.770, "rot_dist": -37.443, "six_params": [ -2.719, -2.930, -4.161, -1.274, 30.346, -22.160 ], "C_alpha": [ -4.204, -2.208, -3.267 ] }, { "index": 136, "ntaa": "A-gly", "nt": "///a/669", "aa": "///k/120", "trs_dist": 4.509, "rot_dist": -76.200, "six_params": [ -3.235, -2.333, -2.103, -71.067, 27.493, -0.247 ], "C_alpha": [ -3.448, -2.885, 0.392 ] }, { "index": 137, "ntaa": "U-cys", "nt": "///a/671", "aa": "///k/121", "trs_dist": -8.288, "rot_dist": -104.021, "six_params": [ -2.703, -3.238, -7.134, 48.612, 70.361, -66.067 ], "C_alpha": [ -5.831, 3.138, -4.969 ] }, { "index": 138, "ntaa": "G-gly", "nt": "///a/677", "aa": "///k/39", "trs_dist": 6.819, "rot_dist": 98.774, "six_params": [ -6.248, 0.606, -2.665, -67.415, 48.875, 58.862 ], "C_alpha": [ -5.850, -3.502, 0.120 ] }, { "index": 139, "ntaa": "G-asn", "nt": "///a/677", "aa": "///k/40", "trs_dist": 6.343, "rot_dist": 132.762, "six_params": [ -2.090, 3.725, 4.689, -7.107, -44.626, 128.562 ], "C_alpha": [ -5.179, -1.565, 3.310 ] }, { "index": 140, "ntaa": "U-gly", "nt": "///a/678", "aa": "///k/39", "trs_dist": -8.114, "rot_dist": 117.521, "six_params": [ -5.843, 5.604, 0.544, 10.198, -81.311, 93.229 ], "C_alpha": [ -7.558, 0.326, -2.933 ] }, { "index": 141, "ntaa": "U-asn", "nt": "///a/678", "aa": "///k/40", "trs_dist": -6.771, "rot_dist": 113.048, "six_params": [ -1.291, 6.373, 1.889, -32.903, -27.834, 107.254 ], "C_alpha": [ -6.189, 2.734, -0.343 ] }, { "index": 142, "ntaa": "U-ala", "nt": "///a/678", "aa": "///k/41", "trs_dist": 6.528, "rot_dist": -75.324, "six_params": [ -5.216, -1.334, 3.692, -71.306, -11.948, -22.741 ], "C_alpha": [ -5.298, 1.984, 3.249 ] }, { "index": 143, "ntaa": "G-arg", "nt": "///a/684", "aa": "///k/53", "trs_dist": 9.325, "rot_dist": -88.612, "six_params": [ 5.390, 7.092, 2.757, 13.331, 48.098, -75.757 ], "C_alpha": [ 9.130, 1.592, 1.109 ] }, { "index": 144, "ntaa": "G-lys", "nt": "///a/684", "aa": "///k/57", "trs_dist": 12.296, "rot_dist": -162.257, "six_params": [ -3.284, 11.662, 2.098, 28.584, -29.939, -161.022 ], "C_alpha": [ 10.073, 5.835, 3.969 ] }, { "index": 145, "ntaa": "G-asn", "nt": "///a/685", "aa": "///k/28", "trs_dist": 8.801, "rot_dist": 16.792, "six_params": [ 6.276, 6.026, 1.322, 0.787, -16.244, 4.196 ], "C_alpha": [ 5.810, 6.243, 2.224 ] }, { "index": 146, "ntaa": "G-arg", "nt": "///a/685", "aa": "///k/53", "trs_dist": 6.330, "rot_dist": -115.437, "six_params": [ 5.540, 2.936, 0.869, 26.831, 20.734, -112.117 ], "C_alpha": [ 5.465, -3.167, 0.527 ] }, { "index": 147, "ntaa": "G-lys", "nt": "///a/685", "aa": "///k/57", "trs_dist": 9.031, "rot_dist": 159.334, "six_params": [ 0.947, -8.856, 1.493, -28.543, 53.962, 155.963 ], "C_alpha": [ 8.532, 0.259, 2.961 ] }, { "index": 148, "ntaa": "U-asn", "nt": "///a/686", "aa": "///k/28", "trs_dist": 8.913, "rot_dist": -41.528, "six_params": [ 6.434, 6.033, -1.286, -4.153, -39.051, -13.781 ], "C_alpha": [ 7.224, 5.203, 0.716 ] }, { "index": 149, "ntaa": "U-gly", "nt": "///a/686", "aa": "///k/54", "trs_dist": 3.396, "rot_dist": -134.591, "six_params": [ 2.500, 1.370, 1.845, -25.768, 16.250, -132.839 ], "C_alpha": [ 2.681, -1.796, 1.136 ] }, { "index": 150, "ntaa": "A-trp", "nt": "///a/698", "aa": "///k/44", "trs_dist": 8.546, "rot_dist": -63.070, "six_params": [ 6.974, -2.730, 4.117, -1.529, -5.255, -62.856 ], "C_alpha": [ 4.382, -5.803, 4.478 ] }, { "index": 151, "ntaa": "U-ile", "nt": "///a/699", "aa": "///k/31", "trs_dist": 7.999, "rot_dist": 58.744, "six_params": [ -7.463, 1.998, 2.074, 6.146, 4.476, 58.294 ], "C_alpha": [ -7.345, -1.944, 2.459 ] }, { "index": 152, "ntaa": "A-ala", "nt": "///a/700", "aa": "///k/41", "trs_dist": -6.218, "rot_dist": -137.891, "six_params": [ -0.175, -6.024, -1.530, -20.307, -50.127, -132.424 ], "C_alpha": [ -5.565, -2.734, -0.410 ] }, { "index": 153, "ntaa": "G-cys", "nt": "///a/708", "aa": "///k/121", "trs_dist": 8.562, "rot_dist": -153.484, "six_params": [ -2.249, -3.594, 7.439, 65.797, 53.382, -143.836 ], "C_alpha": [ -6.639, -2.879, 4.562 ] }, { "index": 154, "ntaa": "A-asn", "nt": "///a/710", "aa": "///k/119", "trs_dist": 6.504, "rot_dist": -147.811, "six_params": [ -2.912, -4.993, 2.981, 2.595, -11.634, -147.632 ], "C_alpha": [ -5.742, 1.662, 2.548 ] }, { "index": 155, "ntaa": "A-gly", "nt": "///a/710", "aa": "///k/120", "trs_dist": -6.814, "rot_dist": -156.354, "six_params": [ -2.745, -6.032, 1.585, 10.120, -83.008, -148.089 ], "C_alpha": [ -6.615, 1.162, -1.114 ] }, { "index": 156, "ntaa": "A-his", "nt": "///a/712", "aa": "///k/118", "trs_dist": -7.414, "rot_dist": 166.670, "six_params": [ 2.626, 3.055, -6.224, 8.990, -58.812, 164.636 ], "C_alpha": [ -2.712, 5.704, -3.889 ] }, { "index": 157, "ntaa": "A-lys", "nt": "///a/712", "aa": "///r/38", "trs_dist": 4.462, "rot_dist": 158.650, "six_params": [ -0.580, -1.653, 4.104, 5.173, -21.941, 158.225 ], "C_alpha": [ 1.535, -1.664, 3.846 ] }, { "index": 158, "ntaa": "A-arg", "nt": "///a/712", "aa": "///r/63", "trs_dist": -10.822, "rot_dist": -70.047, "six_params": [ 10.107, 1.647, -3.501, 57.115, 2.943, -42.287 ], "C_alpha": [ 10.499, -0.645, -2.536 ] }, { "index": 159, "ntaa": "A-tyr", "nt": "///a/712", "aa": "///r/70", "trs_dist": -5.411, "rot_dist": -119.478, "six_params": [ 4.520, 2.502, -1.608, -72.747, 2.234, -102.486 ], "C_alpha": [ 3.614, -2.846, -2.865 ] }, { "index": 160, "ntaa": "C-lys", "nt": "///a/713", "aa": "///r/38", "trs_dist": -6.120, "rot_dist": 106.068, "six_params": [ -2.249, 5.342, 1.965, -41.098, -17.002, 98.968 ], "C_alpha": [ -5.824, 1.869, -0.377 ] }, { "index": 161, "ntaa": "C-ile", "nt": "///a/713", "aa": "///r/39", "trs_dist": 6.188, "rot_dist": -86.467, "six_params": [ -5.047, -1.717, 3.142, -83.020, -5.151, -26.121 ], "C_alpha": [ -4.893, 1.878, 3.298 ] }, { "index": 162, "ntaa": "C-lys", "nt": "///a/713", "aa": "///r/60", "trs_dist": 5.740, "rot_dist": 76.593, "six_params": [ 0.185, -3.345, 4.660, 59.721, 18.117, 46.855 ], "C_alpha": [ 2.757, -4.480, 2.312 ] }, { "index": 163, "ntaa": "C-arg", "nt": "///a/713", "aa": "///r/63", "trs_dist": -7.524, "rot_dist": -114.798, "six_params": [ 4.930, -5.601, -0.965, 51.457, -60.531, -91.064 ], "C_alpha": [ 0.043, -7.492, -0.661 ] }, { "index": 164, "ntaa": "C-ile", "nt": "///a/714", "aa": "///r/39", "trs_dist": -10.505, "rot_dist": -115.575, "six_params": [ -8.829, 3.104, -4.772, -46.555, 7.957, -108.849 ], "C_alpha": [ -4.456, 8.093, -4.983 ] }, { "index": 165, "ntaa": "C-ala", "nt": "///a/714", "aa": "///r/56", "trs_dist": -8.014, "rot_dist": 76.524, "six_params": [ -7.124, 3.477, -1.174, 66.366, -26.517, 29.390 ], "C_alpha": [ -7.706, 2.121, -0.604 ] }, { "index": 166, "ntaa": "C-lys", "nt": "///a/714", "aa": "///r/60", "trs_dist": -8.950, "rot_dist": 77.160, "six_params": [ -8.469, -2.747, -0.905, 52.420, -56.180, 7.656 ], "C_alpha": [ -6.697, -1.621, -5.714 ] }, { "index": 167, "ntaa": "U-ala", "nt": "///a/717", "aa": "///u/52", "trs_dist": -8.073, "rot_dist": -160.689, "six_params": [ -3.052, 4.866, -5.673, -5.676, 78.903, -154.871 ], "C_alpha": [ 3.221, 6.900, -2.659 ] }, { "index": 168, "ntaa": "U-val", "nt": "///a/717", "aa": "///u/53", "trs_dist": -6.876, "rot_dist": 108.669, "six_params": [ 5.042, -0.220, -4.670, -22.485, -65.664, 89.658 ], "C_alpha": [ 5.358, 4.177, -1.084 ] }, { "index": 169, "ntaa": "A-arg", "nt": "///a/722", "aa": "///o/54", "trs_dist": -7.566, "rot_dist": -110.080, "six_params": [ 3.471, 0.713, -6.685, 77.209, 26.223, -81.669 ], "C_alpha": [ 4.767, 2.422, -5.356 ] }, { "index": 170, "ntaa": "A-his", "nt": "///a/723", "aa": "///o/51", "trs_dist": -7.784, "rot_dist": -163.198, "six_params": [ 1.615, 4.546, -6.109, 75.680, -33.800, -157.522 ], "C_alpha": [ 7.548, -1.333, -1.393 ] }, { "index": 171, "ntaa": "G-his", "nt": "///a/724", "aa": "///o/51", "trs_dist": -7.567, "rot_dist": 132.000, "six_params": [ -0.773, -7.455, 1.040, 83.126, -30.690, 110.728 ], "C_alpha": [ 4.925, -3.786, -4.324 ] }, { "index": 172, "ntaa": "C-asn", "nt": "///a/733", "aa": "///o/46", "trs_dist": 9.377, "rot_dist": 26.812, "six_params": [ -8.469, 0.167, 4.021, -11.171, -20.011, 14.011 ], "C_alpha": [ -9.012, -0.627, 2.455 ] }, { "index": 173, "ntaa": "U-ser", "nt": "///a/734", "aa": "///o/52", "trs_dist": 9.952, "rot_dist": -179.030, "six_params": [ -4.006, -8.713, -2.663, -43.436, 33.161, -178.908 ], "C_alpha": [ -8.898, 4.028, 1.924 ] }, { "index": 174, "ntaa": "A-thr", "nt": "///a/743", "aa": "///o/22", "trs_dist": 7.054, "rot_dist": 69.401, "six_params": [ -6.258, -2.094, -2.493, -7.034, 69.036, 1.035 ], "C_alpha": [ -6.507, -2.174, 1.622 ] }, { "index": 175, "ntaa": "C-thr", "nt": "///a/744", "aa": "///o/22", "trs_dist": -8.246, "rot_dist": -76.864, "six_params": [ -6.009, 0.261, -5.640, 0.205, 64.087, -44.921 ], "C_alpha": [ -7.363, 3.341, -1.586 ] }, { "index": 176, "ntaa": "C-gly", "nt": "///a/744", "aa": "///o/23", "trs_dist": 6.369, "rot_dist": 50.312, "six_params": [ -4.543, 2.525, 3.681, -39.847, -22.271, 21.745 ], "C_alpha": [ -5.664, 2.463, 1.681 ] }, { "index": 177, "ntaa": "U-gly", "nt": "///a/745", "aa": "///o/23", "trs_dist": -7.570, "rot_dist": -54.282, "six_params": [ -4.445, 6.079, -0.775, -44.358, -29.843, -9.762 ], "C_alpha": [ -3.373, 5.451, -4.081 ] }, { "index": 178, "ntaa": "U-gln", "nt": "///a/745", "aa": "///o/28", "trs_dist": -11.627, "rot_dist": -63.945, "six_params": [ -11.614, 0.509, -0.200, 9.914, -56.974, -28.554 ], "C_alpha": [ -9.625, 3.242, -5.661 ] }, { "index": 179, "ntaa": "C-tyr", "nt": "///a/748", "aa": "///o/69", "trs_dist": 11.515, "rot_dist": 117.127, "six_params": [ 5.890, 9.784, -1.471, -10.356, -80.642, 93.144 ], "C_alpha": [ -3.170, 10.903, 1.873 ] }, { "index": 180, "ntaa": "A-cys", "nt": "///a/771", "aa": "///k/121", "trs_dist": 6.648, "rot_dist": 84.758, "six_params": [ -4.655, 2.505, 4.031, -5.399, -34.228, 78.605 ], "C_alpha": [ -6.024, -1.492, 2.359 ] }, { "index": 181, "ntaa": "G-arg", "nt": "///a/772", "aa": "///k/122", "trs_dist": 8.995, "rot_dist": -93.612, "six_params": [ -8.400, -2.970, -1.236, -52.362, 18.842, -78.580 ], "C_alpha": [ -8.311, 3.049, 1.543 ] }, { "index": 182, "ntaa": "A-asp", "nt": "///a/819", "aa": "///h/9", "trs_dist": -9.252, "rot_dist": 94.586, "six_params": [ -5.030, 6.744, 3.849, -55.792, -38.054, 70.650 ], "C_alpha": [ -8.689, 2.846, -1.476 ] }, { "index": 183, "ntaa": "A-thr", "nt": "///a/819", "aa": "///h/12", "trs_dist": 8.198, "rot_dist": 61.965, "six_params": [ -8.065, 1.442, 0.299, -42.226, 14.558, 44.104 ], "C_alpha": [ -8.019, -1.480, 0.758 ] }, { "index": 184, "ntaa": "C-asn", "nt": "///a/820", "aa": "///h/16", "trs_dist": 8.933, "rot_dist": 64.205, "six_params": [ -7.853, 3.077, 2.944, -61.740, -3.438, 18.208 ], "C_alpha": [ -8.458, 2.793, 0.720 ] }, { "index": 185, "ntaa": "A-pro", "nt": "///a/822", "aa": "///b/25", "trs_dist": 8.056, "rot_dist": -130.574, "six_params": [ -4.641, -5.184, 4.060, -15.957, 1.829, -130.051 ], "C_alpha": [ -6.109, 2.215, 4.816 ] }, { "index": 186, "ntaa": "G-his", "nt": "///a/849", "aa": "///u/56", "trs_dist": -11.307, "rot_dist": 38.809, "six_params": [ -10.185, 4.700, 1.425, -5.841, -15.530, 35.208 ], "C_alpha": [ -11.218, 1.414, -0.199 ] }, { "index": 187, "ntaa": "G-asn", "nt": "///a/868", "aa": "///h/16", "trs_dist": 8.813, "rot_dist": 178.622, "six_params": [ -3.375, 8.090, -0.909, 28.836, 71.962, 178.233 ], "C_alpha": [ -7.838, -2.533, 3.141 ] }, { "index": 188, "ntaa": "U-thr", "nt": "///a/869", "aa": "///h/12", "trs_dist": 7.830, "rot_dist": 153.468, "six_params": [ -1.835, 7.430, 1.658, 9.986, 53.368, 150.111 ], "C_alpha": [ -7.167, 1.138, 2.917 ] }, { "index": 189, "ntaa": "U-asn", "nt": "///a/869", "aa": "///h/16", "trs_dist": -9.432, "rot_dist": 142.773, "six_params": [ 2.225, 7.962, -4.540, 33.527, 65.218, 133.104 ], "C_alpha": [ -8.265, 3.695, -2.645 ] }, { "index": 190, "ntaa": "G-ser", "nt": "///a/871", "aa": "///h/2", "trs_dist": -9.058, "rot_dist": -137.047, "six_params": [ -1.173, -6.140, -6.555, -86.636, 1.242, -119.568 ], "C_alpha": [ -8.348, -3.462, -0.546 ] }, { "index": 191, "ntaa": "C-gln", "nt": "///a/874", "aa": "///l/6", "trs_dist": 11.773, "rot_dist": -115.705, "six_params": [ -7.602, 7.475, 4.993, -45.708, 38.116, -104.397 ], "C_alpha": [ 3.606, 10.504, 3.895 ] }, { "index": 192, "ntaa": "G-gln", "nt": "///a/875", "aa": "///l/6", "trs_dist": 10.861, "rot_dist": -137.853, "six_params": [ -4.744, 9.586, 1.888, -13.480, 49.135, -133.057 ], "C_alpha": [ 7.536, 7.384, 2.575 ] }, { "index": 193, "ntaa": "C-ala", "nt": "///a/876", "aa": "///l/2", "trs_dist": -4.109, "rot_dist": 114.423, "six_params": [ 1.144, -3.204, 2.303, 77.391, 19.839, 90.117 ], "C_alpha": [ 3.673, -1.787, -0.406 ] }, { "index": 194, "ntaa": "C-gln", "nt": "///a/876", "aa": "///l/6", "trs_dist": -9.190, "rot_dist": -177.900, "six_params": [ -1.450, 8.711, -2.546, -10.925, 27.445, -177.828 ], "C_alpha": [ 8.405, 2.268, -2.947 ] }, { "index": 195, "ntaa": "C-lys", "nt": "///a/876", "aa": "///l/10", "trs_dist": 12.207, "rot_dist": 164.336, "six_params": [ 6.519, -8.602, -5.703, -26.653, -74.396, 159.653 ], "C_alpha": [ 10.376, 6.255, 1.350 ] }, { "index": 196, "ntaa": "U-arg", "nt": "///a/878", "aa": "///l/12", "trs_dist": 9.236, "rot_dist": -126.668, "six_params": [ 1.864, 7.390, 5.218, 10.027, 1.158, -126.444 ], "C_alpha": [ 7.019, 1.390, 5.821 ] }, { "index": 197, "ntaa": "U-thr", "nt": "///a/915", "aa": "///e/25", "trs_dist": 6.488, "rot_dist": -78.725, "six_params": [ -6.398, -1.076, -0.042, -69.277, 24.042, -30.902 ], "C_alpha": [ -6.116, 1.135, 1.829 ] }, { "index": 198, "ntaa": "A-arg", "nt": "///a/929", "aa": "///g/3", "trs_dist": -5.993, "rot_dist": 89.581, "six_params": [ 4.364, -1.872, -3.656, -65.184, 25.542, 59.911 ], "C_alpha": [ 5.021, -1.488, -2.895 ] }, { "index": 199, "ntaa": "G-gln", "nt": "///a/936", "aa": "///i/126", "trs_dist": -9.862, "rot_dist": 59.704, "six_params": [ -9.765, 1.282, 0.505, 11.496, -53.045, 25.878 ], "C_alpha": [ -9.081, -0.601, -3.781 ] }, { "index": 200, "ntaa": "U-gln", "nt": "///a/937", "aa": "///i/126", "trs_dist": -11.771, "rot_dist": -51.399, "six_params": [ -9.659, 6.227, -2.548, -2.742, -50.742, -7.990 ], "C_alpha": [ -7.153, 6.626, -6.585 ] }, { "index": 201, "ntaa": "C-asn", "nt": "///a/942", "aa": "///m/105", "trs_dist": 9.548, "rot_dist": -137.814, "six_params": [ -2.575, 7.539, 5.262, 19.690, -72.797, -125.885 ], "C_alpha": [ 3.457, 8.041, 3.870 ] }, { "index": 202, "ntaa": "A-asn", "nt": "///a/943", "aa": "///m/105", "trs_dist": 9.262, "rot_dist": -179.430, "six_params": [ -3.511, 6.860, 5.138, 17.369, -68.994, -179.299 ], "C_alpha": [ 6.172, 6.141, 3.200 ] }, { "index": 203, "ntaa": "U-arg", "nt": "///a/944", "aa": "///m/101", "trs_dist": 11.484, "rot_dist": 65.438, "six_params": [ 8.508, 4.829, 6.015, -54.323, -36.319, 3.673 ], "C_alpha": [ 6.374, 7.831, 5.448 ] }, { "index": 204, "ntaa": "U-asn", "nt": "///a/944", "aa": "///m/105", "trs_dist": 7.868, "rot_dist": 134.626, "six_params": [ 3.248, -6.001, 3.917, 0.950, 65.915, 125.266 ], "C_alpha": [ 7.574, 1.537, 1.500 ] }, { "index": 205, "ntaa": "G-arg", "nt": "///a/945", "aa": "///m/101", "trs_dist": 13.050, "rot_dist": -76.341, "six_params": [ 10.285, 6.910, 4.096, -69.225, -30.331, -11.669 ], "C_alpha": [ 10.289, 7.783, 1.885 ] }, { "index": 206, "ntaa": "U-lys", "nt": "///a/946", "aa": "///m/103", "trs_dist": 9.700, "rot_dist": -63.203, "six_params": [ 6.752, 5.486, 4.289, -32.790, 7.374, -54.327 ], "C_alpha": [ 9.114, 2.521, 2.131 ] }, { "index": 207, "ntaa": "U-thr", "nt": "///a/946", "aa": "///m/104", "trs_dist": -8.095, "rot_dist": -34.916, "six_params": [ 7.738, 0.218, -2.368, 16.947, -29.256, -8.847 ], "C_alpha": [ 8.068, -0.226, -0.284 ] }, { "index": 208, "ntaa": "G-lys", "nt": "///a/947", "aa": "///m/103", "trs_dist": -7.570, "rot_dist": -93.230, "six_params": [ 6.454, 3.882, -0.762, -8.929, 16.496, -91.753 ], "C_alpha": [ 7.059, -1.863, -1.980 ] }, { "index": 209, "ntaa": "G-lys", "nt": "///a/948", "aa": "///m/103", "trs_dist": -6.010, "rot_dist": -145.385, "six_params": [ 4.619, -0.900, -3.739, 6.748, 9.614, -145.197 ], "C_alpha": [ 0.642, -4.286, -4.162 ] }, { "index": 210, "ntaa": "A-gly", "nt": "///a/952", "aa": "///s/54", "trs_dist": -3.835, "rot_dist": -130.481, "six_params": [ 2.843, -2.555, 0.307, 9.403, 59.005, -122.238 ], "C_alpha": [ -0.951, -3.469, -1.314 ] }, { "index": 211, "ntaa": "A-arg", "nt": "///a/952", "aa": "///s/55", "trs_dist": -4.924, "rot_dist": -98.548, "six_params": [ -1.590, -3.973, -2.436, 26.157, -15.079, -94.974 ], "C_alpha": [ -3.218, -1.349, -3.460 ] }, { "index": 212, "ntaa": "A-thr", "nt": "///a/952", "aa": "///s/77", "trs_dist": -5.821, "rot_dist": -117.600, "six_params": [ 4.900, 2.998, 0.943, -76.548, -20.652, -95.444 ], "C_alpha": [ 5.643, -1.413, -0.309 ] }, { "index": 213, "ntaa": "A-thr", "nt": "///a/953", "aa": "///s/77", "trs_dist": -6.000, "rot_dist": -148.204, "six_params": [ 5.462, 2.481, -0.120, -75.681, -34.262, -137.067 ], "C_alpha": [ 4.257, -4.234, -0.096 ] }, { "index": 214, "ntaa": "A-arg", "nt": "///a/953", "aa": "///s/78", "trs_dist": -6.199, "rot_dist": -174.239, "six_params": [ 0.749, 4.229, -4.471, 84.583, -29.162, -171.888 ], "C_alpha": [ 6.119, -0.930, -0.183 ] }, { "index": 215, "ntaa": "U-arg", "nt": "///a/954", "aa": "///s/78", "trs_dist": 7.364, "rot_dist": -73.191, "six_params": [ 6.119, 4.097, 0.113, -19.022, -55.825, -45.456 ], "C_alpha": [ 6.737, 1.839, 2.293 ] }, { "index": 216, "ntaa": "G-his", "nt": "///a/957", "aa": "///j/56", "trs_dist": -10.513, "rot_dist": 76.349, "six_params": [ -8.310, 6.434, -0.226, 6.278, -41.876, 65.075 ], "C_alpha": [ -10.019, 1.353, -2.829 ] }, { "index": 217, "ntaa": "G-val", "nt": "///a/957", "aa": "///j/57", "trs_dist": -9.350, "rot_dist": -18.222, "six_params": [ -8.481, -3.311, -2.131, -1.393, 5.150, -17.430 ], "C_alpha": [ -8.962, -1.998, -1.689 ] }, { "index": 218, "ntaa": "C-val", "nt": "///a/966", "aa": "///j/57", "trs_dist": 9.842, "rot_dist": -174.620, "six_params": [ -3.951, -8.199, 3.745, -9.879, -8.645, -174.585 ], "C_alpha": [ -8.045, 3.868, 4.108 ] }, { "index": 219, "ntaa": "G-his", "nt": "///a/967", "aa": "///j/56", "trs_dist": -9.653, "rot_dist": 94.242, "six_params": [ -2.458, 8.262, -4.345, 27.436, -18.777, 89.508 ], "C_alpha": [ -7.740, 5.108, -2.611 ] }, { "index": 220, "ntaa": "A-arg", "nt": "///a/968", "aa": "///n/69", "trs_dist": 9.560, "rot_dist": 156.225, "six_params": [ -7.876, 1.437, 5.224, -61.178, 39.594, 150.329 ], "C_alpha": [ -5.889, -4.506, 6.016 ] }, { "index": 221, "ntaa": "A-his", "nt": "///a/968", "aa": "///n/71", "trs_dist": 7.516, "rot_dist": -150.408, "six_params": [ -1.778, -6.717, 2.867, -45.237, -33.628, -146.317 ], "C_alpha": [ -5.828, 1.261, 4.569 ] }, { "index": 222, "ntaa": "A-thr", "nt": "///a/969", "aa": "///j/50", "trs_dist": -6.339, "rot_dist": -115.346, "six_params": [ 0.567, 4.060, -4.835, 14.544, -82.613, -88.069 ], "C_alpha": [ 5.645, 0.877, -2.751 ] }, { "index": 223, "ntaa": "A-arg", "nt": "///a/969", "aa": "///j/62", "trs_dist": -9.054, "rot_dist": 165.685, "six_params": [ -4.218, -7.627, -2.453, 82.465, -27.766, 160.216 ], "C_alpha": [ 3.224, -3.537, -7.671 ] }, { "index": 224, "ntaa": "A-tyr", "nt": "///a/969", "aa": "///n/74", "trs_dist": -12.202, "rot_dist": 138.728, "six_params": [ 8.833, 2.860, -7.917, -7.289, -66.089, 130.154 ], "C_alpha": [ 2.664, 11.724, -1.974 ] }, { "index": 225, "ntaa": "C-ser", "nt": "///a/973", "aa": "///n/58", "trs_dist": 3.720, "rot_dist": 151.910, "six_params": [ -2.159, -2.888, -0.916, -71.416, 4.223, 145.193 ], "C_alpha": [ 2.069, -2.910, 1.015 ] }, { "index": 226, "ntaa": "C-arg", "nt": "///a/973", "aa": "///n/59", "trs_dist": 4.084, "rot_dist": -171.032, "six_params": [ -0.131, -0.823, 3.999, -12.694, 50.184, -170.029 ], "C_alpha": [ -0.246, -1.623, 3.739 ] }, { "index": 227, "ntaa": "C-ser", "nt": "///a/974", "aa": "///n/58", "trs_dist": -7.181, "rot_dist": 99.722, "six_params": [ -3.887, 5.532, -2.420, -75.609, 36.434, 59.783 ], "C_alpha": [ -5.948, 0.413, -4.008 ] }, { "index": 228, "ntaa": "C-arg", "nt": "///a/974", "aa": "///n/59", "trs_dist": -7.571, "rot_dist": 139.075, "six_params": [ 0.308, 7.542, 0.584, -40.050, -48.292, 131.660 ], "C_alpha": [ -6.428, 3.528, -1.886 ] }, { "index": 229, "ntaa": "U-gly", "nt": "///a/980", "aa": "///s/54", "trs_dist": -9.165, "rot_dist": 91.435, "six_params": [ -1.804, 8.744, -2.066, -40.064, 30.298, 79.094 ], "C_alpha": [ -6.887, 4.158, -4.386 ] }, { "index": 230, "ntaa": "A-ser", "nt": "///a/988", "aa": "///n/5", "trs_dist": -4.631, "rot_dist": -167.299, "six_params": [ -0.609, -2.808, -3.633, -11.766, -1.388, -167.231 ], "C_alpha": [ -3.211, 0.204, -3.337 ] }, { "index": 231, "ntaa": "A-asn", "nt": "///a/988", "aa": "///n/8", "trs_dist": -8.353, "rot_dist": -172.284, "six_params": [ -2.594, -7.923, -0.517, 34.011, 36.663, -171.484 ], "C_alpha": [ -7.749, 2.432, -1.940 ] }, { "index": 232, "ntaa": "C-glu", "nt": "///a/989", "aa": "///n/4", "trs_dist": -8.709, "rot_dist": 168.993, "six_params": [ -0.008, 8.678, 0.735, -78.527, -20.889, 165.481 ], "C_alpha": [ -7.075, 1.288, -4.906 ] }, { "index": 233, "ntaa": "A-trp", "nt": "///a/1008", "aa": "///s/34", "trs_dist": -8.182, "rot_dist": -74.728, "six_params": [ -8.051, 1.293, -0.681, -33.824, -46.406, -50.024 ], "C_alpha": [ -6.155, 3.517, -4.092 ] }, { "index": 234, "ntaa": "U-lys", "nt": "///a/1043", "aa": "///n/3", "trs_dist": 8.322, "rot_dist": 171.431, "six_params": [ 7.444, -1.886, 3.208, 43.499, -21.952, 170.592 ], "C_alpha": [ 3.738, 6.497, 3.613 ] }, { "index": 235, "ntaa": "C-glu", "nt": "///a/1048", "aa": "///c/161", "trs_dist": -11.029, "rot_dist": 146.572, "six_params": [ 2.407, 10.476, -2.466, -42.949, 3.556, 143.977 ], "C_alpha": [ -7.681, 4.891, -6.164 ] }, { "index": 236, "ntaa": "A-arg", "nt": "///a/1049", "aa": "///c/156", "trs_dist": 9.108, "rot_dist": -174.082, "six_params": [ -1.059, -8.930, -1.445, -73.962, -34.930, -172.169 ], "C_alpha": [ -8.187, 0.897, 3.889 ] }, { "index": 237, "ntaa": "A-gly", "nt": "///a/1049", "aa": "///c/194", "trs_dist": 5.104, "rot_dist": 138.164, "six_params": [ -2.568, 3.441, 2.761, -2.426, -85.469, 121.816 ], "C_alpha": [ -4.852, -1.588, 0.207 ] }, { "index": 238, "ntaa": "U-val", "nt": "///a/1050", "aa": "///c/195", "trs_dist": 7.636, "rot_dist": -73.770, "six_params": [ -7.411, -1.812, 0.315, -59.639, 2.146, -45.536 ], "C_alpha": [ -7.347, 1.568, 1.306 ] }, { "index": 239, "ntaa": "G-glu", "nt": "///a/1051", "aa": "///c/188", "trs_dist": 11.612, "rot_dist": 141.831, "six_params": [ 1.624, 11.256, -2.346, 29.166, 25.661, 139.430 ], "C_alpha": [ -10.326, 5.290, 0.236 ] }, { "index": 240, "ntaa": "C-pro", "nt": "///a/1053", "aa": "///j/55", "trs_dist": -8.540, "rot_dist": -87.074, "six_params": [ -7.971, -1.157, -2.838, 75.035, 33.769, -31.433 ], "C_alpha": [ -8.219, 2.336, -0.689 ] }, { "index": 241, "ntaa": "U-gln", "nt": "///a/1054", "aa": "///c/3", "trs_dist": 10.513, "rot_dist": 107.332, "six_params": [ 9.826, 2.922, 2.331, 12.454, -24.053, 104.902 ], "C_alpha": [ 3.521, 8.747, 4.633 ] }, { "index": 242, "ntaa": "U-ser", "nt": "///a/1054", "aa": "///j/54", "trs_dist": -9.475, "rot_dist": 73.975, "six_params": [ -0.652, 8.307, -4.510, 12.468, 55.040, 49.949 ], "C_alpha": [ -5.892, 6.864, -2.798 ] }, { "index": 243, "ntaa": "G-gln", "nt": "///a/1055", "aa": "///c/3", "trs_dist": 10.971, "rot_dist": 86.872, "six_params": [ 10.731, 1.619, -1.606, 3.182, -34.169, 81.077 ], "C_alpha": [ 7.088, 8.191, 1.669 ] }, { "index": 244, "ntaa": "U-gln", "nt": "///a/1056", "aa": "///c/3", "trs_dist": -8.394, "rot_dist": 64.386, "six_params": [ 7.540, -0.865, -3.586, -40.654, -14.034, 49.108 ], "C_alpha": [ 7.954, 1.565, -2.128 ] }, { "index": 245, "ntaa": "G-thr", "nt": "///a/1066", "aa": "///b/106", "trs_dist": 8.398, "rot_dist": 77.404, "six_params": [ -7.731, -0.311, 3.264, 76.678, -10.531, 1.055 ], "C_alpha": [ -7.943, -2.113, 1.692 ] }, { "index": 246, "ntaa": "U-asn", "nt": "///a/1067", "aa": "///b/103", "trs_dist": 9.429, "rot_dist": 149.448, "six_params": [ -0.577, 9.392, 0.615, 45.039, 66.829, 139.584 ], "C_alpha": [ -7.577, 3.721, 4.167 ] }, { "index": 247, "ntaa": "U-thr", "nt": "///a/1067", "aa": "///b/106", "trs_dist": -9.504, "rot_dist": -64.755, "six_params": [ -9.391, 1.147, 0.909, 49.214, -34.687, -25.039 ], "C_alpha": [ -8.806, 3.247, -1.460 ] }, { "index": 248, "ntaa": "U-asn", "nt": "///a/1072", "aa": "///e/136", "trs_dist": -9.079, "rot_dist": 154.753, "six_params": [ 1.917, 8.506, -2.530, 24.813, 47.656, 151.639 ], "C_alpha": [ -8.384, 3.264, -1.248 ] }, { "index": 249, "ntaa": "G-lys", "nt": "///a/1075", "aa": "///e/53", "trs_dist": 8.841, "rot_dist": -108.707, "six_params": [ 0.771, -8.622, 1.793, 0.347, -22.788, -107.045 ], "C_alpha": [ -6.695, -5.440, 1.895 ] }, { "index": 250, "ntaa": "A-gly", "nt": "///a/1095", "aa": "///b/98", "trs_dist": -5.454, "rot_dist": 123.738, "six_params": [ -1.535, 3.312, -4.052, 5.132, -87.415, 98.455 ], "C_alpha": [ -1.580, 3.524, -3.849 ] }, { "index": 251, "ntaa": "A-gly", "nt": "///a/1095", "aa": "///b/99", "trs_dist": -3.544, "rot_dist": 45.178, "six_params": [ 0.944, 0.130, -3.413, -1.426, 37.636, 25.418 ], "C_alpha": [ -0.219, 0.029, -3.519 ] }, { "index": 252, "ntaa": "A-thr", "nt": "///a/1095", "aa": "///b/102", "trs_dist": -5.981, "rot_dist": -95.446, "six_params": [ 5.326, -2.657, 0.594, -17.001, 82.427, -49.981 ], "C_alpha": [ 2.912, -4.467, -2.702 ] }, { "index": 253, "ntaa": "A-ile", "nt": "///a/1095", "aa": "///b/171", "trs_dist": -8.465, "rot_dist": -34.246, "six_params": [ 3.370, 7.303, -2.639, -19.370, -26.077, -10.991 ], "C_alpha": [ 4.644, 6.405, -3.000 ] }, { "index": 254, "ntaa": "A-glu", "nt": "///a/1095", "aa": "///b/175", "trs_dist": -7.143, "rot_dist": -35.621, "six_params": [ 5.845, 0.470, -4.078, 3.458, -35.355, -2.666 ], "C_alpha": [ 6.822, 0.404, -2.103 ] }, { "index": 255, "ntaa": "A-gly", "nt": "///a/1096", "aa": "///b/98", "trs_dist": -9.628, "rot_dist": 68.489, "six_params": [ -5.849, 5.525, -5.289, 59.187, 32.057, 13.467 ], "C_alpha": [ -7.406, 6.151, -0.169 ] }, { "index": 256, "ntaa": "A-asn", "nt": "///a/1096", "aa": "///b/103", "trs_dist": 8.468, "rot_dist": 58.006, "six_params": [ -8.245, 0.277, 1.911, -34.924, -20.171, 42.595 ], "C_alpha": [ -8.075, -2.484, 0.290 ] }, { "index": 257, "ntaa": "C-asn", "nt": "///a/1097", "aa": "///b/103", "trs_dist": -10.449, "rot_dist": -54.851, "six_params": [ -8.369, 5.847, -2.228, -49.041, -24.457, -2.443 ], "C_alpha": [ -7.360, 4.185, -6.099 ] }, { "index": 258, "ntaa": "C-thr", "nt": "///a/1097", "aa": "///b/106", "trs_dist": -8.707, "rot_dist": 177.628, "six_params": [ 0.657, 8.051, -3.248, 19.156, -85.728, 176.707 ], "C_alpha": [ -8.323, 2.444, -0.673 ] }, { "index": 259, "ntaa": "A-his", "nt": "///a/1105", "aa": "///c/176", "trs_dist": 5.555, "rot_dist": -156.971, "six_params": [ 2.852, 2.550, 4.028, -70.022, 30.737, -150.556 ], "C_alpha": [ 4.907, -2.384, 0.999 ] }, { "index": 260, "ntaa": "A-thr", "nt": "///a/1105", "aa": "///c/177", "trs_dist": 3.860, "rot_dist": -144.785, "six_params": [ 1.305, 0.886, 3.523, 11.904, 53.569, -140.145 ], "C_alpha": [ 1.455, -2.408, 2.616 ] }, { "index": 261, "ntaa": "C-his", "nt": "///a/1106", "aa": "///c/176", "trs_dist": -4.207, "rot_dist": 176.674, "six_params": [ -3.815, -1.328, -1.173, 35.183, -56.081, 176.029 ], "C_alpha": [ 0.549, -2.747, -3.145 ] }, { "index": 262, "ntaa": "C-thr", "nt": "///a/1106", "aa": "///c/177", "trs_dist": -3.342, "rot_dist": -177.545, "six_params": [ 0.976, -3.057, -0.934, 50.017, 46.482, -177.033 ], "C_alpha": [ -2.301, -0.322, -2.416 ] }, { "index": 263, "ntaa": "C-leu", "nt": "///a/1106", "aa": "///c/178", "trs_dist": 3.561, "rot_dist": -123.771, "six_params": [ -2.319, -2.701, -0.105, 12.836, 86.146, -98.892 ], "C_alpha": [ -3.321, -0.372, 1.228 ] }, { "index": 264, "ntaa": "C-arg", "nt": "///a/1106", "aa": "///c/179", "trs_dist": 6.629, "rot_dist": -100.499, "six_params": [ -5.535, -3.647, 0.033, -34.167, -14.274, -95.193 ], "C_alpha": [ -6.405, 1.693, 0.415 ] }, { "index": 265, "ntaa": "C-leu", "nt": "///a/1107", "aa": "///c/178", "trs_dist": -10.806, "rot_dist": -119.910, "six_params": [ -9.545, 4.370, -2.561, -59.882, -23.647, -107.455 ], "C_alpha": [ -3.467, 8.143, -6.200 ] }, { "index": 266, "ntaa": "A-pro", "nt": "///a/1117", "aa": "///j/41", "trs_dist": -8.816, "rot_dist": -62.744, "six_params": [ -7.358, -2.893, -3.901, 45.085, 26.481, -35.980 ], "C_alpha": [ -8.275, 1.068, -2.972 ] }, { "index": 267, "ntaa": "U-ile", "nt": "///a/1119", "aa": "///j/40", "trs_dist": -7.564, "rot_dist": 77.475, "six_params": [ 4.480, 5.011, -3.469, -36.431, 68.373, 0.569 ], "C_alpha": [ 1.328, 3.354, -6.638 ] }, { "index": 268, "ntaa": "U-arg", "nt": "///a/1120", "aa": "///j/9", "trs_dist": 8.224, "rot_dist": -71.057, "six_params": [ 8.016, -0.640, -1.724, -68.726, -18.013, -1.233 ], "C_alpha": [ 8.120, -1.228, 0.131 ] }, { "index": 269, "ntaa": "U-val", "nt": "///a/1120", "aa": "///j/73", "trs_dist": 8.791, "rot_dist": 156.273, "six_params": [ 1.939, -7.089, 4.824, 2.260, 65.951, 151.623 ], "C_alpha": [ 7.969, 2.329, 2.855 ] }, { "index": 270, "ntaa": "A-arg", "nt": "///a/1140", "aa": "///i/18", "trs_dist": 9.757, "rot_dist": -155.374, "six_params": [ 4.546, -8.574, 1.011, -28.935, -43.199, -152.550 ], "C_alpha": [ -6.787, -5.206, 4.657 ] }, { "index": 271, "ntaa": "C-arg", "nt": "///a/1141", "aa": "///i/18", "trs_dist": 12.240, "rot_dist": 160.082, "six_params": [ 2.432, 11.939, -1.167, 63.157, 45.363, 154.327 ], "C_alpha": [ -10.064, 5.450, 4.281 ] }, { "index": 272, "ntaa": "U-arg", "nt": "///a/1142", "aa": "///i/18", "trs_dist": -13.267, "rot_dist": 128.113, "six_params": [ 7.324, 9.017, -6.408, 50.247, 18.149, 121.351 ], "C_alpha": [ -6.467, 11.158, -3.028 ] }, { "index": 273, "ntaa": "U-pro", "nt": "///a/1144", "aa": "///j/41", "trs_dist": 7.763, "rot_dist": -164.514, "six_params": [ -3.244, -6.690, 2.232, 28.086, 35.878, -163.195 ], "C_alpha": [ -7.494, 1.609, 1.464 ] }, { "index": 274, "ntaa": "A-pro", "nt": "///a/1145", "aa": "///j/41", "trs_dist": -8.772, "rot_dist": -173.573, "six_params": [ -4.885, -6.837, -2.520, 57.986, 7.777, -172.632 ], "C_alpha": [ -5.186, 4.865, -5.203 ] }, { "index": 275, "ntaa": "G-arg", "nt": "///a/1172", "aa": "///i/99", "trs_dist": 9.209, "rot_dist": -68.852, "six_params": [ 6.182, 6.706, 1.269, -3.044, -58.694, -37.595 ], "C_alpha": [ 6.734, 4.862, 3.959 ] }, { "index": 276, "ntaa": "G-ser", "nt": "///a/1181", "aa": "///n/100", "trs_dist": -9.141, "rot_dist": 164.497, "six_params": [ 3.331, 8.491, -0.603, -4.924, 9.002, 164.435 ], "C_alpha": [ -7.929, 4.370, -1.226 ] }, { "index": 277, "ntaa": "G-lys", "nt": "///a/1187", "aa": "///e/27", "trs_dist": 12.120, "rot_dist": 102.454, "six_params": [ -4.476, 8.737, 7.109, -29.124, -80.034, 63.460 ], "C_alpha": [ -11.263, 4.460, 0.348 ] }, { "index": 278, "ntaa": "A-glu", "nt": "///a/1190", "aa": "///c/161", "trs_dist": 8.109, "rot_dist": -142.594, "six_params": [ -0.918, 7.994, -1.005, 34.808, 6.509, -140.660 ], "C_alpha": [ 7.133, 3.516, 1.448 ] }, { "index": 279, "ntaa": "G-ser", "nt": "///a/1192", "aa": "///j/54", "trs_dist": -8.338, "rot_dist": 115.341, "six_params": [ -7.272, 3.635, 1.853, -53.477, -11.533, 105.958 ], "C_alpha": [ -7.533, -3.497, -0.699 ] }, { "index": 280, "ntaa": "G-pro", "nt": "///a/1192", "aa": "///j/55", "trs_dist": 8.235, "rot_dist": -162.673, "six_params": [ -1.361, -6.734, 4.542, 23.609, 77.427, -157.158 ], "C_alpha": [ -7.174, -2.762, 3.041 ] }, { "index": 281, "ntaa": "U-pro", "nt": "///a/1193", "aa": "///j/55", "trs_dist": -8.297, "rot_dist": -169.288, "six_params": [ -1.618, -8.133, -0.264, 56.301, 62.416, -165.562 ], "C_alpha": [ -7.576, 1.654, -3.036 ] }, { "index": 282, "ntaa": "U-pro", "nt": "///a/1196", "aa": "///j/55", "trs_dist": -7.053, "rot_dist": -163.058, "six_params": [ -1.238, -0.946, -6.878, 55.816, 52.852, -158.321 ], "C_alpha": [ 1.285, 4.510, -5.289 ] }, { "index": 283, "ntaa": "U-asn", "nt": "///a/1196", "aa": "///n/82", "trs_dist": -5.776, "rot_dist": 49.775, "six_params": [ -4.052, 1.913, -3.645, -5.349, -12.841, 47.911 ], "C_alpha": [ -4.020, 0.116, -4.143 ] }, { "index": 284, "ntaa": "G-his", "nt": "///a/1214", "aa": "///s/52", "trs_dist": -11.113, "rot_dist": 11.278, "six_params": [ -8.264, 6.867, -2.838, 3.504, 7.098, 8.039 ], "C_alpha": [ -8.876, 6.331, -2.111 ] }, { "index": 285, "ntaa": "G-gly", "nt": "///a/1214", "aa": "///s/54", "trs_dist": -6.826, "rot_dist": 88.387, "six_params": [ -4.198, 5.309, -0.890, -27.091, 51.115, 69.994 ], "C_alpha": [ -6.599, 1.695, -0.171 ] }, { "index": 286, "ntaa": "C-lys", "nt": "///a/1220", "aa": "///m/103", "trs_dist": 7.175, "rot_dist": -35.679, "six_params": [ -1.388, 5.853, 3.911, -10.655, 8.013, -33.170 ], "C_alpha": [ 0.682, 6.256, 3.443 ] }, { "index": 287, "ntaa": "C-lys", "nt": "///a/1222", "aa": "///m/103", "trs_dist": -7.715, "rot_dist": -82.500, "six_params": [ 3.296, 6.967, 0.343, -28.461, -10.746, -77.637 ], "C_alpha": [ 6.899, 3.271, -1.070 ] }, { "index": 288, "ntaa": "A-thr", "nt": "///a/1223", "aa": "///m/104", "trs_dist": 7.663, "rot_dist": -156.210, "six_params": [ -0.884, 6.380, 4.151, -33.228, 33.451, -154.008 ], "C_alpha": [ 7.126, 1.596, 2.260 ] }, { "index": 289, "ntaa": "C-thr", "nt": "///a/1224", "aa": "///m/104", "trs_dist": -7.963, "rot_dist": 173.918, "six_params": [ -0.082, -7.902, 0.987, 29.053, -27.111, 173.533 ], "C_alpha": [ 7.862, -0.497, -1.054 ] }, { "index": 290, "ntaa": "U-val", "nt": "///a/1234", "aa": "///g/30", "trs_dist": -2.316, "rot_dist": 177.457, "six_params": [ -2.244, -0.327, -0.469, -61.728, -5.272, 177.034 ], "C_alpha": [ 0.483, -2.241, -0.331 ] }, { "index": 291, "ntaa": "U-glu", "nt": "///a/1234", "aa": "///g/32", "trs_dist": 5.438, "rot_dist": 107.040, "six_params": [ 1.119, -2.273, 4.812, -73.745, -33.019, 77.349 ], "C_alpha": [ -0.995, 0.632, 5.305 ] }, { "index": 292, "ntaa": "U-val", "nt": "///a/1234", "aa": "///g/38", "trs_dist": -8.374, "rot_dist": 120.726, "six_params": [ -3.487, 5.034, -5.712, 87.220, 7.968, 93.523 ], "C_alpha": [ -7.993, 2.435, -0.431 ] }, { "index": 293, "ntaa": "U-ala", "nt": "///a/1234", "aa": "///g/39", "trs_dist": -5.412, "rot_dist": 125.200, "six_params": [ -1.378, 4.215, -3.103, -2.358, 82.491, 104.501 ], "C_alpha": [ -5.206, 0.086, -1.500 ] }, { "index": 294, "ntaa": "U-val", "nt": "///a/1234", "aa": "///g/105", "trs_dist": -7.597, "rot_dist": -155.707, "six_params": [ 2.648, 7.063, -0.903, -48.085, -1.127, -153.357 ], "C_alpha": [ 6.538, -1.191, -3.665 ] }, { "index": 295, "ntaa": "U-arg", "nt": "///a/1234", "aa": "///g/109", "trs_dist": -9.493, "rot_dist": -160.923, "six_params": [ -3.571, 8.281, 2.966, -86.134, 3.182, -153.767 ], "C_alpha": [ 7.096, 5.322, -3.397 ] }, { "index": 296, "ntaa": "A-val", "nt": "///a/1242", "aa": "///i/72", "trs_dist": 8.510, "rot_dist": -167.440, "six_params": [ -0.995, -8.096, -2.425, -47.494, -39.744, -165.342 ], "C_alpha": [ -8.462, -0.378, 0.778 ] }, { "index": 297, "ntaa": "C-val", "nt": "///a/1243", "aa": "///i/72", "trs_dist": -7.896, "rot_dist": 171.919, "six_params": [ 4.050, 5.414, -4.078, 56.304, 44.264, 170.031 ], "C_alpha": [ -6.758, 3.378, -2.290 ] }, { "index": 298, "ntaa": "A-leu", "nt": "///a/1274", "aa": "///j/42", "trs_dist": -7.211, "rot_dist": -80.860, "six_params": [ -0.386, 6.277, -3.529, -6.451, 7.130, -80.384 ], "C_alpha": [ 3.439, 5.042, -3.840 ] }, { "index": 299, "ntaa": "A-pro", "nt": "///a/1274", "aa": "///j/43", "trs_dist": -7.081, "rot_dist": -77.371, "six_params": [ 0.895, -0.337, -7.016, 74.170, 17.213, -14.925 ], "C_alpha": [ 0.416, 3.954, -5.890 ] }, { "index": 300, "ntaa": "U-arg", "nt": "///a/1275", "aa": "///j/9", "trs_dist": -10.403, "rot_dist": 141.634, "six_params": [ 1.138, -10.339, 0.202, 48.972, 28.405, 136.172 ], "C_alpha": [ 8.985, -2.941, -4.322 ] }, { "index": 301, "ntaa": "A-val", "nt": "///a/1283", "aa": "///i/72", "trs_dist": 5.573, "rot_dist": 115.548, "six_params": [ -0.712, -5.495, 0.602, -19.455, -83.916, 86.229 ], "C_alpha": [ 2.748, -4.773, 0.821 ] }, { "index": 302, "ntaa": "G-lys", "nt": "///a/1291", "aa": "///g/114", "trs_dist": -7.690, "rot_dist": 77.120, "six_params": [ -6.648, 3.670, -1.212, 47.549, -9.569, 61.895 ], "C_alpha": [ -7.677, 0.025, -0.173 ] }, { "index": 303, "ntaa": "G-ser", "nt": "///a/1291", "aa": "///g/115", "trs_dist": -5.826, "rot_dist": 76.968, "six_params": [ -4.720, -1.553, 3.042, 31.483, -68.066, 18.754 ], "C_alpha": [ -5.099, -2.772, -0.577 ] }, { "index": 304, "ntaa": "U-glu", "nt": "///a/1292", "aa": "///g/113", "trs_dist": 6.218, "rot_dist": 129.084, "six_params": [ -1.476, 0.501, 6.019, -13.247, 10.932, 128.464 ], "C_alpha": [ -1.468, -0.297, 6.039 ] }, { "index": 305, "ntaa": "U-lys", "nt": "///a/1292", "aa": "///g/114", "trs_dist": 3.463, "rot_dist": 85.254, "six_params": [ 0.246, 1.843, 2.922, 62.404, 30.652, 52.820 ], "C_alpha": [ 0.942, 0.597, 3.269 ] }, { "index": 306, "ntaa": "U-ser", "nt": "///a/1292", "aa": "///g/115", "trs_dist": 3.868, "rot_dist": 45.257, "six_params": [ 3.132, -1.872, 1.285, 34.650, -25.218, 14.901 ], "C_alpha": [ 3.118, -1.884, 1.332 ] }, { "index": 307, "ntaa": "U-arg", "nt": "///a/1292", "aa": "///g/119", "trs_dist": 8.601, "rot_dist": -77.319, "six_params": [ 2.582, -8.095, 1.331, -60.346, -26.445, -42.980 ], "C_alpha": [ -0.645, -6.394, 5.710 ] }, { "index": 308, "ntaa": "C-his", "nt": "///a/1296", "aa": "///m/14", "trs_dist": -6.929, "rot_dist": 68.975, "six_params": [ 6.462, -0.185, -2.497, 39.140, 55.887, 10.783 ], "C_alpha": [ 4.416, 1.565, -5.089 ] }, { "index": 309, "ntaa": "C-ile", "nt": "///a/1296", "aa": "///m/17", "trs_dist": -7.605, "rot_dist": -165.800, "six_params": [ -4.384, -2.661, -5.617, 56.666, 0.882, -163.855 ], "C_alpha": [ -0.303, 4.441, -6.171 ] }, { "index": 310, "ntaa": "C-arg", "nt": "///a/1302", "aa": "///m/98", "trs_dist": 12.046, "rot_dist": 109.560, "six_params": [ 11.182, 4.384, -0.923, -18.602, -63.410, 93.059 ], "C_alpha": [ 3.619, 10.620, 4.396 ] }, { "index": 311, "ntaa": "G-arg", "nt": "///a/1303", "aa": "///m/98", "trs_dist": 13.412, "rot_dist": 105.625, "six_params": [ 12.158, 3.478, -4.469, -29.244, -75.206, 75.057 ], "C_alpha": [ 8.005, 10.312, 3.108 ] }, { "index": 312, "ntaa": "G-pro", "nt": "///a/1306", "aa": "///s/2", "trs_dist": 6.351, "rot_dist": -78.685, "six_params": [ 1.956, -1.236, 5.915, -74.147, 25.348, -7.791 ], "C_alpha": [ 3.347, 2.178, 4.964 ] }, { "index": 313, "ntaa": "U-pro", "nt": "///a/1307", "aa": "///s/2", "trs_dist": 6.207, "rot_dist": 145.131, "six_params": [ 4.303, -3.349, -2.965, -25.748, -80.580, 132.210 ], "C_alpha": [ 5.232, 3.079, 1.293 ] }, { "index": 314, "ntaa": "U-ser", "nt": "///a/1307", "aa": "///s/4", "trs_dist": 8.949, "rot_dist": -169.187, "six_params": [ -6.311, 3.801, 5.080, -3.411, -38.911, -168.524 ], "C_alpha": [ 3.129, 7.975, 2.580 ] }, { "index": 315, "ntaa": "C-pro", "nt": "///a/1308", "aa": "///s/2", "trs_dist": -5.123, "rot_dist": -90.558, "six_params": [ 3.475, 3.053, 2.201, -30.231, 47.083, -74.355 ], "C_alpha": [ 5.080, 0.301, -0.170 ] }, { "index": 316, "ntaa": "C-arg", "nt": "///a/1308", "aa": "///s/3", "trs_dist": 6.243, "rot_dist": 149.185, "six_params": [ 3.323, -5.284, -0.087, -53.745, -50.667, 141.175 ], "C_alpha": [ 5.033, 0.888, 3.616 ] }, { "index": 317, "ntaa": "G-arg", "nt": "///a/1310", "aa": "///s/3", "trs_dist": -4.866, "rot_dist": 112.997, "six_params": [ 0.186, -3.257, -3.611, -83.412, 1.824, 84.631 ], "C_alpha": [ 3.363, -3.494, -0.519 ] }, { "index": 318, "ntaa": "C-arg", "nt": "///a/1311", "aa": "///n/53", "trs_dist": -6.426, "rot_dist": 134.867, "six_params": [ 2.632, 4.124, -4.166, -73.365, -17.888, 121.924 ], "C_alpha": [ 0.816, 3.429, -5.376 ] }, { "index": 319, "ntaa": "C-arg", "nt": "///a/1311", "aa": "///n/59", "trs_dist": -9.878, "rot_dist": 58.284, "six_params": [ 7.929, 1.823, -5.601, 29.389, -38.909, 32.956 ], "C_alpha": [ 8.065, 5.327, -2.036 ] }, { "index": 320, "ntaa": "C-arg", "nt": "///a/1311", "aa": "///s/37", "trs_dist": 8.499, "rot_dist": -156.278, "six_params": [ -0.116, -7.941, 3.027, -59.096, 29.602, -151.611 ], "C_alpha": [ -4.991, -2.445, 6.435 ] }, { "index": 321, "ntaa": "A-arg", "nt": "///a/1312", "aa": "///s/37", "trs_dist": 10.473, "rot_dist": 159.351, "six_params": [ 2.337, 9.513, -3.706, 29.081, -70.823, 153.604 ], "C_alpha": [ -8.903, 5.492, 0.665 ] }, { "index": 322, "ntaa": "C-arg", "nt": "///a/1314", "aa": "///s/36", "trs_dist": -5.160, "rot_dist": -150.432, "six_params": [ -0.974, 3.220, -3.912, -41.566, -8.375, -148.231 ], "C_alpha": [ 1.381, 1.059, -4.860 ] }, { "index": 323, "ntaa": "C-arg", "nt": "///a/1314", "aa": "///s/37", "trs_dist": -6.370, "rot_dist": 166.788, "six_params": [ 3.260, -2.713, -4.753, -22.795, -18.944, 166.332 ], "C_alpha": [ 3.984, 3.495, -3.537 ] }, { "index": 324, "ntaa": "C-lys", "nt": "///a/1314", "aa": "///s/70", "trs_dist": -9.614, "rot_dist": -68.152, "six_params": [ -4.230, 5.703, -6.482, 40.017, -55.148, -1.501 ], "C_alpha": [ -1.176, 7.857, -5.398 ] }, { "index": 325, "ntaa": "C-gly", "nt": "///a/1314", "aa": "///s/72", "trs_dist": -5.646, "rot_dist": -78.291, "six_params": [ -4.509, 3.369, 0.451, -54.180, -52.891, -21.601 ], "C_alpha": [ -3.318, 3.428, -3.070 ] }, { "index": 326, "ntaa": "U-arg", "nt": "///a/1315", "aa": "///s/36", "trs_dist": -7.844, "rot_dist": 179.357, "six_params": [ 0.682, -4.711, -6.235, 44.930, 9.806, 179.301 ], "C_alpha": [ 1.968, 0.061, -7.594 ] }, { "index": 327, "ntaa": "U-thr", "nt": "///a/1315", "aa": "///s/77", "trs_dist": -8.515, "rot_dist": 57.382, "six_params": [ -7.775, 2.337, 2.566, -37.590, -42.906, 6.509 ], "C_alpha": [ -8.157, 2.099, -1.274 ] }, { "index": 328, "ntaa": "G-pro", "nt": "///a/1317", "aa": "///s/2", "trs_dist": -5.813, "rot_dist": -113.532, "six_params": [ 3.589, 3.059, -3.399, 45.829, -52.986, -95.976 ], "C_alpha": [ 5.740, -0.772, -0.110 ] }, { "index": 329, "ntaa": "C-gln", "nt": "///a/1336", "aa": "///i/126", "trs_dist": 10.241, "rot_dist": 134.006, "six_params": [ 1.864, 9.272, -3.929, 49.103, -9.919, 128.908 ], "C_alpha": [ -8.173, 6.144, 0.445 ] }, { "index": 330, "ntaa": "G-arg", "nt": "///a/1341", "aa": "///i/12", "trs_dist": 10.965, "rot_dist": -85.013, "six_params": [ 2.192, 10.728, 0.583, 29.282, 7.777, -80.410 ], "C_alpha": [ 8.382, 6.320, 3.100 ] }, { "index": 331, "ntaa": "G-arg", "nt": "///a/1341", "aa": "///i/109", "trs_dist": -8.710, "rot_dist": -106.607, "six_params": [ -4.848, 6.459, -3.260, 0.663, 26.235, -104.299 ], "C_alpha": [ 1.749, 8.275, -2.042 ] }, { "index": 332, "ntaa": "A-ser", "nt": "///a/1344", "aa": "///g/33", "trs_dist": 6.273, "rot_dist": 97.354, "six_params": [ -3.014, 5.479, 0.492, 38.876, -58.739, 72.148 ], "C_alpha": [ -5.806, 2.294, 0.707 ] }, { "index": 333, "ntaa": "A-gly", "nt": "///a/1344", "aa": "///g/34", "trs_dist": -5.829, "rot_dist": -19.184, "six_params": [ -5.574, -1.681, 0.286, 11.569, -13.409, -7.404 ], "C_alpha": [ -5.680, -1.295, -0.515 ] }, { "index": 334, "ntaa": "A-lys", "nt": "///a/1344", "aa": "///i/120", "trs_dist": 11.369, "rot_dist": 26.915, "six_params": [ 8.890, 6.730, -2.222, 18.704, -19.155, 2.796 ], "C_alpha": [ 8.855, 7.085, 0.398 ] }, { "index": 335, "ntaa": "U-ser", "nt": "///a/1345", "aa": "///g/33", "trs_dist": -8.657, "rot_dist": 89.526, "six_params": [ -3.834, 7.064, -3.217, 3.535, -73.855, 54.580 ], "C_alpha": [ -4.379, 5.843, -4.664 ] }, { "index": 336, "ntaa": "U-lys", "nt": "///a/1345", "aa": "///i/120", "trs_dist": -10.354, "rot_dist": -48.196, "six_params": [ 8.556, 4.635, -3.539, 1.320, -41.269, -25.422 ], "C_alpha": [ 10.021, 2.506, -0.251 ] }, { "index": 337, "ntaa": "C-arg", "nt": "///a/1353", "aa": "///n/75", "trs_dist": 11.711, "rot_dist": 99.246, "six_params": [ 10.814, 1.723, 4.153, -86.312, 4.874, 54.495 ], "C_alpha": [ 7.924, 8.485, 1.419 ] }, { "index": 338, "ntaa": "A-ser", "nt": "///a/1354", "aa": "///n/58", "trs_dist": -7.086, "rot_dist": 78.144, "six_params": [ 4.233, 4.712, -3.176, -38.528, -13.380, 68.158 ], "C_alpha": [ 1.907, 5.490, -4.053 ] }, { "index": 339, "ntaa": "C-lys", "nt": "///a/1361", "aa": "///i/114", "trs_dist": 10.641, "rot_dist": 142.562, "six_params": [ 6.257, 6.280, 5.886, 70.316, 9.412, 133.585 ], "C_alpha": [ 0.954, 7.035, 7.920 ] }, { "index": 340, "ntaa": "A-lys", "nt": "///a/1362", "aa": "///i/114", "trs_dist": 10.106, "rot_dist": 119.333, "six_params": [ 8.619, 4.843, 2.096, 55.418, -8.710, 110.186 ], "C_alpha": [ 2.195, 8.652, 4.726 ] }, { "index": 341, "ntaa": "U-ser", "nt": "///a/1366", "aa": "///g/33", "trs_dist": 6.684, "rot_dist": 116.388, "six_params": [ -5.520, 3.663, 0.888, 76.472, -31.451, 90.822 ], "C_alpha": [ -6.143, -2.187, 1.513 ] }, { "index": 342, "ntaa": "U-gly", "nt": "///a/1366", "aa": "///g/34", "trs_dist": 6.204, "rot_dist": -176.519, "six_params": [ -1.756, -5.889, 0.853, -35.135, 17.359, -176.305 ], "C_alpha": [ -5.394, 1.293, 2.824 ] }, { "index": 343, "ntaa": "U-lys", "nt": "///a/1366", "aa": "///i/13", "trs_dist": 13.458, "rot_dist": 61.668, "six_params": [ 8.798, 10.051, -1.636, 59.375, 14.187, 9.187 ], "C_alpha": [ 8.021, 10.498, 2.512 ] }, { "index": 344, "ntaa": "G-lys", "nt": "///a/1367", "aa": "///i/13", "trs_dist": -10.468, "rot_dist": -55.459, "six_params": [ 8.093, 5.106, -4.245, 41.762, -16.128, -33.614 ], "C_alpha": [ 9.851, 3.379, -1.011 ] }, { "index": 345, "ntaa": "A-arg", "nt": "///a/1371", "aa": "///g/3", "trs_dist": 11.151, "rot_dist": 91.269, "six_params": [ -8.109, 6.255, 4.411, -10.557, 13.917, 89.946 ], "C_alpha": [ -10.057, -0.604, 4.758 ] }, { "index": 346, "ntaa": "A-ala", "nt": "///a/1371", "aa": "///g/7", "trs_dist": 4.297, "rot_dist": 106.454, "six_params": [ -0.716, -0.488, 4.208, -6.225, 37.130, 101.534 ], "C_alpha": [ 0.619, 0.353, 4.258 ] }, { "index": 347, "ntaa": "G-arg", "nt": "///a/1373", "aa": "///g/3", "trs_dist": 6.706, "rot_dist": 143.454, "six_params": [ -1.531, -3.963, 5.189, -37.092, 63.325, 133.962 ], "C_alpha": [ 2.567, 0.767, 6.134 ] }, { "index": 348, "ntaa": "U-arg", "nt": "///a/1374", "aa": "///g/3", "trs_dist": 6.298, "rot_dist": 125.889, "six_params": [ 1.969, -3.173, 5.071, -55.110, 57.308, 107.453 ], "C_alpha": [ 3.273, 3.100, 4.385 ] }, { "index": 349, "ntaa": "U-arg", "nt": "///a/1375", "aa": "///g/78", "trs_dist": -4.481, "rot_dist": -155.962, "six_params": [ 1.006, -2.931, -3.237, -66.494, 31.692, -149.842 ], "C_alpha": [ -4.041, -1.444, -1.285 ] }, { "index": 350, "ntaa": "U-arg", "nt": "///a/1375", "aa": "///g/79", "trs_dist": 6.815, "rot_dist": -120.408, "six_params": [ -3.684, -5.676, -0.810, -65.209, -36.045, -102.739 ], "C_alpha": [ -6.678, -0.524, 1.290 ] }, { "index": 351, "ntaa": "A-thr", "nt": "///a/1390", "aa": "///e/25", "trs_dist": -7.149, "rot_dist": -138.006, "six_params": [ -0.366, -7.098, 0.766, 23.697, -47.375, -132.802 ], "C_alpha": [ -6.635, -2.504, -0.874 ] }, { "index": 352, "ntaa": "A-thr", "nt": "///a/1392", "aa": "///e/25", "trs_dist": 7.748, "rot_dist": -66.260, "six_params": [ 5.991, 4.867, 0.675, 48.767, -15.626, -43.557 ], "C_alpha": [ 6.761, 1.579, 3.405 ] }, { "index": 353, "ntaa": "A-lys", "nt": "///a/1392", "aa": "///e/27", "trs_dist": -5.303, "rot_dist": -108.340, "six_params": [ 2.513, 3.650, -2.913, -39.856, -66.040, -83.046 ], "C_alpha": [ 4.827, -0.593, -2.138 ] }, { "index": 354, "ntaa": "A-gly", "nt": "///a/1392", "aa": "///e/28", "trs_dist": -4.834, "rot_dist": -49.279, "six_params": [ 4.105, -2.260, -1.186, -16.019, 23.552, -40.640 ], "C_alpha": [ 2.717, -3.640, -1.681 ] }, { "index": 355, "ntaa": "A-glu", "nt": "///a/1435", "aa": "///P/113", "trs_dist": -5.186, "rot_dist": -149.291, "six_params": [ 3.416, -3.900, 0.117, 22.605, 75.991, -139.776 ], "C_alpha": [ -2.532, -3.608, -2.701 ] }, { "index": 356, "ntaa": "A-val", "nt": "///a/1435", "aa": "///P/116", "trs_dist": 6.681, "rot_dist": 80.454, "six_params": [ -4.163, -2.116, 4.777, -48.528, -29.153, 59.735 ], "C_alpha": [ -4.490, -2.815, 4.046 ] }, { "index": 357, "ntaa": "A-lys", "nt": "///a/1486", "aa": "///l/43", "trs_dist": -7.903, "rot_dist": -132.821, "six_params": [ 0.654, 7.782, 1.211, -47.880, -68.879, -114.903 ], "C_alpha": [ 6.912, 3.442, -1.720 ] }, { "index": 358, "ntaa": "A-lys", "nt": "///a/1486", "aa": "///l/44", "trs_dist": -4.847, "rot_dist": -65.476, "six_params": [ 2.382, 3.295, -2.638, -38.758, -41.311, -34.296 ], "C_alpha": [ 3.918, 1.288, -2.594 ] }, { "index": 359, "ntaa": "U-arg", "nt": "///a/1500", "aa": "///k/128", "trs_dist": -8.825, "rot_dist": 150.553, "six_params": [ 1.988, 8.597, -0.134, -57.086, -16.618, 145.964 ], "C_alpha": [ -6.557, 4.396, -3.929 ] }, { "index": 360, "ntaa": "A-lys", "nt": "///a/1501", "aa": "///u/46", "trs_dist": -10.146, "rot_dist": -82.834, "six_params": [ 6.636, -2.929, -7.094, 46.755, 1.768, -70.412 ], "C_alpha": [ 5.417, -3.632, -7.769 ] }, { "index": 361, "ntaa": "G-thr", "nt": "///a/1520", "aa": "///u/42", "trs_dist": 10.096, "rot_dist": -104.798, "six_params": [ -6.830, 6.711, 3.200, -15.704, 73.722, -79.107 ], "C_alpha": [ 1.713, 8.110, 5.757 ] }, { "index": 362, "ntaa": "C-thr", "nt": "///a/1521", "aa": "///u/42", "trs_dist": -9.264, "rot_dist": -139.980, "six_params": [ -3.159, 8.460, -2.066, -3.620, 72.746, -129.669 ], "C_alpha": [ 5.983, 7.072, -0.043 ] }, { "index": 363, "ntaa": "U-lys", "nt": "///a/1522", "aa": "///u/46", "trs_dist": 10.759, "rot_dist": -119.314, "six_params": [ -3.754, 8.556, 5.335, -34.370, 38.980, -111.614 ], "C_alpha": [ 6.958, 7.396, 3.547 ] }, { "index": 364, "ntaa": "G-lys", "nt": "///a/1524", "aa": "///u/46", "trs_dist": 10.531, "rot_dist": -129.747, "six_params": [ -3.075, 9.813, 2.272, 3.155, 40.702, -126.119 ], "C_alpha": [ 7.752, 6.224, 3.460 ] }, { "index": 365, "ntaa": "C-lys", "nt": "///a/1527", "aa": "///u/54", "trs_dist": 8.914, "rot_dist": -164.819, "six_params": [ -2.500, 4.391, 7.344, 42.554, 43.785, -162.358 ], "C_alpha": [ 1.409, -0.462, 8.791 ] }, { "index": 366, "ntaa": "A-ala", "nt": "///A/5", "aa": "///J/134", "trs_dist": 7.186, "rot_dist": 33.719, "six_params": [ -7.074, 0.349, 1.217, 21.700, -3.772, 25.692 ], "C_alpha": [ -6.959, -1.450, 1.030 ] }, { "index": 367, "ntaa": "A-gln", "nt": "///A/6", "aa": "///J/135", "trs_dist": -9.111, "rot_dist": -96.410, "six_params": [ -6.283, -2.351, -6.165, 8.503, 85.398, -49.004 ], "C_alpha": [ -8.932, 1.773, -0.418 ] }, { "index": 368, "ntaa": "G-asn", "nt": "///A/23", "aa": "///S/77", "trs_dist": 7.870, "rot_dist": 74.172, "six_params": [ -6.448, 2.194, 3.942, -8.336, -37.286, 64.823 ], "C_alpha": [ -7.477, -1.906, 1.506 ] }, { "index": 369, "ntaa": "G-glu", "nt": "///A/24", "aa": "///S/78", "trs_dist": -8.913, "rot_dist": -90.805, "six_params": [ -7.958, -2.296, -3.291, -34.289, 30.288, -80.708 ], "C_alpha": [ -8.270, 3.291, -0.317 ] }, { "index": 370, "ntaa": "A-arg", "nt": "///A/28", "aa": "///Q/11", "trs_dist": 11.206, "rot_dist": 64.177, "six_params": [ -11.084, -0.366, 1.608, 63.556, -8.305, 3.413 ], "C_alpha": [ -11.122, -1.280, 0.410 ] }, { "index": 371, "ntaa": "A-ser", "nt": "///A/38", "aa": "///E/42", "trs_dist": -7.789, "rot_dist": 141.373, "six_params": [ 0.568, 7.768, -0.007, -11.389, 10.321, 141.009 ], "C_alpha": [ -7.079, 3.071, -0.818 ] }, { "index": 372, "ntaa": "A-arg", "nt": "///A/53", "aa": "///4/35", "trs_dist": 9.658, "rot_dist": 173.034, "six_params": [ 0.140, 9.017, 3.458, 61.736, -26.245, 171.640 ], "C_alpha": [ -6.048, -0.712, 7.492 ] }, { "index": 373, "ntaa": "A-ala", "nt": "///A/72", "aa": "///Y/51", "trs_dist": -7.521, "rot_dist": 58.749, "six_params": [ -2.624, 6.403, -2.948, -38.493, 40.788, 18.254 ], "C_alpha": [ -4.634, 4.572, -3.773 ] }, { "index": 374, "ntaa": "A-lys", "nt": "///A/72", "aa": "///Y/54", "trs_dist": -5.820, "rot_dist": 96.429, "six_params": [ -0.835, 1.723, -5.496, 6.748, -58.075, 80.436 ], "C_alpha": [ 0.130, 2.794, -5.104 ] }, { "index": 375, "ntaa": "A-thr", "nt": "///A/72", "aa": "///Y/55", "trs_dist": -4.150, "rot_dist": 28.684, "six_params": [ -0.899, 0.289, -4.041, -21.225, 6.334, 18.341 ], "C_alpha": [ -1.042, -0.634, -3.972 ] }, { "index": 376, "ntaa": "A-asn", "nt": "///A/72", "aa": "///Y/58", "trs_dist": -6.431, "rot_dist": 105.857, "six_params": [ -1.175, -5.089, -3.753, 9.847, -87.358, 66.271 ], "C_alpha": [ 4.167, -2.936, -3.913 ] }, { "index": 377, "ntaa": "C-thr", "nt": "///A/76", "aa": "///Y/55", "trs_dist": -9.510, "rot_dist": 44.466, "six_params": [ -8.148, 4.130, 2.645, -17.071, -40.696, 5.581 ], "C_alpha": [ -8.642, 3.841, -0.963 ] }, { "index": 378, "ntaa": "G-lys", "nt": "///A/83", "aa": "///U/90", "trs_dist": -10.857, "rot_dist": -133.151, "six_params": [ -1.860, 9.368, 5.162, -60.582, -47.057, -119.077 ], "C_alpha": [ 7.620, 7.609, -1.240 ] }, { "index": 379, "ntaa": "G-arg", "nt": "///A/85", "aa": "///U/6", "trs_dist": -13.040, "rot_dist": 93.987, "six_params": [ 10.519, 6.424, -4.259, -6.341, -4.680, 93.734 ], "C_alpha": [ 2.795, 12.034, -4.176 ] }, { "index": 380, "ntaa": "G-lys", "nt": "///A/85", "aa": "///U/26", "trs_dist": 12.262, "rot_dist": -81.032, "six_params": [ -0.046, 10.709, 5.972, -44.257, -29.051, -63.739 ], "C_alpha": [ 5.574, 10.829, 1.347 ] }, { "index": 381, "ntaa": "U-arg", "nt": "///A/100", "aa": "///U/5", "trs_dist": -7.798, "rot_dist": 167.290, "six_params": [ -3.278, -6.933, 1.411, 32.565, 7.220, 166.730 ], "C_alpha": [ 6.640, -4.018, -0.385 ] }, { "index": 382, "ntaa": "U-lys", "nt": "///A/101", "aa": "///U/90", "trs_dist": 8.005, "rot_dist": -74.327, "six_params": [ 7.713, 2.052, -0.620, -36.333, -53.515, -38.796 ], "C_alpha": [ 7.653, -0.236, 2.265 ] }, { "index": 383, "ntaa": "G-thr", "nt": "///A/110", "aa": "///Y/55", "trs_dist": 8.976, "rot_dist": 178.116, "six_params": [ -3.898, 7.915, -1.651, 49.019, 9.173, 177.922 ], "C_alpha": [ -7.887, -3.738, 2.076 ] }, { "index": 384, "ntaa": "G-arg", "nt": "///A/124", "aa": "///4/19", "trs_dist": 8.081, "rot_dist": 126.007, "six_params": [ -0.881, -1.925, 7.799, -48.532, 31.743, 117.471 ], "C_alpha": [ -0.566, 1.902, 7.842 ] }, { "index": 385, "ntaa": "G-thr", "nt": "///A/125", "aa": "///4/9", "trs_dist": -7.386, "rot_dist": 166.265, "six_params": [ -2.499, 6.705, 1.834, -78.329, -26.723, 161.660 ], "C_alpha": [ -6.446, -1.299, -3.338 ] }, { "index": 386, "ntaa": "G-leu", "nt": "///A/125", "aa": "///4/10", "trs_dist": -5.743, "rot_dist": 154.077, "six_params": [ -0.029, 2.711, -5.062, 15.786, 6.636, 153.780 ], "C_alpha": [ -3.356, 0.469, -4.635 ] }, { "index": 387, "ntaa": "G-ala", "nt": "///A/125", "aa": "///4/13", "trs_dist": -8.800, "rot_dist": 167.853, "six_params": [ 3.817, 7.919, -0.411, -52.610, -17.870, 166.263 ], "C_alpha": [ -6.508, 4.922, -3.290 ] }, { "index": 388, "ntaa": "A-phe", "nt": "///A/126", "aa": "///4/18", "trs_dist": 6.460, "rot_dist": 117.226, "six_params": [ -2.257, -0.555, 6.027, -80.644, 26.513, 90.214 ], "C_alpha": [ -3.188, 1.930, 5.274 ] }, { "index": 389, "ntaa": "A-thr", "nt": "///A/126", "aa": "///4/43", "trs_dist": 5.414, "rot_dist": -92.857, "six_params": [ 0.993, -5.041, 1.707, -39.229, -4.098, -85.857 ], "C_alpha": [ -2.176, -3.633, 3.338 ] }, { "index": 390, "ntaa": "A-lys", "nt": "///A/141", "aa": "///T/44", "trs_dist": -7.738, "rot_dist": 60.549, "six_params": [ 2.785, -1.077, -7.139, -30.940, 48.825, 18.861 ], "C_alpha": [ 0.184, -3.053, -7.109 ] }, { "index": 391, "ntaa": "C-lys", "nt": "///A/164", "aa": "///X/44", "trs_dist": 6.175, "rot_dist": 129.743, "six_params": [ -2.800, -5.243, -1.675, 1.780, 78.372, 113.548 ], "C_alpha": [ 2.597, -5.556, 0.403 ] }, { "index": 392, "ntaa": "A-phe", "nt": "///A/196", "aa": "///L/50", "trs_dist": 8.801, "rot_dist": -105.284, "six_params": [ 4.393, 1.830, 7.403, 10.655, -86.216, -66.635 ], "C_alpha": [ -1.017, 1.923, 8.519 ] }, { "index": 393, "ntaa": "A-gly", "nt": "///A/196", "aa": "///L/52", "trs_dist": 4.624, "rot_dist": -100.466, "six_params": [ 1.778, 0.665, 4.217, 77.105, -40.018, -56.495 ], "C_alpha": [ -0.831, -2.108, 4.029 ] }, { "index": 394, "ntaa": "G-arg", "nt": "///A/205", "aa": "///X/26", "trs_dist": -8.380, "rot_dist": 146.911, "six_params": [ -3.380, -6.870, 3.406, 36.615, -50.879, 141.048 ], "C_alpha": [ 5.567, -6.231, -0.604 ] }, { "index": 395, "ntaa": "G-pro", "nt": "///A/242", "aa": "///5/2", "trs_dist": -8.251, "rot_dist": 148.436, "six_params": [ 6.104, -0.349, -5.541, 6.674, -19.583, 147.900 ], "C_alpha": [ 2.018, 6.691, -4.432 ] }, { "index": 396, "ntaa": "G-lys", "nt": "///A/242", "aa": "///5/5", "trs_dist": 8.827, "rot_dist": -86.907, "six_params": [ -4.032, 5.414, 5.688, -42.898, -11.567, -76.718 ], "C_alpha": [ 0.866, 8.283, 2.888 ] }, { "index": 397, "ntaa": "U-ser", "nt": "///A/246", "aa": "///5/8", "trs_dist": -5.015, "rot_dist": 139.655, "six_params": [ -1.259, -4.854, 0.103, 5.956, -3.550, 139.578 ], "C_alpha": [ 4.116, -2.854, -0.180 ] }, { "index": 398, "ntaa": "U-lys", "nt": "///A/246", "aa": "///5/12", "trs_dist": 10.296, "rot_dist": 142.662, "six_params": [ 3.563, -9.356, 2.403, 20.340, -31.626, 140.472 ], "C_alpha": [ 10.160, -0.461, 1.603 ] }, { "index": 399, "ntaa": "G-ser", "nt": "///A/247", "aa": "///5/8", "trs_dist": -4.394, "rot_dist": 106.674, "six_params": [ -1.566, -2.667, -3.121, -10.476, -15.196, 105.551 ], "C_alpha": [ 1.646, -2.702, -3.037 ] }, { "index": 400, "ntaa": "G-lys", "nt": "///A/247", "aa": "///5/12", "trs_dist": 8.249, "rot_dist": 117.487, "six_params": [ 0.710, -8.218, 0.048, -4.856, -45.808, 111.360 ], "C_alpha": [ 7.096, -4.160, 0.653 ] }, { "index": 401, "ntaa": "C-lys", "nt": "///A/249", "aa": "///L/63", "trs_dist": 10.258, "rot_dist": 35.495, "six_params": [ -9.567, 1.379, 3.436, 20.464, 28.087, 7.344 ], "C_alpha": [ -8.441, 0.002, 5.814 ] }, { "index": 402, "ntaa": "C-lys", "nt": "///A/249", "aa": "///5/12", "trs_dist": 9.490, "rot_dist": 73.141, "six_params": [ -9.116, -0.159, 2.633, -63.927, -20.966, 30.557 ], "C_alpha": [ -9.311, -1.718, 0.697 ] }, { "index": 403, "ntaa": "G-ser", "nt": "///A/252", "aa": "///5/8", "trs_dist": -7.257, "rot_dist": 40.750, "six_params": [ 7.124, 1.296, -0.486, 7.237, 3.944, 39.943 ], "C_alpha": [ 6.218, 3.676, -0.656 ] }, { "index": 404, "ntaa": "G-lys", "nt": "///A/254", "aa": "///5/5", "trs_dist": 6.408, "rot_dist": -75.614, "six_params": [ 5.075, 3.428, -1.886, 9.034, -36.784, -66.706 ], "C_alpha": [ 6.402, -0.018, 0.088 ] }, { "index": 405, "ntaa": "A-arg", "nt": "///A/294", "aa": "///U/81", "trs_dist": 13.224, "rot_dist": 68.117, "six_params": [ 11.070, 7.190, 0.799, 42.050, -7.938, 54.306 ], "C_alpha": [ 6.829, 10.558, 4.072 ] }, { "index": 406, "ntaa": "A-thr", "nt": "///A/314", "aa": "///E/130", "trs_dist": 6.490, "rot_dist": 62.573, "six_params": [ 3.033, 3.886, 4.222, 7.184, -57.651, 24.328 ], "C_alpha": [ -0.200, 3.616, 5.378 ] }, { "index": 407, "ntaa": "A-asn", "nt": "///A/314", "aa": "///E/162", "trs_dist": 6.200, "rot_dist": 91.140, "six_params": [ -5.042, 3.071, -1.895, 48.938, 50.699, 62.030 ], "C_alpha": [ -5.943, 0.041, 1.778 ] }, { "index": 408, "ntaa": "A-leu", "nt": "///A/314", "aa": "///E/163", "trs_dist": 4.473, "rot_dist": 76.389, "six_params": [ -1.761, 0.032, 4.112, 45.173, -54.923, 29.945 ], "C_alpha": [ -2.946, -2.168, 2.574 ] }, { "index": 409, "ntaa": "U-leu", "nt": "///A/315", "aa": "///E/158", "trs_dist": -8.709, "rot_dist": 164.760, "six_params": [ 1.614, 6.973, -4.961, -25.236, -57.962, 162.086 ], "C_alpha": [ -5.124, 5.038, -4.913 ] }, { "index": 410, "ntaa": "U-arg", "nt": "///A/315", "aa": "///E/161", "trs_dist": -13.515, "rot_dist": -96.197, "six_params": [ -13.049, 1.722, -3.067, -53.977, 2.665, -82.873 ], "C_alpha": [ -9.696, 8.834, -3.223 ] }, { "index": 411, "ntaa": "G-asn", "nt": "///A/317", "aa": "///E/162", "trs_dist": -7.677, "rot_dist": 110.540, "six_params": [ -1.450, 7.335, -1.743, -60.269, -33.083, 92.697 ], "C_alpha": [ -4.156, 3.444, -5.466 ] }, { "index": 412, "ntaa": "G-ser", "nt": "///A/321", "aa": "///U/67", "trs_dist": 7.283, "rot_dist": 52.092, "six_params": [ -7.161, -0.510, 1.231, -4.259, -6.588, 51.539 ], "C_alpha": [ -6.305, -3.564, 0.838 ] }, { "index": 413, "ntaa": "G-gly", "nt": "///A/323", "aa": "///U/15", "trs_dist": 5.830, "rot_dist": -71.765, "six_params": [ 2.805, 4.752, 1.882, 58.789, 37.813, -17.403 ], "C_alpha": [ 4.112, 2.870, 2.981 ] }, { "index": 414, "ntaa": "G-lys", "nt": "///A/323", "aa": "///U/16", "trs_dist": 4.308, "rot_dist": 88.846, "six_params": [ 3.894, -1.519, -1.044, -19.423, -84.805, 20.146 ], "C_alpha": [ 3.679, -0.798, 2.087 ] }, { "index": 415, "ntaa": "C-ser", "nt": "///A/329", "aa": "///U/67", "trs_dist": 7.535, "rot_dist": 141.079, "six_params": [ -0.144, 7.526, 0.355, 18.258, 17.682, 140.061 ], "C_alpha": [ -6.936, 2.520, 1.558 ] }, { "index": 416, "ntaa": "C-ser", "nt": "///A/330", "aa": "///U/67", "trs_dist": -9.746, "rot_dist": 105.216, "six_params": [ 3.757, 7.766, -4.536, 9.117, 0.928, 104.934 ], "C_alpha": [ -4.165, 7.891, -3.937 ] }, { "index": 417, "ntaa": "A-lys", "nt": "///A/362", "aa": "///X/61", "trs_dist": 11.211, "rot_dist": 99.236, "six_params": [ -9.138, 4.059, 5.071, -71.953, 21.993, 70.240 ], "C_alpha": [ -10.697, 0.772, 3.277 ] }, { "index": 418, "ntaa": "G-arg", "nt": "///A/363", "aa": "///X/57", "trs_dist": 8.226, "rot_dist": 72.258, "six_params": [ 4.444, 6.922, 0.075, 52.566, 49.440, 3.982 ], "C_alpha": [ 4.502, 6.774, 1.237 ] }, { "index": 419, "ntaa": "G-lys", "nt": "///A/363", "aa": "///X/61", "trs_dist": -8.452, "rot_dist": -78.950, "six_params": [ 3.471, 2.829, -7.168, 68.754, 31.194, -25.032 ], "C_alpha": [ 3.145, 6.077, -4.968 ] }, { "index": 420, "ntaa": "G-phe", "nt": "///A/370", "aa": "///X/29", "trs_dist": -10.195, "rot_dist": 168.353, "six_params": [ -0.911, 9.955, -2.000, 5.751, 73.373, 165.441 ], "C_alpha": [ -10.140, -0.477, -0.595 ] }, { "index": 421, "ntaa": "U-lys", "nt": "///A/390", "aa": "///X/54", "trs_dist": 11.395, "rot_dist": -94.282, "six_params": [ 1.496, 9.700, 5.789, -36.144, 73.111, -52.140 ], "C_alpha": [ 8.022, 8.061, 0.698 ] }, { "index": 422, "ntaa": "G-lys", "nt": "///A/391", "aa": "///X/54", "trs_dist": -9.299, "rot_dist": -130.606, "six_params": [ 5.871, 7.046, 1.534, -4.265, 73.684, -117.000 ], "C_alpha": [ 8.882, -1.056, -2.538 ] }, { "index": 423, "ntaa": "G-arg", "nt": "///A/391", "aa": "///X/57", "trs_dist": 9.554, "rot_dist": -162.737, "six_params": [ -0.237, 9.469, -1.251, 35.821, 66.953, -158.052 ], "C_alpha": [ 9.184, 1.822, 1.890 ] }, { "index": 424, "ntaa": "U-gln", "nt": "///A/432", "aa": "///E/40", "trs_dist": 11.349, "rot_dist": 46.668, "six_params": [ -10.825, 3.013, -1.589, 21.574, 41.349, 1.694 ], "C_alpha": [ -10.613, 2.737, 2.881 ] }, { "index": 425, "ntaa": "G-gln", "nt": "///A/433", "aa": "///E/40", "trs_dist": -11.261, "rot_dist": -33.319, "six_params": [ -8.192, 4.350, -6.387, 20.282, 22.234, -14.465 ], "C_alpha": [ -8.435, 6.373, -3.841 ] }, { "index": 426, "ntaa": "G-ser", "nt": "///A/433", "aa": "///E/42", "trs_dist": -7.709, "rot_dist": 28.380, "six_params": [ -6.896, 1.929, -2.854, -9.483, 22.736, 14.202 ], "C_alpha": [ -7.471, 0.819, -1.602 ] }, { "index": 427, "ntaa": "A-met", "nt": "///A/434", "aa": "///E/35", "trs_dist": -5.957, "rot_dist": -159.737, "six_params": [ 2.688, 4.646, -2.583, 55.444, 2.391, -157.071 ], "C_alpha": [ 5.736, -1.543, -0.176 ] }, { "index": 428, "ntaa": "A-ala", "nt": "///A/434", "aa": "///E/36", "trs_dist": 4.643, "rot_dist": -143.887, "six_params": [ 1.308, 1.738, 4.102, -38.624, 28.706, -140.313 ], "C_alpha": [ 3.506, -1.076, 2.858 ] }, { "index": 429, "ntaa": "A-arg", "nt": "///A/434", "aa": "///E/39", "trs_dist": 7.208, "rot_dist": -152.475, "six_params": [ -3.860, 4.847, 3.681, 0.779, 11.859, -152.324 ], "C_alpha": [ 3.847, 4.508, 4.094 ] }, { "index": 430, "ntaa": "U-arg", "nt": "///A/439", "aa": "///E/78", "trs_dist": 8.395, "rot_dist": 154.746, "six_params": [ 0.178, 7.899, -2.840, 47.591, -17.325, 152.009 ], "C_alpha": [ -8.036, 2.353, 0.626 ] }, { "index": 431, "ntaa": "G-ser", "nt": "///A/443", "aa": "///E/52", "trs_dist": -9.989, "rot_dist": 102.956, "six_params": [ 8.106, 5.777, -0.839, 50.457, 67.578, 65.656 ], "C_alpha": [ 2.331, 9.337, -2.663 ] }, { "index": 432, "ntaa": "C-arg", "nt": "///A/447", "aa": "///T/71", "trs_dist": 8.844, "rot_dist": -95.800, "six_params": [ -4.846, 7.307, 1.161, 37.807, 49.927, -76.608 ], "C_alpha": [ 1.195, 6.968, 5.285 ] }, { "index": 433, "ntaa": "G-ser", "nt": "///A/449", "aa": "///E/52", "trs_dist": -6.554, "rot_dist": 141.496, "six_params": [ -2.391, -5.295, -3.035, -57.257, -51.757, 130.098 ], "C_alpha": [ 5.113, -3.989, -0.921 ] }, { "index": 434, "ntaa": "G-lys", "nt": "///A/449", "aa": "///4/37", "trs_dist": 8.881, "rot_dist": -107.557, "six_params": [ -0.177, 8.584, 2.269, 2.427, -82.822, -75.982 ], "C_alpha": [ 3.914, 7.768, 1.757 ] }, { "index": 435, "ntaa": "G-val", "nt": "///A/454", "aa": "///4/44", "trs_dist": 6.195, "rot_dist": 147.759, "six_params": [ -1.601, -5.202, 2.960, -41.753, -17.589, 144.981 ], "C_alpha": [ 3.019, -3.208, 4.318 ] }, { "index": 436, "ntaa": "U-his", "nt": "///A/455", "aa": "///4/16", "trs_dist": 10.671, "rot_dist": 87.560, "six_params": [ -7.002, 1.502, 7.911, -72.299, -30.653, 42.333 ], "C_alpha": [ -9.915, 1.801, 3.514 ] }, { "index": 437, "ntaa": "G-arg", "nt": "///A/458", "aa": "///4/34", "trs_dist": 11.600, "rot_dist": -90.490, "six_params": [ 0.687, 9.303, 6.896, -26.675, 85.483, -14.674 ], "C_alpha": [ 5.681, 9.802, 2.480 ] }, { "index": 438, "ntaa": "G-arg", "nt": "///A/458", "aa": "///4/39", "trs_dist": 10.732, "rot_dist": 59.502, "six_params": [ 9.674, 4.643, -0.164, 25.333, -53.457, 6.720 ], "C_alpha": [ 8.226, 4.578, 5.145 ] }, { "index": 439, "ntaa": "G-arg", "nt": "///A/459", "aa": "///4/39", "trs_dist": 10.786, "rot_dist": -65.955, "six_params": [ 8.941, 4.954, -3.441, 19.419, -60.981, -16.868 ], "C_alpha": [ 9.868, 3.648, 2.384 ] }, { "index": 440, "ntaa": "G-lys", "nt": "///A/460", "aa": "///4/37", "trs_dist": 8.562, "rot_dist": -105.546, "six_params": [ 7.004, 3.108, 3.820, -73.406, -7.586, -81.687 ], "C_alpha": [ 8.365, -0.734, 1.625 ] }, { "index": 441, "ntaa": "G-arg", "nt": "///A/460", "aa": "///4/39", "trs_dist": -6.211, "rot_dist": -97.516, "six_params": [ 4.765, -0.319, -3.971, -21.629, -62.169, -76.509 ], "C_alpha": [ 4.316, -4.394, -0.841 ] }, { "index": 442, "ntaa": "A-ile", "nt": "///A/469", "aa": "///U/41", "trs_dist": 8.694, "rot_dist": 78.265, "six_params": [ -6.897, 1.949, 4.922, -22.050, -27.916, 70.898 ], "C_alpha": [ -7.918, -2.338, 2.662 ] }, { "index": 443, "ntaa": "A-his", "nt": "///A/474", "aa": "///U/44", "trs_dist": -8.939, "rot_dist": -89.459, "six_params": [ -4.072, 7.766, 1.740, -84.210, -7.027, -32.608 ], "C_alpha": [ -1.910, 7.662, -4.133 ] }, { "index": 444, "ntaa": "A-ile", "nt": "///A/474", "aa": "///U/57", "trs_dist": -8.534, "rot_dist": 145.758, "six_params": [ 4.754, 4.953, -5.070, 38.540, 61.708, 137.106 ], "C_alpha": [ -5.492, 4.274, -4.924 ] }, { "index": 445, "ntaa": "C-asn", "nt": "///A/477", "aa": "///S/57", "trs_dist": 8.992, "rot_dist": 126.026, "six_params": [ -2.482, 6.574, -5.611, 61.075, 62.382, 102.318 ], "C_alpha": [ -8.775, 1.936, 0.343 ] }, { "index": 446, "ntaa": "C-ser", "nt": "///A/478", "aa": "///S/53", "trs_dist": -8.167, "rot_dist": 109.575, "six_params": [ -0.927, 7.720, -2.500, 14.872, 49.894, 100.161 ], "C_alpha": [ -7.172, 3.808, -0.885 ] }, { "index": 447, "ntaa": "G-lys", "nt": "///A/480", "aa": "///S/49", "trs_dist": 10.995, "rot_dist": -133.013, "six_params": [ -2.474, 10.303, 2.934, 0.935, 46.671, -128.535 ], "C_alpha": [ 8.777, 5.440, 3.762 ] }, { "index": 448, "ntaa": "G-lys", "nt": "///A/482", "aa": "///S/49", "trs_dist": 8.590, "rot_dist": 179.646, "six_params": [ -2.610, -8.178, 0.324, -17.300, -25.439, 179.633 ], "C_alpha": [ 8.065, -2.776, 0.967 ] }, { "index": 449, "ntaa": "A-leu", "nt": "///A/483", "aa": "///S/7", "trs_dist": 6.830, "rot_dist": -152.719, "six_params": [ 0.805, -0.947, 6.716, 81.552, 1.367, -143.707 ], "C_alpha": [ -4.567, -2.419, 4.421 ] }, { "index": 450, "ntaa": "A-lys", "nt": "///A/483", "aa": "///S/49", "trs_dist": -6.668, "rot_dist": 124.676, "six_params": [ -5.576, -2.433, -2.728, -26.947, -15.956, 122.348 ], "C_alpha": [ 0.206, -6.028, -2.822 ] }, { "index": 451, "ntaa": "G-ser", "nt": "///A/484", "aa": "///S/53", "trs_dist": 8.691, "rot_dist": 83.508, "six_params": [ -8.102, 0.968, 2.993, -42.250, -17.686, 71.839 ], "C_alpha": [ -7.856, -3.524, 1.189 ] }, { "index": 452, "ntaa": "G-asn", "nt": "///A/485", "aa": "///S/57", "trs_dist": 9.165, "rot_dist": 95.524, "six_params": [ -5.931, 1.436, 6.838, -49.289, -50.739, 68.954 ], "C_alpha": [ -8.650, -1.665, 2.532 ] }, { "index": 453, "ntaa": "G-asn", "nt": "///A/486", "aa": "///S/61", "trs_dist": 9.537, "rot_dist": 94.464, "six_params": [ -6.269, 2.091, 6.876, -81.734, -32.518, 38.640 ], "C_alpha": [ -8.962, 2.609, 1.983 ] }, { "index": 454, "ntaa": "G-his", "nt": "///A/489", "aa": "///U/44", "trs_dist": -9.925, "rot_dist": -174.075, "six_params": [ -2.827, -9.460, -1.019, -11.807, -71.955, -172.631 ], "C_alpha": [ -9.693, 1.389, -1.572 ] }, { "index": 455, "ntaa": "A-arg", "nt": "///A/499", "aa": "///S/80", "trs_dist": -5.435, "rot_dist": -134.089, "six_params": [ 0.963, -4.237, -3.265, 68.553, -56.749, -113.706 ], "C_alpha": [ 0.004, -3.464, -4.182 ] }, { "index": 456, "ntaa": "C-glu", "nt": "///A/507", "aa": "///S/78", "trs_dist": 9.234, "rot_dist": -99.222, "six_params": [ -2.276, -7.645, 4.652, 19.430, -34.486, -92.953 ], "C_alpha": [ -8.288, -3.243, 2.435 ] }, { "index": 457, "ntaa": "A-arg", "nt": "///A/519", "aa": "///J/116", "trs_dist": -11.923, "rot_dist": 51.679, "six_params": [ 9.983, 6.007, -2.536, 37.886, 9.743, 34.457 ], "C_alpha": [ 7.404, 9.263, -1.273 ] }, { "index": 458, "ntaa": "C-arg", "nt": "///A/522", "aa": "///Q/28", "trs_dist": -12.878, "rot_dist": -126.995, "six_params": [ -4.662, -8.589, -8.387, -41.187, 61.142, -112.203 ], "C_alpha": [ -12.780, 0.320, -1.526 ] }, { "index": 459, "ntaa": "A-arg", "nt": "///A/523", "aa": "///Q/28", "trs_dist": -11.638, "rot_dist": -124.280, "six_params": [ -4.488, -8.076, -7.077, 25.446, 58.411, -113.240 ], "C_alpha": [ -9.816, 2.850, -5.549 ] }, { "index": 460, "ntaa": "G-tyr", "nt": "///A/524", "aa": "///Q/45", "trs_dist": 8.952, "rot_dist": 44.712, "six_params": [ -8.052, 2.603, 2.921, -31.965, 10.666, 29.826 ], "C_alpha": [ -8.393, 1.293, 2.814 ] }, { "index": 461, "ntaa": "G-arg", "nt": "///A/524", "aa": "///Q/48", "trs_dist": 12.078, "rot_dist": 72.315, "six_params": [ -11.501, -2.694, -2.520, -13.597, 70.889, 4.714 ], "C_alpha": [ -10.618, -2.994, 4.912 ] }, { "index": 462, "ntaa": "U-asp", "nt": "///A/525", "aa": "///Q/49", "trs_dist": 10.261, "rot_dist": 54.964, "six_params": [ -8.737, 3.194, 4.330, -53.727, 8.406, 8.308 ], "C_alpha": [ -8.800, 4.340, 3.033 ] }, { "index": 463, "ntaa": "G-gln", "nt": "///A/526", "aa": "///Q/56", "trs_dist": -10.652, "rot_dist": 22.130, "six_params": [ -10.363, 2.461, 0.114, -21.980, -1.877, 1.771 ], "C_alpha": [ -10.397, 2.273, -0.522 ] }, { "index": 464, "ntaa": "G-his", "nt": "///A/527", "aa": "///J/47", "trs_dist": -7.595, "rot_dist": 39.462, "six_params": [ -7.584, 0.103, 0.391, 6.852, -22.214, 32.110 ], "C_alpha": [ -7.265, -1.957, -1.052 ] }, { "index": 465, "ntaa": "U-gly", "nt": "///A/539", "aa": "///R/17", "trs_dist": -7.258, "rot_dist": 111.258, "six_params": [ 1.518, -0.316, -7.090, -72.509, -24.786, 87.970 ], "C_alpha": [ 5.036, -1.112, -5.070 ] }, { "index": 466, "ntaa": "U-glu", "nt": "///A/539", "aa": "///R/18", "trs_dist": -3.640, "rot_dist": -144.224, "six_params": [ 2.946, 1.858, -1.057, -9.281, 52.421, -139.810 ], "C_alpha": [ 2.351, -1.426, -2.395 ] }, { "index": 467, "ntaa": "U-phe", "nt": "///A/539", "aa": "///R/19", "trs_dist": 2.923, "rot_dist": -103.487, "six_params": [ 1.141, -0.211, 2.683, -33.632, 79.038, -64.461 ], "C_alpha": [ 2.419, -1.029, 1.313 ] }, { "index": 468, "ntaa": "A-val", "nt": "///A/546", "aa": "///J/48", "trs_dist": 6.448, "rot_dist": -116.027, "six_params": [ -1.488, -2.304, 5.835, 57.385, 58.273, -91.026 ], "C_alpha": [ -2.680, -4.243, 4.027 ] }, { "index": 469, "ntaa": "C-his", "nt": "///A/547", "aa": "///J/47", "trs_dist": 8.004, "rot_dist": 139.554, "six_params": [ 0.299, 7.994, -0.252, 29.345, -8.266, 138.011 ], "C_alpha": [ -7.199, 3.018, 1.783 ] }, { "index": 470, "ntaa": "G-asp", "nt": "///A/549", "aa": "///Q/49", "trs_dist": -7.570, "rot_dist": -170.896, "six_params": [ 3.206, -6.322, -2.657, -6.760, -41.344, -170.250 ], "C_alpha": [ -6.080, -4.416, -0.994 ] }, { "index": 471, "ntaa": "G-gln", "nt": "///A/549", "aa": "///Q/52", "trs_dist": -9.248, "rot_dist": -178.918, "six_params": [ 0.887, -8.984, 2.010, 39.938, -10.792, -178.844 ], "C_alpha": [ -9.130, -0.946, -1.105 ] }, { "index": 472, "ntaa": "G-gln", "nt": "///A/549", "aa": "///Q/56", "trs_dist": -10.689, "rot_dist": 155.894, "six_params": [ 3.136, 9.553, -3.627, -1.339, 15.778, 155.659 ], "C_alpha": [ -8.751, 4.537, -4.140 ] }, { "index": 473, "ntaa": "C-arg", "nt": "///A/550", "aa": "///Q/48", "trs_dist": -11.818, "rot_dist": 172.546, "six_params": [ 2.225, 10.949, 3.850, -55.592, 10.820, 171.531 ], "C_alpha": [ -11.223, 3.163, -1.907 ] }, { "index": 474, "ntaa": "A-gln", "nt": "///A/553", "aa": "///Q/37", "trs_dist": 10.181, "rot_dist": 161.122, "six_params": [ 1.981, 9.974, -0.486, 23.014, -21.328, 160.384 ], "C_alpha": [ -9.371, 3.496, 1.874 ] }, { "index": 475, "ntaa": "C-gln", "nt": "///A/554", "aa": "///Q/37", "trs_dist": -11.946, "rot_dist": 129.804, "six_params": [ 5.545, 9.160, -5.297, 2.996, -22.918, 128.691 ], "C_alpha": [ -5.566, 9.839, -3.849 ] }, { "index": 476, "ntaa": "U-arg", "nt": "///A/556", "aa": "///R/80", "trs_dist": 9.310, "rot_dist": -93.829, "six_params": [ -1.079, 8.745, 3.005, -22.387, 12.146, -91.095 ], "C_alpha": [ 5.961, 7.031, 1.367 ] }, { "index": 477, "ntaa": "U-arg", "nt": "///A/557", "aa": "///R/80", "trs_dist": -8.140, "rot_dist": -137.936, "six_params": [ 1.123, 7.997, -1.028, -18.941, 14.164, -136.979 ], "C_alpha": [ 7.509, 1.982, -2.440 ] }, { "index": 478, "ntaa": "U-lys", "nt": "///A/558", "aa": "///R/81", "trs_dist": -8.968, "rot_dist": 142.908, "six_params": [ 3.606, -5.241, -6.321, -74.012, -13.696, 132.638 ], "C_alpha": [ 8.834, 0.580, -1.475 ] }, { "index": 479, "ntaa": "G-gln", "nt": "///A/568", "aa": "///Q/37", "trs_dist": 10.707, "rot_dist": 41.242, "six_params": [ -8.989, -5.227, 2.554, 24.628, -4.055, 33.097 ], "C_alpha": [ -7.076, -7.960, 1.062 ] }, { "index": 480, "ntaa": "C-arg", "nt": "///A/574", "aa": "///Q/6", "trs_dist": 12.880, "rot_dist": 100.823, "six_params": [ 10.469, 4.274, 6.167, -25.594, 29.448, 94.924 ], "C_alpha": [ 3.974, 12.036, 2.230 ] }, { "index": 481, "ntaa": "G-arg", "nt": "///A/575", "aa": "///Q/6", "trs_dist": 11.746, "rot_dist": 46.953, "six_params": [ 10.468, 3.040, 4.376, -23.697, 23.492, 33.516 ], "C_alpha": [ 9.545, 6.671, 1.448 ] }, { "index": 482, "ntaa": "C-pro", "nt": "///A/577", "aa": "///L/19", "trs_dist": 7.117, "rot_dist": 59.186, "six_params": [ 3.784, 4.338, 4.185, 18.807, -19.430, 53.153 ], "C_alpha": [ 1.110, 4.486, 5.419 ] }, { "index": 483, "ntaa": "C-thr", "nt": "///A/577", "aa": "///L/30", "trs_dist": 5.358, "rot_dist": -90.282, "six_params": [ 4.908, 2.051, 0.644, 19.073, -38.979, -81.221 ], "C_alpha": [ 4.461, -1.484, 2.575 ] }, { "index": 484, "ntaa": "C-arg", "nt": "///A/577", "aa": "///L/33", "trs_dist": 5.565, "rot_dist": -97.030, "six_params": [ 3.069, -4.580, 0.758, 3.008, -84.593, -52.740 ], "C_alpha": [ -0.430, -4.943, 2.521 ] }, { "index": 485, "ntaa": "U-phe", "nt": "///A/578", "aa": "///E/84", "trs_dist": -8.093, "rot_dist": 85.014, "six_params": [ -5.319, 5.808, 1.862, -65.044, -40.658, 39.880 ], "C_alpha": [ -6.562, 3.342, -3.355 ] }, { "index": 486, "ntaa": "U-lys", "nt": "///A/581", "aa": "///5/3", "trs_dist": 7.506, "rot_dist": 67.933, "six_params": [ -7.150, 1.384, -1.818, 41.874, 53.114, 6.763 ], "C_alpha": [ -7.142, 0.915, 2.087 ] }, { "index": 487, "ntaa": "A-met", "nt": "///A/582", "aa": "///5/4", "trs_dist": -9.110, "rot_dist": -73.931, "six_params": [ -8.631, 1.543, 2.471, -17.996, -60.450, -40.745 ], "C_alpha": [ -7.555, 4.433, -2.440 ] }, { "index": 488, "ntaa": "U-arg", "nt": "///A/583", "aa": "///5/64", "trs_dist": 8.390, "rot_dist": 51.509, "six_params": [ -5.412, 6.112, 1.934, -6.650, -25.768, 44.509 ], "C_alpha": [ -7.593, 3.570, 0.323 ] }, { "index": 489, "ntaa": "G-ala", "nt": "///A/587", "aa": "///L/12", "trs_dist": 7.369, "rot_dist": 86.396, "six_params": [ -5.258, 5.020, -1.210, 3.550, 64.060, 61.287 ], "C_alpha": [ -6.910, 1.729, 1.913 ] }, { "index": 490, "ntaa": "G-met", "nt": "///A/589", "aa": "///E/99", "trs_dist": 10.272, "rot_dist": 177.179, "six_params": [ 0.248, 10.135, -1.658, 60.434, 13.636, 176.710 ], "C_alpha": [ -9.588, 0.645, 3.638 ] }, { "index": 491, "ntaa": "U-ala", "nt": "///A/605", "aa": "///E/33", "trs_dist": 6.533, "rot_dist": 165.515, "six_params": [ -4.080, 5.064, -0.617, 22.844, 61.930, 162.708 ], "C_alpha": [ -5.347, -2.774, 2.529 ] }, { "index": 492, "ntaa": "U-tyr", "nt": "///A/605", "aa": "///E/34", "trs_dist": 3.971, "rot_dist": 123.957, "six_params": [ -1.559, 3.469, 1.139, 80.265, -10.289, 103.736 ], "C_alpha": [ -2.628, -0.162, 2.979 ] }, { "index": 493, "ntaa": "U-gly", "nt": "///A/605", "aa": "///E/37", "trs_dist": -3.242, "rot_dist": 154.794, "six_params": [ -0.179, 0.736, -3.153, 47.912, 52.779, 148.852 ], "C_alpha": [ -2.186, -0.896, -2.191 ] }, { "index": 494, "ntaa": "U-gly", "nt": "///A/605", "aa": "///E/38", "trs_dist": -3.010, "rot_dist": 157.702, "six_params": [ 1.887, -0.329, -2.322, -48.726, 65.459, 150.400 ], "C_alpha": [ 1.474, 0.006, -2.630 ] }, { "index": 495, "ntaa": "A-gln", "nt": "///A/606", "aa": "///E/172", "trs_dist": -7.508, "rot_dist": 119.386, "six_params": [ -0.328, 7.484, -0.503, -23.008, 4.197, 117.961 ], "C_alpha": [ -6.391, 3.399, -1.983 ] }, { "index": 496, "ntaa": "G-lys", "nt": "///A/609", "aa": "///E/97", "trs_dist": -9.253, "rot_dist": 138.564, "six_params": [ 2.873, -8.638, 1.662, 32.094, 36.030, 134.386 ], "C_alpha": [ 9.065, -0.700, -1.704 ] }, { "index": 497, "ntaa": "U-lys", "nt": "///A/610", "aa": "///E/97", "trs_dist": -8.164, "rot_dist": 103.723, "six_params": [ 0.721, -8.036, -1.247, -7.646, -11.160, 103.091 ], "C_alpha": [ 6.844, -4.396, -0.630 ] }, { "index": 498, "ntaa": "U-arg", "nt": "///A/616", "aa": "///L/78", "trs_dist": 6.209, "rot_dist": -100.440, "six_params": [ -1.492, -5.046, 3.297, -55.684, 3.695, -87.226 ], "C_alpha": [ -2.994, -1.167, 5.316 ] }, { "index": 499, "ntaa": "U-glu", "nt": "///A/616", "aa": "///L/81", "trs_dist": 7.006, "rot_dist": 53.358, "six_params": [ -6.455, -2.333, 1.405, 49.612, 17.360, 9.526 ], "C_alpha": [ -5.987, -3.425, 1.241 ] }, { "index": 500, "ntaa": "A-met", "nt": "///A/617", "aa": "///L/111", "trs_dist": 6.360, "rot_dist": 68.867, "six_params": [ 4.675, 2.921, 3.172, 65.143, -21.650, 5.876 ], "C_alpha": [ 3.833, 0.717, 5.015 ] }, { "index": 501, "ntaa": "A-leu", "nt": "///A/617", "aa": "///L/112", "trs_dist": 6.392, "rot_dist": 128.146, "six_params": [ 3.887, -3.226, 3.917, 50.807, 6.807, 121.982 ], "C_alpha": [ 5.951, 1.343, 1.919 ] }, { "index": 502, "ntaa": "A-ser", "nt": "///A/617", "aa": "///L/113", "trs_dist": 7.505, "rot_dist": 162.960, "six_params": [ 4.758, -3.613, 4.542, 46.984, 45.746, 159.700 ], "C_alpha": [ 5.650, 4.904, 0.634 ] }, { "index": 503, "ntaa": "A-phe", "nt": "///A/621", "aa": "///L/66", "trs_dist": -9.913, "rot_dist": -93.998, "six_params": [ -9.147, -2.899, -2.492, -14.680, 25.278, -90.370 ], "C_alpha": [ -8.826, 4.509, -0.059 ] }, { "index": 504, "ntaa": "G-arg", "nt": "///A/624", "aa": "///L/74", "trs_dist": 11.859, "rot_dist": 86.533, "six_params": [ 10.859, 4.478, 1.633, -73.621, -44.464, 10.626 ], "C_alpha": [ 9.442, 6.752, 2.412 ] }, { "index": 505, "ntaa": "C-arg", "nt": "///A/625", "aa": "///L/74", "trs_dist": 10.838, "rot_dist": -156.844, "six_params": [ 2.030, 10.636, -0.473, 23.828, 81.938, -148.320 ], "C_alpha": [ 10.783, 1.012, 0.345 ] }, { "index": 506, "ntaa": "G-glu", "nt": "///A/626", "aa": "///L/76", "trs_dist": 5.759, "rot_dist": 164.459, "six_params": [ -1.173, -5.293, 1.943, -44.589, -54.616, 160.940 ], "C_alpha": [ 3.832, -3.059, 2.990 ] }, { "index": 507, "ntaa": "G-lys", "nt": "///A/626", "aa": "///L/109", "trs_dist": 7.103, "rot_dist": 178.818, "six_params": [ 1.906, -6.840, -0.173, -53.156, -47.713, 178.544 ], "C_alpha": [ 6.040, 1.100, 3.562 ] }, { "index": 508, "ntaa": "G-met", "nt": "///A/626", "aa": "///L/111", "trs_dist": 6.474, "rot_dist": -143.772, "six_params": [ -3.751, 3.160, 4.226, 48.527, 30.218, -138.529 ], "C_alpha": [ 0.055, 2.566, 5.930 ] }, { "index": 509, "ntaa": "G-thr", "nt": "///A/626", "aa": "///L/128", "trs_dist": 8.892, "rot_dist": -158.667, "six_params": [ -5.510, 4.826, 5.043, 19.295, -25.434, -157.801 ], "C_alpha": [ 2.674, 7.215, 4.435 ] }, { "index": 510, "ntaa": "A-arg", "nt": "///A/633", "aa": "///3/40", "trs_dist": -10.230, "rot_dist": 40.531, "six_params": [ 5.153, 6.841, -5.596, -5.077, 30.312, 26.748 ], "C_alpha": [ 1.836, 7.185, -7.050 ] }, { "index": 511, "ntaa": "C-asn", "nt": "///A/648", "aa": "///E/96", "trs_dist": 9.890, "rot_dist": -169.056, "six_params": [ -3.387, -9.291, -0.112, -48.025, -56.431, -166.275 ], "C_alpha": [ -9.271, 2.775, 1.986 ] }, { "index": 512, "ntaa": "G-gln", "nt": "///A/649", "aa": "///E/29", "trs_dist": 9.712, "rot_dist": -174.945, "six_params": [ 0.965, -9.652, -0.469, -32.778, 32.995, -174.498 ], "C_alpha": [ -9.363, -1.633, 1.981 ] }, { "index": 513, "ntaa": "G-met", "nt": "///A/649", "aa": "///E/99", "trs_dist": -11.193, "rot_dist": -52.690, "six_params": [ -10.275, 4.304, -1.091, -19.411, -48.431, -7.611 ], "C_alpha": [ -8.515, 4.277, -5.877 ] }, { "index": 514, "ntaa": "U-ala", "nt": "///A/651", "aa": "///L/12", "trs_dist": -7.989, "rot_dist": 114.050, "six_params": [ -1.762, 7.769, -0.602, -54.035, 27.730, 101.778 ], "C_alpha": [ -6.686, 2.493, -3.608 ] }, { "index": 515, "ntaa": "G-arg", "nt": "///A/654", "aa": "///5/64", "trs_dist": -5.891, "rot_dist": 141.393, "six_params": [ -4.856, 2.859, -1.718, 32.637, 7.315, 139.615 ], "C_alpha": [ -4.696, -3.526, -0.535 ] }, { "index": 516, "ntaa": "U-met", "nt": "///A/655", "aa": "///5/4", "trs_dist": 8.623, "rot_dist": -150.209, "six_params": [ 1.397, -8.157, -2.421, -70.663, -16.590, -142.804 ], "C_alpha": [ -7.138, -3.816, 2.925 ] }, { "index": 517, "ntaa": "U-arg", "nt": "///A/655", "aa": "///5/64", "trs_dist": -8.490, "rot_dist": 98.625, "six_params": [ -2.261, 5.947, -5.622, 30.048, -2.839, 95.058 ], "C_alpha": [ -6.768, 3.293, -3.940 ] }, { "index": 518, "ntaa": "A-lys", "nt": "///A/656", "aa": "///5/3", "trs_dist": 7.281, "rot_dist": 166.050, "six_params": [ -1.846, 6.491, 2.734, -29.260, -50.680, 163.997 ], "C_alpha": [ -7.117, -1.493, 0.017 ] }, { "index": 519, "ntaa": "A-met", "nt": "///A/656", "aa": "///5/4", "trs_dist": -8.010, "rot_dist": -174.376, "six_params": [ -2.409, -5.534, -5.266, -65.923, 1.183, -173.296 ], "C_alpha": [ -7.616, 2.017, -1.395 ] }, { "index": 520, "ntaa": "U-lys", "nt": "///A/657", "aa": "///5/3", "trs_dist": -9.044, "rot_dist": 148.250, "six_params": [ 0.037, 9.024, -0.605, -53.935, -26.638, 143.145 ], "C_alpha": [ -7.165, 3.071, -4.567 ] }, { "index": 521, "ntaa": "G-phe", "nt": "///A/659", "aa": "///E/84", "trs_dist": -5.966, "rot_dist": 96.319, "six_params": [ -4.200, -1.098, -4.093, -76.420, 5.739, 63.532 ], "C_alpha": [ -1.983, -5.133, -2.337 ] }, { "index": 522, "ntaa": "C-arg", "nt": "///A/661", "aa": "///L/33", "trs_dist": -9.345, "rot_dist": 141.768, "six_params": [ 1.030, -6.770, -6.359, 50.099, -73.539, 125.345 ], "C_alpha": [ 5.842, 3.065, -6.616 ] }, { "index": 523, "ntaa": "C-ser", "nt": "///A/661", "aa": "///L/40", "trs_dist": -7.509, "rot_dist": -70.416, "six_params": [ 3.931, 6.048, -2.085, 14.074, -1.570, -69.158 ], "C_alpha": [ 6.811, 2.911, -1.275 ] }, { "index": 524, "ntaa": "C-arg", "nt": "///A/661", "aa": "///L/41", "trs_dist": 6.471, "rot_dist": -98.754, "six_params": [ 3.055, 3.626, 4.403, -73.295, -28.329, -65.458 ], "C_alpha": [ 4.986, 3.615, 1.980 ] }, { "index": 525, "ntaa": "C-ser", "nt": "///A/661", "aa": "///L/42", "trs_dist": 7.630, "rot_dist": -167.656, "six_params": [ -5.754, 2.122, 4.539, -36.158, -3.850, -167.004 ], "C_alpha": [ 2.695, 6.237, 3.467 ] }, { "index": 526, "ntaa": "C-ser", "nt": "///A/662", "aa": "///L/42", "trs_dist": -8.463, "rot_dist": 166.804, "six_params": [ 6.448, -5.361, 1.144, 34.366, -2.974, 166.180 ], "C_alpha": [ 6.209, 5.738, -0.323 ] }, { "index": 527, "ntaa": "G-arg", "nt": "///A/664", "aa": "///E/68", "trs_dist": -11.557, "rot_dist": 122.168, "six_params": [ 3.483, 10.835, 2.007, -43.681, -41.395, 112.050 ], "C_alpha": [ -7.308, 8.893, -0.992 ] }, { "index": 528, "ntaa": "U-phe", "nt": "///A/676", "aa": "///4/5", "trs_dist": 8.589, "rot_dist": -44.871, "six_params": [ -0.619, 7.658, 3.840, 36.601, -25.408, -5.451 ], "C_alpha": [ -1.398, 6.166, 5.812 ] }, { "index": 529, "ntaa": "U-gln", "nt": "///A/676", "aa": "///4/6", "trs_dist": 7.096, "rot_dist": -23.705, "six_params": [ -3.393, 2.553, 5.685, -7.894, -17.554, -13.903 ], "C_alpha": [ -3.841, 3.406, 4.919 ] }, { "index": 530, "ntaa": "U-pro", "nt": "///A/676", "aa": "///4/7", "trs_dist": 4.275, "rot_dist": 116.668, "six_params": [ -3.282, 1.611, 2.214, 1.446, 82.693, 91.251 ], "C_alpha": [ -1.811, 0.391, 3.807 ] }, { "index": 531, "ntaa": "U-ser", "nt": "///A/676", "aa": "///4/8", "trs_dist": 2.826, "rot_dist": -64.147, "six_params": [ -1.000, -1.839, 1.899, 26.691, -55.344, -19.399 ], "C_alpha": [ -2.020, -1.843, 0.751 ] }, { "index": 532, "ntaa": "U-lys", "nt": "///A/676", "aa": "///4/11", "trs_dist": -4.787, "rot_dist": 147.419, "six_params": [ 0.437, -0.800, -4.700, 41.131, 13.089, 144.886 ], "C_alpha": [ -0.898, 0.167, -4.701 ] }, { "index": 533, "ntaa": "U-arg", "nt": "///A/676", "aa": "///4/12", "trs_dist": -4.137, "rot_dist": 125.232, "six_params": [ 2.480, -0.686, -3.239, -50.449, 35.650, 115.182 ], "C_alpha": [ 2.593, 0.074, -3.224 ] }, { "index": 534, "ntaa": "U-arg", "nt": "///A/680", "aa": "///C/43", "trs_dist": 10.911, "rot_dist": 40.093, "six_params": [ -9.739, -1.384, 4.721, 39.247, 6.479, 5.124 ], "C_alpha": [ -9.324, -3.402, 4.507 ] }, { "index": 535, "ntaa": "A-gln", "nt": "///A/705", "aa": "///o/40", "trs_dist": 10.418, "rot_dist": 81.584, "six_params": [ 4.041, 7.926, -5.421, 63.879, -50.715, 2.031 ], "C_alpha": [ 4.768, 9.141, 1.594 ] }, { "index": 536, "ntaa": "A-arg", "nt": "///A/705", "aa": "///o/53", "trs_dist": 7.878, "rot_dist": -101.287, "six_params": [ 3.316, 5.888, 4.049, 61.470, 19.226, -82.917 ], "C_alpha": [ 5.211, -0.396, 5.887 ] }, { "index": 537, "ntaa": "A-leu", "nt": "///A/705", "aa": "///o/56", "trs_dist": 7.670, "rot_dist": -142.902, "six_params": [ 0.674, -1.111, 7.559, -39.527, -40.386, -137.659 ], "C_alpha": [ 0.674, 2.397, 7.249 ] }, { "index": 538, "ntaa": "A-val", "nt": "///A/705", "aa": "///o/60", "trs_dist": 8.314, "rot_dist": -104.615, "six_params": [ -7.200, 2.316, 3.453, 78.030, 23.349, -72.435 ], "C_alpha": [ -5.542, 3.012, 5.401 ] }, { "index": 539, "ntaa": "A-thr", "nt": "///A/717", "aa": "///C/9", "trs_dist": 6.586, "rot_dist": 74.221, "six_params": [ -6.374, -0.291, 1.634, -34.095, 2.730, 66.899 ], "C_alpha": [ -5.402, -3.297, 1.799 ] }, { "index": 540, "ntaa": "G-thr", "nt": "///A/718", "aa": "///C/9", "trs_dist": -8.672, "rot_dist": 54.162, "six_params": [ -7.473, 3.759, -2.285, -49.655, 9.005, 20.345 ], "C_alpha": [ -8.013, 1.184, -3.072 ] }, { "index": 541, "ntaa": "G-ser", "nt": "///A/718", "aa": "///C/10", "trs_dist": 9.381, "rot_dist": -136.553, "six_params": [ -5.621, -6.331, -4.042, -5.987, 66.468, -127.385 ], "C_alpha": [ -8.785, 3.267, 0.027 ] }, { "index": 542, "ntaa": "G-ala", "nt": "///A/719", "aa": "///C/11", "trs_dist": 5.928, "rot_dist": 104.080, "six_params": [ -2.449, 1.788, 5.093, 40.959, -75.896, 65.142 ], "C_alpha": [ -4.548, -2.535, 2.826 ] }, { "index": 543, "ntaa": "G-gly", "nt": "///A/719", "aa": "///C/12", "trs_dist": 4.904, "rot_dist": 99.913, "six_params": [ -0.930, 0.516, 4.787, -30.095, -12.859, 95.784 ], "C_alpha": [ -2.256, 0.078, 4.361 ] }, { "index": 544, "ntaa": "G-lys", "nt": "///A/719", "aa": "///C/207", "trs_dist": 4.616, "rot_dist": 158.568, "six_params": [ -1.042, -1.853, 4.097, 15.370, 86.563, 150.061 ], "C_alpha": [ 2.797, 1.276, 3.433 ] }, { "index": 545, "ntaa": "G-ala", "nt": "///A/719", "aa": "///C/208", "trs_dist": 5.632, "rot_dist": 132.309, "six_params": [ 5.206, -1.932, 0.944, 78.153, -27.406, 114.765 ], "C_alpha": [ 4.799, 2.870, 0.642 ] }, { "index": 546, "ntaa": "G-gly", "nt": "///A/719", "aa": "///C/209", "trs_dist": 7.299, "rot_dist": 166.146, "six_params": [ 6.767, -2.670, 0.602, -8.859, -6.334, 166.082 ], "C_alpha": [ 3.408, 6.338, 1.204 ] }, { "index": 547, "ntaa": "U-arg", "nt": "///A/737", "aa": "///S/88", "trs_dist": -12.129, "rot_dist": 139.724, "six_params": [ 1.864, 11.851, -1.785, -6.080, -51.581, 134.967 ], "C_alpha": [ -9.852, 6.893, -1.403 ] }, { "index": 548, "ntaa": "U-arg", "nt": "///A/737", "aa": "///S/92", "trs_dist": -13.672, "rot_dist": -35.534, "six_params": [ -10.302, 5.692, -6.957, 27.709, -11.561, -19.229 ], "C_alpha": [ -8.264, 8.819, -6.389 ] }, { "index": 549, "ntaa": "G-ala", "nt": "///A/738", "aa": "///S/89", "trs_dist": -7.997, "rot_dist": 44.070, "six_params": [ 3.721, 6.937, -1.409, -30.045, 25.127, 20.610 ], "C_alpha": [ 1.961, 6.696, -3.913 ] }, { "index": 550, "ntaa": "G-lys", "nt": "///A/738", "aa": "///S/90", "trs_dist": -6.584, "rot_dist": 46.995, "six_params": [ 3.503, 0.941, -5.495, 22.299, -16.405, 38.355 ], "C_alpha": [ 3.348, 3.222, -4.680 ] }, { "index": 551, "ntaa": "A-lys", "nt": "///A/741", "aa": "///S/90", "trs_dist": 7.281, "rot_dist": 101.176, "six_params": [ -0.767, 7.165, 1.036, 38.286, -13.469, 94.795 ], "C_alpha": [ -5.436, 3.613, 3.256 ] }, { "index": 552, "ntaa": "A-gly", "nt": "///A/741", "aa": "///S/91", "trs_dist": 4.616, "rot_dist": 28.059, "six_params": [ -3.117, 1.113, 3.218, -4.087, -0.439, 27.762 ], "C_alpha": [ -3.357, 0.444, 3.187 ] }, { "index": 553, "ntaa": "A-ala", "nt": "///A/754", "aa": "///C/208", "trs_dist": -5.595, "rot_dist": -86.193, "six_params": [ -2.301, 4.119, -3.007, -42.141, -53.774, -56.121 ], "C_alpha": [ 0.897, 2.488, -4.932 ] }, { "index": 554, "ntaa": "A-arg", "nt": "///A/754", "aa": "///C/212", "trs_dist": -8.720, "rot_dist": -127.599, "six_params": [ -3.241, -5.167, -6.231, 36.364, 63.015, -113.488 ], "C_alpha": [ -6.300, 3.536, -4.892 ] }, { "index": 555, "ntaa": "A-pro", "nt": "///A/754", "aa": "///C/218", "trs_dist": -6.349, "rot_dist": 60.697, "six_params": [ -5.866, -2.054, 1.293, 25.391, -42.559, 36.215 ], "C_alpha": [ -4.928, -3.800, -1.400 ] }, { "index": 556, "ntaa": "G-asp", "nt": "///A/770", "aa": "///C/229", "trs_dist": 5.130, "rot_dist": 137.796, "six_params": [ -2.959, -3.171, 2.739, 16.983, -10.336, 137.122 ], "C_alpha": [ 2.115, -4.241, 1.967 ] }, { "index": 557, "ntaa": "A-arg", "nt": "///A/771", "aa": "///C/212", "trs_dist": -9.651, "rot_dist": 119.192, "six_params": [ 4.802, 2.871, -7.863, -72.996, 26.070, 99.068 ], "C_alpha": [ 3.859, 0.409, -8.842 ] }, { "index": 558, "ntaa": "A-val", "nt": "///A/772", "aa": "///C/220", "trs_dist": 7.202, "rot_dist": -123.437, "six_params": [ 0.501, -1.620, 7.000, -77.999, -36.894, -99.015 ], "C_alpha": [ 1.222, 3.356, 6.242 ] }, { "index": 559, "ntaa": "A-met", "nt": "///A/772", "aa": "///C/225", "trs_dist": 7.226, "rot_dist": -90.884, "six_params": [ -5.489, 1.139, 4.558, 65.357, -37.928, -54.815 ], "C_alpha": [ -6.378, 2.230, 2.513 ] }, { "index": 560, "ntaa": "A-asp", "nt": "///A/772", "aa": "///C/229", "trs_dist": -6.829, "rot_dist": 66.874, "six_params": [ -6.824, 0.197, 0.160, -9.789, -11.575, 65.329 ], "C_alpha": [ -5.828, -3.518, -0.544 ] }, { "index": 561, "ntaa": "G-asn", "nt": "///A/774", "aa": "///C/226", "trs_dist": 6.854, "rot_dist": 64.963, "six_params": [ -6.089, 2.621, 1.741, 26.328, 51.880, 30.264 ], "C_alpha": [ -4.918, 0.595, 4.729 ] }, { "index": 562, "ntaa": "G-pro", "nt": "///A/774", "aa": "///C/227", "trs_dist": 6.370, "rot_dist": 88.129, "six_params": [ -0.827, -1.032, 6.231, -7.709, -62.351, 65.305 ], "C_alpha": [ -2.949, -2.672, 4.989 ] }, { "index": 563, "ntaa": "G-val", "nt": "///A/774", "aa": "///C/228", "trs_dist": 4.894, "rot_dist": 96.485, "six_params": [ -0.984, -2.947, 3.781, -54.563, 18.601, 81.045 ], "C_alpha": [ 0.355, -0.813, 4.813 ] }, { "index": 564, "ntaa": "A-thr", "nt": "///A/778", "aa": "///4/4", "trs_dist": -7.107, "rot_dist": 83.748, "six_params": [ -3.962, 4.807, -3.421, 25.381, -24.238, 77.303 ], "C_alpha": [ -6.022, 2.265, -3.029 ] }, { "index": 565, "ntaa": "A-arg", "nt": "///A/779", "aa": "///4/3", "trs_dist": -8.195, "rot_dist": 155.289, "six_params": [ -0.360, 3.370, -7.461, -30.191, -29.023, 153.511 ], "C_alpha": [ -0.904, 1.863, -7.923 ] }, { "index": 566, "ntaa": "A-val", "nt": "///A/783", "aa": "///C/228", "trs_dist": -6.870, "rot_dist": -78.919, "six_params": [ 5.645, 1.362, -3.672, -42.758, 31.622, -60.601 ], "C_alpha": [ 3.601, -2.502, -5.278 ] }, { "index": 567, "ntaa": "G-thr", "nt": "///A/791", "aa": "///E/47", "trs_dist": -6.235, "rot_dist": -105.850, "six_params": [ 4.134, 2.176, -4.130, 56.174, 54.884, -77.719 ], "C_alpha": [ 4.309, 1.993, -4.035 ] }, { "index": 568, "ntaa": "G-arg", "nt": "///A/791", "aa": "///E/48", "trs_dist": -6.738, "rot_dist": -162.233, "six_params": [ -5.095, 2.043, -3.908, -2.229, -33.796, -161.420 ], "C_alpha": [ 1.331, 4.000, -5.248 ] }, { "index": 569, "ntaa": "G-ser", "nt": "///A/791", "aa": "///E/49", "trs_dist": -8.221, "rot_dist": 175.150, "six_params": [ 7.067, -4.031, -1.176, 89.645, -6.429, 173.147 ], "C_alpha": [ 2.615, 7.044, -3.323 ] }, { "index": 570, "ntaa": "G-thr", "nt": "///A/791", "aa": "///E/83", "trs_dist": -5.338, "rot_dist": -146.922, "six_params": [ 4.832, 0.222, -2.258, -10.020, 59.840, -141.484 ], "C_alpha": [ 0.950, -2.928, -4.373 ] }, { "index": 571, "ntaa": "C-arg", "nt": "///A/796", "aa": "///L/41", "trs_dist": 9.848, "rot_dist": -48.941, "six_params": [ 8.298, 5.303, 0.116, 10.094, -47.456, -6.626 ], "C_alpha": [ 7.724, 4.675, 3.885 ] }, { "index": 572, "ntaa": "U-arg", "nt": "///A/797", "aa": "///E/68", "trs_dist": -9.033, "rot_dist": 78.015, "six_params": [ -7.206, -3.229, -4.386, 39.371, 36.664, 58.770 ], "C_alpha": [ -6.324, -5.825, -2.772 ] }, { "index": 573, "ntaa": "U-arg", "nt": "///A/797", "aa": "///L/41", "trs_dist": 10.555, "rot_dist": -67.471, "six_params": [ 8.412, 5.872, -2.484, 1.957, -63.387, -24.343 ], "C_alpha": [ 9.470, 3.958, 2.389 ] }, { "index": 574, "ntaa": "U-lys", "nt": "///A/800", "aa": "///L/29", "trs_dist": 6.252, "rot_dist": 85.198, "six_params": [ 1.306, 5.976, 1.292, 72.301, 4.356, 48.324 ], "C_alpha": [ -0.364, 4.291, 4.531 ] }, { "index": 575, "ntaa": "U-thr", "nt": "///A/800", "aa": "///L/30", "trs_dist": 3.965, "rot_dist": -53.404, "six_params": [ 0.997, 1.885, 3.343, 39.376, -31.733, -17.757 ], "C_alpha": [ 0.067, 0.608, 3.931 ] }, { "index": 576, "ntaa": "U-gly", "nt": "///A/801", "aa": "///L/20", "trs_dist": 8.607, "rot_dist": 174.539, "six_params": [ 2.323, 1.167, 8.205, 45.174, 69.333, 172.720 ], "C_alpha": [ 2.008, 6.464, 5.308 ] }, { "index": 577, "ntaa": "U-arg", "nt": "///A/801", "aa": "///L/21", "trs_dist": 7.760, "rot_dist": -104.263, "six_params": [ -3.716, 2.486, 6.342, 2.992, -34.474, -99.976 ], "C_alpha": [ -1.706, 5.652, 5.016 ] }, { "index": 578, "ntaa": "C-arg", "nt": "///A/802", "aa": "///L/18", "trs_dist": -9.795, "rot_dist": 156.830, "six_params": [ 5.772, -7.111, -3.472, -39.531, 5.650, 155.326 ], "C_alpha": [ 8.944, 3.840, -1.155 ] }, { "index": 579, "ntaa": "C-arg", "nt": "///A/802", "aa": "///L/21", "trs_dist": 9.369, "rot_dist": -110.989, "six_params": [ -3.450, 8.295, -2.659, 42.805, 33.688, -100.844 ], "C_alpha": [ 4.251, 8.194, 1.580 ] }, { "index": 580, "ntaa": "C-ser", "nt": "///A/802", "aa": "///L/25", "trs_dist": 6.436, "rot_dist": 72.025, "six_params": [ 0.504, 0.472, 6.399, -10.335, 58.857, 42.221 ], "C_alpha": [ 2.967, 2.235, 5.265 ] }, { "index": 581, "ntaa": "U-gly", "nt": "///A/803", "aa": "///L/24", "trs_dist": 7.932, "rot_dist": -40.746, "six_params": [ 2.863, 5.790, 4.605, -30.671, -25.204, -9.369 ], "C_alpha": [ 2.549, 6.688, 3.417 ] }, { "index": 582, "ntaa": "U-ser", "nt": "///A/803", "aa": "///L/25", "trs_dist": 6.477, "rot_dist": 62.252, "six_params": [ 3.612, 3.245, 4.287, -7.208, 60.157, 15.031 ], "C_alpha": [ 4.731, 4.097, 1.702 ] }, { "index": 583, "ntaa": "C-gly", "nt": "///A/804", "aa": "///L/24", "trs_dist": -7.874, "rot_dist": -63.389, "six_params": [ 2.802, 7.137, 1.794, -42.333, -16.417, -45.465 ], "C_alpha": [ 5.366, 5.737, -0.533 ] }, { "index": 584, "ntaa": "C-ser", "nt": "///A/804", "aa": "///L/25", "trs_dist": -6.299, "rot_dist": -63.238, "six_params": [ 5.342, 3.285, 0.593, 6.662, 58.483, -24.230 ], "C_alpha": [ 5.592, 2.204, -1.905 ] }, { "index": 585, "ntaa": "A-glu", "nt": "///A/815", "aa": "///L/51", "trs_dist": -8.702, "rot_dist": 102.014, "six_params": [ -6.452, 4.877, -3.212, 14.808, 20.151, 99.742 ], "C_alpha": [ -8.378, -1.910, -1.379 ] }, { "index": 586, "ntaa": "U-gly", "nt": "///A/816", "aa": "///L/52", "trs_dist": -7.651, "rot_dist": 87.068, "six_params": [ -6.450, 3.554, -2.071, -79.090, 36.201, 4.350 ], "C_alpha": [ -7.180, 1.848, -1.879 ] }, { "index": 587, "ntaa": "G-gly", "nt": "///A/821", "aa": "///L/52", "trs_dist": 6.082, "rot_dist": 174.625, "six_params": [ -3.892, 4.253, 1.938, -23.574, 62.354, 173.566 ], "C_alpha": [ -4.889, -2.295, 2.793 ] }, { "index": 588, "ntaa": "U-glu", "nt": "///A/822", "aa": "///L/51", "trs_dist": 8.857, "rot_dist": 79.802, "six_params": [ -4.830, 6.244, 4.016, -20.759, -2.063, 77.471 ], "C_alpha": [ -8.108, 2.291, 2.733 ] }, { "index": 589, "ntaa": "U-gly", "nt": "///A/822", "aa": "///L/52", "trs_dist": -6.552, "rot_dist": 149.795, "six_params": [ 0.109, 6.549, 0.160, -10.499, 80.387, 139.902 ], "C_alpha": [ -6.140, 2.226, -0.501 ] }, { "index": 590, "ntaa": "A-glu", "nt": "///A/823", "aa": "///L/51", "trs_dist": -9.306, "rot_dist": 59.830, "six_params": [ -2.654, 8.912, -0.373, -28.709, -2.432, 53.008 ], "C_alpha": [ -6.155, 6.469, -2.632 ] }, { "index": 591, "ntaa": "C-gly", "nt": "///A/839", "aa": "///Z/25", "trs_dist": -6.744, "rot_dist": 56.648, "six_params": [ -5.927, 3.133, 0.724, 1.482, -44.110, 36.439 ], "C_alpha": [ -6.487, 1.172, -1.514 ] }, { "index": 592, "ntaa": "C-met", "nt": "///A/839", "aa": "///Z/46", "trs_dist": 10.436, "rot_dist": -130.636, "six_params": [ -7.210, 0.370, 7.535, 79.269, 1.371, -114.323 ], "C_alpha": [ -7.685, 3.513, 6.117 ] }, { "index": 593, "ntaa": "U-glu", "nt": "///A/840", "aa": "///Z/42", "trs_dist": 7.073, "rot_dist": 145.154, "six_params": [ -0.177, 7.064, 0.312, 7.997, 16.063, 144.708 ], "C_alpha": [ -6.731, 2.026, 0.815 ] }, { "index": 594, "ntaa": "G-phe", "nt": "///A/844", "aa": "///W/26", "trs_dist": 7.326, "rot_dist": 172.029, "six_params": [ -1.908, 6.277, 3.261, 9.820, -32.018, 171.676 ], "C_alpha": [ -6.181, -2.358, 3.118 ] }, { "index": 595, "ntaa": "G-gly", "nt": "///A/844", "aa": "///W/27", "trs_dist": 7.234, "rot_dist": -143.214, "six_params": [ -3.628, -5.051, 3.696, 19.086, 7.526, -142.594 ], "C_alpha": [ -6.411, 1.407, 3.000 ] }, { "index": 596, "ntaa": "G-gly", "nt": "///A/844", "aa": "///W/28", "trs_dist": -7.706, "rot_dist": -141.300, "six_params": [ -4.634, -6.078, 0.984, -13.539, -55.678, -135.634 ], "C_alpha": [ -7.396, 2.064, -0.603 ] }, { "index": 597, "ntaa": "G-phe", "nt": "///A/845", "aa": "///W/26", "trs_dist": -9.197, "rot_dist": 137.086, "six_params": [ 1.115, 9.103, -0.684, -8.260, -25.573, 135.815 ], "C_alpha": [ -7.872, 4.613, -1.077 ] }, { "index": 598, "ntaa": "G-phe", "nt": "///A/846", "aa": "///W/26", "trs_dist": -9.223, "rot_dist": 137.243, "six_params": [ 1.996, 7.183, -5.430, -21.968, -17.505, 135.857 ], "C_alpha": [ -4.506, 4.955, -6.336 ] }, { "index": 599, "ntaa": "U-lys", "nt": "///A/857", "aa": "///M/8", "trs_dist": 10.639, "rot_dist": -145.025, "six_params": [ -1.298, -9.973, 3.469, -38.540, -49.879, -138.720 ], "C_alpha": [ -9.046, 0.140, 5.594 ] }, { "index": 600, "ntaa": "C-phe", "nt": "///A/862", "aa": "///M/29", "trs_dist": -11.050, "rot_dist": -148.277, "six_params": [ -3.837, -7.186, -7.465, -21.081, 65.349, -141.344 ], "C_alpha": [ -9.983, 3.789, -2.862 ] }, { "index": 601, "ntaa": "C-leu", "nt": "///A/877", "aa": "///m/89", "trs_dist": 5.969, "rot_dist": 162.206, "six_params": [ -1.451, 5.790, 0.017, 17.099, -28.284, 161.432 ], "C_alpha": [ -5.925, -0.567, 0.518 ] }, { "index": 602, "ntaa": "C-arg", "nt": "///A/877", "aa": "///m/92", "trs_dist": 0.384, "rot_dist": 126.649, "six_params": [ -0.330, 0.149, 0.127, -15.271, 11.378, 125.843 ], "C_alpha": [ -0.291, -0.206, 0.133 ] }, { "index": 603, "ntaa": "C-arg", "nt": "///A/877", "aa": "///m/93", "trs_dist": 3.820, "rot_dist": 148.068, "six_params": [ 2.548, 0.755, 2.745, 25.776, -57.749, 142.308 ], "C_alpha": [ 0.275, 0.829, 3.728 ] }, { "index": 604, "ntaa": "C-met", "nt": "///A/878", "aa": "///m/81", "trs_dist": -6.883, "rot_dist": -164.395, "six_params": [ 0.604, 6.853, 0.220, -14.719, -16.697, -164.094 ], "C_alpha": [ 6.849, 0.320, -0.563 ] }, { "index": 605, "ntaa": "C-arg", "nt": "///A/878", "aa": "///m/92", "trs_dist": -4.932, "rot_dist": -108.056, "six_params": [ 1.777, 1.850, -4.213, -0.767, 27.473, -105.585 ], "C_alpha": [ 1.887, 0.524, -4.522 ] }, { "index": 606, "ntaa": "A-phe", "nt": "///A/894", "aa": "///M/29", "trs_dist": 10.996, "rot_dist": -98.944, "six_params": [ -8.797, -2.972, 5.891, 64.766, -25.284, -75.442 ], "C_alpha": [ -10.749, 1.847, 1.438 ] }, { "index": 607, "ntaa": "A-lys", "nt": "///A/899", "aa": "///M/11", "trs_dist": 6.888, "rot_dist": -142.048, "six_params": [ 1.780, 5.400, -3.889, 79.002, -41.320, -125.676 ], "C_alpha": [ 6.732, 0.864, 1.154 ] }, { "index": 608, "ntaa": "A-gln", "nt": "///A/899", "aa": "///M/12", "trs_dist": -5.848, "rot_dist": -117.029, "six_params": [ -0.522, 5.533, -1.820, 27.049, -5.644, -114.926 ], "C_alpha": [ 4.640, 3.532, -0.496 ] }, { "index": 609, "ntaa": "A-met", "nt": "///A/899", "aa": "///M/13", "trs_dist": -6.369, "rot_dist": 164.357, "six_params": [ 5.952, -2.092, 0.879, 13.946, 88.099, 157.964 ], "C_alpha": [ 2.786, 4.335, -3.726 ] }, { "index": 610, "ntaa": "A-phe", "nt": "///A/900", "aa": "///M/9", "trs_dist": 4.897, "rot_dist": -89.416, "six_params": [ 4.047, -0.082, 2.755, 9.794, -76.985, -48.443 ], "C_alpha": [ 1.167, -0.969, 4.645 ] }, { "index": 611, "ntaa": "A-lys", "nt": "///A/900", "aa": "///M/11", "trs_dist": -5.102, "rot_dist": 104.773, "six_params": [ 0.433, -4.388, 2.567, 71.141, -2.026, 82.736 ], "C_alpha": [ 3.655, -3.535, -0.472 ] }, { "index": 612, "ntaa": "A-gln", "nt": "///A/900", "aa": "///M/12", "trs_dist": -5.431, "rot_dist": -164.951, "six_params": [ 0.402, 3.603, -4.043, 39.308, -28.810, -163.469 ], "C_alpha": [ 4.857, -0.515, -2.382 ] }, { "index": 613, "ntaa": "C-phe", "nt": "///A/910", "aa": "///W/26", "trs_dist": 8.699, "rot_dist": 55.070, "six_params": [ -8.016, -0.519, 3.339, 21.848, 38.526, 33.588 ], "C_alpha": [ -5.799, -3.198, 5.626 ] }, { "index": 614, "ntaa": "C-phe", "nt": "///A/911", "aa": "///W/26", "trs_dist": -7.943, "rot_dist": 29.286, "six_params": [ -7.436, 1.855, -2.087, 24.438, 13.258, 9.293 ], "C_alpha": [ -7.742, 1.536, -0.776 ] }, { "index": 615, "ntaa": "C-gln", "nt": "///A/912", "aa": "///W/29", "trs_dist": -10.313, "rot_dist": -144.804, "six_params": [ -7.670, -2.012, -6.594, -66.899, 38.357, -134.510 ], "C_alpha": [ -7.690, 6.654, -1.694 ] }, { "index": 616, "ntaa": "A-glu", "nt": "///A/916", "aa": "///Z/42", "trs_dist": -6.163, "rot_dist": 43.796, "six_params": [ -4.373, 1.392, -4.114, -10.587, -26.035, 33.934 ], "C_alpha": [ -3.468, -0.039, -5.093 ] }, { "index": 617, "ntaa": "A-asn", "nt": "///A/916", "aa": "///Z/43", "trs_dist": -6.653, "rot_dist": -52.865, "six_params": [ -3.970, -2.167, -4.879, -20.199, 43.249, -23.418 ], "C_alpha": [ -5.875, -1.674, -2.643 ] }, { "index": 618, "ntaa": "G-gly", "nt": "///A/917", "aa": "///Z/25", "trs_dist": 6.584, "rot_dist": 149.143, "six_params": [ -3.189, 5.704, -0.800, 59.802, -11.701, 144.043 ], "C_alpha": [ -6.184, -1.405, 1.843 ] }, { "index": 619, "ntaa": "G-met", "nt": "///A/917", "aa": "///Z/46", "trs_dist": -10.861, "rot_dist": -83.283, "six_params": [ -10.775, -1.351, -0.191, -44.370, -69.964, -9.408 ], "C_alpha": [ -9.075, -1.797, -5.683 ] }, { "index": 620, "ntaa": "U-gly", "nt": "///A/918", "aa": "///Z/25", "trs_dist": -7.017, "rot_dist": 116.577, "six_params": [ -1.664, 5.557, -3.948, 46.614, -16.391, 109.295 ], "C_alpha": [ -6.216, 2.871, -1.625 ] }, { "index": 621, "ntaa": "U-thr", "nt": "///A/948", "aa": "///M/14", "trs_dist": -7.637, "rot_dist": 134.101, "six_params": [ -1.847, 1.433, -7.271, 3.951, -83.793, 116.769 ], "C_alpha": [ 0.375, 3.832, -6.592 ] }, { "index": 622, "ntaa": "U-gly", "nt": "///A/948", "aa": "///M/15", "trs_dist": -5.857, "rot_dist": -37.606, "six_params": [ 0.842, 1.230, -5.664, -21.901, 23.658, -19.623 ], "C_alpha": [ -0.328, 0.185, -5.845 ] }, { "index": 623, "ntaa": "U-his", "nt": "///A/948", "aa": "///M/16", "trs_dist": -2.731, "rot_dist": 95.362, "six_params": [ -0.814, 0.597, -2.537, -80.104, -15.570, 54.403 ], "C_alpha": [ 0.130, -1.296, -2.403 ] }, { "index": 624, "ntaa": "U-asn", "nt": "///A/948", "aa": "///M/17", "trs_dist": -3.817, "rot_dist": 63.113, "six_params": [ 1.325, -3.535, -0.564, -1.119, -33.990, 53.982 ], "C_alpha": [ 2.911, -2.495, -0.112 ] }, { "index": 625, "ntaa": "U-arg", "nt": "///A/948", "aa": "///M/41", "trs_dist": 9.826, "rot_dist": 143.124, "six_params": [ 5.197, -7.370, 3.901, -28.527, 71.452, 132.348 ], "C_alpha": [ 8.902, 3.761, 1.747 ] }, { "index": 626, "ntaa": "A-met", "nt": "///A/949", "aa": "///M/83", "trs_dist": 8.785, "rot_dist": 144.300, "six_params": [ 0.821, -7.965, 3.614, 22.022, -13.846, 143.327 ], "C_alpha": [ 8.231, -2.227, 2.112 ] }, { "index": 627, "ntaa": "A-met", "nt": "///A/950", "aa": "///M/83", "trs_dist": 7.273, "rot_dist": 101.757, "six_params": [ -2.714, -6.671, 1.015, 5.414, -11.845, 101.151 ], "C_alpha": [ 3.407, -6.406, 0.422 ] }, { "index": 628, "ntaa": "G-met", "nt": "///A/952", "aa": "///M/83", "trs_dist": -9.835, "rot_dist": 36.554, "six_params": [ -9.680, 1.547, -0.806, -18.591, -12.271, 29.169 ], "C_alpha": [ -9.545, -1.123, -2.063 ] }, { "index": 629, "ntaa": "A-ser", "nt": "///A/978", "aa": "///Z/11", "trs_dist": 10.771, "rot_dist": 84.095, "six_params": [ 7.140, 7.049, 3.918, -54.279, -52.613, 39.978 ], "C_alpha": [ 2.149, 10.102, 3.034 ] }, { "index": 630, "ntaa": "A-asn", "nt": "///A/978", "aa": "///Z/13", "trs_dist": 7.869, "rot_dist": 18.428, "six_params": [ 4.997, 4.147, 4.444, -4.201, -6.204, 16.848 ], "C_alpha": [ 4.075, 4.968, 4.532 ] }, { "index": 631, "ntaa": "G-asn", "nt": "///A/979", "aa": "///Z/13", "trs_dist": -7.399, "rot_dist": 39.817, "six_params": [ 4.763, 5.656, -0.253, -38.362, 9.400, 5.144 ], "C_alpha": [ 4.413, 5.390, -2.498 ] }, { "index": 632, "ntaa": "C-his", "nt": "///A/982", "aa": "///R/89", "trs_dist": 11.288, "rot_dist": 24.848, "six_params": [ -9.176, 5.898, 2.904, 5.195, -24.297, 0.244 ], "C_alpha": [ -9.616, 5.792, 1.169 ] }, { "index": 633, "ntaa": "G-gln", "nt": "///A/983", "aa": "///R/91", "trs_dist": -10.367, "rot_dist": -67.344, "six_params": [ -8.973, 4.795, 1.991, 13.405, -64.073, -16.777 ], "C_alpha": [ -8.012, 6.061, -2.539 ] }, { "index": 634, "ntaa": "C-lys", "nt": "///A/984", "aa": "///Q/54", "trs_dist": 11.041, "rot_dist": -66.428, "six_params": [ -5.607, 6.424, 7.014, -2.686, 52.138, -42.609 ], "C_alpha": [ 0.555, 6.879, 8.622 ] }, { "index": 635, "ntaa": "C-lys", "nt": "///A/984", "aa": "///R/10", "trs_dist": 8.863, "rot_dist": -123.224, "six_params": [ -3.899, -7.675, -2.108, -30.436, 51.571, -113.449 ], "C_alpha": [ -8.617, -0.899, 1.810 ] }, { "index": 636, "ntaa": "C-lys", "nt": "///A/985", "aa": "///J/2", "trs_dist": 3.023, "rot_dist": -165.705, "six_params": [ 1.889, -0.704, 2.252, 1.871, -77.617, -161.621 ], "C_alpha": [ -0.719, -0.176, 2.924 ] }, { "index": 637, "ntaa": "C-thr", "nt": "///A/985", "aa": "///J/3", "trs_dist": -2.762, "rot_dist": -72.669, "six_params": [ -1.143, -2.422, 0.675, 6.773, -64.685, -34.367 ], "C_alpha": [ -1.943, -1.942, -0.186 ] }, { "index": 638, "ntaa": "C-phe", "nt": "///A/985", "aa": "///Q/57", "trs_dist": -8.230, "rot_dist": -99.018, "six_params": [ 1.712, 1.361, -7.934, 15.007, 87.815, -48.693 ], "C_alpha": [ -2.840, 3.894, -6.675 ] }, { "index": 639, "ntaa": "C-trp", "nt": "///A/985", "aa": "///Q/61", "trs_dist": -10.137, "rot_dist": -71.501, "six_params": [ -3.427, -3.729, -8.781, 2.406, 44.438, -57.467 ], "C_alpha": [ -7.421, 0.003, -6.901 ] }, { "index": 640, "ntaa": "C-lys", "nt": "///A/985", "aa": "///Q/93", "trs_dist": -9.010, "rot_dist": 67.575, "six_params": [ -6.996, 5.431, 1.654, -0.177, -42.277, 53.984 ], "C_alpha": [ -8.810, 1.610, -0.981 ] }, { "index": 641, "ntaa": "A-gly", "nt": "///A/986", "aa": "///R/9", "trs_dist": -8.531, "rot_dist": -82.900, "six_params": [ -5.341, 5.341, -3.966, -71.444, 28.911, -33.241 ], "C_alpha": [ -5.535, 4.237, -4.941 ] }, { "index": 642, "ntaa": "C-thr", "nt": "///A/995", "aa": "///J/30", "trs_dist": 8.757, "rot_dist": -167.820, "six_params": [ -1.997, -7.643, -3.779, -33.458, 68.774, -164.474 ], "C_alpha": [ -8.533, 1.978, 0.202 ] }, { "index": 643, "ntaa": "C-met", "nt": "///A/996", "aa": "///J/108", "trs_dist": -7.296, "rot_dist": 116.586, "six_params": [ -2.475, 5.729, 3.779, -69.921, -1.134, 100.216 ], "C_alpha": [ -6.859, 2.495, -0.212 ] }, { "index": 644, "ntaa": "U-arg", "nt": "///A/1002", "aa": "///J/27", "trs_dist": 5.022, "rot_dist": -171.299, "six_params": [ 0.504, 3.326, 3.730, -30.061, -4.326, -170.983 ], "C_alpha": [ 4.202, -0.052, 2.763 ] }, { "index": 645, "ntaa": "U-thr", "nt": "///A/1002", "aa": "///J/30", "trs_dist": -7.907, "rot_dist": -176.017, "six_params": [ -2.897, 7.317, -0.772, 19.206, -42.738, -175.659 ], "C_alpha": [ 7.321, 2.921, -0.556 ] }, { "index": 646, "ntaa": "G-lys", "nt": "///A/1012", "aa": "///J/68", "trs_dist": -8.580, "rot_dist": 129.964, "six_params": [ 7.295, 0.844, -4.438, -69.216, -15.809, 117.408 ], "C_alpha": [ 5.374, 5.895, -3.165 ] }, { "index": 647, "ntaa": "A-ala", "nt": "///A/1019", "aa": "///6/5", "trs_dist": 5.778, "rot_dist": 143.593, "six_params": [ -2.489, -5.040, 1.336, -49.674, 9.948, 139.560 ], "C_alpha": [ 2.930, -3.513, 3.533 ] }, { "index": 648, "ntaa": "C-ala", "nt": "///A/1020", "aa": "///6/5", "trs_dist": -8.903, "rot_dist": 73.502, "six_params": [ -6.711, 5.738, -1.141, -45.675, 31.752, 50.111 ], "C_alpha": [ -8.625, 1.737, -1.421 ] }, { "index": 649, "ntaa": "G-val", "nt": "///A/1021", "aa": "///6/23", "trs_dist": 9.606, "rot_dist": -149.437, "six_params": [ -2.500, -9.274, -0.144, -12.964, 46.093, -146.479 ], "C_alpha": [ -9.385, -0.579, 1.876 ] }, { "index": 650, "ntaa": "G-gly", "nt": "///A/1021", "aa": "///6/38", "trs_dist": -7.969, "rot_dist": 110.762, "six_params": [ -2.319, 6.742, -3.560, 22.956, -17.107, 108.207 ], "C_alpha": [ -7.046, 2.783, -2.450 ] }, { "index": 651, "ntaa": "G-ile", "nt": "///A/1046", "aa": "///I/5", "trs_dist": 9.313, "rot_dist": -142.610, "six_params": [ -1.762, 7.360, -5.427, 79.411, 30.183, -128.482 ], "C_alpha": [ 7.031, 6.019, 1.038 ] }, { "index": 652, "ntaa": "A-tyr", "nt": "///A/1047", "aa": "///I/8", "trs_dist": 12.106, "rot_dist": 129.406, "six_params": [ 10.753, 5.200, -1.972, 24.276, -71.135, 114.741 ], "C_alpha": [ 1.119, 10.649, 5.645 ] }, { "index": 653, "ntaa": "G-tyr", "nt": "///A/1048", "aa": "///I/8", "trs_dist": 12.452, "rot_dist": -74.413, "six_params": [ -1.172, 5.574, 11.073, -52.111, 44.328, -31.242 ], "C_alpha": [ 5.055, 8.833, 7.186 ] }, { "index": 654, "ntaa": "G-thr", "nt": "///A/1048", "aa": "///I/128", "trs_dist": 6.373, "rot_dist": 111.942, "six_params": [ -4.658, 3.202, 2.943, -13.469, -34.810, 107.591 ], "C_alpha": [ -5.888, -2.210, 1.033 ] }, { "index": 655, "ntaa": "G-tyr", "nt": "///A/1049", "aa": "///I/8", "trs_dist": 11.607, "rot_dist": -101.418, "six_params": [ 0.120, 9.191, 7.088, -60.839, 51.266, -69.024 ], "C_alpha": [ 8.113, 8.264, 0.889 ] }, { "index": 656, "ntaa": "G-thr", "nt": "///A/1049", "aa": "///I/128", "trs_dist": -7.061, "rot_dist": 94.552, "six_params": [ -4.087, 5.708, 0.751, -30.222, -12.809, 89.971 ], "C_alpha": [ -6.863, 1.133, -1.214 ] }, { "index": 657, "ntaa": "G-gly", "nt": "///A/1049", "aa": "///I/131", "trs_dist": 5.414, "rot_dist": 93.517, "six_params": [ -5.346, -0.051, -0.852, -60.813, 43.916, 60.556 ], "C_alpha": [ -4.591, -2.588, 1.269 ] }, { "index": 658, "ntaa": "G-ser", "nt": "///A/1049", "aa": "///I/132", "trs_dist": 5.822, "rot_dist": 120.914, "six_params": [ -0.709, 1.831, 5.481, -40.048, -38.052, 112.372 ], "C_alpha": [ -4.232, 0.026, 4.013 ] }, { "index": 659, "ntaa": "U-ala", "nt": "///A/1050", "aa": "///I/76", "trs_dist": -9.367, "rot_dist": 110.982, "six_params": [ 6.857, 4.198, 4.806, 9.334, 82.335, 81.838 ], "C_alpha": [ 3.737, 8.560, -0.587 ] }, { "index": 660, "ntaa": "U-ala", "nt": "///A/1050", "aa": "///I/77", "trs_dist": -8.499, "rot_dist": -66.507, "six_params": [ 0.749, 4.930, -6.882, 65.354, 8.440, -9.537 ], "C_alpha": [ 1.025, 7.829, -3.164 ] }, { "index": 661, "ntaa": "U-gly", "nt": "///A/1050", "aa": "///I/131", "trs_dist": 6.643, "rot_dist": -117.634, "six_params": [ 4.438, 4.504, -2.038, -20.951, -83.491, -89.786 ], "C_alpha": [ 6.599, -0.371, 0.694 ] }, { "index": 662, "ntaa": "U-ser", "nt": "///A/1050", "aa": "///I/132", "trs_dist": -5.689, "rot_dist": -109.603, "six_params": [ 1.073, 4.207, -3.676, 57.977, -12.675, -96.880 ], "C_alpha": [ 4.971, 2.597, -1.047 ] }, { "index": 663, "ntaa": "U-gln", "nt": "///A/1051", "aa": "///I/12", "trs_dist": -5.030, "rot_dist": 93.720, "six_params": [ -2.919, -0.870, -4.003, 75.068, 31.639, 51.062 ], "C_alpha": [ -4.143, -0.343, -2.817 ] }, { "index": 664, "ntaa": "U-pro", "nt": "///A/1051", "aa": "///I/23", "trs_dist": -4.140, "rot_dist": -176.224, "six_params": [ 3.077, 0.611, -2.702, 48.148, 23.229, -175.772 ], "C_alpha": [ 1.867, -2.425, -2.731 ] }, { "index": 665, "ntaa": "U-val", "nt": "///A/1051", "aa": "///I/24", "trs_dist": 3.130, "rot_dist": 176.620, "six_params": [ -1.845, -0.269, 2.514, -1.102, -83.551, 175.468 ], "C_alpha": [ 0.127, -3.074, 0.636 ] }, { "index": 666, "ntaa": "G-pro", "nt": "///A/1052", "aa": "///I/93", "trs_dist": -8.484, "rot_dist": -151.696, "six_params": [ -2.281, -8.160, 0.433, 6.666, -40.588, -149.725 ], "C_alpha": [ -8.475, 0.015, -0.870 ] }, { "index": 667, "ntaa": "G-ser", "nt": "///A/1052", "aa": "///I/135", "trs_dist": -8.289, "rot_dist": 79.865, "six_params": [ -2.570, 7.825, 0.934, -27.935, -41.700, 64.283 ], "C_alpha": [ -6.136, 5.244, -1.904 ] }, { "index": 668, "ntaa": "G-ser", "nt": "///A/1053", "aa": "///I/90", "trs_dist": -9.373, "rot_dist": -79.796, "six_params": [ -6.798, 2.647, 5.885, -17.076, -77.682, -7.046 ], "C_alpha": [ -8.644, 3.636, -0.093 ] }, { "index": 669, "ntaa": "G-ala", "nt": "///A/1053", "aa": "///I/91", "trs_dist": 7.198, "rot_dist": 61.845, "six_params": [ -6.188, 3.490, 1.158, -21.905, 9.461, 57.481 ], "C_alpha": [ -7.131, 0.307, 0.964 ] }, { "index": 670, "ntaa": "G-arg", "nt": "///A/1053", "aa": "///I/92", "trs_dist": -5.776, "rot_dist": 100.460, "six_params": [ -3.453, 2.444, -3.933, 48.970, 6.986, 90.452 ], "C_alpha": [ -5.263, 0.074, -2.369 ] }, { "index": 671, "ntaa": "G-pro", "nt": "///A/1053", "aa": "///I/93", "trs_dist": -6.898, "rot_dist": -156.901, "six_params": [ -5.022, -3.898, -2.677, 13.177, -37.502, -155.415 ], "C_alpha": [ -4.243, 3.013, -4.590 ] }, { "index": 672, "ntaa": "G-ser", "nt": "///A/1053", "aa": "///I/135", "trs_dist": -9.658, "rot_dist": 80.100, "six_params": [ 0.830, 8.963, -3.502, -28.338, -49.252, 59.011 ], "C_alpha": [ -1.588, 8.186, -4.864 ] }, { "index": 673, "ntaa": "C-ser", "nt": "///A/1054", "aa": "///I/90", "trs_dist": -8.748, "rot_dist": -100.328, "six_params": [ -1.497, 1.922, -8.402, 15.190, 82.490, -61.103 ], "C_alpha": [ -4.202, 5.794, -5.040 ] }, { "index": 674, "ntaa": "C-ala", "nt": "///A/1054", "aa": "///I/91", "trs_dist": -5.851, "rot_dist": 51.311, "six_params": [ -3.204, 4.547, -1.814, -39.291, 14.429, 30.372 ], "C_alpha": [ -4.363, 2.693, -2.839 ] }, { "index": 675, "ntaa": "A-val", "nt": "///A/1057", "aa": "///I/24", "trs_dist": -10.054, "rot_dist": 17.642, "six_params": [ 2.521, 9.511, -2.067, -0.692, -6.035, 16.571 ], "C_alpha": [ 1.230, 9.792, -1.976 ] }, { "index": 676, "ntaa": "A-gly", "nt": "///A/1057", "aa": "///I/25", "trs_dist": 8.754, "rot_dist": -126.328, "six_params": [ -6.595, 5.419, -1.942, -35.313, 82.248, -101.055 ], "C_alpha": [ -0.192, 8.649, 1.378 ] }, { "index": 677, "ntaa": "A-pro", "nt": "///A/1057", "aa": "///I/26", "trs_dist": 7.925, "rot_dist": 86.083, "six_params": [ 5.362, 2.351, 5.341, -40.370, 9.965, 77.155 ], "C_alpha": [ 2.071, 6.710, 3.741 ] }, { "index": 678, "ntaa": "A-lys", "nt": "///A/1060", "aa": "///I/10", "trs_dist": 5.588, "rot_dist": -109.407, "six_params": [ 0.742, -1.274, 5.390, -6.718, -81.377, -80.436 ], "C_alpha": [ -2.897, 1.189, 4.622 ] }, { "index": 679, "ntaa": "A-val", "nt": "///A/1060", "aa": "///I/24", "trs_dist": -4.710, "rot_dist": 145.461, "six_params": [ -4.504, -1.303, 0.447, 65.848, -35.429, 136.120 ], "C_alpha": [ -0.734, -4.373, -1.632 ] }, { "index": 680, "ntaa": "G-gln", "nt": "///A/1061", "aa": "///I/6", "trs_dist": 6.072, "rot_dist": -114.604, "six_params": [ 5.326, -2.134, 1.987, 70.663, -1.942, -97.052 ], "C_alpha": [ 1.311, -5.903, 0.491 ] }, { "index": 681, "ntaa": "G-ala", "nt": "///A/1061", "aa": "///I/7", "trs_dist": -5.453, "rot_dist": 170.845, "six_params": [ -2.210, 0.143, -4.983, -54.377, 55.116, 168.259 ], "C_alpha": [ 1.366, -4.360, -2.984 ] }, { "index": 682, "ntaa": "G-tyr", "nt": "///A/1061", "aa": "///I/8", "trs_dist": -4.307, "rot_dist": 151.438, "six_params": [ -0.046, -2.514, -3.497, 23.317, 4.612, 150.798 ], "C_alpha": [ 1.638, -0.638, -3.906 ] }, { "index": 683, "ntaa": "G-lys", "nt": "///A/1061", "aa": "///I/10", "trs_dist": -8.275, "rot_dist": 127.104, "six_params": [ 6.336, -5.320, -0.128, 51.646, 35.491, 117.144 ], "C_alpha": [ 6.611, 2.576, -4.255 ] }, { "index": 684, "ntaa": "G-ala", "nt": "///A/1064", "aa": "///I/91", "trs_dist": 6.389, "rot_dist": 160.688, "six_params": [ -4.784, 3.137, 2.843, -2.447, 28.890, 160.046 ], "C_alpha": [ -3.844, -3.318, 3.895 ] }, { "index": 685, "ntaa": "C-ala", "nt": "///A/1065", "aa": "///I/91", "trs_dist": 6.603, "rot_dist": 129.642, "six_params": [ -3.563, 5.551, -0.304, -17.808, 42.121, 125.002 ], "C_alpha": [ -6.578, -0.622, 0.168 ] }, { "index": 686, "ntaa": "C-arg", "nt": "///A/1065", "aa": "///I/92", "trs_dist": 5.590, "rot_dist": 103.370, "six_params": [ -1.341, 3.462, 4.179, -18.141, -31.618, 98.504 ], "C_alpha": [ -4.585, 0.881, 3.070 ] }, { "index": 687, "ntaa": "C-pro", "nt": "///A/1066", "aa": "///I/93", "trs_dist": 8.593, "rot_dist": -82.798, "six_params": [ -8.409, -1.758, 0.204, -60.561, 3.262, -59.311 ], "C_alpha": [ -7.995, 2.982, 1.309 ] }, { "index": 688, "ntaa": "C-ala", "nt": "///A/1069", "aa": "///I/130", "trs_dist": 7.951, "rot_dist": -128.837, "six_params": [ -3.097, -0.176, 7.321, 83.470, -16.918, -108.189 ], "C_alpha": [ -6.275, 0.443, 4.863 ] }, { "index": 689, "ntaa": "C-gly", "nt": "///A/1069", "aa": "///I/131", "trs_dist": 4.374, "rot_dist": 96.074, "six_params": [ -2.276, 3.676, 0.669, 85.558, -1.907, 48.671 ], "C_alpha": [ -3.041, 1.084, 2.956 ] }, { "index": 690, "ntaa": "C-arg", "nt": "///A/1069", "aa": "///I/134", "trs_dist": -5.942, "rot_dist": -137.143, "six_params": [ -2.768, -4.975, 1.699, 58.873, -54.408, -122.957 ], "C_alpha": [ -5.493, 0.021, -2.264 ] }, { "index": 691, "ntaa": "C-gly", "nt": "///A/1070", "aa": "///I/131", "trs_dist": -7.283, "rot_dist": 117.795, "six_params": [ 2.386, 6.741, -1.382, -20.300, 85.794, 88.039 ], "C_alpha": [ -4.098, 4.772, -3.696 ] }, { "index": 692, "ntaa": "A-arg", "nt": "///A/1078", "aa": "///I/134", "trs_dist": 4.474, "rot_dist": -70.562, "six_params": [ 2.388, -1.449, 3.495, 66.405, 22.820, -7.473 ], "C_alpha": [ 2.701, -3.171, 1.624 ] }, { "index": 693, "ntaa": "A-ser", "nt": "///A/1078", "aa": "///I/135", "trs_dist": -4.302, "rot_dist": -150.532, "six_params": [ 1.229, 2.511, -3.270, 53.269, -47.707, -143.472 ], "C_alpha": [ 4.060, -0.955, -1.089 ] }, { "index": 694, "ntaa": "A-tyr", "nt": "///A/1079", "aa": "///I/8", "trs_dist": 7.745, "rot_dist": 159.321, "six_params": [ 0.871, -6.708, 3.772, -57.894, -49.067, 153.689 ], "C_alpha": [ 3.578, -2.289, 6.452 ] }, { "index": 695, "ntaa": "A-arg", "nt": "///A/1080", "aa": "///6/12", "trs_dist": 12.259, "rot_dist": -78.106, "six_params": [ -12.253, -0.386, 0.033, 70.842, 24.263, -24.045 ], "C_alpha": [ -11.970, 1.417, 2.228 ] }, { "index": 696, "ntaa": "U-gln", "nt": "///A/1084", "aa": "///I/30", "trs_dist": -7.740, "rot_dist": 128.333, "six_params": [ -0.489, -2.253, -7.388, 81.270, -22.647, 107.960 ], "C_alpha": [ -1.907, 2.632, -7.019 ] }, { "index": 697, "ntaa": "U-pro", "nt": "///A/1087", "aa": "///I/26", "trs_dist": -5.542, "rot_dist": -65.468, "six_params": [ -0.271, 3.968, -3.860, -46.902, -22.155, -41.415 ], "C_alpha": [ 1.272, 1.733, -5.084 ] }, { "index": 698, "ntaa": "U-ala", "nt": "///A/1087", "aa": "///I/27", "trs_dist": -5.787, "rot_dist": -116.217, "six_params": [ -3.775, 3.569, -2.548, -78.747, 5.669, -93.618 ], "C_alpha": [ -1.822, 3.684, -4.063 ] }, { "index": 699, "ntaa": "U-leu", "nt": "///A/1087", "aa": "///I/28", "trs_dist": -5.441, "rot_dist": -72.173, "six_params": [ -5.175, 1.327, -1.028, -58.464, -38.136, -19.632 ], "C_alpha": [ -4.371, 0.998, -3.110 ] }, { "index": 700, "ntaa": "U-gly", "nt": "///A/1087", "aa": "///I/29", "trs_dist": -3.178, "rot_dist": -25.531, "six_params": [ -2.320, -1.378, -1.680, -25.447, -0.764, -1.933 ], "C_alpha": [ -2.341, -1.673, -1.348 ] }, { "index": 701, "ntaa": "U-gln", "nt": "///A/1087", "aa": "///I/30", "trs_dist": 4.015, "rot_dist": -116.548, "six_params": [ -2.473, -3.104, 0.609, -10.732, 73.563, -97.411 ], "C_alpha": [ -3.245, -0.805, 2.239 ] }, { "index": 702, "ntaa": "U-his", "nt": "///A/1087", "aa": "///I/31", "trs_dist": 6.884, "rot_dist": -93.389, "six_params": [ -4.995, -4.651, 0.901, -46.376, -37.426, -75.557 ], "C_alpha": [ -6.806, -0.107, 1.019 ] }, { "index": 703, "ntaa": "A-lys", "nt": "///A/1088", "aa": "///I/4", "trs_dist": 9.554, "rot_dist": 142.432, "six_params": [ -0.971, 3.606, 8.794, -58.684, 23.586, 135.562 ], "C_alpha": [ -6.684, 3.374, 5.895 ] }, { "index": 704, "ntaa": "A-gln", "nt": "///A/1088", "aa": "///I/30", "trs_dist": -7.511, "rot_dist": 43.747, "six_params": [ -4.983, 5.114, -2.329, -42.099, -0.040, 12.176 ], "C_alpha": [ -5.368, 3.387, -4.001 ] }, { "index": 705, "ntaa": "C-gln", "nt": "///A/1090", "aa": "///I/6", "trs_dist": 9.834, "rot_dist": 50.015, "six_params": [ 9.039, 3.821, 0.626, -22.131, -27.069, 36.338 ], "C_alpha": [ 7.002, 6.584, 1.979 ] }, { "index": 706, "ntaa": "U-gln", "nt": "///A/1091", "aa": "///I/6", "trs_dist": -11.395, "rot_dist": 62.065, "six_params": [ 9.784, 5.369, -2.305, -50.074, -16.600, 33.942 ], "C_alpha": [ 8.480, 6.983, -2.952 ] }, { "index": 707, "ntaa": "G-ala", "nt": "///A/1114", "aa": "///6/5", "trs_dist": 7.301, "rot_dist": 133.896, "six_params": [ -4.189, 5.821, 1.371, -24.096, 52.815, 126.794 ], "C_alpha": [ -7.059, -0.304, 1.878 ] }, { "index": 708, "ntaa": "G-gly", "nt": "///A/1114", "aa": "///6/38", "trs_dist": -7.597, "rot_dist": 55.262, "six_params": [ -5.439, 5.285, -0.441, 13.677, -25.002, 47.851 ], "C_alpha": [ -7.002, 2.776, -0.982 ] }, { "index": 709, "ntaa": "U-thr", "nt": "///A/1120", "aa": "///D/151", "trs_dist": -5.774, "rot_dist": -121.326, "six_params": [ 2.255, 3.877, -3.637, 6.530, 58.068, -111.699 ], "C_alpha": [ 3.548, 2.098, -4.033 ] }, { "index": 710, "ntaa": "U-pro", "nt": "///A/1120", "aa": "///D/152", "trs_dist": -3.551, "rot_dist": -53.173, "six_params": [ 0.703, 2.499, -2.423, -52.816, 4.470, -4.379 ], "C_alpha": [ 0.650, 1.128, -3.264 ] }, { "index": 711, "ntaa": "U-arg", "nt": "///A/1120", "aa": "///D/154", "trs_dist": -6.351, "rot_dist": -113.222, "six_params": [ -3.083, -2.870, -4.753, -23.416, -84.244, -80.818 ], "C_alpha": [ -2.036, -3.430, -4.951 ] }, { "index": 712, "ntaa": "U-phe", "nt": "///A/1120", "aa": "///D/156", "trs_dist": -9.145, "rot_dist": -101.854, "six_params": [ -3.669, -3.288, -7.705, -42.779, 25.441, -91.973 ], "C_alpha": [ -7.647, -0.285, -5.010 ] }, { "index": 713, "ntaa": "G-his", "nt": "///A/1121", "aa": "///J/77", "trs_dist": -5.866, "rot_dist": 115.092, "six_params": [ -2.713, -0.883, -5.125, 78.456, -25.728, 88.860 ], "C_alpha": [ -3.001, 0.888, -4.956 ] }, { "index": 714, "ntaa": "U-tyr", "nt": "///A/1122", "aa": "///J/75", "trs_dist": -6.310, "rot_dist": 118.092, "six_params": [ 0.137, 1.084, -6.215, 50.701, -27.587, 108.070 ], "C_alpha": [ -2.037, 3.349, -4.953 ] }, { "index": 715, "ntaa": "U-ile", "nt": "///A/1122", "aa": "///J/84", "trs_dist": -10.353, "rot_dist": -64.823, "six_params": [ 2.140, 7.478, -6.832, 25.576, 43.145, -42.474 ], "C_alpha": [ 3.015, 8.334, -5.341 ] }, { "index": 716, "ntaa": "G-gly", "nt": "///A/1127", "aa": "///J/107", "trs_dist": 8.586, "rot_dist": 100.669, "six_params": [ -5.712, 6.169, -1.744, 71.316, 0.407, 76.448 ], "C_alpha": [ -8.218, 1.163, 2.204 ] }, { "index": 717, "ntaa": "G-met", "nt": "///A/1128", "aa": "///J/108", "trs_dist": -8.566, "rot_dist": 85.643, "six_params": [ -1.853, 5.045, -6.669, 27.682, 73.538, 37.234 ], "C_alpha": [ -6.803, 4.302, -2.933 ] }, { "index": 718, "ntaa": "U-thr", "nt": "///A/1131", "aa": "///J/65", "trs_dist": -4.910, "rot_dist": 139.917, "six_params": [ -1.483, 1.651, -4.379, 54.175, 22.031, 133.749 ], "C_alpha": [ -3.975, -0.680, -2.804 ] }, { "index": 719, "ntaa": "U-lys", "nt": "///A/1131", "aa": "///J/68", "trs_dist": -4.894, "rot_dist": -56.174, "six_params": [ 1.883, -3.904, -2.272, -30.105, 47.332, -3.109 ], "C_alpha": [ 0.903, -4.463, -1.784 ] }, { "index": 720, "ntaa": "A-gly", "nt": "///A/1134", "aa": "///J/26", "trs_dist": 4.723, "rot_dist": 171.533, "six_params": [ -3.500, -3.161, -0.252, 4.742, 75.722, 169.259 ], "C_alpha": [ 2.928, -3.226, 1.845 ] }, { "index": 721, "ntaa": "A-arg", "nt": "///A/1134", "aa": "///J/27", "trs_dist": 5.588, "rot_dist": 124.151, "six_params": [ 2.594, -2.779, 4.095, 66.422, 5.274, 111.832 ], "C_alpha": [ 5.292, -0.281, 1.792 ] }, { "index": 722, "ntaa": "A-tyr", "nt": "///A/1147", "aa": "///Q/47", "trs_dist": -7.494, "rot_dist": -135.943, "six_params": [ 2.299, 3.339, -6.303, -24.204, 5.150, -134.838 ], "C_alpha": [ 2.556, -1.106, -6.960 ] }, { "index": 723, "ntaa": "A-arg", "nt": "///A/1147", "aa": "///Q/48", "trs_dist": -5.810, "rot_dist": 160.859, "six_params": [ 0.148, -1.835, -5.510, -52.240, -26.823, 158.005 ], "C_alpha": [ 4.218, 0.490, -3.962 ] }, { "index": 724, "ntaa": "A-arg", "nt": "///A/1147", "aa": "///Q/51", "trs_dist": -8.409, "rot_dist": -166.109, "six_params": [ -4.724, 6.299, -2.952, -62.383, 23.197, -163.367 ], "C_alpha": [ 3.276, 6.069, -4.803 ] }, { "index": 725, "ntaa": "A-arg", "nt": "///A/1147", "aa": "///Q/55", "trs_dist": -13.976, "rot_dist": 128.644, "six_params": [ 13.441, 1.894, -3.326, -73.246, -6.902, 114.491 ], "C_alpha": [ 7.550, 11.358, -3.049 ] }, { "index": 726, "ntaa": "G-gly", "nt": "///A/1151", "aa": "///R/9", "trs_dist": 7.799, "rot_dist": 171.140, "six_params": [ 0.785, 7.421, 2.267, -3.653, 77.601, 168.618 ], "C_alpha": [ -7.261, 2.671, 1.058 ] }, { "index": 727, "ntaa": "G-lys", "nt": "///A/1151", "aa": "///R/10", "trs_dist": -9.358, "rot_dist": -74.211, "six_params": [ -7.922, -4.305, 2.507, 38.296, -25.274, -59.999 ], "C_alpha": [ -9.312, 0.060, -0.805 ] }, { "index": 728, "ntaa": "G-his", "nt": "///A/1153", "aa": "///R/89", "trs_dist": 10.601, "rot_dist": 175.424, "six_params": [ -5.277, 9.142, -0.986, 47.524, -7.878, 174.987 ], "C_alpha": [ -9.056, -4.944, 2.427 ] }, { "index": 729, "ntaa": "G-gln", "nt": "///A/1153", "aa": "///R/91", "trs_dist": 9.373, "rot_dist": 162.692, "six_params": [ -0.933, 8.134, -4.563, 68.451, -26.462, 158.369 ], "C_alpha": [ -9.255, 1.291, 0.670 ] }, { "index": 730, "ntaa": "U-val", "nt": "///A/1185", "aa": "///Q/4", "trs_dist": 8.330, "rot_dist": -175.423, "six_params": [ -1.335, -8.161, 1.002, -47.309, -19.878, -174.922 ], "C_alpha": [ -7.177, 1.464, 3.937 ] }, { "index": 731, "ntaa": "U-ala", "nt": "///A/1186", "aa": "///Q/2", "trs_dist": 7.975, "rot_dist": 160.455, "six_params": [ 0.818, 7.800, 1.446, -9.153, 7.262, 160.352 ], "C_alpha": [ -7.611, 2.218, 0.765 ] }, { "index": 732, "ntaa": "U-val", "nt": "///A/1186", "aa": "///Q/4", "trs_dist": -9.281, "rot_dist": 147.754, "six_params": [ 4.605, 6.479, -4.791, 21.786, 2.501, 147.138 ], "C_alpha": [ -5.684, 6.385, -3.569 ] }, { "index": 733, "ntaa": "G-leu", "nt": "///A/1189", "aa": "///L/3", "trs_dist": 7.991, "rot_dist": 98.718, "six_params": [ -6.135, 4.646, -2.153, 52.989, 42.396, 76.559 ], "C_alpha": [ -7.627, -0.168, 2.392 ] }, { "index": 734, "ntaa": "G-asn", "nt": "///A/1189", "aa": "///L/4", "trs_dist": 6.125, "rot_dist": 78.716, "six_params": [ -3.063, 0.415, 5.288, 47.218, -57.327, 28.202 ], "C_alpha": [ -4.713, -2.575, 2.945 ] }, { "index": 735, "ntaa": "U-asn", "nt": "///A/1190", "aa": "///L/4", "trs_dist": -8.064, "rot_dist": -86.955, "six_params": [ -6.840, 3.018, 3.021, 11.334, -86.006, -6.674 ], "C_alpha": [ -6.984, 3.382, -2.194 ] }, { "index": 736, "ntaa": "A-ala", "nt": "///A/1192", "aa": "///E/164", "trs_dist": 5.063, "rot_dist": 179.616, "six_params": [ -1.177, -2.288, 4.360, 46.984, 63.678, 179.501 ], "C_alpha": [ 3.892, 0.975, 3.103 ] }, { "index": 737, "ntaa": "A-his", "nt": "///A/1192", "aa": "///E/165", "trs_dist": 7.627, "rot_dist": 131.840, "six_params": [ 5.709, -1.757, 4.743, 46.908, 20.706, 126.183 ], "C_alpha": [ 5.821, 4.205, 2.592 ] }, { "index": 738, "ntaa": "G-lys", "nt": "///A/1210", "aa": "///R/71", "trs_dist": 10.703, "rot_dist": -86.614, "six_params": [ 9.087, 4.081, 3.915, -58.631, -62.976, -11.057 ], "C_alpha": [ 6.980, 5.965, 5.500 ] }, { "index": 739, "ntaa": "A-lys", "nt": "///A/1214", "aa": "///Q/16", "trs_dist": 11.651, "rot_dist": 44.125, "six_params": [ 8.737, 7.096, -3.008, 41.451, -15.090, 1.068 ], "C_alpha": [ 8.810, 7.575, 0.830 ] }, { "index": 740, "ntaa": "A-asn", "nt": "///A/1228", "aa": "///L/4", "trs_dist": -7.211, "rot_dist": -178.554, "six_params": [ 1.231, 6.870, -1.812, -84.292, -31.156, -177.958 ], "C_alpha": [ 4.062, -2.207, -5.536 ] }, { "index": 741, "ntaa": "U-asn", "nt": "///A/1229", "aa": "///L/4", "trs_dist": 5.687, "rot_dist": 171.044, "six_params": [ -1.635, 0.384, 5.434, -84.483, 3.679, 167.885 ], "C_alpha": [ -4.091, -1.048, 3.813 ] }, { "index": 742, "ntaa": "C-leu", "nt": "///A/1230", "aa": "///L/3", "trs_dist": -8.670, "rot_dist": 117.872, "six_params": [ -4.823, 6.727, 2.580, -36.204, -49.057, 106.437 ], "C_alpha": [ -8.488, 0.101, -1.785 ] }, { "index": 743, "ntaa": "C-asn", "nt": "///A/1230", "aa": "///L/4", "trs_dist": -6.946, "rot_dist": 157.129, "six_params": [ -0.585, 3.808, -5.779, 64.467, -43.337, 150.508 ], "C_alpha": [ -5.811, 2.659, -2.721 ] }, { "index": 744, "ntaa": "G-lys", "nt": "///A/1235", "aa": "///E/43", "trs_dist": -9.574, "rot_dist": -44.505, "six_params": [ 5.590, 6.274, -4.588, -12.857, 21.652, -36.998 ], "C_alpha": [ 6.132, 3.934, -6.199 ] }, { "index": 745, "ntaa": "G-gln", "nt": "///A/1235", "aa": "///E/45", "trs_dist": -6.073, "rot_dist": -48.060, "six_params": [ 2.450, 0.479, -5.537, -4.717, 31.654, -36.337 ], "C_alpha": [ 0.847, -0.032, -5.990 ] }, { "index": 746, "ntaa": "G-thr", "nt": "///A/1235", "aa": "///E/82", "trs_dist": -7.102, "rot_dist": -153.041, "six_params": [ -0.216, -5.924, -3.911, 5.413, 11.822, -152.863 ], "C_alpha": [ -5.720, -0.722, -4.133 ] }, { "index": 747, "ntaa": "G-ala", "nt": "///A/1235", "aa": "///Q/2", "trs_dist": 8.421, "rot_dist": -111.551, "six_params": [ -4.242, 6.353, 3.543, -47.192, 71.383, -79.942 ], "C_alpha": [ 3.230, 7.331, 2.628 ] }, { "index": 748, "ntaa": "G-arg", "nt": "///A/1235", "aa": "///Q/3", "trs_dist": 6.278, "rot_dist": -88.053, "six_params": [ -3.428, 3.546, 3.884, -14.435, 19.429, -85.325 ], "C_alpha": [ 0.704, 4.834, 3.929 ] }, { "index": 749, "ntaa": "U-arg", "nt": "///A/1236", "aa": "///L/18", "trs_dist": 7.423, "rot_dist": 158.229, "six_params": [ 2.707, -5.194, 4.560, -36.194, -24.662, 156.513 ], "C_alpha": [ 3.681, 0.792, 6.388 ] }, { "index": 750, "ntaa": "G-arg", "nt": "///A/1237", "aa": "///L/18", "trs_dist": 10.218, "rot_dist": 177.042, "six_params": [ 4.992, -8.834, -1.199, -33.839, -12.780, 176.889 ], "C_alpha": [ 8.850, 4.718, 1.959 ] }, { "index": 751, "ntaa": "G-arg", "nt": "///A/1237", "aa": "///L/21", "trs_dist": 8.831, "rot_dist": -98.066, "six_params": [ -3.203, 7.991, 1.968, 38.855, 52.976, -77.404 ], "C_alpha": [ 3.077, 6.082, 5.603 ] }, { "index": 752, "ntaa": "C-arg", "nt": "///A/1238", "aa": "///Q/6", "trs_dist": 13.482, "rot_dist": -123.842, "six_params": [ -8.517, 10.406, -0.976, 34.549, -2.189, -120.922 ], "C_alpha": [ 4.701, 12.469, 2.005 ] }, { "index": 753, "ntaa": "G-arg", "nt": "///A/1239", "aa": "///Q/33", "trs_dist": -5.773, "rot_dist": 82.682, "six_params": [ -2.101, 4.045, -3.542, -67.448, 46.810, 10.800 ], "C_alpha": [ -3.885, 1.335, -4.071 ] }, { "index": 754, "ntaa": "G-lys", "nt": "///A/1239", "aa": "///Q/36", "trs_dist": -5.821, "rot_dist": 98.872, "six_params": [ -0.782, -2.019, -5.403, 16.029, -33.863, 93.266 ], "C_alpha": [ 1.490, -0.221, -5.613 ] }, { "index": 755, "ntaa": "G-gln", "nt": "///A/1239", "aa": "///Q/37", "trs_dist": -5.092, "rot_dist": 53.442, "six_params": [ 1.466, -2.674, -4.078, -31.212, 25.302, 35.994 ], "C_alpha": [ 1.739, -3.332, -3.430 ] }, { "index": 756, "ntaa": "A-ile", "nt": "///A/1241", "aa": "///E/76", "trs_dist": 5.297, "rot_dist": 136.370, "six_params": [ -1.885, -2.337, 4.363, 3.351, 3.124, 136.333 ], "C_alpha": [ 1.635, -2.542, 4.352 ] }, { "index": 757, "ntaa": "U-gly", "nt": "///A/1242", "aa": "///E/65", "trs_dist": 3.080, "rot_dist": -146.970, "six_params": [ 1.010, -2.321, 1.756, -10.961, -19.314, -146.321 ], "C_alpha": [ -1.831, -1.269, 2.123 ] }, { "index": 758, "ntaa": "U-arg", "nt": "///A/1242", "aa": "///E/66", "trs_dist": 5.013, "rot_dist": 169.965, "six_params": [ 1.446, -2.251, 4.239, -81.053, -6.303, 166.761 ], "C_alpha": [ -0.923, 1.303, 4.763 ] }, { "index": 759, "ntaa": "U-ala", "nt": "///A/1242", "aa": "///E/67", "trs_dist": 5.997, "rot_dist": 110.953, "six_params": [ 3.654, 2.440, 4.081, 25.668, 15.913, 108.109 ], "C_alpha": [ 1.230, 4.320, 3.981 ] }, { "index": 760, "ntaa": "U-arg", "nt": "///A/1242", "aa": "///E/68", "trs_dist": 7.737, "rot_dist": 80.163, "six_params": [ 4.731, -0.838, 6.065, -55.264, 34.408, 49.618 ], "C_alpha": [ 5.024, 4.174, 4.143 ] }, { "index": 761, "ntaa": "G-ile", "nt": "///A/1243", "aa": "///E/76", "trs_dist": -7.124, "rot_dist": 89.636, "six_params": [ -4.655, 5.374, 0.453, -21.910, -13.641, 86.607 ], "C_alpha": [ -6.992, 0.707, -1.113 ] }, { "index": 762, "ntaa": "A-lys", "nt": "///A/1249", "aa": "///2/7", "trs_dist": 8.345, "rot_dist": -161.326, "six_params": [ 0.667, -8.286, -0.727, -68.771, 37.060, -155.879 ], "C_alpha": [ -6.902, -2.689, 3.822 ] }, { "index": 763, "ntaa": "U-gln", "nt": "///A/1250", "aa": "///2/4", "trs_dist": 9.663, "rot_dist": -117.965, "six_params": [ -4.001, -7.803, 4.059, 3.104, -27.869, -115.837 ], "C_alpha": [ -9.259, -0.090, 2.767 ] }, { "index": 764, "ntaa": "G-ser", "nt": "///A/1253", "aa": "///S/13", "trs_dist": 6.197, "rot_dist": 81.076, "six_params": [ 6.112, 0.675, 0.762, 79.513, -14.962, 5.736 ], "C_alpha": [ 5.939, 0.062, 1.747 ] }, { "index": 765, "ntaa": "G-gln", "nt": "///A/1253", "aa": "///S/15", "trs_dist": -7.132, "rot_dist": -172.517, "six_params": [ -4.257, 4.905, -2.947, 23.128, -6.497, -172.349 ], "C_alpha": [ 5.129, 4.468, -2.132 ] }, { "index": 766, "ntaa": "G-lys", "nt": "///A/1253", "aa": "///S/16", "trs_dist": 7.698, "rot_dist": -165.747, "six_params": [ -5.594, 4.314, 3.059, -71.143, 34.694, -161.475 ], "C_alpha": [ 4.910, 5.741, 1.448 ] }, { "index": 767, "ntaa": "G-arg", "nt": "///A/1253", "aa": "///S/99", "trs_dist": 6.948, "rot_dist": 105.709, "six_params": [ -0.972, -6.853, 0.606, -8.750, 46.815, 97.396 ], "C_alpha": [ 4.732, -4.873, 1.451 ] }, { "index": 768, "ntaa": "A-ala", "nt": "///A/1262", "aa": "///N/15", "trs_dist": -7.222, "rot_dist": -74.490, "six_params": [ 2.693, 3.167, -5.906, -31.324, -67.570, -1.516 ], "C_alpha": [ 5.748, 1.692, -4.029 ] }, { "index": 769, "ntaa": "A-his", "nt": "///A/1262", "aa": "///N/16", "trs_dist": -5.057, "rot_dist": -59.641, "six_params": [ 0.482, 2.816, -4.172, -0.862, -5.772, -59.381 ], "C_alpha": [ 1.973, 2.074, -4.155 ] }, { "index": 770, "ntaa": "A-ala", "nt": "///A/1262", "aa": "///N/19", "trs_dist": -5.240, "rot_dist": -100.689, "six_params": [ 4.824, -1.899, -0.759, 12.335, 80.093, -65.828 ], "C_alpha": [ 1.742, -3.071, -3.871 ] }, { "index": 771, "ntaa": "G-asn", "nt": "///A/1264", "aa": "///N/23", "trs_dist": -9.146, "rot_dist": 46.084, "six_params": [ -7.277, 5.208, -1.888, -41.744, 15.868, 11.677 ], "C_alpha": [ -8.000, 3.587, -2.605 ] }, { "index": 772, "ntaa": "A-arg", "nt": "///A/1274", "aa": "///N/103", "trs_dist": -11.647, "rot_dist": -139.540, "six_params": [ -4.061, 9.487, -5.399, -22.498, 87.099, -121.472 ], "C_alpha": [ 3.958, 10.602, -2.712 ] }, { "index": 773, "ntaa": "A-gly", "nt": "///A/1274", "aa": "///N/105", "trs_dist": 7.345, "rot_dist": 19.508, "six_params": [ 5.207, 5.085, 0.994, -0.914, 11.402, 15.829 ], "C_alpha": [ 4.533, 5.777, 0.415 ] }, { "index": 774, "ntaa": "A-asp", "nt": "///A/1274", "aa": "///N/106", "trs_dist": -7.642, "rot_dist": 80.134, "six_params": [ 4.940, 0.559, -5.804, 68.724, -26.421, 34.151 ], "C_alpha": [ 4.761, 4.981, -3.284 ] }, { "index": 775, "ntaa": "A-asn", "nt": "///A/1281", "aa": "///N/23", "trs_dist": -9.280, "rot_dist": 142.718, "six_params": [ -0.381, 9.240, -0.770, -8.529, 47.422, 139.008 ], "C_alpha": [ -8.867, 2.457, -1.225 ] }, { "index": 776, "ntaa": "U-lys", "nt": "///A/1299", "aa": "///T/63", "trs_dist": 6.343, "rot_dist": 148.454, "six_params": [ 2.242, -5.568, 2.049, -89.222, -11.729, 134.788 ], "C_alpha": [ 2.967, 0.753, 5.549 ] }, { "index": 777, "ntaa": "G-lys", "nt": "///A/1325", "aa": "///T/65", "trs_dist": 9.003, "rot_dist": -72.894, "six_params": [ 8.483, 1.887, -2.352, 48.976, -53.916, -3.046 ], "C_alpha": [ 8.468, 1.619, 2.582 ] }, { "index": 778, "ntaa": "G-lys", "nt": "///A/1326", "aa": "///T/65", "trs_dist": -6.601, "rot_dist": -79.367, "six_params": [ 4.865, -1.179, -4.304, 18.655, -65.113, -44.108 ], "C_alpha": [ 5.720, -3.086, -1.156 ] }, { "index": 779, "ntaa": "U-lys", "nt": "///A/1328", "aa": "///T/18", "trs_dist": -9.929, "rot_dist": -87.751, "six_params": [ 8.172, 5.378, -1.697, -27.784, 49.105, -70.227 ], "C_alpha": [ 7.815, -0.109, -6.113 ] }, { "index": 780, "ntaa": "U-thr", "nt": "///A/1328", "aa": "///T/58", "trs_dist": -8.441, "rot_dist": 171.873, "six_params": [ 3.166, 7.813, 0.430, -41.481, -0.688, 171.309 ], "C_alpha": [ -7.199, 3.728, -2.333 ] }, { "index": 781, "ntaa": "U-tyr", "nt": "///A/1328", "aa": "///T/83", "trs_dist": -6.914, "rot_dist": 57.293, "six_params": [ -6.004, 1.154, -3.229, 5.342, -56.666, 6.847 ], "C_alpha": [ -3.816, 1.147, -5.627 ] }, { "index": 782, "ntaa": "G-ser", "nt": "///A/1351", "aa": "///X/2", "trs_dist": 6.682, "rot_dist": -136.700, "six_params": [ -5.087, 2.202, 3.731, -49.026, 15.883, -131.632 ], "C_alpha": [ 1.477, 5.708, 3.140 ] }, { "index": 783, "ntaa": "A-glu", "nt": "///A/1379", "aa": "///T/17", "trs_dist": -6.843, "rot_dist": -154.523, "six_params": [ -1.773, 4.660, -4.687, -63.136, -62.163, -144.111 ], "C_alpha": [ 1.779, -0.933, -6.542 ] }, { "index": 784, "ntaa": "A-lys", "nt": "///A/1380", "aa": "///T/18", "trs_dist": 5.926, "rot_dist": 148.387, "six_params": [ 1.287, -5.361, 2.173, 18.649, -35.089, 146.329 ], "C_alpha": [ 5.633, -0.970, 1.585 ] }, { "index": 785, "ntaa": "U-lys", "nt": "///A/1381", "aa": "///T/18", "trs_dist": -7.226, "rot_dist": 124.701, "six_params": [ -7.080, -0.859, -1.166, -27.663, -51.380, 115.786 ], "C_alpha": [ -1.906, -5.810, -3.850 ] }, { "index": 786, "ntaa": "U-lys", "nt": "///A/1440", "aa": "///N/73", "trs_dist": 10.847, "rot_dist": -110.287, "six_params": [ -5.667, 4.401, 8.135, 17.372, -5.205, -109.273 ], "C_alpha": [ -0.940, 6.741, 8.443 ] }, { "index": 787, "ntaa": "U-val", "nt": "///A/1441", "aa": "///N/60", "trs_dist": 8.489, "rot_dist": 69.767, "six_params": [ 1.427, 7.191, 4.280, 17.661, 54.582, 41.522 ], "C_alpha": [ 0.954, 7.337, 4.157 ] }, { "index": 788, "ntaa": "U-arg", "nt": "///A/1441", "aa": "///N/63", "trs_dist": 5.985, "rot_dist": -60.253, "six_params": [ 1.186, 3.424, 4.764, 21.337, -51.006, -24.955 ], "C_alpha": [ -0.541, 2.654, 5.335 ] }, { "index": 789, "ntaa": "U-arg", "nt": "///A/1441", "aa": "///N/64", "trs_dist": 5.435, "rot_dist": 40.994, "six_params": [ 2.425, 0.791, 4.799, 5.880, 20.779, 35.054 ], "C_alpha": [ 2.940, 1.518, 4.324 ] }, { "index": 790, "ntaa": "G-val", "nt": "///A/1442", "aa": "///N/60", "trs_dist": -10.745, "rot_dist": 32.640, "six_params": [ 4.610, 9.204, -3.083, -1.199, 23.582, 22.696 ], "C_alpha": [ 1.985, 9.737, -4.057 ] }, { "index": 791, "ntaa": "G-arg", "nt": "///A/1442", "aa": "///N/64", "trs_dist": -10.927, "rot_dist": 34.405, "six_params": [ 6.913, 3.018, -7.907, 25.162, -1.542, 23.606 ], "C_alpha": [ 5.905, 5.999, -6.972 ] }, { "index": 792, "ntaa": "A-ile", "nt": "///A/1477", "aa": "///C/74", "trs_dist": -5.718, "rot_dist": -28.969, "six_params": [ 1.870, 2.850, -4.591, -5.673, -14.823, -24.312 ], "C_alpha": [ 2.934, 2.053, -4.443 ] }, { "index": 793, "ntaa": "A-pro", "nt": "///A/1477", "aa": "///C/75", "trs_dist": -7.102, "rot_dist": 101.229, "six_params": [ 5.059, -4.428, -2.288, 35.333, 73.859, 65.725 ], "C_alpha": [ 3.614, -1.368, -6.014 ] }, { "index": 794, "ntaa": "A-ala", "nt": "///A/1477", "aa": "///C/97", "trs_dist": -5.387, "rot_dist": -81.561, "six_params": [ -4.394, 0.151, -3.114, -53.799, -60.593, -10.219 ], "C_alpha": [ -2.422, -1.511, -4.569 ] }, { "index": 795, "ntaa": "A-asp", "nt": "///A/1477", "aa": "///C/98", "trs_dist": -7.554, "rot_dist": -97.939, "six_params": [ -3.060, -5.686, -3.920, 44.307, 34.778, -83.747 ], "C_alpha": [ -5.943, -0.022, -4.660 ] }, { "index": 796, "ntaa": "G-asp", "nt": "///A/1478", "aa": "///C/98", "trs_dist": -8.571, "rot_dist": -39.860, "six_params": [ -3.157, 7.046, -3.721, -14.173, -37.160, -2.723 ], "C_alpha": [ -1.501, 6.512, -5.337 ] }, { "index": 797, "ntaa": "G-asp", "nt": "///A/1487", "aa": "///C/98", "trs_dist": 6.742, "rot_dist": 131.628, "six_params": [ -3.081, 5.985, 0.370, 39.613, 6.191, 128.286 ], "C_alpha": [ -6.227, -0.324, 2.519 ] }, { "index": 798, "ntaa": "A-his", "nt": "///A/1556", "aa": "///C/58", "trs_dist": 9.367, "rot_dist": 90.512, "six_params": [ -7.044, 2.679, 5.562, -83.401, -25.158, 27.493 ], "C_alpha": [ -8.765, 3.135, 0.874 ] }, { "index": 799, "ntaa": "A-trp", "nt": "///A/1556", "aa": "///C/213", "trs_dist": -7.475, "rot_dist": -161.698, "six_params": [ -1.448, -6.223, -3.879, 43.999, 62.927, -156.586 ], "C_alpha": [ -5.210, 2.850, -4.531 ] }, { "index": 800, "ntaa": "A-tyr", "nt": "///A/1557", "aa": "///C/83", "trs_dist": 5.767, "rot_dist": 172.356, "six_params": [ 2.019, 4.344, 3.210, 71.880, -39.617, 169.860 ], "C_alpha": [ -1.411, 0.566, 5.561 ] }, { "index": 801, "ntaa": "G-his", "nt": "///A/1558", "aa": "///C/58", "trs_dist": -10.811, "rot_dist": 128.706, "six_params": [ -1.574, 10.629, -1.186, -14.880, -24.817, 126.897 ], "C_alpha": [ -9.767, 3.612, -2.834 ] }, { "index": 802, "ntaa": "A-pro", "nt": "///A/1604", "aa": "///S/87", "trs_dist": -5.169, "rot_dist": -42.710, "six_params": [ 3.403, 2.979, -2.502, -42.523, -0.052, -4.086 ], "C_alpha": [ 3.490, 1.723, -3.375 ] }, { "index": 803, "ntaa": "A-arg", "nt": "///A/1604", "aa": "///S/88", "trs_dist": -5.666, "rot_dist": -21.792, "six_params": [ 4.233, -1.724, -3.348, 11.358, -14.239, -12.014 ], "C_alpha": [ 4.472, -1.901, -2.945 ] }, { "index": 804, "ntaa": "A-gly", "nt": "///A/1604", "aa": "///S/91", "trs_dist": 3.452, "rot_dist": -175.053, "six_params": [ 1.724, -1.253, 2.715, -80.550, 5.476, -173.506 ], "C_alpha": [ 0.902, -1.826, 2.785 ] }, { "index": 805, "ntaa": "A-arg", "nt": "///A/1604", "aa": "///S/92", "trs_dist": 5.298, "rot_dist": 140.128, "six_params": [ 0.588, -4.728, 2.316, -6.304, 7.079, 139.985 ], "C_alpha": [ 4.574, -0.880, 2.536 ] }, { "index": 806, "ntaa": "A-ala", "nt": "///A/1604", "aa": "///S/93", "trs_dist": 5.764, "rot_dist": 131.561, "six_params": [ 3.585, -3.599, 2.724, 23.923, 51.437, 124.424 ], "C_alpha": [ 5.416, 1.936, 0.126 ] }, { "index": 807, "ntaa": "C-pro", "nt": "///A/1605", "aa": "///S/87", "trs_dist": -6.290, "rot_dist": 101.319, "six_params": [ 0.345, -0.459, -6.264, 36.904, -56.869, 80.412 ], "C_alpha": [ 1.609, 3.200, -5.197 ] }, { "index": 808, "ntaa": "G-met", "nt": "///A/1609", "aa": "///4/1", "trs_dist": 7.888, "rot_dist": 77.070, "six_params": [ -6.979, 2.281, -2.885, 55.732, 52.695, 8.200 ], "C_alpha": [ -7.416, 2.060, 1.714 ] }, { "index": 809, "ntaa": "G-asp", "nt": "///A/1639", "aa": "///N/106", "trs_dist": -7.155, "rot_dist": 70.344, "six_params": [ -6.303, 3.140, 1.265, 10.517, -59.866, 37.244 ], "C_alpha": [ -6.834, 1.031, -1.768 ] }, { "index": 810, "ntaa": "G-asn", "nt": "///A/1639", "aa": "///N/107", "trs_dist": 8.066, "rot_dist": -81.330, "six_params": [ -4.701, -5.875, -2.906, -25.390, 35.872, -70.239 ], "C_alpha": [ -7.787, -2.148, -0.005 ] }, { "index": 811, "ntaa": "A-ser", "nt": "///A/1642", "aa": "///N/11", "trs_dist": 7.654, "rot_dist": 72.106, "six_params": [ 7.023, 0.458, -3.009, 12.727, -66.275, 27.054 ], "C_alpha": [ 7.178, 2.308, 1.357 ] }, { "index": 812, "ntaa": "G-his", "nt": "///A/1643", "aa": "///N/9", "trs_dist": 5.855, "rot_dist": 27.279, "six_params": [ 4.388, 1.574, 3.543, -20.160, -7.686, 16.792 ], "C_alpha": [ 3.791, 2.784, 3.488 ] }, { "index": 813, "ntaa": "G-leu", "nt": "///A/1643", "aa": "///N/10", "trs_dist": 5.821, "rot_dist": 59.433, "six_params": [ 5.719, 0.771, -0.763, 56.773, -15.421, 8.846 ], "C_alpha": [ 5.656, 1.289, 0.461 ] }, { "index": 814, "ntaa": "G-ser", "nt": "///A/1643", "aa": "///N/11", "trs_dist": 3.747, "rot_dist": -97.423, "six_params": [ 2.225, -0.275, 3.003, 9.210, 89.071, -43.287 ], "C_alpha": [ 3.286, -1.755, 0.537 ] }, { "index": 815, "ntaa": "A-phe", "nt": "///A/1644", "aa": "///D/118", "trs_dist": 8.163, "rot_dist": -36.419, "six_params": [ -7.835, 2.115, -0.882, -24.147, 19.926, -18.845 ], "C_alpha": [ -7.456, 3.258, 0.034 ] }, { "index": 816, "ntaa": "A-phe", "nt": "///A/1645", "aa": "///D/118", "trs_dist": -10.888, "rot_dist": -59.785, "six_params": [ -6.837, 6.812, -5.040, -6.198, 19.520, -56.475 ], "C_alpha": [ -3.620, 9.354, -4.194 ] }, { "index": 817, "ntaa": "A-tyr", "nt": "///A/1655", "aa": "///K/32", "trs_dist": 10.499, "rot_dist": -166.353, "six_params": [ -0.755, -9.151, -5.091, -57.560, 18.784, -164.185 ], "C_alpha": [ -10.484, -0.273, 0.100 ] }, { "index": 818, "ntaa": "G-gln", "nt": "///A/1656", "aa": "///K/3", "trs_dist": -10.475, "rot_dist": -32.655, "six_params": [ -9.971, 3.066, -0.953, -13.573, -2.799, -29.641 ], "C_alpha": [ -8.855, 5.339, -1.563 ] }, { "index": 819, "ntaa": "A-thr", "nt": "///A/1659", "aa": "///K/4", "trs_dist": -11.066, "rot_dist": 178.339, "six_params": [ 7.600, -1.224, -7.951, -8.272, -81.263, 177.805 ], "C_alpha": [ 1.762, 10.888, -0.994 ] }, { "index": 820, "ntaa": "A-gln", "nt": "///A/1659", "aa": "///K/5", "trs_dist": 9.971, "rot_dist": 68.693, "six_params": [ 6.615, 5.722, 4.788, -48.005, -5.174, 50.415 ], "C_alpha": [ 2.745, 9.278, 2.319 ] }, { "index": 821, "ntaa": "C-his", "nt": "///A/1660", "aa": "///D/134", "trs_dist": 8.416, "rot_dist": 75.171, "six_params": [ -6.357, 0.191, 5.511, -42.518, -46.464, 43.347 ], "C_alpha": [ -8.022, -1.392, 2.179 ] }, { "index": 822, "ntaa": "U-his", "nt": "///A/1661", "aa": "///D/134", "trs_dist": -11.922, "rot_dist": -78.988, "six_params": [ -9.387, 6.177, 3.982, -76.104, -20.642, -5.033 ], "C_alpha": [ -9.244, 7.197, -2.280 ] }, { "index": 823, "ntaa": "G-his", "nt": "///A/1663", "aa": "///D/134", "trs_dist": 5.691, "rot_dist": -109.186, "six_params": [ 4.485, 3.475, -0.447, 27.818, -50.830, -97.055 ], "C_alpha": [ 5.135, -0.901, 2.325 ] }, { "index": 824, "ntaa": "C-thr", "nt": "///A/1665", "aa": "///D/133", "trs_dist": 3.720, "rot_dist": -147.616, "six_params": [ 0.345, -3.609, 0.833, 20.659, 20.954, -146.487 ], "C_alpha": [ -3.403, -1.489, 0.082 ] }, { "index": 825, "ntaa": "C-his", "nt": "///A/1665", "aa": "///D/134", "trs_dist": -4.968, "rot_dist": -166.884, "six_params": [ -2.069, -2.153, -3.971, -48.881, -34.719, -164.847 ], "C_alpha": [ -3.810, 0.448, -3.162 ] }, { "index": 826, "ntaa": "A-thr", "nt": "///A/1666", "aa": "///D/133", "trs_dist": -8.749, "rot_dist": 152.877, "six_params": [ 2.528, 8.209, -1.667, -27.206, 0.766, 152.078 ], "C_alpha": [ -6.762, 4.250, -3.583 ] }, { "index": 827, "ntaa": "U-arg", "nt": "///A/1683", "aa": "///C/14", "trs_dist": 9.933, "rot_dist": 172.594, "six_params": [ -1.513, 9.359, 2.962, 8.868, 54.325, 171.648 ], "C_alpha": [ -9.042, 0.827, 4.008 ] }, { "index": 828, "ntaa": "G-pro", "nt": "///A/1685", "aa": "///C/8", "trs_dist": 9.572, "rot_dist": 125.509, "six_params": [ 6.872, 5.029, 4.372, 28.737, 52.716, 116.160 ], "C_alpha": [ 0.839, 9.362, 1.941 ] }, { "index": 829, "ntaa": "G-arg", "nt": "///A/1685", "aa": "///C/14", "trs_dist": 12.265, "rot_dist": -69.647, "six_params": [ -0.917, 9.893, 7.191, -41.730, 46.449, -32.547 ], "C_alpha": [ 4.488, 10.994, 3.076 ] }, { "index": 830, "ntaa": "A-lys", "nt": "///A/1741", "aa": "///P/95", "trs_dist": 9.541, "rot_dist": 82.256, "six_params": [ -6.328, 0.081, 7.140, -52.631, -2.830, 65.592 ], "C_alpha": [ -7.185, -0.819, 6.196 ] }, { "index": 831, "ntaa": "A-ala", "nt": "///A/1760", "aa": "///C/11", "trs_dist": 4.480, "rot_dist": 150.066, "six_params": [ -3.793, -0.830, 2.234, 58.003, 25.918, 144.633 ], "C_alpha": [ 0.933, -3.727, 2.322 ] }, { "index": 832, "ntaa": "C-ala", "nt": "///A/1761", "aa": "///C/11", "trs_dist": -6.532, "rot_dist": 101.345, "six_params": [ -3.992, 3.424, -3.874, 55.224, -9.180, 88.269 ], "C_alpha": [ -6.104, 0.901, -2.136 ] }, { "index": 833, "ntaa": "U-ala", "nt": "///A/1762", "aa": "///C/208", "trs_dist": -4.507, "rot_dist": 75.794, "six_params": [ -1.599, -1.862, -3.781, -13.701, -69.549, 28.789 ], "C_alpha": [ 1.325, -2.061, -3.783 ] }, { "index": 834, "ntaa": "C-lys", "nt": "///A/1782", "aa": "///C/254", "trs_dist": 8.457, "rot_dist": 146.524, "six_params": [ -0.848, 5.536, 6.337, -57.106, -12.034, 141.479 ], "C_alpha": [ -7.868, 1.345, 2.797 ] }, { "index": 835, "ntaa": "U-arg", "nt": "///A/1785", "aa": "///C/272", "trs_dist": 11.420, "rot_dist": 60.848, "six_params": [ 9.604, 4.875, 3.800, 31.438, -21.224, 48.490 ], "C_alpha": [ 6.464, 6.669, 6.648 ] }, { "index": 836, "ntaa": "G-gln", "nt": "///A/1786", "aa": "///C/153", "trs_dist": 8.920, "rot_dist": 122.171, "six_params": [ -6.285, 5.857, -2.403, 53.610, 51.435, 105.313 ], "C_alpha": [ -8.180, -1.424, 3.270 ] }, { "index": 837, "ntaa": "G-ile", "nt": "///A/1786", "aa": "///C/154", "trs_dist": 5.771, "rot_dist": 82.811, "six_params": [ -4.113, 2.528, 3.161, 42.024, -13.124, 71.998 ], "C_alpha": [ -4.396, -1.566, 3.369 ] }, { "index": 838, "ntaa": "G-ala", "nt": "///A/1786", "aa": "///C/155", "trs_dist": 5.485, "rot_dist": 61.149, "six_params": [ -0.830, -3.097, 4.451, 25.202, -51.943, 21.078 ], "C_alpha": [ -1.770, -4.318, 2.903 ] }, { "index": 839, "ntaa": "G-leu", "nt": "///A/1786", "aa": "///C/176", "trs_dist": 5.970, "rot_dist": -57.920, "six_params": [ 4.394, 3.192, 2.478, 21.124, -46.828, -27.712 ], "C_alpha": [ 3.453, 1.761, 4.534 ] }, { "index": 840, "ntaa": "G-arg", "nt": "///A/1786", "aa": "///C/177", "trs_dist": 5.384, "rot_dist": 71.758, "six_params": [ 3.883, -2.380, 2.871, 36.766, -4.120, 62.614 ], "C_alpha": [ 4.900, -0.753, 2.102 ] }, { "index": 841, "ntaa": "G-ser", "nt": "///A/1786", "aa": "///C/178", "trs_dist": -5.634, "rot_dist": 137.989, "six_params": [ 3.783, -4.081, 0.885, -2.854, 45.756, 134.191 ], "C_alpha": [ 5.255, 1.959, -0.554 ] }, { "index": 842, "ntaa": "G-glu", "nt": "///A/1786", "aa": "///C/180", "trs_dist": 8.582, "rot_dist": -175.688, "six_params": [ -6.708, 5.258, -1.001, 39.559, 31.616, -175.230 ], "C_alpha": [ 4.687, 6.687, 2.634 ] }, { "index": 843, "ntaa": "A-arg", "nt": "///A/1788", "aa": "///C/263", "trs_dist": 8.355, "rot_dist": 125.057, "six_params": [ -4.264, -4.302, 5.755, -48.543, 72.010, 101.140 ], "C_alpha": [ 1.141, -0.475, 8.253 ] }, { "index": 844, "ntaa": "A-thr", "nt": "///A/1792", "aa": "///C/50", "trs_dist": -7.905, "rot_dist": 128.668, "six_params": [ 0.484, 7.737, -1.546, 8.203, 4.131, 128.490 ], "C_alpha": [ -6.855, 3.792, -1.002 ] }, { "index": 845, "ntaa": "C-asn", "nt": "///A/1793", "aa": "///C/44", "trs_dist": -9.345, "rot_dist": -32.407, "six_params": [ -8.884, 2.506, -1.459, -17.484, -26.906, -4.597 ], "C_alpha": [ -8.164, 2.437, -3.825 ] }, { "index": 846, "ntaa": "C-asn", "nt": "///A/1793", "aa": "///C/46", "trs_dist": 10.261, "rot_dist": -150.775, "six_params": [ -6.175, -8.172, -0.614, 5.858, 43.509, -148.433 ], "C_alpha": [ -9.520, 3.577, 1.304 ] }, { "index": 847, "ntaa": "A-arg", "nt": "///A/1795", "aa": "///X/28", "trs_dist": 7.286, "rot_dist": 105.267, "six_params": [ -1.756, -3.829, 5.944, -52.929, -8.333, 94.330 ], "C_alpha": [ -0.910, -2.182, 6.875 ] }, { "index": 848, "ntaa": "G-asn", "nt": "///A/1798", "aa": "///C/45", "trs_dist": 9.550, "rot_dist": -99.532, "six_params": [ -4.946, -7.011, 4.194, 8.672, -32.089, -95.236 ], "C_alpha": [ -9.271, -0.579, 2.118 ] }, { "index": 849, "ntaa": "U-asn", "nt": "///A/1799", "aa": "///C/44", "trs_dist": 7.542, "rot_dist": 154.278, "six_params": [ 1.191, 7.415, -0.698, 34.749, 12.998, 152.842 ], "C_alpha": [ -6.815, 2.904, 1.403 ] }, { "index": 850, "ntaa": "G-thr", "nt": "///A/1800", "aa": "///C/50", "trs_dist": -7.556, "rot_dist": 18.675, "six_params": [ -6.599, 3.114, -1.964, -4.407, -6.847, 16.820 ], "C_alpha": [ -6.832, 2.050, -2.476 ] }, { "index": 851, "ntaa": "G-thr", "nt": "///A/1800", "aa": "///C/51", "trs_dist": 7.844, "rot_dist": -78.390, "six_params": [ -6.361, -0.932, 4.494, -55.593, -54.397, -10.645 ], "C_alpha": [ -7.654, 1.194, 1.142 ] }, { "index": 852, "ntaa": "C-glu", "nt": "///A/1803", "aa": "///C/35", "trs_dist": 10.808, "rot_dist": 102.780, "six_params": [ 10.066, 1.219, 3.742, 75.139, 22.660, 72.644 ], "C_alpha": [ 8.964, 5.743, 1.791 ] }, { "index": 853, "ntaa": "C-tyr", "nt": "///A/1803", "aa": "///C/62", "trs_dist": 10.554, "rot_dist": -115.911, "six_params": [ -4.315, 9.631, 0.075, 9.653, 77.351, -93.923 ], "C_alpha": [ 4.829, 8.700, 3.495 ] }, { "index": 854, "ntaa": "U-gln", "nt": "///A/1805", "aa": "///C/153", "trs_dist": 4.916, "rot_dist": -116.604, "six_params": [ 0.037, 3.300, 3.643, 45.005, -45.647, -103.377 ], "C_alpha": [ 0.345, 2.311, 4.340 ] }, { "index": 855, "ntaa": "U-arg", "nt": "///A/1805", "aa": "///C/156", "trs_dist": 10.687, "rot_dist": 150.706, "six_params": [ 9.007, 4.984, 2.870, 21.979, -15.136, 149.874 ], "C_alpha": [ -1.899, 9.292, 4.917 ] }, { "index": 856, "ntaa": "A-ser", "nt": "///A/1806", "aa": "///C/178", "trs_dist": 6.388, "rot_dist": -53.359, "six_params": [ -5.469, 1.756, 2.796, 38.948, 17.116, -32.985 ], "C_alpha": [ -4.586, 1.974, 3.990 ] }, { "index": 857, "ntaa": "U-ala", "nt": "///A/1807", "aa": "///C/158", "trs_dist": 6.219, "rot_dist": 50.429, "six_params": [ -0.862, 3.618, 4.984, 19.080, -25.772, 39.446 ], "C_alpha": [ -2.830, 1.919, 5.187 ] }, { "index": 858, "ntaa": "U-gly", "nt": "///A/1807", "aa": "///C/159", "trs_dist": 4.388, "rot_dist": 123.834, "six_params": [ -0.619, -1.512, 4.072, -53.376, 65.074, 101.268 ], "C_alpha": [ 0.768, 1.685, 4.012 ] }, { "index": 859, "ntaa": "U-arg", "nt": "///A/1807", "aa": "///C/177", "trs_dist": 13.077, "rot_dist": 84.602, "six_params": [ 7.472, 10.724, 0.400, 72.964, 29.468, 33.966 ], "C_alpha": [ 5.187, 10.983, 4.832 ] }, { "index": 860, "ntaa": "U-asn", "nt": "///A/1807", "aa": "///C/197", "trs_dist": 5.403, "rot_dist": -79.092, "six_params": [ -2.460, -0.124, 4.809, 78.619, 0.814, -9.396 ], "C_alpha": [ -2.690, -2.939, 3.651 ] }, { "index": 861, "ntaa": "U-ser", "nt": "///A/1807", "aa": "///C/198", "trs_dist": 1.786, "rot_dist": 173.487, "six_params": [ -1.688, 0.255, 0.524, 1.393, 45.581, 172.935 ], "C_alpha": [ -0.331, -1.346, 1.138 ] }, { "index": 862, "ntaa": "U-his", "nt": "///A/1807", "aa": "///C/200", "trs_dist": -5.294, "rot_dist": -116.597, "six_params": [ -3.168, -4.188, 0.672, 69.073, 19.640, -99.103 ], "C_alpha": [ -5.124, -0.125, -1.313 ] }, { "index": 863, "ntaa": "U-ser", "nt": "///A/1807", "aa": "///C/201", "trs_dist": -5.864, "rot_dist": -156.014, "six_params": [ -4.377, -3.537, -1.647, 18.214, -49.964, -153.127 ], "C_alpha": [ -3.735, 2.339, -3.857 ] }, { "index": 864, "ntaa": "G-thr", "nt": "///A/1811", "aa": "///C/253", "trs_dist": -8.369, "rot_dist": 89.915, "six_params": [ -6.320, 5.406, -0.931, 59.570, -51.859, 47.035 ], "C_alpha": [ -7.776, 3.006, -0.761 ] }, { "index": 865, "ntaa": "G-lys", "nt": "///A/1811", "aa": "///C/254", "trs_dist": -8.324, "rot_dist": 79.937, "six_params": [ -5.926, 1.264, -5.708, 21.103, 68.947, 37.135 ], "C_alpha": [ -8.222, -0.763, -1.054 ] }, { "index": 866, "ntaa": "U-lys", "nt": "///A/1812", "aa": "///C/254", "trs_dist": -9.978, "rot_dist": 64.889, "six_params": [ -2.565, 2.971, -9.173, 32.525, 55.117, 11.335 ], "C_alpha": [ -6.751, 4.498, -5.800 ] }, { "index": 867, "ntaa": "U-arg", "nt": "///A/1814", "aa": "///C/221", "trs_dist": 9.896, "rot_dist": 166.972, "six_params": [ 5.254, -6.740, 4.989, 24.471, 49.852, 165.267 ], "C_alpha": [ 8.145, 5.544, 0.831 ] }, { "index": 868, "ntaa": "G-arg", "nt": "///A/1815", "aa": "///C/221", "trs_dist": -7.874, "rot_dist": 122.315, "six_params": [ 4.075, -6.503, 1.759, 36.535, 47.047, 112.465 ], "C_alpha": [ 7.589, -0.248, -2.057 ] }, { "index": 869, "ntaa": "A-phe", "nt": "///A/1816", "aa": "///C/15", "trs_dist": 10.973, "rot_dist": -145.166, "six_params": [ -5.874, -8.850, -2.753, -15.875, 57.005, -139.733 ], "C_alpha": [ -10.515, 2.725, 1.558 ] }, { "index": 870, "ntaa": "U-his", "nt": "///A/1828", "aa": "///C/244", "trs_dist": 9.356, "rot_dist": 55.286, "six_params": [ -7.522, 1.230, 5.427, -5.646, -44.326, 33.426 ], "C_alpha": [ -9.015, -1.226, 2.131 ] }, { "index": 871, "ntaa": "A-ile", "nt": "///A/1939", "aa": "///K/22", "trs_dist": -5.180, "rot_dist": -66.667, "six_params": [ 2.969, 2.624, -3.337, -39.601, 48.115, -24.983 ], "C_alpha": [ 1.402, 0.882, -4.924 ] }, { "index": 872, "ntaa": "U-arg", "nt": "///A/1958", "aa": "///C/238", "trs_dist": 10.358, "rot_dist": -90.043, "six_params": [ -1.111, 6.486, 7.999, -45.599, -59.012, -54.644 ], "C_alpha": [ 0.342, 9.771, 3.408 ] }, { "index": 873, "ntaa": "U-ser", "nt": "///A/1958", "aa": "///C/240", "trs_dist": 5.956, "rot_dist": -75.221, "six_params": [ -4.382, 2.903, 2.802, 33.141, 10.965, -67.718 ], "C_alpha": [ -2.295, 3.860, 3.927 ] }, { "index": 874, "ntaa": "A-arg", "nt": "///A/1964", "aa": "///C/14", "trs_dist": -9.287, "rot_dist": -151.656, "six_params": [ 3.649, -7.705, -3.684, 46.604, -42.475, -146.615 ], "C_alpha": [ -4.155, -6.747, -4.832 ] }, { "index": 875, "ntaa": "U-gln", "nt": "///A/1982", "aa": "///K/3", "trs_dist": -8.411, "rot_dist": -170.937, "six_params": [ -0.397, -8.126, -2.136, -5.078, -17.401, -170.823 ], "C_alpha": [ -8.179, -0.540, -1.800 ] }, { "index": 876, "ntaa": "U-tyr", "nt": "///A/1982", "aa": "///K/32", "trs_dist": 9.908, "rot_dist": -46.275, "six_params": [ -7.261, -0.962, 6.672, 19.171, -39.874, -13.917 ], "C_alpha": [ -9.206, -0.717, 3.563 ] }, { "index": 877, "ntaa": "C-tyr", "nt": "///A/1983", "aa": "///K/32", "trs_dist": 11.382, "rot_dist": 59.628, "six_params": [ 10.582, 0.644, -4.140, 0.141, -45.204, 39.956 ], "C_alpha": [ 10.446, 4.484, 0.242 ] }, { "index": 878, "ntaa": "A-asp", "nt": "///A/1996", "aa": "///N/106", "trs_dist": -7.285, "rot_dist": 132.561, "six_params": [ -1.154, 5.035, -5.137, 47.976, -28.458, 125.854 ], "C_alpha": [ -6.040, 2.919, -2.793 ] }, { "index": 879, "ntaa": "U-lys", "nt": "///A/1998", "aa": "///S/16", "trs_dist": 12.786, "rot_dist": 161.505, "six_params": [ 5.401, -6.955, 9.270, -26.077, 80.150, 154.966 ], "C_alpha": [ 7.431, 9.188, 4.876 ] }, { "index": 880, "ntaa": "G-lys", "nt": "///A/1999", "aa": "///S/16", "trs_dist": 8.852, "rot_dist": -81.328, "six_params": [ 7.508, 1.881, -4.295, 55.661, -58.480, -10.770 ], "C_alpha": [ 8.574, 1.903, 1.093 ] }, { "index": 881, "ntaa": "A-arg", "nt": "///A/2000", "aa": "///S/88", "trs_dist": -11.066, "rot_dist": 46.050, "six_params": [ -10.706, 1.776, 2.165, 28.416, -35.482, 7.564 ], "C_alpha": [ -10.983, 0.872, -0.789 ] }, { "index": 882, "ntaa": "A-val", "nt": "///A/2002", "aa": "///2/3", "trs_dist": 4.758, "rot_dist": 95.186, "six_params": [ -1.000, 0.940, 4.556, -0.373, -12.808, 94.526 ], "C_alpha": [ -1.719, -0.447, 4.410 ] }, { "index": 883, "ntaa": "U-gln", "nt": "///A/2003", "aa": "///2/4", "trs_dist": 10.799, "rot_dist": 164.206, "six_params": [ 9.805, 1.596, 4.234, 18.292, 37.087, 163.111 ], "C_alpha": [ 0.422, 10.736, 1.105 ] }, { "index": 884, "ntaa": "U-gln", "nt": "///A/2004", "aa": "///2/4", "trs_dist": -10.679, "rot_dist": -119.298, "six_params": [ -7.644, 2.005, -7.183, -31.074, 10.399, -116.437 ], "C_alpha": [ -4.279, 7.089, -6.744 ] }, { "index": 885, "ntaa": "U-lys", "nt": "///A/2004", "aa": "///2/7", "trs_dist": -7.555, "rot_dist": -67.052, "six_params": [ -7.285, 1.108, 1.667, 26.815, -54.363, -30.138 ], "C_alpha": [ -6.754, 2.957, -1.602 ] }, { "index": 886, "ntaa": "A-asn", "nt": "///A/2006", "aa": "///2/6", "trs_dist": 8.133, "rot_dist": -139.822, "six_params": [ -2.885, 6.990, 2.992, 0.336, -0.652, -139.821 ], "C_alpha": [ 5.546, 5.114, 2.983 ] }, { "index": 887, "ntaa": "A-asn", "nt": "///A/2007", "aa": "///2/6", "trs_dist": -8.195, "rot_dist": -161.313, "six_params": [ -3.959, 7.176, -0.018, 5.832, -13.659, -161.153 ], "C_alpha": [ 6.421, 5.065, -0.139 ] }, { "index": 888, "ntaa": "A-tyr", "nt": "///A/2008", "aa": "///Q/25", "trs_dist": -8.408, "rot_dist": -168.328, "six_params": [ -3.898, 7.328, 1.342, -17.918, -49.214, -166.987 ], "C_alpha": [ 6.828, 4.658, -1.518 ] }, { "index": 889, "ntaa": "U-asn", "nt": "///A/2009", "aa": "///2/6", "trs_dist": -4.868, "rot_dist": 117.874, "six_params": [ 1.046, -4.074, -2.451, -3.111, 25.666, 116.070 ], "C_alpha": [ 3.763, -1.769, -2.528 ] }, { "index": 890, "ntaa": "G-gln", "nt": "///A/2019", "aa": "///D/150", "trs_dist": 6.100, "rot_dist": -160.005, "six_params": [ -0.154, -5.238, 3.122, -37.246, -0.855, -158.887 ], "C_alpha": [ -3.936, -0.551, 4.624 ] }, { "index": 891, "ntaa": "G-thr", "nt": "///A/2019", "aa": "///D/151", "trs_dist": 7.606, "rot_dist": -115.408, "six_params": [ -3.376, -6.678, 1.368, -53.548, -51.486, -95.825 ], "C_alpha": [ -7.133, -0.634, 2.561 ] }, { "index": 892, "ntaa": "C-his", "nt": "///A/2032", "aa": "///2/19", "trs_dist": 10.597, "rot_dist": -44.748, "six_params": [ -9.911, 0.665, 3.690, 17.004, -31.214, -27.634 ], "C_alpha": [ -10.172, 2.835, 0.961 ] }, { "index": 893, "ntaa": "G-phe", "nt": "///A/2035", "aa": "///D/118", "trs_dist": -11.391, "rot_dist": 57.987, "six_params": [ -9.868, 5.080, 2.560, -24.842, -19.388, 49.313 ], "C_alpha": [ -11.326, 0.653, -0.281 ] }, { "index": 894, "ntaa": "G-met", "nt": "///A/2036", "aa": "///D/161", "trs_dist": 9.181, "rot_dist": 174.183, "six_params": [ -0.937, 9.109, 0.667, -0.916, -19.463, 174.098 ], "C_alpha": [ -9.139, -0.559, 0.433 ] }, { "index": 895, "ntaa": "C-ile", "nt": "///A/2037", "aa": "///D/146", "trs_dist": 10.343, "rot_dist": -60.666, "six_params": [ -9.953, 1.584, 2.327, 55.799, 6.412, -23.925 ], "C_alpha": [ -9.531, 2.202, 3.327 ] }, { "index": 896, "ntaa": "C-met", "nt": "///A/2037", "aa": "///D/161", "trs_dist": -10.943, "rot_dist": 142.795, "six_params": [ 2.949, 9.872, -3.688, -16.773, -10.581, 142.210 ], "C_alpha": [ -7.656, 6.150, -4.790 ] }, { "index": 897, "ntaa": "A-gly", "nt": "///A/2039", "aa": "///D/153", "trs_dist": 8.098, "rot_dist": 71.783, "six_params": [ -4.872, 5.944, 2.550, -36.597, 12.647, 61.662 ], "C_alpha": [ -7.349, 3.207, 1.066 ] }, { "index": 898, "ntaa": "A-arg", "nt": "///A/2039", "aa": "///D/154", "trs_dist": -6.083, "rot_dist": 83.728, "six_params": [ -2.956, 3.958, -3.550, 40.460, -1.864, 74.916 ], "C_alpha": [ -5.312, 2.143, -2.014 ] }, { "index": 899, "ntaa": "A-val", "nt": "///A/2039", "aa": "///D/155", "trs_dist": -7.043, "rot_dist": 176.979, "six_params": [ 5.378, 3.178, -3.254, 9.241, 49.408, 176.662 ], "C_alpha": [ -3.392, 3.692, -4.943 ] }, { "index": 900, "ntaa": "G-gly", "nt": "///A/2040", "aa": "///D/153", "trs_dist": -10.298, "rot_dist": 54.061, "six_params": [ -1.817, 10.135, -0.143, -34.762, 24.319, 34.312 ], "C_alpha": [ -4.888, 8.623, -2.766 ] }, { "index": 901, "ntaa": "A-gln", "nt": "///A/2041", "aa": "///2/5", "trs_dist": 6.259, "rot_dist": -114.036, "six_params": [ -1.917, -5.803, 1.351, -55.030, 28.513, -101.158 ], "C_alpha": [ -4.180, -1.893, 4.244 ] }, { "index": 902, "ntaa": "G-ala", "nt": "///A/2043", "aa": "///2/2", "trs_dist": -6.898, "rot_dist": -138.669, "six_params": [ -0.072, -5.145, -4.594, -26.534, 68.936, -127.601 ], "C_alpha": [ -6.387, -0.582, -2.523 ] }, { "index": 903, "ntaa": "A-arg", "nt": "///A/2047", "aa": "///E/68", "trs_dist": 10.261, "rot_dist": 107.126, "six_params": [ 10.031, 0.209, 2.153, -83.763, -24.674, 69.633 ], "C_alpha": [ 6.378, 7.288, 3.387 ] }, { "index": 904, "ntaa": "A-asn", "nt": "///A/2077", "aa": "///X/32", "trs_dist": -8.225, "rot_dist": 77.694, "six_params": [ -7.373, 3.223, 1.701, -46.020, -31.217, 56.599 ], "C_alpha": [ -8.004, -0.656, -1.667 ] }, { "index": 905, "ntaa": "A-gln", "nt": "///A/2077", "aa": "///X/34", "trs_dist": 9.135, "rot_dist": 52.874, "six_params": [ -6.644, -2.733, 5.643, -37.132, -22.390, 31.019 ], "C_alpha": [ -7.123, -3.021, 4.831 ] }, { "index": 906, "ntaa": "A-gly", "nt": "///A/2185", "aa": "///H/24", "trs_dist": -7.282, "rot_dist": 178.971, "six_params": [ -3.761, 4.955, 3.785, -75.873, 1.720, 178.695 ], "C_alpha": [ -6.285, -3.665, -0.022 ] }, { "index": 907, "ntaa": "A-tyr", "nt": "///A/2185", "aa": "///H/25", "trs_dist": -4.800, "rot_dist": 145.224, "six_params": [ -3.108, 1.809, -3.180, 11.160, 30.901, 143.694 ], "C_alpha": [ -3.154, -2.990, -2.065 ] }, { "index": 908, "ntaa": "A-asn", "nt": "///A/2185", "aa": "///H/28", "trs_dist": -7.238, "rot_dist": 172.095, "six_params": [ 1.097, 6.843, 2.089, -74.345, -2.435, 170.073 ], "C_alpha": [ -6.599, 1.672, -2.459 ] }, { "index": 909, "ntaa": "A-phe", "nt": "///A/2185", "aa": "///H/29", "trs_dist": -5.868, "rot_dist": 145.857, "six_params": [ 2.409, 4.493, -2.906, -18.615, 35.401, 143.592 ], "C_alpha": [ -3.309, 2.452, -4.186 ] }, { "index": 910, "ntaa": "G-gln", "nt": "///A/2215", "aa": "///X/34", "trs_dist": 9.110, "rot_dist": -168.809, "six_params": [ 2.352, -8.701, -1.327, -35.072, -53.804, -166.780 ], "C_alpha": [ -8.214, -3.051, 2.454 ] }, { "index": 911, "ntaa": "U-asn", "nt": "///A/2216", "aa": "///X/32", "trs_dist": 8.402, "rot_dist": 143.187, "six_params": [ -3.530, 7.624, 0.038, 41.898, 69.474, 130.880 ], "C_alpha": [ -6.981, 0.919, 4.542 ] }, { "index": 912, "ntaa": "U-gln", "nt": "///A/2216", "aa": "///X/34", "trs_dist": -9.321, "rot_dist": 162.967, "six_params": [ 1.824, 7.944, -4.521, 37.923, 56.507, 159.413 ], "C_alpha": [ -8.894, 1.751, -2.109 ] }, { "index": 913, "ntaa": "G-asn", "nt": "///A/2217", "aa": "///X/32", "trs_dist": -8.711, "rot_dist": 105.398, "six_params": [ 1.979, 7.169, -4.536, 37.650, 34.415, 95.645 ], "C_alpha": [ -5.531, 6.264, -2.393 ] }, { "index": 914, "ntaa": "G-met", "nt": "///A/2237", "aa": "///M/83", "trs_dist": 5.991, "rot_dist": 76.528, "six_params": [ 2.283, 3.871, 3.962, 25.708, -23.971, 69.105 ], "C_alpha": [ -0.522, 3.096, 5.092 ] }, { "index": 915, "ntaa": "G-gly", "nt": "///A/2237", "aa": "///M/84", "trs_dist": 6.331, "rot_dist": 125.725, "six_params": [ 2.976, -1.655, 5.338, -37.595, 51.972, 114.867 ], "C_alpha": [ 2.834, 4.241, 3.806 ] }, { "index": 916, "ntaa": "G-arg", "nt": "///A/2242", "aa": "///W/11", "trs_dist": 11.121, "rot_dist": 30.890, "six_params": [ -9.227, -0.982, 6.130, 3.514, 10.934, 28.724 ], "C_alpha": [ -8.031, -3.277, 6.927 ] }, { "index": 917, "ntaa": "C-arg", "nt": "///A/2247", "aa": "///W/14", "trs_dist": 7.302, "rot_dist": -118.510, "six_params": [ 0.700, 6.954, 2.113, 25.945, 25.212, -114.932 ], "C_alpha": [ 6.050, 2.257, 3.446 ] }, { "index": 918, "ntaa": "C-arg", "nt": "///A/2248", "aa": "///W/14", "trs_dist": 6.280, "rot_dist": -145.863, "six_params": [ 1.188, 6.018, -1.348, 53.783, 14.077, -141.243 ], "C_alpha": [ 6.041, 0.831, 1.414 ] }, { "index": 919, "ntaa": "C-asp", "nt": "///A/2248", "aa": "///W/15", "trs_dist": 6.633, "rot_dist": -141.459, "six_params": [ -1.697, 6.355, 0.855, 57.014, 51.750, -130.117 ], "C_alpha": [ 4.341, 2.568, 4.335 ] }, { "index": 920, "ntaa": "C-ser", "nt": "///A/2248", "aa": "///W/16", "trs_dist": 7.851, "rot_dist": 175.762, "six_params": [ 5.566, -2.764, 4.799, -3.880, 16.070, 175.717 ], "C_alpha": [ 2.824, 6.094, 4.063 ] }, { "index": 921, "ntaa": "U-arg", "nt": "///A/2249", "aa": "///W/14", "trs_dist": -7.087, "rot_dist": -161.813, "six_params": [ 1.288, 5.568, -4.191, 65.803, -5.071, -158.275 ], "C_alpha": [ 7.030, -0.087, -0.410 ] }, { "index": 922, "ntaa": "U-asp", "nt": "///A/2249", "aa": "///W/15", "trs_dist": 6.415, "rot_dist": -150.821, "six_params": [ -0.466, 5.976, -2.284, 74.087, 31.149, -141.497 ], "C_alpha": [ 5.580, 2.514, 1.950 ] }, { "index": 923, "ntaa": "U-ser", "nt": "///A/2249", "aa": "///W/16", "trs_dist": 8.517, "rot_dist": 152.113, "six_params": [ 7.170, -4.114, 2.050, -13.722, 21.028, 151.415 ], "C_alpha": [ 5.628, 6.283, 1.179 ] }, { "index": 924, "ntaa": "C-asp", "nt": "///A/2250", "aa": "///W/15", "trs_dist": -6.763, "rot_dist": -162.890, "six_params": [ -0.440, 4.102, -5.360, 85.889, 12.468, -156.374 ], "C_alpha": [ 6.322, 2.166, -1.040 ] }, { "index": 925, "ntaa": "C-asp", "nt": "///A/2251", "aa": "///W/15", "trs_dist": -6.679, "rot_dist": 165.727, "six_params": [ 0.695, -6.488, 1.424, 70.682, -9.458, 162.410 ], "C_alpha": [ 6.175, -0.186, -2.515 ] }, { "index": 926, "ntaa": "U-asp", "nt": "///A/2252", "aa": "///W/15", "trs_dist": 8.353, "rot_dist": -62.372, "six_params": [ 8.136, 1.488, 1.167, -15.402, -54.704, -26.847 ], "C_alpha": [ 6.975, 0.255, 4.541 ] }, { "index": 927, "ntaa": "C-lys", "nt": "///A/2262", "aa": "///M/85", "trs_dist": 7.874, "rot_dist": 106.867, "six_params": [ -3.439, 6.668, -2.389, 50.369, 72.614, 67.635 ], "C_alpha": [ -6.367, 3.614, 2.909 ] }, { "index": 928, "ntaa": "G-met", "nt": "///A/2263", "aa": "///M/13", "trs_dist": -11.570, "rot_dist": 160.968, "six_params": [ -0.195, 8.782, -7.530, 63.222, 44.419, 155.564 ], "C_alpha": [ -11.476, 0.460, -1.320 ] }, { "index": 929, "ntaa": "G-asn", "nt": "///A/2264", "aa": "///W/12", "trs_dist": 7.294, "rot_dist": 29.404, "six_params": [ 4.956, 4.481, 2.925, 25.043, 13.092, 8.211 ], "C_alpha": [ 5.006, 4.173, 3.234 ] }, { "index": 930, "ntaa": "G-gly", "nt": "///A/2264", "aa": "///W/13", "trs_dist": 7.323, "rot_dist": 65.592, "six_params": [ 6.788, 2.747, -0.019, 61.503, 22.571, 3.404 ], "C_alpha": [ 6.718, 2.930, 0.103 ] }, { "index": 931, "ntaa": "A-asn", "nt": "///A/2265", "aa": "///W/12", "trs_dist": 8.380, "rot_dist": -19.590, "six_params": [ 5.136, 6.610, -0.383, 18.346, -5.480, -4.160 ], "C_alpha": [ 5.344, 6.378, 0.905 ] }, { "index": 932, "ntaa": "A-arg", "nt": "///A/2265", "aa": "///W/14", "trs_dist": -7.422, "rot_dist": -79.979, "six_params": [ 6.045, 0.982, 4.192, 3.451, 79.709, -6.121 ], "C_alpha": [ 7.327, 0.559, -0.640 ] }, { "index": 933, "ntaa": "G-arg", "nt": "///A/2266", "aa": "///W/14", "trs_dist": -6.405, "rot_dist": -78.695, "six_params": [ 6.238, 1.401, 0.394, 14.222, 69.194, -37.202 ], "C_alpha": [ 5.597, -0.195, -3.069 ] }, { "index": 934, "ntaa": "G-arg", "nt": "///A/2267", "aa": "///W/14", "trs_dist": -6.968, "rot_dist": -92.333, "six_params": [ 6.105, 0.282, -3.348, 25.834, 55.250, -73.021 ], "C_alpha": [ 3.906, -1.206, -5.660 ] }, { "index": 935, "ntaa": "C-arg", "nt": "///A/2272", "aa": "///3/2", "trs_dist": 11.135, "rot_dist": 91.741, "six_params": [ 9.864, 5.086, -0.903, -48.608, -72.762, 30.871 ], "C_alpha": [ 7.316, 7.800, 3.060 ] }, { "index": 936, "ntaa": "G-thr", "nt": "///A/2273", "aa": "///3/19", "trs_dist": 6.713, "rot_dist": 172.146, "six_params": [ -0.785, -6.623, 0.772, 6.327, 53.490, 171.189 ], "C_alpha": [ 6.593, -0.941, 0.683 ] }, { "index": 937, "ntaa": "G-ile", "nt": "///A/2273", "aa": "///3/32", "trs_dist": 7.464, "rot_dist": -75.150, "six_params": [ -5.961, 0.786, 4.422, 49.310, 48.416, -31.563 ], "C_alpha": [ -3.914, -0.561, 6.319 ] }, { "index": 938, "ntaa": "C-arg", "nt": "///A/2282", "aa": "///O/10", "trs_dist": 11.373, "rot_dist": 27.742, "six_params": [ 6.728, 7.511, 5.260, 25.582, 8.940, 5.992 ], "C_alpha": [ 6.837, 6.583, 6.251 ] }, { "index": 939, "ntaa": "U-arg", "nt": "///A/2283", "aa": "///O/10", "trs_dist": 11.304, "rot_dist": -20.000, "six_params": [ 8.599, 7.249, 1.128, 12.973, 3.610, -14.821 ], "C_alpha": [ 9.478, 5.915, 1.666 ] }, { "index": 940, "ntaa": "C-asp", "nt": "///A/2289", "aa": "///F/123", "trs_dist": 7.871, "rot_dist": 141.815, "six_params": [ 0.131, 7.456, -2.518, 49.854, 34.721, 135.438 ], "C_alpha": [ -7.271, 2.843, 0.878 ] }, { "index": 941, "ntaa": "G-ser", "nt": "///A/2290", "aa": "///F/129", "trs_dist": 9.046, "rot_dist": -38.119, "six_params": [ -8.797, 1.735, 1.194, -35.331, 6.756, -12.827 ], "C_alpha": [ -8.431, 3.048, 1.110 ] }, { "index": 942, "ntaa": "U-gly", "nt": "///A/2292", "aa": "///F/39", "trs_dist": -4.007, "rot_dist": 104.526, "six_params": [ 1.824, -2.855, -2.139, -22.840, -65.501, 83.801 ], "C_alpha": [ 3.935, -0.636, -0.252 ] }, { "index": 943, "ntaa": "U-gly", "nt": "///A/2292", "aa": "///F/151", "trs_dist": -2.404, "rot_dist": -173.829, "six_params": [ 0.019, -2.404, -0.036, 69.719, -18.911, -172.358 ], "C_alpha": [ -1.939, -0.274, -1.396 ] }, { "index": 944, "ntaa": "U-leu", "nt": "///A/2292", "aa": "///F/152", "trs_dist": -4.842, "rot_dist": 109.321, "six_params": [ -0.476, -2.092, -4.340, 78.641, -15.936, 81.704 ], "C_alpha": [ -0.611, 0.977, -4.709 ] }, { "index": 945, "ntaa": "U-asp", "nt": "///A/2292", "aa": "///F/153", "trs_dist": -7.266, "rot_dist": -170.093, "six_params": [ -5.226, -0.404, -5.032, 39.577, -24.788, -169.207 ], "C_alpha": [ 1.120, 4.161, -5.846 ] }, { "index": 946, "ntaa": "C-gly", "nt": "///A/2293", "aa": "///F/39", "trs_dist": 6.136, "rot_dist": -88.831, "six_params": [ 3.958, 2.017, 4.233, -35.231, 48.633, -68.822 ], "C_alpha": [ 5.926, -0.543, 1.449 ] }, { "index": 947, "ntaa": "C-glu", "nt": "///A/2293", "aa": "///F/42", "trs_dist": 4.260, "rot_dist": -84.479, "six_params": [ 1.063, -3.102, 2.719, -37.265, -42.473, -65.622 ], "C_alpha": [ -1.242, -1.609, 3.739 ] }, { "index": 948, "ntaa": "C-gly", "nt": "///A/2293", "aa": "///F/151", "trs_dist": -5.356, "rot_dist": 151.187, "six_params": [ 1.954, -4.501, -2.148, 57.375, -19.706, 146.492 ], "C_alpha": [ 3.592, 1.493, -3.684 ] }, { "index": 949, "ntaa": "G-gly", "nt": "///A/2294", "aa": "///F/41", "trs_dist": 6.070, "rot_dist": -131.828, "six_params": [ -1.194, -4.942, 3.316, 14.768, 4.698, -131.355 ], "C_alpha": [ -5.299, -1.230, 2.681 ] }, { "index": 950, "ntaa": "G-glu", "nt": "///A/2294", "aa": "///F/42", "trs_dist": -6.529, "rot_dist": -102.291, "six_params": [ -4.622, -4.479, 1.096, 79.195, 28.970, -64.365 ], "C_alpha": [ -6.304, -1.379, -0.957 ] }, { "index": 951, "ntaa": "A-gly", "nt": "///A/2297", "aa": "///F/76", "trs_dist": 2.927, "rot_dist": 107.398, "six_params": [ -2.391, -1.657, 0.320, -28.296, 44.265, 97.369 ], "C_alpha": [ -0.269, -2.450, 1.589 ] }, { "index": 952, "ntaa": "A-phe", "nt": "///A/2297", "aa": "///F/77", "trs_dist": 4.654, "rot_dist": 115.037, "six_params": [ 1.916, -1.189, 4.071, 1.205, -42.802, 109.544 ], "C_alpha": [ 1.179, -0.463, 4.483 ] }, { "index": 953, "ntaa": "A-gly", "nt": "///A/2298", "aa": "///F/41", "trs_dist": 4.873, "rot_dist": 95.039, "six_params": [ -3.395, 3.159, 1.496, 66.101, 50.092, 51.349 ], "C_alpha": [ -2.520, 0.384, 4.157 ] }, { "index": 954, "ntaa": "A-val", "nt": "///A/2298", "aa": "///F/44", "trs_dist": 6.528, "rot_dist": -117.314, "six_params": [ 0.296, -6.337, -1.540, -43.719, -36.326, -107.482 ], "C_alpha": [ -4.966, -4.104, 1.047 ] }, { "index": 955, "ntaa": "A-phe", "nt": "///A/2298", "aa": "///F/77", "trs_dist": -5.034, "rot_dist": -83.730, "six_params": [ 2.004, 3.229, -3.301, -48.597, 63.471, -27.313 ], "C_alpha": [ 0.004, 1.477, -4.808 ] }, { "index": 956, "ntaa": "U-gly", "nt": "///A/2299", "aa": "///F/39", "trs_dist": -6.378, "rot_dist": 158.323, "six_params": [ 0.333, 6.129, -1.730, 16.131, 45.729, 156.197 ], "C_alpha": [ -6.241, 1.103, -0.872 ] }, { "index": 957, "ntaa": "C-thr", "nt": "///A/2300", "aa": "///F/155", "trs_dist": 9.542, "rot_dist": 57.446, "six_params": [ -8.545, 2.235, 3.611, -51.733, -20.122, 15.418 ], "C_alpha": [ -9.279, 2.013, 0.784 ] }, { "index": 958, "ntaa": "G-asp", "nt": "///A/2301", "aa": "///F/123", "trs_dist": -7.884, "rot_dist": 72.121, "six_params": [ -7.568, 0.249, 2.197, -29.939, -52.497, 41.379 ], "C_alpha": [ -7.350, -2.402, -1.466 ] }, { "index": 959, "ntaa": "G-arg", "nt": "///A/2317", "aa": "///W/41", "trs_dist": -8.596, "rot_dist": 65.859, "six_params": [ -4.382, 6.715, -3.099, 6.712, 30.775, 58.598 ], "C_alpha": [ -7.700, 3.522, -1.470 ] }, { "index": 960, "ntaa": "G-gly", "nt": "///A/2317", "aa": "///W/42", "trs_dist": 6.824, "rot_dist": 60.083, "six_params": [ -6.538, 1.140, 1.587, -58.145, 12.153, 9.464 ], "C_alpha": [ -6.529, 1.431, 1.495 ] }, { "index": 961, "ntaa": "A-arg", "nt": "///A/2320", "aa": "///O/13", "trs_dist": 15.348, "rot_dist": -103.229, "six_params": [ -12.433, 7.272, -5.302, 27.785, 33.226, -96.157 ], "C_alpha": [ -2.910, 15.057, 0.320 ] }, { "index": 962, "ntaa": "A-lys", "nt": "///A/2321", "aa": "///O/14", "trs_dist": -7.717, "rot_dist": 49.230, "six_params": [ -2.690, 6.748, -2.603, -32.806, 30.421, 21.090 ], "C_alpha": [ -4.543, 5.109, -3.592 ] }, { "index": 963, "ntaa": "A-leu", "nt": "///A/2321", "aa": "///O/17", "trs_dist": -7.116, "rot_dist": 90.357, "six_params": [ -0.146, 1.781, -6.888, 19.187, -47.008, 77.435 ], "C_alpha": [ 0.177, 3.830, -5.989 ] }, { "index": 964, "ntaa": "A-lys", "nt": "///A/2321", "aa": "///O/18", "trs_dist": -4.857, "rot_dist": 39.818, "six_params": [ 0.854, 0.951, -4.686, -14.394, 28.995, 23.502 ], "C_alpha": [ -0.428, 0.263, -4.835 ] }, { "index": 965, "ntaa": "A-thr", "nt": "///A/2323", "aa": "///W/43", "trs_dist": -5.409, "rot_dist": 81.351, "six_params": [ -1.832, -5.052, -0.619, 0.618, -15.316, 80.141 ], "C_alpha": [ 1.921, -4.971, -0.865 ] }, { "index": 966, "ntaa": "A-his", "nt": "///A/2323", "aa": "///W/57", "trs_dist": -7.350, "rot_dist": 105.185, "six_params": [ 2.178, 0.700, -6.985, -54.005, 67.781, 66.735 ], "C_alpha": [ -0.243, -3.336, -6.534 ] }, { "index": 967, "ntaa": "C-tyr", "nt": "///A/2334", "aa": "///3/35", "trs_dist": 8.829, "rot_dist": -38.690, "six_params": [ -8.460, 1.781, 1.795, -31.997, -13.526, -17.303 ], "C_alpha": [ -8.168, 3.329, 0.243 ] }, { "index": 968, "ntaa": "C-his", "nt": "///A/2334", "aa": "///3/42", "trs_dist": -10.665, "rot_dist": -161.681, "six_params": [ -3.273, -8.065, -6.162, -51.080, -13.940, -159.513 ], "C_alpha": [ -10.340, 0.918, -2.435 ] }, { "index": 969, "ntaa": "U-tyr", "nt": "///A/2335", "aa": "///3/35", "trs_dist": -10.825, "rot_dist": -67.082, "six_params": [ -7.828, 6.740, -3.236, -26.812, -34.281, -52.353 ], "C_alpha": [ -3.211, 7.754, -6.827 ] }, { "index": 970, "ntaa": "G-arg", "nt": "///A/2336", "aa": "///5/41", "trs_dist": 12.253, "rot_dist": -108.642, "six_params": [ -6.926, 9.970, 1.666, 20.765, 57.095, -94.928 ], "C_alpha": [ 3.517, 9.806, 6.453 ] }, { "index": 971, "ntaa": "C-arg", "nt": "///A/2337", "aa": "///5/41", "trs_dist": 12.817, "rot_dist": -117.240, "six_params": [ -7.620, 10.002, -2.487, 35.419, 40.428, -108.569 ], "C_alpha": [ 3.658, 11.815, 3.356 ] }, { "index": 972, "ntaa": "G-lys", "nt": "///A/2338", "aa": "///5/38", "trs_dist": -6.696, "rot_dist": -141.931, "six_params": [ 2.550, 5.833, 2.074, -38.398, 24.624, -138.560 ], "C_alpha": [ 6.661, -0.388, -0.522 ] }, { "index": 973, "ntaa": "G-arg", "nt": "///A/2338", "aa": "///5/41", "trs_dist": -10.418, "rot_dist": -165.648, "six_params": [ -3.607, 8.231, -5.270, 42.929, 7.103, -164.540 ], "C_alpha": [ 8.944, 5.068, -1.661 ] }, { "index": 974, "ntaa": "G-gln", "nt": "///A/2338", "aa": "///5/42", "trs_dist": 9.824, "rot_dist": -151.354, "six_params": [ -4.146, 7.616, 4.618, -51.979, 38.567, -145.940 ], "C_alpha": [ 7.872, 5.547, 1.956 ] }, { "index": 975, "ntaa": "A-ala", "nt": "///A/2339", "aa": "///W/33", "trs_dist": 5.413, "rot_dist": 100.677, "six_params": [ -5.227, 0.760, -1.182, 21.358, 72.748, 72.013 ], "C_alpha": [ -4.315, -2.326, 2.279 ] }, { "index": 976, "ntaa": "A-gly", "nt": "///A/2339", "aa": "///W/34", "trs_dist": 3.423, "rot_dist": 67.574, "six_params": [ -2.051, -1.934, 1.941, -17.176, 24.563, 61.283 ], "C_alpha": [ -0.547, -2.165, 2.628 ] }, { "index": 977, "ntaa": "G-gly", "nt": "///A/2340", "aa": "///W/34", "trs_dist": -6.872, "rot_dist": -25.961, "six_params": [ -5.777, 2.732, -2.527, -10.029, 23.946, -0.160 ], "C_alpha": [ -6.206, 2.581, -1.474 ] }, { "index": 978, "ntaa": "G-ile", "nt": "///A/2340", "aa": "///W/36", "trs_dist": 8.332, "rot_dist": -42.816, "six_params": [ -5.554, -3.893, 4.838, -5.246, -30.962, -29.478 ], "C_alpha": [ -7.375, -1.902, 3.349 ] }, { "index": 979, "ntaa": "A-ile", "nt": "///A/2341", "aa": "///W/36", "trs_dist": -9.559, "rot_dist": -71.117, "six_params": [ -9.306, -0.462, 2.137, -19.914, -30.071, -62.359 ], "C_alpha": [ -8.322, 4.666, -0.292 ] }, { "index": 980, "ntaa": "C-arg", "nt": "///A/2342", "aa": "///W/39", "trs_dist": -12.935, "rot_dist": -63.839, "six_params": [ -11.427, 3.879, 4.657, -4.059, -54.035, -35.115 ], "C_alpha": [ -10.481, 7.415, -1.183 ] }, { "index": 981, "ntaa": "A-glu", "nt": "///A/2345", "aa": "///L/51", "trs_dist": -8.423, "rot_dist": -176.527, "six_params": [ 5.793, -5.924, -1.517, 56.375, -32.085, -175.885 ], "C_alpha": [ -4.674, -6.549, -2.507 ] }, { "index": 982, "ntaa": "A-gln", "nt": "///A/2345", "aa": "///L/54", "trs_dist": -6.784, "rot_dist": 120.867, "six_params": [ -4.753, -4.833, 0.271, -43.619, -57.459, 104.755 ], "C_alpha": [ 0.944, -6.700, -0.279 ] }, { "index": 983, "ntaa": "C-gln", "nt": "///A/2346", "aa": "///L/54", "trs_dist": -8.205, "rot_dist": 100.840, "six_params": [ -8.036, 1.231, -1.111, -77.370, -41.453, 55.725 ], "C_alpha": [ -5.896, -3.856, -4.170 ] }, { "index": 984, "ntaa": "C-arg", "nt": "///A/2346", "aa": "///L/60", "trs_dist": 11.658, "rot_dist": 77.498, "six_params": [ -10.728, -0.793, 4.493, -68.432, 7.860, 37.950 ], "C_alpha": [ -10.527, -1.404, 4.834 ] }, { "index": 985, "ntaa": "A-arg", "nt": "///A/2347", "aa": "///L/60", "trs_dist": -12.514, "rot_dist": -73.091, "six_params": [ -10.902, 6.094, 0.790, -67.688, 26.109, -9.571 ], "C_alpha": [ -10.307, 7.111, -0.417 ] }, { "index": 986, "ntaa": "U-arg", "nt": "///A/2350", "aa": "///W/39", "trs_dist": 12.183, "rot_dist": 175.313, "six_params": [ 1.025, 10.489, -6.113, 60.130, -17.826, 174.511 ], "C_alpha": [ -11.959, 2.095, 0.166 ] }, { "index": 987, "ntaa": "C-ile", "nt": "///A/2351", "aa": "///W/36", "trs_dist": -9.234, "rot_dist": -152.971, "six_params": [ -3.998, -6.614, -5.054, -31.174, -6.457, -151.872 ], "C_alpha": [ -8.424, 1.778, -3.304 ] }, { "index": 988, "ntaa": "G-lys", "nt": "///A/2352", "aa": "///5/38", "trs_dist": 8.268, "rot_dist": -63.054, "six_params": [ 6.639, 4.924, 0.203, 13.916, -30.715, -54.082 ], "C_alpha": [ 7.743, 1.389, 2.534 ] }, { "index": 989, "ntaa": "G-gln", "nt": "///A/2352", "aa": "///5/42", "trs_dist": 8.499, "rot_dist": -69.801, "six_params": [ 7.881, -1.755, -2.655, 26.773, -45.480, -47.435 ], "C_alpha": [ 7.079, -4.702, 0.235 ] }, { "index": 990, "ntaa": "G-tyr", "nt": "///A/2357", "aa": "///3/35", "trs_dist": 8.253, "rot_dist": -150.767, "six_params": [ 2.153, -7.963, 0.266, -43.866, -9.477, -148.311 ], "C_alpha": [ -6.431, -3.898, 3.387 ] }, { "index": 991, "ntaa": "G-his", "nt": "///A/2358", "aa": "///3/42", "trs_dist": 11.230, "rot_dist": -71.538, "six_params": [ -10.200, -0.657, 4.653, -20.158, -25.706, -64.548 ], "C_alpha": [ -9.310, 5.829, 2.323 ] }, { "index": 992, "ntaa": "A-phe", "nt": "///A/2363", "aa": "///O/91", "trs_dist": -4.754, "rot_dist": 121.271, "six_params": [ -3.580, -1.860, -2.516, 20.647, 63.845, 107.914 ], "C_alpha": [ -1.345, -4.511, -0.533 ] }, { "index": 993, "ntaa": "A-arg", "nt": "///A/2363", "aa": "///O/93", "trs_dist": -6.017, "rot_dist": 116.874, "six_params": [ 1.211, -5.880, -0.409, 65.072, 48.309, 92.962 ], "C_alpha": [ 3.549, -2.984, -3.843 ] }, { "index": 994, "ntaa": "A-tyr", "nt": "///A/2363", "aa": "///O/98", "trs_dist": -7.377, "rot_dist": -130.939, "six_params": [ -3.714, 6.120, -1.782, -45.017, -67.226, -113.866 ], "C_alpha": [ 3.045, 3.739, -5.566 ] }, { "index": 995, "ntaa": "A-arg", "nt": "///A/2363", "aa": "///O/110", "trs_dist": -12.070, "rot_dist": -115.453, "six_params": [ -4.688, -9.356, -6.014, -3.955, 44.891, -109.367 ], "C_alpha": [ -11.565, -0.143, -3.452 ] }, { "index": 996, "ntaa": "A-met", "nt": "///A/2365", "aa": "///O/19", "trs_dist": 7.252, "rot_dist": -156.995, "six_params": [ -2.165, -4.242, 5.470, 78.428, 41.180, -147.649 ], "C_alpha": [ -6.866, -1.213, 1.993 ] }, { "index": 997, "ntaa": "G-arg", "nt": "///A/2369", "aa": "///5/41", "trs_dist": 11.894, "rot_dist": 39.624, "six_params": [ -11.490, -3.041, 0.462, -16.993, 34.940, 7.929 ], "C_alpha": [ -10.543, -3.413, 4.319 ] }, { "index": 998, "ntaa": "U-arg", "nt": "///A/2373", "aa": "///W/41", "trs_dist": -8.043, "rot_dist": 95.842, "six_params": [ -4.007, 6.968, 0.295, -26.606, 10.270, 92.508 ], "C_alpha": [ -7.754, 1.852, -0.924 ] }, { "index": 999, "ntaa": "A-gln", "nt": "///A/2379", "aa": "///L/55", "trs_dist": -7.452, "rot_dist": 91.629, "six_params": [ -7.281, 1.459, -0.632, -69.177, -56.996, 21.446 ], "C_alpha": [ -5.786, -1.279, -4.492 ] }, { "index": 1000, "ntaa": "A-arg", "nt": "///A/2379", "aa": "///L/59", "trs_dist": 7.845, "rot_dist": 123.319, "six_params": [ -4.361, 5.762, 3.053, 9.768, -37.433, 119.588 ], "C_alpha": [ -7.402, -1.702, 1.953 ] }, { "index": 1001, "ntaa": "U-arg", "nt": "///A/2385", "aa": "///3/6", "trs_dist": -12.558, "rot_dist": 61.992, "six_params": [ -11.749, 2.062, 3.927, -32.802, -42.651, 32.013 ], "C_alpha": [ -12.433, -1.030, -1.269 ] }, { "index": 1002, "ntaa": "G-phe", "nt": "///A/2401", "aa": "///L/66", "trs_dist": 9.677, "rot_dist": -153.202, "six_params": [ -2.544, -8.849, 2.979, -28.236, -62.293, -147.459 ], "C_alpha": [ -8.921, 1.863, 3.203 ] }, { "index": 1003, "ntaa": "A-phe", "nt": "///A/2405", "aa": "///3/16", "trs_dist": 11.968, "rot_dist": -101.837, "six_params": [ -11.024, -2.796, -3.726, -50.177, 29.541, -87.628 ], "C_alpha": [ -10.661, 5.386, 0.636 ] }, { "index": 1004, "ntaa": "U-leu", "nt": "///A/2406", "aa": "///5/32", "trs_dist": 10.357, "rot_dist": 154.903, "six_params": [ 8.505, 4.847, 3.383, 76.536, -3.944, 147.847 ], "C_alpha": [ 0.739, 8.456, 5.935 ] }, { "index": 1005, "ntaa": "C-lys", "nt": "///A/2407", "aa": "///3/51", "trs_dist": -12.052, "rot_dist": 56.836, "six_params": [ -5.069, 6.991, -8.406, 23.357, 49.199, 16.916 ], "C_alpha": [ -8.926, 7.056, -4.010 ] }, { "index": 1006, "ntaa": "C-his", "nt": "///A/2407", "aa": "///5/30", "trs_dist": 6.358, "rot_dist": -104.500, "six_params": [ -1.414, 4.594, 4.162, -31.811, -7.470, -100.717 ], "C_alpha": [ 3.265, 4.813, 2.665 ] }, { "index": 1007, "ntaa": "G-his", "nt": "///A/2408", "aa": "///5/30", "trs_dist": -6.237, "rot_dist": -142.357, "six_params": [ -1.356, 5.908, 1.466, -28.958, -13.352, -140.791 ], "C_alpha": [ 5.272, 3.376, -0.191 ] }, { "index": 1008, "ntaa": "C-his", "nt": "///A/2409", "aa": "///5/30", "trs_dist": -9.700, "rot_dist": -155.283, "six_params": [ -3.254, 7.862, -4.657, -14.046, -9.354, -155.008 ], "C_alpha": [ 6.461, 4.304, -5.796 ] }, { "index": 1009, "ntaa": "G-gln", "nt": "///A/2415", "aa": "///L/54", "trs_dist": 8.244, "rot_dist": -96.064, "six_params": [ -4.438, 4.529, 5.268, 70.303, -35.070, -60.478 ], "C_alpha": [ -4.723, 4.059, 5.373 ] }, { "index": 1010, "ntaa": "G-arg", "nt": "///A/2415", "aa": "///L/60", "trs_dist": -11.544, "rot_dist": 156.309, "six_params": [ -0.156, 11.120, -3.098, 2.439, 76.809, 149.621 ], "C_alpha": [ -11.318, 1.021, -2.098 ] }, { "index": 1011, "ntaa": "G-gln", "nt": "///A/2416", "aa": "///L/55", "trs_dist": -8.150, "rot_dist": 102.182, "six_params": [ 7.982, 1.629, -0.236, -84.308, 1.116, 64.166 ], "C_alpha": [ 6.205, 5.106, -1.324 ] }, { "index": 1012, "ntaa": "A-ala", "nt": "///A/2419", "aa": "///X/21", "trs_dist": 5.934, "rot_dist": -84.553, "six_params": [ 4.224, 4.134, -0.525, -29.504, -64.808, -48.982 ], "C_alpha": [ 5.498, 2.084, 0.803 ] }, { "index": 1013, "ntaa": "A-ala", "nt": "///A/2420", "aa": "///X/21", "trs_dist": -5.433, "rot_dist": 114.418, "six_params": [ -4.685, -0.897, -2.601, 43.007, -43.144, 102.153 ], "C_alpha": [ -2.444, -2.352, -4.235 ] }, { "index": 1014, "ntaa": "A-leu", "nt": "///A/2446", "aa": "///M/79", "trs_dist": -8.108, "rot_dist": 112.289, "six_params": [ -3.732, 5.898, -4.125, -32.486, 79.690, 80.702 ], "C_alpha": [ -7.812, -0.123, -2.171 ] }, { "index": 1015, "ntaa": "C-lys", "nt": "///A/2454", "aa": "///M/124", "trs_dist": -8.401, "rot_dist": 66.167, "six_params": [ -2.926, 2.969, -7.294, 22.062, 50.660, 37.935 ], "C_alpha": [ -6.672, 2.102, -4.670 ] }, { "index": 1016, "ntaa": "U-arg", "nt": "///A/2464", "aa": "///6/4", "trs_dist": 9.288, "rot_dist": 76.985, "six_params": [ -8.221, -1.936, 3.865, 76.251, 7.299, 8.365 ], "C_alpha": [ -7.697, -4.634, 2.322 ] }, { "index": 1017, "ntaa": "U-leu", "nt": "///A/2464", "aa": "///6/10", "trs_dist": 7.060, "rot_dist": 146.559, "six_params": [ 0.135, -4.237, 5.646, 22.690, 26.974, 144.859 ], "C_alpha": [ 5.416, -0.309, 4.536 ] }, { "index": 1018, "ntaa": "A-arg", "nt": "///A/2465", "aa": "///6/32", "trs_dist": -14.429, "rot_dist": 120.832, "six_params": [ 7.873, 11.029, -4.957, -34.200, -75.616, 97.532 ], "C_alpha": [ -0.703, 14.285, -1.973 ] }, { "index": 1019, "ntaa": "C-lys", "nt": "///A/2470", "aa": "///M/124", "trs_dist": 6.319, "rot_dist": 155.767, "six_params": [ -1.499, 0.215, 6.135, -40.672, -23.840, 153.522 ], "C_alpha": [ -2.827, -2.123, 5.248 ] }, { "index": 1020, "ntaa": "G-ala", "nt": "///A/2471", "aa": "///M/123", "trs_dist": -8.627, "rot_dist": 119.786, "six_params": [ -5.710, 6.354, 1.203, 13.535, -70.634, 103.409 ], "C_alpha": [ -8.465, -0.416, -1.624 ] }, { "index": 1021, "ntaa": "G-lys", "nt": "///A/2471", "aa": "///M/124", "trs_dist": -7.970, "rot_dist": 124.827, "six_params": [ -1.412, 6.706, 4.070, -68.994, -11.880, 111.146 ], "C_alpha": [ -7.338, 3.078, -0.596 ] }, { "index": 1022, "ntaa": "U-gly", "nt": "///A/2498", "aa": "///D/144", "trs_dist": 6.376, "rot_dist": 58.914, "six_params": [ -4.987, 3.838, -1.028, 51.894, -7.714, 27.810 ], "C_alpha": [ -5.780, 2.661, 0.435 ] }, { "index": 1023, "ntaa": "U-ser", "nt": "///A/2498", "aa": "///D/145", "trs_dist": 4.988, "rot_dist": -29.387, "six_params": [ -4.605, -1.873, 0.410, -13.076, 14.051, -22.358 ], "C_alpha": [ -4.759, -0.882, 1.168 ] }, { "index": 1024, "ntaa": "C-ser", "nt": "///A/2499", "aa": "///D/145", "trs_dist": -7.755, "rot_dist": -65.005, "six_params": [ -6.709, 0.342, -3.873, -11.342, 6.595, -63.809 ], "C_alpha": [ -5.885, 3.626, -3.505 ] }, { "index": 1025, "ntaa": "A-gln", "nt": "///A/2500", "aa": "///D/148", "trs_dist": -7.810, "rot_dist": 92.546, "six_params": [ -1.885, 1.941, -7.326, 10.804, 78.344, 52.634 ], "C_alpha": [ -6.505, -0.426, -4.284 ] }, { "index": 1026, "ntaa": "U-gln", "nt": "///A/2501", "aa": "///D/148", "trs_dist": -10.039, "rot_dist": 78.161, "six_params": [ 1.236, 1.868, -9.786, 30.285, 71.369, 10.813 ], "C_alpha": [ -4.871, 3.845, -7.877 ] }, { "index": 1027, "ntaa": "G-met", "nt": "///A/2513", "aa": "///6/1", "trs_dist": -8.459, "rot_dist": -100.821, "six_params": [ -7.222, -2.320, 3.745, -27.218, -68.249, -74.645 ], "C_alpha": [ -7.701, 3.465, -0.502 ] }, { "index": 1028, "ntaa": "G-arg", "nt": "///A/2516", "aa": "///6/32", "trs_dist": -11.063, "rot_dist": 74.168, "six_params": [ 10.558, 2.881, -1.620, -69.964, -13.450, 22.134 ], "C_alpha": [ 10.227, 3.823, -1.809 ] }, { "index": 1029, "ntaa": "A-pro", "nt": "///A/2517", "aa": "///G/156", "trs_dist": 6.336, "rot_dist": 116.114, "six_params": [ 0.866, -6.009, 1.813, -67.813, 7.016, 100.589 ], "C_alpha": [ 3.773, -1.721, 4.839 ] }, { "index": 1030, "ntaa": "A-tyr", "nt": "///A/2517", "aa": "///G/157", "trs_dist": 7.795, "rot_dist": 165.571, "six_params": [ 3.895, -3.161, 5.967, -23.023, -58.422, 163.079 ], "C_alpha": [ 1.800, 0.075, 7.586 ] }, { "index": 1031, "ntaa": "A-lys", "nt": "///A/2517", "aa": "///G/172", "trs_dist": 9.315, "rot_dist": 163.198, "six_params": [ 4.389, -8.215, 0.146, -76.364, -17.198, 158.285 ], "C_alpha": [ 6.790, 2.699, 5.757 ] }, { "index": 1032, "ntaa": "U-lys", "nt": "///A/2535", "aa": "///K/23", "trs_dist": -9.444, "rot_dist": 152.122, "six_params": [ -0.073, 7.533, -5.696, 35.259, 26.540, 149.869 ], "C_alpha": [ -8.849, 1.253, -3.002 ] }, { "index": 1033, "ntaa": "U-lys", "nt": "///A/2548", "aa": "///K/23", "trs_dist": 10.592, "rot_dist": 35.853, "six_params": [ -8.935, 4.342, 3.675, -34.049, -10.781, 3.194 ], "C_alpha": [ -9.299, 4.837, 1.398 ] }, { "index": 1034, "ntaa": "A-ser", "nt": "///A/2551", "aa": "///K/28", "trs_dist": 8.992, "rot_dist": -123.473, "six_params": [ -2.569, 7.035, 4.976, -47.651, 67.830, -101.643 ], "C_alpha": [ 6.537, 5.665, 2.447 ] }, { "index": 1035, "ntaa": "A-ser", "nt": "///A/2552", "aa": "///K/28", "trs_dist": 6.997, "rot_dist": -142.217, "six_params": [ 0.260, 6.697, 2.009, -24.744, 53.813, -136.269 ], "C_alpha": [ 6.743, 1.834, 0.253 ] }, { "index": 1036, "ntaa": "A-ser", "nt": "///A/2553", "aa": "///K/28", "trs_dist": -3.987, "rot_dist": -168.288, "six_params": [ 3.823, 1.075, 0.362, 7.351, 36.030, -167.655 ], "C_alpha": [ 1.477, -3.622, -0.765 ] }, { "index": 1037, "ntaa": "U-gln", "nt": "///A/2558", "aa": "///D/148", "trs_dist": 7.495, "rot_dist": 126.421, "six_params": [ -2.191, 2.217, 6.816, -75.099, 5.379, 110.607 ], "C_alpha": [ -5.973, 1.806, 4.134 ] }, { "index": 1038, "ntaa": "A-cys", "nt": "///A/2559", "aa": "///D/149", "trs_dist": 9.172, "rot_dist": 27.936, "six_params": [ 5.226, 7.101, 2.529, -4.920, 9.377, 25.888 ], "C_alpha": [ 3.653, 8.233, 1.774 ] }, { "index": 1039, "ntaa": "A-gln", "nt": "///A/2559", "aa": "///D/150", "trs_dist": -7.829, "rot_dist": 63.218, "six_params": [ 6.070, 3.535, -3.458, 46.582, -3.416, 43.859 ], "C_alpha": [ 3.988, 6.548, -1.603 ] }, { "index": 1040, "ntaa": "G-ser", "nt": "///A/2561", "aa": "///D/145", "trs_dist": 6.947, "rot_dist": -110.743, "six_params": [ 0.702, -6.010, 3.413, 7.065, -7.593, -110.418 ], "C_alpha": [ -4.820, -3.930, 3.085 ] }, { "index": 1041, "ntaa": "G-gly", "nt": "///A/2561", "aa": "///D/147", "trs_dist": -7.784, "rot_dist": 165.658, "six_params": [ -0.850, 7.720, -0.525, -11.409, 35.198, 164.872 ], "C_alpha": [ -7.706, -0.070, -0.964 ] }, { "index": 1042, "ntaa": "C-ser", "nt": "///A/2562", "aa": "///D/145", "trs_dist": 8.782, "rot_dist": -161.828, "six_params": [ -4.434, -7.489, 1.174, -8.701, -23.391, -161.385 ], "C_alpha": [ -8.054, 3.385, 0.818 ] }, { "index": 1043, "ntaa": "A-ala", "nt": "///A/2564", "aa": "///2/2", "trs_dist": -6.732, "rot_dist": -74.279, "six_params": [ -6.636, -0.729, -0.869, 72.372, 16.712, -0.604 ], "C_alpha": [ -6.707, -0.338, -0.221 ] }, { "index": 1044, "ntaa": "G-gln", "nt": "///A/2565", "aa": "///D/130", "trs_dist": -9.828, "rot_dist": 79.259, "six_params": [ -8.797, 0.380, 4.367, -40.674, -55.901, 41.449 ], "C_alpha": [ -9.492, -2.432, -0.556 ] }, { "index": 1045, "ntaa": "G-gly", "nt": "///A/2565", "aa": "///D/144", "trs_dist": -6.058, "rot_dist": 115.717, "six_params": [ -1.555, 5.184, -2.721, -24.300, -53.176, 104.871 ], "C_alpha": [ -3.479, 2.767, -4.120 ] }, { "index": 1046, "ntaa": "G-ser", "nt": "///A/2565", "aa": "///D/145", "trs_dist": -6.055, "rot_dist": 150.296, "six_params": [ 4.665, 1.668, -3.482, -16.609, 19.073, 149.540 ], "C_alpha": [ 0.006, 4.151, -4.395 ] }, { "index": 1047, "ntaa": "G-glu", "nt": "///A/2586", "aa": "///C/236", "trs_dist": 7.793, "rot_dist": 83.181, "six_params": [ 6.895, 1.738, 3.190, -67.654, -7.230, 51.064 ], "C_alpha": [ 4.612, 5.913, 2.101 ] }, { "index": 1048, "ntaa": "A-glu", "nt": "///A/2587", "aa": "///C/236", "trs_dist": -8.042, "rot_dist": 74.868, "six_params": [ 7.267, 3.366, 0.739, -69.902, 19.235, 20.114 ], "C_alpha": [ 6.504, 4.030, -2.449 ] }, { "index": 1049, "ntaa": "U-arg", "nt": "///A/2600", "aa": "///S/88", "trs_dist": 10.453, "rot_dist": 173.560, "six_params": [ -3.090, -9.586, 2.799, 32.415, 20.762, 173.178 ], "C_alpha": [ 9.860, -3.366, 0.544 ] }, { "index": 1050, "ntaa": "A-ala", "nt": "///A/2601", "aa": "///2/2", "trs_dist": -7.181, "rot_dist": -103.814, "six_params": [ -6.429, 0.539, -3.154, 43.303, -51.620, -84.288 ], "C_alpha": [ -1.891, 4.607, -5.160 ] }, { "index": 1051, "ntaa": "U-ala", "nt": "///A/2602", "aa": "///2/2", "trs_dist": -7.236, "rot_dist": -101.548, "six_params": [ -0.919, 4.898, -5.246, 40.035, -54.768, -80.705 ], "C_alpha": [ 5.024, 4.129, -3.149 ] }, { "index": 1052, "ntaa": "U-val", "nt": "///A/2602", "aa": "///2/3", "trs_dist": -6.758, "rot_dist": -125.050, "six_params": [ -0.181, 0.605, -6.728, 61.091, 42.515, -109.194 ], "C_alpha": [ 1.722, 4.215, -5.003 ] }, { "index": 1053, "ntaa": "U-gln", "nt": "///A/2602", "aa": "///2/4", "trs_dist": -5.298, "rot_dist": -44.641, "six_params": [ -2.419, 3.198, -3.462, -21.352, 9.222, -38.370 ], "C_alpha": [ -1.738, 3.274, -3.785 ] }, { "index": 1054, "ntaa": "U-gln", "nt": "///A/2602", "aa": "///2/5", "trs_dist": -6.022, "rot_dist": -88.320, "six_params": [ -4.929, -2.645, -2.228, 26.632, -58.508, -64.171 ], "C_alpha": [ -3.563, 0.122, -4.838 ] }, { "index": 1055, "ntaa": "G-val", "nt": "///A/2605", "aa": "///D/155", "trs_dist": 8.964, "rot_dist": -73.760, "six_params": [ -8.958, -0.182, 0.279, -50.563, 7.181, -55.131 ], "C_alpha": [ -7.873, 4.178, 0.874 ] }, { "index": 1056, "ntaa": "C-met", "nt": "///A/2606", "aa": "///D/161", "trs_dist": 10.425, "rot_dist": -32.018, "six_params": [ -10.131, 1.938, 1.510, 2.936, 30.371, -9.819 ], "C_alpha": [ -9.172, 2.655, 4.146 ] }, { "index": 1057, "ntaa": "C-ser", "nt": "///A/2607", "aa": "///D/162", "trs_dist": 9.272, "rot_dist": -123.188, "six_params": [ -6.476, -3.858, -5.399, -25.558, 73.329, -104.727 ], "C_alpha": [ -8.477, 3.728, 0.420 ] }, { "index": 1058, "ntaa": "G-his", "nt": "///A/2610", "aa": "///2/19", "trs_dist": 10.236, "rot_dist": -157.429, "six_params": [ 0.723, -9.757, -3.008, -40.885, 14.208, -155.692 ], "C_alpha": [ -9.864, -2.711, 0.510 ] }, { "index": 1059, "ntaa": "G-his", "nt": "///A/2611", "aa": "///2/19", "trs_dist": -10.661, "rot_dist": 176.129, "six_params": [ 3.181, 7.774, -6.565, 36.098, -24.276, 175.832 ], "C_alpha": [ -9.156, 4.543, -3.055 ] }, { "index": 1060, "ntaa": "A-ala", "nt": "///A/2619", "aa": "///D/64", "trs_dist": 6.423, "rot_dist": 54.088, "six_params": [ -5.989, 0.495, 2.268, 0.030, -14.160, 52.337 ], "C_alpha": [ -5.797, -2.297, 1.516 ] }, { "index": 1061, "ntaa": "G-ala", "nt": "///A/2620", "aa": "///D/64", "trs_dist": -6.979, "rot_dist": 33.832, "six_params": [ -5.667, 3.646, -1.815, -15.265, -21.755, 21.128 ], "C_alpha": [ -5.690, 2.298, -3.310 ] }, { "index": 1062, "ntaa": "G-gln", "nt": "///A/2620", "aa": "///D/65", "trs_dist": -8.146, "rot_dist": -83.569, "six_params": [ -6.505, -1.870, -4.533, -12.924, 62.881, -56.666 ], "C_alpha": [ -7.935, 1.841, -0.263 ] }, { "index": 1063, "ntaa": "A-gln", "nt": "///A/2621", "aa": "///D/65", "trs_dist": -10.357, "rot_dist": -88.732, "six_params": [ -5.153, 0.773, -8.951, 6.418, 44.300, -78.729 ], "C_alpha": [ -5.524, 6.096, -6.302 ] }, { "index": 1064, "ntaa": "U-ser", "nt": "///A/2640", "aa": "///G/110", "trs_dist": 8.382, "rot_dist": 168.306, "six_params": [ 1.567, 8.197, -0.786, 56.636, 26.840, 166.300 ], "C_alpha": [ -7.411, 2.711, 2.830 ] }, { "index": 1065, "ntaa": "C-gly", "nt": "///A/2653", "aa": "///G/108", "trs_dist": 7.422, "rot_dist": -78.798, "six_params": [ 4.350, 5.659, 2.034, 6.102, 56.483, -57.071 ], "C_alpha": [ 6.949, 2.603, -0.008 ] }, { "index": 1066, "ntaa": "C-phe", "nt": "///A/2653", "aa": "///G/109", "trs_dist": -5.793, "rot_dist": -97.082, "six_params": [ 0.776, 5.001, -2.820, -23.961, -64.148, -73.573 ], "C_alpha": [ 4.570, 2.064, -2.921 ] }, { "index": 1067, "ntaa": "C-arg", "nt": "///A/2653", "aa": "///G/152", "trs_dist": -13.456, "rot_dist": -109.221, "six_params": [ -3.438, 11.984, 5.064, -75.511, 17.344, -84.116 ], "C_alpha": [ 6.104, 11.623, -2.867 ] }, { "index": 1068, "ntaa": "C-phe", "nt": "///A/2654", "aa": "///G/109", "trs_dist": -5.897, "rot_dist": 139.099, "six_params": [ -2.977, 4.019, -3.125, 9.023, -72.751, 128.363 ], "C_alpha": [ -4.170, 1.304, -3.967 ] }, { "index": 1069, "ntaa": "C-ser", "nt": "///A/2654", "aa": "///G/110", "trs_dist": -3.378, "rot_dist": 49.513, "six_params": [ -3.320, -0.626, -0.033, -16.050, -45.441, 11.712 ], "C_alpha": [ -2.981, -1.020, -1.220 ] }, { "index": 1070, "ntaa": "C-his", "nt": "///A/2654", "aa": "///G/111", "trs_dist": 6.541, "rot_dist": -88.919, "six_params": [ -4.656, -4.515, -0.850, 31.561, 60.998, -60.370 ], "C_alpha": [ -6.354, -1.462, 0.471 ] }, { "index": 1071, "ntaa": "G-ser", "nt": "///A/2655", "aa": "///G/110", "trs_dist": -7.719, "rot_dist": -59.322, "six_params": [ -6.680, 3.214, -2.150, -33.822, -40.094, -28.748 ], "C_alpha": [ -4.693, 3.402, -5.098 ] }, { "index": 1072, "ntaa": "A-ala", "nt": "///A/2666", "aa": "///D/192", "trs_dist": 7.531, "rot_dist": -169.725, "six_params": [ -1.536, -7.370, 0.198, -10.515, 48.768, -168.665 ], "C_alpha": [ -7.367, 0.448, 1.468 ] }, { "index": 1073, "ntaa": "U-met", "nt": "///A/2669", "aa": "///D/12", "trs_dist": -9.295, "rot_dist": -56.143, "six_params": [ -5.318, 7.210, -2.479, -8.314, -30.524, -46.992 ], "C_alpha": [ -1.259, 8.140, -4.297 ] }, { "index": 1074, "ntaa": "U-thr", "nt": "///A/2669", "aa": "///D/13", "trs_dist": -9.530, "rot_dist": -81.205, "six_params": [ -7.986, 5.189, 0.350, -59.749, -16.721, -55.259 ], "C_alpha": [ -4.874, 7.495, -3.383 ] }, { "index": 1075, "ntaa": "U-pro", "nt": "///A/2669", "aa": "///D/24", "trs_dist": -5.624, "rot_dist": 158.788, "six_params": [ 0.728, 4.607, -3.142, -21.099, 11.125, 158.315 ], "C_alpha": [ -3.806, 1.165, -3.986 ] }, { "index": 1076, "ntaa": "C-arg", "nt": "///A/2670", "aa": "///K/70", "trs_dist": 10.515, "rot_dist": 179.858, "six_params": [ -2.795, 9.975, 1.807, 18.091, 35.615, 179.849 ], "C_alpha": [ -9.493, -1.847, 4.086 ] }, { "index": 1077, "ntaa": "U-ser", "nt": "///A/2677", "aa": "///N/6", "trs_dist": 3.365, "rot_dist": -83.244, "six_params": [ -0.707, -1.700, 2.816, 78.179, 28.592, -0.374 ], "C_alpha": [ -0.193, -3.137, 1.212 ] }, { "index": 1078, "ntaa": "U-gly", "nt": "///A/2677", "aa": "///N/7", "trs_dist": -2.697, "rot_dist": 139.107, "six_params": [ -0.388, -1.479, -2.222, 54.746, 55.853, 126.491 ], "C_alpha": [ -0.352, -1.514, -2.207 ] }, { "index": 1079, "ntaa": "U-his", "nt": "///A/2677", "aa": "///N/9", "trs_dist": -7.751, "rot_dist": -167.041, "six_params": [ -2.779, 2.807, -6.669, 23.154, -26.089, -166.414 ], "C_alpha": [ 3.960, 1.746, -6.431 ] }, { "index": 1080, "ntaa": "A-arg", "nt": "///A/2687", "aa": "///N/71", "trs_dist": 11.505, "rot_dist": 174.724, "six_params": [ -3.488, 10.882, -1.329, 50.348, -69.359, 172.800 ], "C_alpha": [ -11.069, -2.846, 1.452 ] }, { "index": 1081, "ntaa": "C-phe", "nt": "///A/2688", "aa": "///N/67", "trs_dist": -10.825, "rot_dist": 170.179, "six_params": [ -2.281, 10.048, 3.318, -45.182, 38.083, 168.707 ], "C_alpha": [ -10.795, -0.693, -0.177 ] }, { "index": 1082, "ntaa": "C-arg", "nt": "///A/2688", "aa": "///N/71", "trs_dist": -11.195, "rot_dist": 157.525, "six_params": [ -2.151, 9.683, -5.191, 26.352, -71.618, 151.301 ], "C_alpha": [ -10.228, 3.225, -3.268 ] }, { "index": 1083, "ntaa": "A-arg", "nt": "///A/2692", "aa": "///N/64", "trs_dist": 8.884, "rot_dist": 107.446, "six_params": [ -6.540, -0.090, 6.012, -20.924, -22.000, 104.375 ], "C_alpha": [ -5.343, -5.429, 4.582 ] }, { "index": 1084, "ntaa": "U-arg", "nt": "///A/2694", "aa": "///N/71", "trs_dist": 12.055, "rot_dist": -74.342, "six_params": [ -10.789, 3.827, 3.778, 66.740, -32.570, -3.699 ], "C_alpha": [ -11.618, 2.395, 2.239 ] }, { "index": 1085, "ntaa": "G-arg", "nt": "///A/2695", "aa": "///N/71", "trs_dist": -12.694, "rot_dist": -86.174, "six_params": [ -11.308, 5.648, -1.168, 57.026, -60.265, -25.739 ], "C_alpha": [ -8.174, 8.983, -3.740 ] }, { "index": 1086, "ntaa": "G-lys", "nt": "///A/2704", "aa": "///P/95", "trs_dist": 10.304, "rot_dist": 81.351, "six_params": [ -7.128, 6.114, 4.240, -25.559, -18.151, 76.057 ], "C_alpha": [ -10.150, 0.672, 1.610 ] }, { "index": 1087, "ntaa": "A-lys", "nt": "///A/2708", "aa": "///N/5", "trs_dist": -6.923, "rot_dist": 127.503, "six_params": [ -2.966, 4.715, -4.109, 24.132, 72.162, 111.668 ], "C_alpha": [ -6.843, -0.794, -0.579 ] }, { "index": 1088, "ntaa": "A-lys", "nt": "///A/2720", "aa": "///D/208", "trs_dist": -3.847, "rot_dist": -130.922, "six_params": [ 2.272, 1.096, -2.904, -74.951, 15.886, -116.088 ], "C_alpha": [ 0.124, -2.072, -3.242 ] }, { "index": 1089, "ntaa": "G-lys", "nt": "///A/2724", "aa": "///J/91", "trs_dist": 11.789, "rot_dist": 162.246, "six_params": [ -3.130, 11.337, -0.803, 29.495, 60.799, 158.599 ], "C_alpha": [ -11.208, -0.286, 3.643 ] }, { "index": 1090, "ntaa": "G-gln", "nt": "///A/2731", "aa": "///G/143", "trs_dist": 8.839, "rot_dist": 143.504, "six_params": [ -3.243, 7.504, -3.363, 56.107, 56.188, 131.967 ], "C_alpha": [ -8.544, -0.058, 2.264 ] }, { "index": 1091, "ntaa": "C-gln", "nt": "///A/2732", "aa": "///G/139", "trs_dist": 8.349, "rot_dist": 122.349, "six_params": [ -1.721, 8.158, -0.450, 42.857, 46.950, 110.890 ], "C_alpha": [ -6.939, 3.381, 3.181 ] }, { "index": 1092, "ntaa": "C-gln", "nt": "///A/2732", "aa": "///G/143", "trs_dist": -9.929, "rot_dist": 114.262, "six_params": [ 1.726, 7.294, -6.512, 68.970, 37.231, 91.111 ], "C_alpha": [ -6.748, 7.125, -1.511 ] }, { "index": 1093, "ntaa": "A-ala", "nt": "///A/2735", "aa": "///G/63", "trs_dist": 7.767, "rot_dist": 134.059, "six_params": [ -0.449, 7.752, -0.177, 24.368, 22.876, 131.908 ], "C_alpha": [ -7.083, 2.811, 1.542 ] }, { "index": 1094, "ntaa": "A-thr", "nt": "///A/2735", "aa": "///G/67", "trs_dist": -9.616, "rot_dist": 120.986, "six_params": [ 3.684, 6.522, -6.029, 61.075, 26.069, 107.880 ], "C_alpha": [ -5.598, 7.386, -2.556 ] }, { "index": 1095, "ntaa": "G-ser", "nt": "///A/2738", "aa": "///G/2", "trs_dist": 5.096, "rot_dist": -169.424, "six_params": [ -4.626, -0.761, 1.996, -15.049, 60.722, -167.619 ], "C_alpha": [ -0.659, 2.906, 4.130 ] }, { "index": 1096, "ntaa": "A-lys", "nt": "///A/2740", "aa": "///6/15", "trs_dist": 10.621, "rot_dist": 26.475, "six_params": [ -10.218, 2.898, 0.078, 12.755, 1.761, 23.182 ], "C_alpha": [ -10.569, 0.759, 0.549 ] }, { "index": 1097, "ntaa": "C-arg", "nt": "///A/2742", "aa": "///6/19", "trs_dist": -10.135, "rot_dist": -145.719, "six_params": [ -3.424, 8.387, -4.546, -68.225, 40.572, -134.962 ], "C_alpha": [ 2.305, 6.969, -6.974 ] }, { "index": 1098, "ntaa": "A-gln", "nt": "///A/2744", "aa": "///G/60", "trs_dist": -9.122, "rot_dist": 87.172, "six_params": [ -5.336, 5.901, -4.462, -62.394, 60.285, 9.465 ], "C_alpha": [ -7.845, 2.951, -3.616 ] }, { "index": 1099, "ntaa": "A-ala", "nt": "///A/2744", "aa": "///G/63", "trs_dist": -6.370, "rot_dist": 71.738, "six_params": [ -4.638, 2.390, -3.655, -10.810, -26.613, 66.455 ], "C_alpha": [ -4.151, -0.337, -4.827 ] }, { "index": 1100, "ntaa": "A-thr", "nt": "///A/2744", "aa": "///G/67", "trs_dist": -4.789, "rot_dist": 104.863, "six_params": [ -3.942, -2.649, 0.613, -8.168, -64.736, 87.239 ], "C_alpha": [ -0.840, -4.494, -1.409 ] }, { "index": 1101, "ntaa": "A-thr", "nt": "///A/2745", "aa": "///G/67", "trs_dist": -6.319, "rot_dist": 98.695, "six_params": [ -4.408, 1.780, -4.163, -26.064, -83.298, 51.630 ], "C_alpha": [ -0.608, 0.300, -6.278 ] }, { "index": 1102, "ntaa": "A-leu", "nt": "///A/2745", "aa": "///G/71", "trs_dist": -7.235, "rot_dist": -72.397, "six_params": [ 2.193, -4.590, -5.145, -32.911, 50.830, -41.725 ], "C_alpha": [ -2.042, -5.588, -4.116 ] }, { "index": 1103, "ntaa": "G-gln", "nt": "///A/2746", "aa": "///G/139", "trs_dist": -8.714, "rot_dist": 80.884, "six_params": [ -8.351, 1.822, 1.692, -32.755, -32.516, 68.364 ], "C_alpha": [ -8.022, -3.163, -1.252 ] }, { "index": 1104, "ntaa": "C-gln", "nt": "///A/2747", "aa": "///G/139", "trs_dist": -11.270, "rot_dist": 56.150, "six_params": [ -7.588, 8.290, -0.850, -45.274, -21.740, 25.968 ], "C_alpha": [ -8.395, 5.302, -5.331 ] }, { "index": 1105, "ntaa": "G-gln", "nt": "///A/2748", "aa": "///G/143", "trs_dist": -10.534, "rot_dist": 88.513, "six_params": [ -6.756, 7.979, 1.289, -57.291, -54.225, 43.926 ], "C_alpha": [ -7.833, 4.232, -5.635 ] }, { "index": 1106, "ntaa": "G-glu", "nt": "///A/2767", "aa": "///J/102", "trs_dist": -7.121, "rot_dist": 132.903, "six_params": [ -4.989, -4.822, -1.599, 50.780, 23.727, 126.180 ], "C_alpha": [ 1.027, -6.607, -2.463 ] }, { "index": 1107, "ntaa": "G-lys", "nt": "///A/2767", "aa": "///J/106", "trs_dist": -9.669, "rot_dist": 134.847, "six_params": [ -1.923, -9.462, -0.522, 72.424, -7.021, 123.039 ], "C_alpha": [ 5.596, -4.983, -6.113 ] }, { "index": 1108, "ntaa": "G-tyr", "nt": "///A/2767", "aa": "///J/119", "trs_dist": -8.683, "rot_dist": -76.608, "six_params": [ -1.694, 4.449, -7.262, -62.360, -40.359, -20.260 ], "C_alpha": [ 1.175, -0.226, -8.597 ] }, { "index": 1109, "ntaa": "C-his", "nt": "///A/2772", "aa": "///D/68", "trs_dist": 8.900, "rot_dist": 161.567, "six_params": [ 0.966, 8.730, -1.437, 59.143, 37.790, 157.423 ], "C_alpha": [ -7.985, 2.809, 2.746 ] }, { "index": 1110, "ntaa": "U-ala", "nt": "///A/2773", "aa": "///D/64", "trs_dist": 7.525, "rot_dist": 120.618, "six_params": [ -0.979, 7.295, -1.568, 31.411, 7.598, 117.912 ], "C_alpha": [ -6.891, 2.963, 0.526 ] }, { "index": 1111, "ntaa": "C-asn", "nt": "///A/2801", "aa": "///2/25", "trs_dist": 9.755, "rot_dist": 87.757, "six_params": [ -6.246, 5.373, -5.223, 2.592, 85.183, 23.294 ], "C_alpha": [ -9.017, 3.683, 0.478 ] }, { "index": 1112, "ntaa": "C-his", "nt": "///A/2802", "aa": "///2/40", "trs_dist": 10.994, "rot_dist": -83.632, "six_params": [ -9.997, -0.562, 4.541, -77.203, -8.603, -33.782 ], "C_alpha": [ -9.208, 5.059, 3.189 ] }, { "index": 1113, "ntaa": "A-ala", "nt": "///A/2807", "aa": "///D/196", "trs_dist": 6.338, "rot_dist": 89.140, "six_params": [ -3.787, 4.471, 2.415, 31.464, 80.185, 25.591 ], "C_alpha": [ -1.681, 3.071, 5.279 ] }, { "index": 1114, "ntaa": "A-thr", "nt": "///A/2807", "aa": "///D/197", "trs_dist": 4.377, "rot_dist": 74.197, "six_params": [ 1.571, 0.280, 4.076, 12.014, -35.313, 65.337 ], "C_alpha": [ 0.301, -0.012, 4.366 ] }, { "index": 1115, "ntaa": "A-arg", "nt": "///A/2807", "aa": "///N/4", "trs_dist": -8.247, "rot_dist": 100.598, "six_params": [ 2.288, 4.582, -6.464, 25.274, 74.052, 69.148 ], "C_alpha": [ -4.809, 3.921, -5.432 ] }, { "index": 1116, "ntaa": "A-arg", "nt": "///A/2808", "aa": "///N/2", "trs_dist": 9.092, "rot_dist": 72.306, "six_params": [ 5.766, 1.049, 6.951, 49.982, 4.986, 53.812 ], "C_alpha": [ 6.259, 1.033, 6.476 ] }, { "index": 1117, "ntaa": "G-met", "nt": "///A/2809", "aa": "///N/1", "trs_dist": 7.672, "rot_dist": -147.726, "six_params": [ 1.333, 6.730, 3.435, 17.575, -44.430, -144.606 ], "C_alpha": [ 5.741, 2.117, 4.645 ] }, { "index": 1118, "ntaa": "G-arg", "nt": "///A/2809", "aa": "///N/2", "trs_dist": 6.405, "rot_dist": 45.892, "six_params": [ 5.868, -0.429, 2.529, 44.095, 1.873, 12.903 ], "C_alpha": [ 6.003, -0.637, 2.072 ] }, { "index": 1119, "ntaa": "C-arg", "nt": "///A/2817", "aa": "///D/60", "trs_dist": 12.704, "rot_dist": 88.252, "six_params": [ 7.938, 9.229, -3.634, 63.093, -53.060, 34.782 ], "C_alpha": [ 4.578, 10.618, 5.296 ] }, { "index": 1120, "ntaa": "G-arg", "nt": "///A/2818", "aa": "///D/60", "trs_dist": 12.429, "rot_dist": 95.997, "six_params": [ 5.556, 3.494, 10.555, -10.691, 84.379, 49.543 ], "C_alpha": [ 8.309, 8.461, 3.765 ] }, { "index": 1121, "ntaa": "G-his", "nt": "///A/2818", "aa": "///2/40", "trs_dist": -11.353, "rot_dist": -140.112, "six_params": [ -0.773, -10.990, -2.741, -19.150, -46.452, -135.736 ], "C_alpha": [ -10.454, -4.270, -1.016 ] }, { "index": 1122, "ntaa": "U-arg", "nt": "///A/2820", "aa": "///D/57", "trs_dist": 10.380, "rot_dist": -101.923, "six_params": [ -3.413, 9.792, 0.458, 50.288, 47.874, -79.964 ], "C_alpha": [ 3.796, 7.756, 5.749 ] }, { "index": 1123, "ntaa": "U-ser", "nt": "///A/2820", "aa": "///D/59", "trs_dist": 6.156, "rot_dist": 78.752, "six_params": [ 4.355, 2.679, 3.428, -1.443, -78.645, 4.202 ], "C_alpha": [ 1.119, 2.785, 5.380 ] }, { "index": 1124, "ntaa": "G-arg", "nt": "///A/2825", "aa": "///N/45", "trs_dist": 11.472, "rot_dist": 76.699, "six_params": [ -9.264, 6.704, -0.917, -46.795, 60.529, 5.880 ], "C_alpha": [ -9.492, 6.317, 1.277 ] }, { "index": 1125, "ntaa": "G-gly", "nt": "///A/2825", "aa": "///N/93", "trs_dist": 5.957, "rot_dist": -102.090, "six_params": [ -3.757, -2.775, 3.697, 83.490, 5.952, -64.861 ], "C_alpha": [ -5.537, -1.944, 1.096 ] }, { "index": 1126, "ntaa": "G-pro", "nt": "///A/2826", "aa": "///N/91", "trs_dist": 7.805, "rot_dist": 132.953, "six_params": [ -3.528, 5.907, 3.684, -23.445, -17.724, 131.260 ], "C_alpha": [ -7.520, -0.892, 1.837 ] }, { "index": 1127, "ntaa": "G-gly", "nt": "///A/2826", "aa": "///N/92", "trs_dist": 6.670, "rot_dist": 167.570, "six_params": [ 1.538, 6.400, 1.082, -1.042, 29.098, 167.156 ], "C_alpha": [ -6.197, 2.440, 0.586 ] }, { "index": 1128, "ntaa": "G-gly", "nt": "///A/2826", "aa": "///N/93", "trs_dist": -7.978, "rot_dist": -124.497, "six_params": [ -7.369, -2.946, 0.811, 83.992, -25.516, -99.499 ], "C_alpha": [ -6.267, 4.048, -2.846 ] }, { "index": 1129, "ntaa": "G-ala", "nt": "///A/2835", "aa": "///P/96", "trs_dist": 8.336, "rot_dist": 90.849, "six_params": [ 6.050, 4.547, -3.494, 19.063, -70.405, 58.438 ], "C_alpha": [ 3.564, 7.425, 1.364 ] }, { "index": 1130, "ntaa": "A-ala", "nt": "///A/2837", "aa": "///N/61", "trs_dist": 6.669, "rot_dist": -151.799, "six_params": [ 1.841, -6.368, 0.729, -9.344, -38.902, -149.947 ], "C_alpha": [ -5.681, -2.986, 1.801 ] }, { "index": 1131, "ntaa": "A-ala", "nt": "///A/2838", "aa": "///N/61", "trs_dist": -7.802, "rot_dist": 171.347, "six_params": [ 2.340, 7.079, -2.297, 25.874, 41.719, 170.485 ], "C_alpha": [ -7.334, 2.274, -1.370 ] }, { "index": 1132, "ntaa": "A-lys", "nt": "///A/2860", "aa": "///N/5", "trs_dist": 6.090, "rot_dist": 109.356, "six_params": [ -2.707, 5.394, -0.818, 24.213, 55.195, 96.092 ], "C_alpha": [ -5.615, 1.673, 1.629 ] }, { "index": 1133, "ntaa": "A-ser", "nt": "///A/2860", "aa": "///N/6", "trs_dist": -6.579, "rot_dist": -107.069, "six_params": [ -5.655, -2.884, 1.731, 33.129, -59.941, -88.061 ], "C_alpha": [ -5.948, 1.829, -2.135 ] }, { "index": 1134, "ntaa": "C-pro", "nt": "///A/2867", "aa": "///N/91", "trs_dist": -9.571, "rot_dist": 33.158, "six_params": [ -2.494, 5.957, -7.064, 29.010, 15.626, 3.750 ], "C_alpha": [ -3.584, 7.341, -4.961 ] }, { "index": 1135, "ntaa": "C-gly", "nt": "///A/2867", "aa": "///N/92", "trs_dist": -7.480, "rot_dist": -41.472, "six_params": [ -5.401, 3.249, -4.028, -23.260, 13.975, -31.661 ], "C_alpha": [ -5.003, 3.984, -3.897 ] }, { "index": 1136, "ntaa": "C-gly", "nt": "///A/2867", "aa": "///N/93", "trs_dist": -6.711, "rot_dist": -89.164, "six_params": [ -5.927, 1.151, 2.932, -78.637, -40.654, -11.973 ], "C_alpha": [ -6.142, 2.687, -0.522 ] }, { "index": 1137, "ntaa": "U-arg", "nt": "///A/2868", "aa": "///N/45", "trs_dist": -11.834, "rot_dist": 146.807, "six_params": [ -0.286, 11.740, -1.456, -45.091, 56.967, 138.470 ], "C_alpha": [ -10.404, 1.748, -5.356 ] }, { "index": 1138, "ntaa": "U-his", "nt": "///A/2871", "aa": "///2/37", "trs_dist": 7.829, "rot_dist": 139.683, "six_params": [ -0.773, -7.162, -3.067, -58.365, 38.150, 130.330 ], "C_alpha": [ 6.499, -4.209, 1.132 ] }, { "index": 1139, "ntaa": "U-arg", "nt": "///A/2871", "aa": "///2/39", "trs_dist": 6.229, "rot_dist": -127.985, "six_params": [ 1.081, 5.922, -1.600, 78.205, 8.175, -110.949 ], "C_alpha": [ 5.269, 2.283, 2.421 ] }, { "index": 1140, "ntaa": "U-his", "nt": "///A/2871", "aa": "///2/40", "trs_dist": -6.783, "rot_dist": 118.842, "six_params": [ 6.403, -0.169, 2.234, 72.764, 46.048, 91.751 ], "C_alpha": [ 5.147, 4.372, -0.784 ] }, { "index": 1141, "ntaa": "U-tyr", "nt": "///A/2871", "aa": "///2/48", "trs_dist": -6.688, "rot_dist": -142.846, "six_params": [ 2.768, 3.356, -5.080, -39.964, 37.559, -137.934 ], "C_alpha": [ 1.524, -0.296, -6.512 ] }, { "index": 1142, "ntaa": "U-arg", "nt": "///A/2871", "aa": "///2/49", "trs_dist": -5.193, "rot_dist": -77.652, "six_params": [ -1.259, -0.217, -5.033, -14.164, 10.722, -75.907 ], "C_alpha": [ -1.869, 0.424, -4.865 ] }, { "index": 1143, "ntaa": "G-arg", "nt": "///A/2873", "aa": "///2/39", "trs_dist": -8.447, "rot_dist": 141.220, "six_params": [ 0.317, 7.254, -4.317, -36.845, 49.004, 134.598 ], "C_alpha": [ -5.863, 0.330, -6.069 ] }, { "index": 1144, "ntaa": "U-ala", "nt": "///A/2885", "aa": "///J/134", "trs_dist": 7.451, "rot_dist": 146.308, "six_params": [ -0.094, 7.438, -0.422, 26.489, -17.082, 144.951 ], "C_alpha": [ -7.043, 2.060, 1.275 ] }, { "index": 1145, "ntaa": "G-ala", "nt": "///A/2886", "aa": "///J/134", "trs_dist": -8.600, "rot_dist": 118.264, "six_params": [ 2.455, 7.033, -4.298, 13.425, -22.534, 116.421 ], "C_alpha": [ -4.666, 6.617, -2.892 ] }, { "index": 1146, "ntaa": "G-gln", "nt": "///B/6", "aa": "///O/39", "trs_dist": 11.333, "rot_dist": 20.391, "six_params": [ -10.014, -2.063, 4.889, 3.355, -0.370, 20.113 ], "C_alpha": [ -9.488, -3.910, 4.787 ] }, { "index": 1147, "ntaa": "A-gln", "nt": "///B/7", "aa": "///O/39", "trs_dist": -10.899, "rot_dist": -17.176, "six_params": [ -10.604, 2.484, 0.406, -3.540, -13.892, -9.486 ], "C_alpha": [ -10.320, 3.349, -0.963 ] }, { "index": 1148, "ntaa": "C-gly", "nt": "///B/8", "aa": "///O/45", "trs_dist": 9.434, "rot_dist": 142.152, "six_params": [ -2.539, 6.091, 6.742, -54.833, 65.623, 127.574 ], "C_alpha": [ -7.560, 4.328, 3.606 ] }, { "index": 1149, "ntaa": "C-gly", "nt": "///B/8", "aa": "///O/46", "trs_dist": 6.902, "rot_dist": 103.352, "six_params": [ -4.105, 5.217, -1.888, 15.362, 70.687, 79.626 ], "C_alpha": [ -6.626, 1.326, 1.491 ] }, { "index": 1150, "ntaa": "C-gly", "nt": "///B/12", "aa": "///W/73", "trs_dist": 6.616, "rot_dist": -49.338, "six_params": [ 1.383, 6.092, 2.178, 15.560, -36.365, -30.103 ], "C_alpha": [ 1.927, 5.424, 3.315 ] }, { "index": 1151, "ntaa": "C-ala", "nt": "///B/12", "aa": "///W/74", "trs_dist": 5.140, "rot_dist": -88.151, "six_params": [ -3.314, 1.217, 3.736, -13.142, 27.018, -83.880 ], "C_alpha": [ -0.642, 2.822, 4.236 ] }, { "index": 1152, "ntaa": "C-his", "nt": "///B/37", "aa": "///O/99", "trs_dist": 8.523, "rot_dist": 178.264, "six_params": [ -1.004, 7.409, 4.091, -17.370, 10.044, 178.237 ], "C_alpha": [ -7.964, -0.583, 2.985 ] }, { "index": 1153, "ntaa": "U-lys", "nt": "///B/40", "aa": "///1/2", "trs_dist": 6.176, "rot_dist": 122.371, "six_params": [ 5.490, -1.943, 2.056, 9.550, -33.751, 119.275 ], "C_alpha": [ 4.236, 2.948, 3.395 ] }, { "index": 1154, "ntaa": "C-val", "nt": "///B/41", "aa": "///F/67", "trs_dist": -6.367, "rot_dist": 56.449, "six_params": [ 3.287, 0.570, -5.423, 13.893, -49.775, 23.540 ], "C_alpha": [ 4.921, 2.158, -3.418 ] }, { "index": 1155, "ntaa": "C-tyr", "nt": "///B/41", "aa": "///F/69", "trs_dist": -5.771, "rot_dist": 73.136, "six_params": [ 3.721, -4.397, -0.351, -43.416, 55.633, 20.592 ], "C_alpha": [ 4.283, -3.845, -0.401 ] }, { "index": 1156, "ntaa": "C-val", "nt": "///B/42", "aa": "///F/66", "trs_dist": 7.896, "rot_dist": -98.814, "six_params": [ -6.418, 2.970, 3.513, -41.983, 65.584, -66.454 ], "C_alpha": [ -0.695, 5.953, 5.107 ] }, { "index": 1157, "ntaa": "C-lys", "nt": "///B/42", "aa": "///F/88", "trs_dist": 9.067, "rot_dist": 122.309, "six_params": [ 5.571, 2.269, 6.784, 41.401, 59.078, 106.707 ], "C_alpha": [ 4.705, 6.879, 3.555 ] }, { "index": 1158, "ntaa": "C-val", "nt": "///B/42", "aa": "///F/89", "trs_dist": 8.396, "rot_dist": -90.273, "six_params": [ -2.303, 7.856, -1.863, 38.344, -41.065, -73.812 ], "C_alpha": [ 3.308, 7.726, 0.097 ] }, { "index": 1159, "ntaa": "C-thr", "nt": "///B/42", "aa": "///F/90", "trs_dist": -7.508, "rot_dist": 102.983, "six_params": [ 7.396, 0.699, -1.088, 53.754, 40.409, 83.210 ], "C_alpha": [ 3.847, 5.670, -3.060 ] }, { "index": 1160, "ntaa": "C-thr", "nt": "///B/43", "aa": "///F/90", "trs_dist": -6.731, "rot_dist": -77.192, "six_params": [ -5.943, 1.458, -2.803, -57.189, -17.285, -51.338 ], "C_alpha": [ -5.001, 2.086, -3.976 ] }, { "index": 1161, "ntaa": "C-arg", "nt": "///B/43", "aa": "///F/92", "trs_dist": 8.932, "rot_dist": -81.900, "six_params": [ -7.324, 0.087, 5.111, -70.655, -37.910, -18.303 ], "C_alpha": [ -8.010, 3.585, 1.653 ] }, { "index": 1162, "ntaa": "A-arg", "nt": "///B/45", "aa": "///F/92", "trs_dist": -11.192, "rot_dist": -143.672, "six_params": [ -7.624, 8.185, -0.359, -86.094, 12.704, -129.083 ], "C_alpha": [ 2.051, 9.763, -5.045 ] }, { "index": 1163, "ntaa": "A-ser", "nt": "///B/52", "aa": "///O/33", "trs_dist": 6.393, "rot_dist": -152.903, "six_params": [ 2.702, 5.666, -1.214, 17.313, -38.199, -150.941 ], "C_alpha": [ 6.230, -1.281, 0.597 ] }, { "index": 1164, "ntaa": "G-met", "nt": "///B/54", "aa": "///F/26", "trs_dist": 10.223, "rot_dist": -35.330, "six_params": [ -8.919, -0.425, 4.978, 24.263, -12.138, -22.847 ], "C_alpha": [ -9.475, 0.530, 3.830 ] }, { "index": 1165, "ntaa": "A-met", "nt": "///B/57", "aa": "///F/26", "trs_dist": -5.818, "rot_dist": -54.960, "six_params": [ -3.748, 3.576, -2.648, -31.203, -42.822, -15.159 ], "C_alpha": [ -2.007, 2.866, -4.659 ] }, { "index": 1166, "ntaa": "A-glu", "nt": "///B/57", "aa": "///F/27", "trs_dist": -7.756, "rot_dist": -75.910, "six_params": [ -6.015, 0.246, -4.889, -12.548, 20.654, -72.516 ], "C_alpha": [ -5.607, 3.833, -3.737 ] }, { "index": 1167, "ntaa": "A-tyr", "nt": "///B/73", "aa": "///V/34", "trs_dist": 5.142, "rot_dist": -111.924, "six_params": [ 3.860, -3.393, 0.165, 39.052, -32.131, -103.506 ], "C_alpha": [ -0.330, -5.114, 0.082 ] }, { "index": 1168, "ntaa": "A-pro", "nt": "///B/73", "aa": "///V/40", "trs_dist": 5.986, "rot_dist": 70.756, "six_params": [ -4.476, -2.319, 3.227, -23.413, -29.115, 61.212 ], "C_alpha": [ -3.563, -4.175, 2.420 ] }, { "index": 1169, "ntaa": "G-his", "nt": "///B/75", "aa": "///V/91", "trs_dist": 9.989, "rot_dist": -145.693, "six_params": [ -2.392, -7.217, 6.479, 13.201, -54.726, -140.917 ], "C_alpha": [ -8.998, 2.000, 3.821 ] }, { "index": 1170, "ntaa": "G-asp", "nt": "///B/75", "aa": "///V/93", "trs_dist": -8.706, "rot_dist": 140.162, "six_params": [ 0.002, 7.849, -3.766, 10.494, 69.585, 130.728 ], "C_alpha": [ -8.206, 1.621, -2.407 ] }, { "index": 1171, "ntaa": "G-gln", "nt": "///B/76", "aa": "///V/81", "trs_dist": -10.790, "rot_dist": -68.007, "six_params": [ -10.065, 3.339, 1.992, -65.485, -18.320, -1.061 ], "C_alpha": [ -10.042, 3.522, -1.653 ] }, { "index": 1172, "ntaa": "G-lys", "nt": "///B/79", "aa": "///V/16", "trs_dist": -8.801, "rot_dist": 158.626, "six_params": [ 0.580, -8.782, -0.046, 24.560, -18.202, 157.832 ], "C_alpha": [ 8.562, -0.943, -1.815 ] }, { "index": 1173, "ntaa": "U-lys", "nt": "///B/80", "aa": "///V/16", "trs_dist": -8.108, "rot_dist": 120.933, "six_params": [ -2.163, -7.270, -2.865, 11.704, -14.852, 120.037 ], "C_alpha": [ 5.132, -4.964, -3.845 ] }, { "index": 1174, "ntaa": "U-tyr", "nt": "///B/82", "aa": "///Z/51", "trs_dist": 11.395, "rot_dist": -55.280, "six_params": [ -10.707, -2.402, -3.075, -11.093, 42.605, -34.299 ], "C_alpha": [ -11.290, 0.879, 1.264 ] }, { "index": 1175, "ntaa": "A-tyr", "nt": "///B/94", "aa": "///Z/51", "trs_dist": 11.846, "rot_dist": -142.847, "six_params": [ -1.295, -10.600, 5.129, 28.891, 5.476, -141.541 ], "C_alpha": [ -11.274, -2.753, 2.374 ] }, { "index": 1176, "ntaa": "U-lys", "nt": "///B/97", "aa": "///V/16", "trs_dist": 6.504, "rot_dist": 39.724, "six_params": [ 6.418, -0.815, 0.665, 26.455, -26.643, 13.213 ], "C_alpha": [ 6.206, -0.397, 1.913 ] }, { "index": 1177, "ntaa": "G-gly", "nt": "///B/98", "aa": "///V/15", "trs_dist": 4.865, "rot_dist": -138.682, "six_params": [ 3.009, 3.773, 0.619, -37.486, -61.443, -128.299 ], "C_alpha": [ 4.750, -0.609, 0.867 ] }, { "index": 1178, "ntaa": "G-lys", "nt": "///B/98", "aa": "///V/16", "trs_dist": -3.624, "rot_dist": -43.284, "six_params": [ 2.334, -1.985, -1.935, 7.593, -32.650, -27.786 ], "C_alpha": [ 2.276, -2.490, -1.325 ] }, { "index": 1179, "ntaa": "U-tyr", "nt": "///B/103", "aa": "///V/34", "trs_dist": 9.853, "rot_dist": 67.310, "six_params": [ -9.850, -0.204, 0.074, -63.682, 13.241, 18.356 ], "C_alpha": [ -9.659, -1.390, 1.242 ] }, { "index": 1180, "ntaa": "G-gly", "nt": "///B/112", "aa": "///O/46", "trs_dist": 7.121, "rot_dist": 108.921, "six_params": [ -4.979, 4.347, 2.648, -60.466, -1.259, 95.431 ], "C_alpha": [ -7.133, -0.284, 0.057 ] }, { "index": 1181, "ntaa": "U-val", "nt": "///B/113", "aa": "///O/48", "trs_dist": 8.904, "rot_dist": -61.182, "six_params": [ -8.723, -0.790, 1.604, -37.175, -2.177, -49.439 ], "C_alpha": [ -8.058, 3.403, 1.610 ] }, { "index": 1182, "ntaa": "C-gln", "nt": "///B/114", "aa": "///O/39", "trs_dist": -10.696, "rot_dist": 173.701, "six_params": [ 0.571, 10.195, -3.184, 18.644, 10.303, 173.590 ], "C_alpha": [ -10.535, 0.940, -1.524 ] } ], "num_bpAA_contacts": 578, "bpAA_contacts": [ { "index": 1, "bpaa": "GU-lys", "z_directions": "-", "nt1": "///a/15", "nt2": "///a/914", "aa": "///e/24", "trs_dist": -8.293, "rot_dist": 70.705, "six_params": [ -6.530, 3.240, -3.955, 47.932, 7.242, 53.124 ], "C_alpha": [ -8.007, 0.976, -1.891 ] }, { "index": 2, "bpaa": "GU-thr", "z_directions": "-", "nt1": "///a/15", "nt2": "///a/914", "aa": "///e/25", "trs_dist": -8.147, "rot_dist": -167.031, "six_params": [ -5.168, -6.108, -1.535, 14.744, -61.770, -164.736 ], "C_alpha": [ -6.097, 2.675, -4.697 ] }, { "index": 3, "bpaa": "AU-pro", "z_directions": "+", "nt1": "///a/32", "nt2": "///a/546", "aa": "///l/28", "trs_dist": -6.881, "rot_dist": 46.776, "six_params": [ -6.862, -0.332, 0.372, -11.545, -38.857, 23.850 ], "C_alpha": [ -6.389, -1.806, -1.898 ] }, { "index": 4, "bpaa": "AU-gln", "z_directions": "-", "nt1": "///a/32", "nt2": "///a/546", "aa": "///l/29", "trs_dist": 9.641, "rot_dist": -98.372, "six_params": [ -5.931, -7.271, -2.212, 25.913, 76.859, -61.309 ], "C_alpha": [ -9.222, -2.742, 0.474 ] }, { "index": 5, "bpaa": "AU-pro", "z_directions": "+", "nt1": "///a/33", "nt2": "///a/545", "aa": "///l/28", "trs_dist": -8.184, "rot_dist": -52.356, "six_params": [ -6.447, 3.179, -3.912, -27.746, -43.297, -10.183 ], "C_alpha": [ -4.273, 2.241, -6.627 ] }, { "index": 6, "bpaa": "AU-gln", "z_directions": "-", "nt1": "///a/33", "nt2": "///a/545", "aa": "///l/29", "trs_dist": -9.492, "rot_dist": -110.158, "six_params": [ -4.831, -5.289, -6.229, 48.212, 56.127, -88.429 ], "C_alpha": [ -7.475, 3.263, -4.831 ] }, { "index": 7, "bpaa": "GC-ser", "z_directions": "-", "nt1": "///a/35", "nt2": "///a/543", "aa": "///l/115", "trs_dist": -7.369, "rot_dist": 123.622, "six_params": [ -0.202, 7.347, -0.532, 7.698, 12.183, 123.133 ], "C_alpha": [ -6.580, 3.295, -0.015 ] }, { "index": 8, "bpaa": "GC-ala", "z_directions": "-", "nt1": "///a/39", "nt2": "///a/397", "aa": "///d/2", "trs_dist": -6.864, "rot_dist": -153.256, "six_params": [ -0.751, 1.996, -6.525, 27.891, -64.277, -147.187 ], "C_alpha": [ 4.104, -1.568, -5.280 ] }, { "index": 9, "bpaa": "AG-ser", "z_directions": "+", "nt1": "///a/60", "nt2": "///a/101", "aa": "///t/6", "trs_dist": 8.359, "rot_dist": 78.523, "six_params": [ -7.992, -2.310, -0.822, -32.715, 18.286, 70.308 ], "C_alpha": [ -5.224, -6.435, 1.131 ] }, { "index": 10, "bpaa": "AG-arg", "z_directions": "+", "nt1": "///a/60", "nt2": "///a/101", "aa": "///t/10", "trs_dist": 10.474, "rot_dist": 86.325, "six_params": [ -5.094, -7.665, 4.999, -33.022, -25.778, 77.290 ], "C_alpha": [ -1.127, -8.703, 5.707 ] }, { "index": 11, "bpaa": "GC-ser", "z_directions": "-", "nt1": "///a/61", "nt2": "///a/100", "aa": "///t/6", "trs_dist": -7.472, "rot_dist": 9.967, "six_params": [ 5.957, 4.226, -1.578, 9.174, 2.846, 2.663 ], "C_alpha": [ 5.823, 4.495, -1.392 ] }, { "index": 12, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///a/61", "nt2": "///a/100", "aa": "///t/10", "trs_dist": -9.773, "rot_dist": 48.456, "six_params": [ 7.209, -2.661, -6.038, 36.167, -31.797, 5.543 ], "C_alpha": [ 8.711, -0.559, -4.387 ] }, { "index": 13, "bpaa": "GC-lys", "z_directions": "-", "nt1": "///a/66", "nt2": "///a/97", "aa": "///t/9", "trs_dist": -13.116, "rot_dist": -105.973, "six_params": [ 11.667, -3.184, -5.076, 23.945, 21.839, -102.355 ], "C_alpha": [ 5.116, -9.275, -7.724 ] }, { "index": 14, "bpaa": "GC-lys", "z_directions": "+", "nt1": "///a/98", "nt2": "///a/63", "aa": "///t/9", "trs_dist": 11.183, "rot_dist": -126.476, "six_params": [ -1.901, 10.931, 1.404, 31.319, -3.268, -124.212 ], "C_alpha": [ 8.041, 6.493, 4.248 ] }, { "index": 15, "bpaa": "AU-arg", "z_directions": "+", "nt1": "///a/120", "nt2": "///a/229", "aa": "///q/9", "trs_dist": 12.734, "rot_dist": -61.564, "six_params": [ -11.700, 1.789, 4.697, 58.658, -10.750, -16.045 ], "C_alpha": [ -12.050, 1.231, 3.900 ] }, { "index": 16, "bpaa": "AU-glu", "z_directions": "+", "nt1": "///a/120", "nt2": "///a/229", "aa": "///q/66", "trs_dist": 11.822, "rot_dist": 54.863, "six_params": [ -11.266, -2.434, 2.629, -17.601, 18.591, 48.939 ], "C_alpha": [ -8.937, -6.110, 4.744 ] }, { "index": 17, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///a/121", "nt2": "///a/228", "aa": "///q/9", "trs_dist": -13.737, "rot_dist": -68.307, "six_params": [ -13.249, 3.508, -0.924, 51.897, -30.545, -33.878 ], "C_alpha": [ -10.936, 7.862, -2.654 ] }, { "index": 18, "bpaa": "GC-glu", "z_directions": "+", "nt1": "///a/121", "nt2": "///a/228", "aa": "///q/66", "trs_dist": -11.197, "rot_dist": 35.225, "six_params": [ -10.712, 2.557, -2.022, -21.123, 16.106, 23.347 ], "C_alpha": [ -11.156, 0.031, -0.947 ] }, { "index": 19, "bpaa": "GG-lys", "z_directions": "-", "nt1": "///a/171", "nt2": "///a/139", "aa": "///t/64", "trs_dist": -13.177, "rot_dist": 81.830, "six_params": [ -1.526, -7.660, -10.613, -73.775, 35.041, 5.576 ], "C_alpha": [ -3.114, -12.426, -3.075 ] }, { "index": 20, "bpaa": "GC-lys", "z_directions": "-", "nt1": "///a/186", "nt2": "///a/179", "aa": "///t/76", "trs_dist": -12.027, "rot_dist": 165.024, "six_params": [ -2.509, 11.454, -2.679, -45.328, 40.834, 162.601 ], "C_alpha": [ -10.235, -2.532, -5.779 ] }, { "index": 21, "bpaa": "GC-gln", "z_directions": "+", "nt1": "///a/221", "nt2": "///a/130", "aa": "///p/63", "trs_dist": -7.827, "rot_dist": 93.944, "six_params": [ -5.404, 5.636, -0.536, 26.271, -37.730, 84.330 ], "C_alpha": [ -7.725, 0.852, -0.952 ] }, { "index": 22, "bpaa": "GC-gly", "z_directions": "+", "nt1": "///a/221", "nt2": "///a/130", "aa": "///p/64", "trs_dist": -7.354, "rot_dist": 13.457, "six_params": [ -7.019, -2.075, -0.715, -5.203, -5.176, 11.287 ], "C_alpha": [ -6.769, -2.779, -0.911 ] }, { "index": 23, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///a/253", "nt2": "///a/261", "aa": "///t/78", "trs_dist": 13.761, "rot_dist": -159.845, "six_params": [ -7.011, 9.220, 7.431, 51.394, -72.933, -151.542 ], "C_alpha": [ 3.333, 12.380, 4.995 ] }, { "index": 24, "bpaa": "GG-arg", "z_directions": "-", "nt1": "///a/254", "nt2": "///a/259", "aa": "///t/78", "trs_dist": -15.960, "rot_dist": -78.315, "six_params": [ 14.506, -0.788, -6.610, 71.019, -28.599, -17.914 ], "C_alpha": [ 15.791, -0.378, -2.285 ] }, { "index": 25, "bpaa": "GC-gln", "z_directions": "+", "nt1": "///a/400", "nt2": "///a/430", "aa": "///d/116", "trs_dist": -11.399, "rot_dist": 88.883, "six_params": [ -10.899, 2.812, -1.801, 76.133, -44.289, 13.388 ], "C_alpha": [ -10.311, 3.450, -3.407 ] }, { "index": 26, "bpaa": "AG-lys", "z_directions": "-", "nt1": "///a/426", "nt2": "///a/404", "aa": "///d/31", "trs_dist": -10.903, "rot_dist": -152.857, "six_params": [ 7.916, 2.200, -7.168, 64.050, 18.880, -147.356 ], "C_alpha": [ 7.669, -4.843, -6.058 ] }, { "index": 27, "bpaa": "AU-gln", "z_directions": "+", "nt1": "///a/429", "nt2": "///a/401", "aa": "///d/116", "trs_dist": 12.674, "rot_dist": 113.012, "six_params": [ -10.530, -6.713, 2.164, -82.382, -22.272, 82.727 ], "C_alpha": [ -5.516, -10.635, 4.115 ] }, { "index": 28, "bpaa": "AU-gln", "z_directions": "+", "nt1": "///a/489", "nt2": "///a/431", "aa": "///d/116", "trs_dist": 10.370, "rot_dist": 112.138, "six_params": [ -8.588, -3.214, 4.842, 75.707, 27.990, 85.804 ], "C_alpha": [ -1.306, -9.609, 3.673 ] }, { "index": 29, "bpaa": "AU-ser", "z_directions": "-", "nt1": "///a/492", "nt2": "///a/433", "aa": "///d/119", "trs_dist": 9.713, "rot_dist": -127.518, "six_params": [ 8.019, -3.743, 4.002, 60.926, -51.954, -109.453 ], "C_alpha": [ -1.528, -8.431, 4.584 ] }, { "index": 30, "bpaa": "AU-his", "z_directions": "+", "nt1": "///a/492", "nt2": "///a/433", "aa": "///d/120", "trs_dist": 10.441, "rot_dist": 67.866, "six_params": [ -0.297, -7.053, 7.693, 63.698, -6.703, 23.741 ], "C_alpha": [ 1.477, -9.961, 2.800 ] }, { "index": 31, "bpaa": "AU-ala", "z_directions": "+", "nt1": "///a/493", "nt2": "///a/399", "aa": "///d/2", "trs_dist": -5.288, "rot_dist": -139.862, "six_params": [ 1.017, 4.781, 2.019, -36.563, 47.463, -133.336 ], "C_alpha": [ 5.231, 0.699, -0.107 ] }, { "index": 32, "bpaa": "AU-arg", "z_directions": "+", "nt1": "///a/493", "nt2": "///a/399", "aa": "///d/3", "trs_dist": 7.764, "rot_dist": 95.179, "six_params": [ 7.190, -2.855, -0.651, -44.354, -39.563, 78.105 ], "C_alpha": [ 6.812, 2.419, 2.867 ] }, { "index": 33, "bpaa": "AU-ile", "z_directions": "+", "nt1": "///a/493", "nt2": "///a/399", "aa": "///d/5", "trs_dist": 9.885, "rot_dist": 168.005, "six_params": [ 7.648, -5.714, 2.566, -61.424, -41.585, 164.948 ], "C_alpha": [ 3.650, 5.339, 7.470 ] }, { "index": 34, "bpaa": "GC-asn", "z_directions": "-", "nt1": "///a/515", "nt2": "///a/522", "aa": "///l/46", "trs_dist": -7.799, "rot_dist": -122.851, "six_params": [ 6.665, 2.356, -3.293, 79.705, -6.151, -102.765 ], "C_alpha": [ 7.193, -2.924, -0.673 ] }, { "index": 35, "bpaa": "GC-ala", "z_directions": "+", "nt1": "///a/515", "nt2": "///a/522", "aa": "///l/48", "trs_dist": -8.136, "rot_dist": -170.803, "six_params": [ -2.842, 7.545, 1.089, -49.859, -13.053, -169.785 ], "C_alpha": [ 6.933, 3.396, -2.497 ] }, { "index": 36, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///a/515", "nt2": "///a/522", "aa": "///l/50", "trs_dist": 10.862, "rot_dist": -128.072, "six_params": [ -2.419, 6.994, 7.950, -75.008, 6.113, -112.882 ], "C_alpha": [ 7.500, 7.546, 2.163 ] }, { "index": 37, "bpaa": "GC-asn", "z_directions": "+", "nt1": "///a/521", "nt2": "///a/516", "aa": "///l/46", "trs_dist": 7.702, "rot_dist": -99.503, "six_params": [ 0.349, 4.189, 6.454, -22.497, 84.610, -53.034 ], "C_alpha": [ 6.166, 2.770, 3.670 ] }, { "index": 38, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///a/521", "nt2": "///a/516", "aa": "///l/50", "trs_dist": -12.048, "rot_dist": -80.434, "six_params": [ 10.031, -2.694, -6.106, 20.610, -64.645, -46.070 ], "C_alpha": [ 10.082, -6.584, -0.192 ] }, { "index": 39, "bpaa": "GC-asp", "z_directions": "-", "nt1": "///a/521", "nt2": "///a/516", "aa": "///l/89", "trs_dist": -7.931, "rot_dist": 113.414, "six_params": [ 4.957, -1.038, -6.103, -68.829, -3.103, 96.534 ], "C_alpha": [ 6.585, 0.970, -4.313 ] }, { "index": 40, "bpaa": "GA-asn", "z_directions": "+", "nt1": "///a/523", "nt2": "///a/514", "aa": "///l/46", "trs_dist": -8.636, "rot_dist": -131.978, "six_params": [ 6.543, 5.350, 1.776, 39.246, 60.060, -119.714 ], "C_alpha": [ 7.883, -3.526, -0.068 ] }, { "index": 41, "bpaa": "GA-ser", "z_directions": "-", "nt1": "///a/523", "nt2": "///a/514", "aa": "///l/47", "trs_dist": 7.830, "rot_dist": -94.496, "six_params": [ 3.840, -2.029, 6.515, 11.718, 82.155, -50.010 ], "C_alpha": [ 5.389, -5.267, 2.195 ] }, { "index": 42, "bpaa": "AU-gln", "z_directions": "-", "nt1": "///a/532", "nt2": "///a/507", "aa": "///l/112", "trs_dist": 11.901, "rot_dist": 97.496, "six_params": [ 10.872, 4.817, 0.487, -5.043, -49.884, 86.571 ], "C_alpha": [ 3.679, 10.226, 4.815 ] }, { "index": 43, "bpaa": "AU-gln", "z_directions": "-", "nt1": "///a/533", "nt2": "///a/506", "aa": "///l/112", "trs_dist": 12.174, "rot_dist": 77.397, "six_params": [ 11.636, 3.142, -1.710, -23.699, -53.947, 52.633 ], "C_alpha": [ 8.659, 7.943, 3.123 ] }, { "index": 44, "bpaa": "GC-gln", "z_directions": "-", "nt1": "///a/534", "nt2": "///a/505", "aa": "///d/40", "trs_dist": 9.555, "rot_dist": -129.103, "six_params": [ -0.985, -8.697, 3.834, -34.966, -68.812, -113.297 ], "C_alpha": [ -8.150, -0.916, 4.900 ] }, { "index": 45, "bpaa": "GC-his", "z_directions": "+", "nt1": "///a/534", "nt2": "///a/505", "aa": "///d/41", "trs_dist": 10.807, "rot_dist": -54.463, "six_params": [ -7.583, -7.175, 2.795, 10.368, 32.859, -42.839 ], "C_alpha": [ -8.860, -4.589, 4.159 ] }, { "index": 46, "bpaa": "AU-arg", "z_directions": "+", "nt1": "///a/557", "nt2": "///a/878", "aa": "///l/12", "trs_dist": 9.392, "rot_dist": 146.539, "six_params": [ -7.120, -4.140, 4.515, -14.609, -2.989, 146.245 ], "C_alpha": [ 1.281, -7.947, 4.816 ] }, { "index": 47, "bpaa": "GC-ala", "z_directions": "-", "nt1": "///a/561", "nt2": "///a/877", "aa": "///l/2", "trs_dist": 6.993, "rot_dist": 102.265, "six_params": [ 6.388, -2.817, 0.404, 27.999, -58.687, 83.828 ], "C_alpha": [ 6.282, 1.300, 2.777 ] }, { "index": 48, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///a/561", "nt2": "///a/877", "aa": "///l/12", "trs_dist": -9.651, "rot_dist": -64.181, "six_params": [ 5.954, 2.005, -7.326, 23.529, 12.810, -58.872 ], "C_alpha": [ 6.186, 0.553, -7.374 ] }, { "index": 49, "bpaa": "GC-ala", "z_directions": "-", "nt1": "///a/562", "nt2": "///a/876", "aa": "///l/2", "trs_dist": -4.725, "rot_dist": 91.794, "six_params": [ 3.360, -1.516, -2.956, -6.870, -61.970, 71.138 ], "C_alpha": [ 4.508, 1.206, -0.719 ] }, { "index": 50, "bpaa": "GC-gln", "z_directions": "-", "nt1": "///a/562", "nt2": "///a/876", "aa": "///l/6", "trs_dist": -9.930, "rot_dist": -36.327, "six_params": [ 9.628, -2.252, 0.920, 31.291, 10.455, -15.422 ], "C_alpha": [ 9.249, -3.569, -0.584 ] }, { "index": 51, "bpaa": "GC-lys", "z_directions": "+", "nt1": "///a/562", "nt2": "///a/876", "aa": "///l/10", "trs_dist": -12.693, "rot_dist": -142.651, "six_params": [ 3.854, 5.061, -10.984, -2.928, -85.195, -128.411 ], "C_alpha": [ 8.826, -7.184, -5.584 ] }, { "index": 52, "bpaa": "GC-gln", "z_directions": "-", "nt1": "///a/569", "nt2": "///a/874", "aa": "///l/6", "trs_dist": -11.897, "rot_dist": -102.072, "six_params": [ 6.263, -7.878, -6.344, 42.640, -32.782, -90.328 ], "C_alpha": [ 1.935, -9.600, -6.749 ] }, { "index": 53, "bpaa": "GC-tyr", "z_directions": "+", "nt1": "///a/591", "nt2": "///a/637", "aa": "///h/86", "trs_dist": 9.964, "rot_dist": 82.142, "six_params": [ -6.875, 1.269, 7.101, -58.088, 8.165, 60.293 ], "C_alpha": [ -7.873, 0.831, 6.029 ] }, { "index": 54, "bpaa": "GC-glu", "z_directions": "+", "nt1": "///a/591", "nt2": "///a/637", "aa": "///h/124", "trs_dist": 8.961, "rot_dist": -107.699, "six_params": [ -5.912, -2.761, 6.142, 60.537, 58.537, -74.669 ], "C_alpha": [ -5.833, -3.235, 5.973 ] }, { "index": 55, "bpaa": "AU-asn", "z_directions": "-", "nt1": "///a/633", "nt2": "///a/593", "aa": "///h/107", "trs_dist": 8.705, "rot_dist": -170.732, "six_params": [ 1.336, -8.592, 0.408, -70.176, 33.347, -168.092 ], "C_alpha": [ -6.670, -2.842, 4.828 ] }, { "index": 56, "bpaa": "AU-asn", "z_directions": "-", "nt1": "///a/634", "nt2": "///a/592", "aa": "///h/107", "trs_dist": 7.347, "rot_dist": 172.476, "six_params": [ 0.573, 6.476, -3.422, 51.171, -47.859, 170.808 ], "C_alpha": [ -7.113, 1.851, 0.139 ] }, { "index": 57, "bpaa": "GC-tyr", "z_directions": "+", "nt1": "///a/648", "nt2": "///a/748", "aa": "///o/69", "trs_dist": -11.230, "rot_dist": 107.330, "six_params": [ -9.362, -5.740, 2.349, 74.914, 15.749, 81.994 ], "C_alpha": [ -2.769, -10.867, -0.437 ] }, { "index": 58, "bpaa": "AU-gly", "z_directions": "-", "nt1": "///a/649", "nt2": "///a/745", "aa": "///o/23", "trs_dist": 7.850, "rot_dist": -168.538, "six_params": [ 6.287, -4.655, 0.649, -34.095, -36.036, -167.369 ], "C_alpha": [ -3.361, -5.996, 3.850 ] }, { "index": 59, "bpaa": "AU-gln", "z_directions": "-", "nt1": "///a/649", "nt2": "///a/745", "aa": "///o/28", "trs_dist": 11.953, "rot_dist": -152.812, "six_params": [ 0.624, -11.925, 0.526, -59.832, 18.747, -148.050 ], "C_alpha": [ -9.389, -3.930, 6.268 ] }, { "index": 60, "bpaa": "GC-thr", "z_directions": "-", "nt1": "///a/650", "nt2": "///a/744", "aa": "///o/22", "trs_dist": 8.679, "rot_dist": -150.176, "six_params": [ 0.667, -5.717, 6.496, 62.246, 8.149, -144.911 ], "C_alpha": [ -7.546, -3.438, 2.541 ] }, { "index": 61, "bpaa": "GC-gly", "z_directions": "-", "nt1": "///a/650", "nt2": "///a/744", "aa": "///o/23", "trs_dist": -6.464, "rot_dist": 160.963, "six_params": [ -2.646, 5.126, -2.916, 30.034, 31.196, 159.503 ], "C_alpha": [ -6.105, -2.107, -0.698 ] }, { "index": 62, "bpaa": "GC-gln", "z_directions": "-", "nt1": "///a/650", "nt2": "///a/744", "aa": "///o/28", "trs_dist": 11.126, "rot_dist": -176.803, "six_params": [ -2.641, -9.931, -4.264, -42.406, 25.535, -176.479 ], "C_alpha": [ -10.775, 2.765, 0.255 ] }, { "index": 63, "bpaa": "AU-thr", "z_directions": "-", "nt1": "///a/652", "nt2": "///a/742", "aa": "///o/22", "trs_dist": -10.117, "rot_dist": 159.698, "six_params": [ 4.833, 8.662, 1.991, -68.573, 5.748, 155.332 ], "C_alpha": [ -6.991, 6.432, -3.471 ] }, { "index": 64, "bpaa": "GU-ser", "z_directions": "+", "nt1": "///a/660", "nt2": "///a/734", "aa": "///o/52", "trs_dist": -8.458, "rot_dist": -59.458, "six_params": [ -7.196, -3.332, 2.943, 42.423, -41.253, -6.095 ], "C_alpha": [ -7.725, -3.274, -1.092 ] }, { "index": 65, "bpaa": "GC-his", "z_directions": "-", "nt1": "///a/661", "nt2": "///a/733", "aa": "///o/42", "trs_dist": -10.831, "rot_dist": 172.161, "six_params": [ -7.063, 7.098, -4.128, 38.281, -50.447, 170.787 ], "C_alpha": [ -8.911, -4.477, -4.221 ] }, { "index": 66, "bpaa": "GC-asn", "z_directions": "-", "nt1": "///a/661", "nt2": "///a/733", "aa": "///o/46", "trs_dist": -9.523, "rot_dist": 177.992, "six_params": [ -0.147, 9.154, -2.622, 27.536, -5.640, 177.930 ], "C_alpha": [ -9.500, 0.106, -0.372 ] }, { "index": 67, "bpaa": "GC-asp", "z_directions": "-", "nt1": "///a/661", "nt2": "///a/733", "aa": "///o/49", "trs_dist": -9.081, "rot_dist": 110.901, "six_params": [ 0.218, 7.569, -5.014, 27.903, 24.950, 106.435 ], "C_alpha": [ -7.218, 4.574, -2.986 ] }, { "index": 68, "bpaa": "GC-asn", "z_directions": "-", "nt1": "///a/662", "nt2": "///a/732", "aa": "///o/46", "trs_dist": -10.760, "rot_dist": 158.284, "six_params": [ 2.492, 8.712, -5.802, 23.482, -23.002, 157.346 ], "C_alpha": [ -8.777, 5.243, -3.309 ] }, { "index": 69, "bpaa": "GA-his", "z_directions": "+", "nt1": "///a/668", "nt2": "///a/710", "aa": "///k/118", "trs_dist": -7.276, "rot_dist": 77.574, "six_params": [ -6.160, -0.302, -3.861, 62.184, 43.700, 16.857 ], "C_alpha": [ -7.194, 0.013, -1.021 ] }, { "index": 70, "bpaa": "GA-asn", "z_directions": "+", "nt1": "///a/668", "nt2": "///a/710", "aa": "///k/119", "trs_dist": -6.821, "rot_dist": -31.962, "six_params": [ -5.086, -4.190, -1.758, -11.203, 24.439, -17.447 ], "C_alpha": [ -5.881, -3.438, -0.223 ] }, { "index": 71, "bpaa": "GA-gly", "z_directions": "-", "nt1": "///a/668", "nt2": "///a/710", "aa": "///k/120", "trs_dist": 7.276, "rot_dist": 83.866, "six_params": [ -5.678, -4.532, -0.391, -81.477, 19.841, 1.333 ], "C_alpha": [ -5.346, -3.433, 3.537 ] }, { "index": 72, "bpaa": "AA-pro", "z_directions": "-", "nt1": "///a/669", "nt2": "///a/709", "aa": "///k/117", "trs_dist": -7.690, "rot_dist": 83.723, "six_params": [ -2.011, 7.263, -1.528, 10.160, 38.711, 75.140 ], "C_alpha": [ -6.247, 4.420, -0.158 ] }, { "index": 73, "bpaa": "AA-his", "z_directions": "+", "nt1": "///a/669", "nt2": "///a/709", "aa": "///k/118", "trs_dist": -7.637, "rot_dist": -83.787, "six_params": [ -3.969, 0.369, -6.514, 79.066, 27.577, -3.197 ], "C_alpha": [ -5.136, 4.214, -3.754 ] }, { "index": 74, "bpaa": "AA-asn", "z_directions": "+", "nt1": "///a/669", "nt2": "///a/709", "aa": "///k/119", "trs_dist": -6.513, "rot_dist": -47.922, "six_params": [ -4.299, -1.562, -4.636, 3.777, 26.616, -40.045 ], "C_alpha": [ -5.423, 0.453, -3.566 ] }, { "index": 75, "bpaa": "AA-gly", "z_directions": "-", "nt1": "///a/669", "nt2": "///a/709", "aa": "///k/120", "trs_dist": 5.150, "rot_dist": -77.223, "six_params": [ -4.694, -0.723, -1.991, -65.984, 35.191, -20.852 ], "C_alpha": [ -5.135, -0.364, 0.132 ] }, { "index": 76, "bpaa": "AG-cys", "z_directions": "+", "nt1": "///a/670", "nt2": "///a/708", "aa": "///k/121", "trs_dist": -8.113, "rot_dist": -104.757, "six_params": [ -7.423, -2.729, 1.808, -29.007, -82.849, -64.216 ], "C_alpha": [ -7.453, 1.273, -2.922 ] }, { "index": 77, "bpaa": "GU-gly", "z_directions": "+", "nt1": "///a/677", "nt2": "///a/701", "aa": "///k/39", "trs_dist": -8.177, "rot_dist": 94.800, "six_params": [ -7.272, 1.056, -3.586, -69.954, 39.960, 54.937 ], "C_alpha": [ -7.007, -4.095, -0.995 ] }, { "index": 78, "bpaa": "GU-asn", "z_directions": "+", "nt1": "///a/677", "nt2": "///a/701", "aa": "///k/40", "trs_dist": 7.628, "rot_dist": 138.933, "six_params": [ -3.219, 5.094, 4.677, -12.185, -50.251, 134.120 ], "C_alpha": [ -6.909, -2.254, 2.319 ] }, { "index": 79, "bpaa": "GU-ile", "z_directions": "-", "nt1": "///a/679", "nt2": "///a/699", "aa": "///k/31", "trs_dist": -12.067, "rot_dist": 129.911, "six_params": [ -2.999, 11.606, -1.388, 1.458, -6.174, 129.829 ], "C_alpha": [ -11.756, 2.272, -1.392 ] }, { "index": 80, "bpaa": "GU-arg", "z_directions": "+", "nt1": "///a/684", "nt2": "///a/691", "aa": "///k/53", "trs_dist": 12.886, "rot_dist": -94.496, "six_params": [ 9.286, 8.412, 3.012, 12.961, 34.527, -88.621 ], "C_alpha": [ 12.808, -1.075, 1.048 ] }, { "index": 81, "bpaa": "GU-lys", "z_directions": "+", "nt1": "///a/684", "nt2": "///a/691", "aa": "///k/57", "trs_dist": 15.169, "rot_dist": -172.642, "six_params": [ -1.683, 15.075, 0.106, 29.139, -45.241, -171.747 ], "C_alpha": [ 14.448, 3.395, 3.146 ] }, { "index": 82, "bpaa": "GA-asn", "z_directions": "-", "nt1": "///a/685", "nt2": "///a/690", "aa": "///k/28", "trs_dist": 10.918, "rot_dist": -17.932, "six_params": [ 10.389, 3.293, 0.653, -4.942, -16.886, -3.477 ], "C_alpha": [ 10.301, 3.050, 2.014 ] }, { "index": 83, "bpaa": "GA-arg", "z_directions": "+", "nt1": "///a/685", "nt2": "///a/690", "aa": "///k/53", "trs_dist": 10.721, "rot_dist": -121.963, "six_params": [ 9.628, 4.544, 1.266, 26.340, 14.572, -119.693 ], "C_alpha": [ 8.607, -6.317, 1.052 ] }, { "index": 84, "bpaa": "GA-lys", "z_directions": "+", "nt1": "///a/685", "nt2": "///a/690", "aa": "///k/57", "trs_dist": 12.948, "rot_dist": 152.984, "six_params": [ -0.631, -12.931, 0.182, -26.294, 60.171, 147.720 ], "C_alpha": [ 12.120, -3.185, 3.271 ] }, { "index": 85, "bpaa": "AU-trp", "z_directions": "-", "nt1": "///a/698", "nt2": "///a/680", "aa": "///k/44", "trs_dist": 9.937, "rot_dist": -97.742, "six_params": [ 5.661, -6.641, 4.754, -18.426, -0.438, -96.427 ], "C_alpha": [ -0.558, -8.052, 5.785 ] }, { "index": 86, "bpaa": "AU-gly", "z_directions": "-", "nt1": "///a/700", "nt2": "///a/678", "aa": "///k/39", "trs_dist": 8.483, "rot_dist": 175.703, "six_params": [ -4.932, 3.816, 5.751, -59.288, 59.517, 174.216 ], "C_alpha": [ -6.772, -1.723, 4.809 ] }, { "index": 87, "bpaa": "AU-asn", "z_directions": "-", "nt1": "///a/700", "nt2": "///a/678", "aa": "///k/40", "trs_dist": 6.949, "rot_dist": 95.998, "six_params": [ -6.763, 1.225, -1.027, 39.736, 37.793, 82.154 ], "C_alpha": [ -5.748, -3.549, 1.647 ] }, { "index": 88, "bpaa": "AU-ala", "z_directions": "-", "nt1": "///a/700", "nt2": "///a/678", "aa": "///k/41", "trs_dist": -6.341, "rot_dist": -149.818, "six_params": [ -0.851, -5.736, -2.567, -15.781, -60.620, -144.512 ], "C_alpha": [ -5.649, -2.178, -1.870 ] }, { "index": 89, "bpaa": "GU-cys", "z_directions": "+", "nt1": "///a/707", "nt2": "///a/671", "aa": "///k/121", "trs_dist": 9.698, "rot_dist": -139.148, "six_params": [ -3.162, -2.799, 8.730, 64.494, 61.625, -121.298 ], "C_alpha": [ -5.791, -4.515, 6.321 ] }, { "index": 90, "bpaa": "GG-his", "z_directions": "-", "nt1": "///a/721", "nt2": "///a/724", "aa": "///o/51", "trs_dist": 9.953, "rot_dist": 120.901, "six_params": [ 6.412, 7.238, -2.358, 35.756, -68.530, 101.682 ], "C_alpha": [ -1.668, 9.053, 3.795 ] }, { "index": 91, "bpaa": "AU-thr", "z_directions": "+", "nt1": "///a/743", "nt2": "///a/651", "aa": "///o/22", "trs_dist": 7.262, "rot_dist": -65.661, "six_params": [ -6.058, -2.064, -3.433, -7.498, 65.027, -5.473 ], "C_alpha": [ -7.006, -1.823, 0.501 ] }, { "index": 92, "bpaa": "AU-gly", "z_directions": "+", "nt1": "///a/743", "nt2": "///a/651", "aa": "///o/23", "trs_dist": 6.536, "rot_dist": 63.242, "six_params": [ -4.108, -0.832, 5.015, -21.029, -34.661, 49.606 ], "C_alpha": [ -4.948, -2.311, 3.641 ] }, { "index": 93, "bpaa": "AU-gln", "z_directions": "-", "nt1": "///a/749", "nt2": "///a/580", "aa": "///h/4", "trs_dist": -9.338, "rot_dist": 102.247, "six_params": [ -4.424, 3.945, -7.216, -6.895, 70.885, 78.932 ], "C_alpha": [ -8.366, -2.200, -3.526 ] }, { "index": 94, "bpaa": "GU-arg", "z_directions": "+", "nt1": "///a/772", "nt2": "///a/798", "aa": "///k/122", "trs_dist": 9.740, "rot_dist": -92.490, "six_params": [ -9.024, -3.283, -1.626, -43.518, 19.351, -81.786 ], "C_alpha": [ -9.046, 3.376, 1.207 ] }, { "index": 95, "bpaa": "AU-asp", "z_directions": "+", "nt1": "///a/819", "nt2": "///a/869", "aa": "///h/9", "trs_dist": -9.091, "rot_dist": 101.424, "six_params": [ -5.052, 7.026, 2.785, -65.496, -48.584, 66.525 ], "C_alpha": [ -7.823, 3.009, -3.547 ] }, { "index": 96, "bpaa": "AU-thr", "z_directions": "+", "nt1": "///a/819", "nt2": "///a/869", "aa": "///h/12", "trs_dist": -8.014, "rot_dist": 59.998, "six_params": [ -7.808, 1.662, -0.698, -47.947, 2.331, 37.116 ], "C_alpha": [ -7.816, -1.286, -1.156 ] }, { "index": 97, "bpaa": "AU-asn", "z_directions": "+", "nt1": "///a/819", "nt2": "///a/869", "aa": "///h/16", "trs_dist": 9.532, "rot_dist": 79.779, "six_params": [ -7.459, -2.687, 5.292, -57.315, -22.264, 53.560 ], "C_alpha": [ -7.442, -3.963, 4.445 ] }, { "index": 98, "bpaa": "GC-his", "z_directions": "+", "nt1": "///a/849", "nt2": "///a/825", "aa": "///u/56", "trs_dist": -11.512, "rot_dist": 41.498, "six_params": [ -10.411, 4.888, 0.495, -14.764, -18.982, 34.074 ], "C_alpha": [ -11.253, 1.583, -1.849 ] }, { "index": 99, "bpaa": "GA-pro", "z_directions": "+", "nt1": "///a/852", "nt2": "///a/822", "aa": "///b/25", "trs_dist": -11.162, "rot_dist": -49.105, "six_params": [ -9.667, -4.501, -3.299, -6.600, -3.095, -48.594 ], "C_alpha": [ -10.700, -0.334, -3.286 ] }, { "index": 100, "bpaa": "GC-asn", "z_directions": "-", "nt1": "///a/868", "nt2": "///a/820", "aa": "///h/16", "trs_dist": 8.868, "rot_dist": 171.440, "six_params": [ -3.243, 8.023, -1.936, 16.047, 67.271, 169.599 ], "C_alpha": [ -8.352, -2.711, 1.256 ] }, { "index": 101, "bpaa": "GC-ser", "z_directions": "+", "nt1": "///a/871", "nt2": "///a/817", "aa": "///h/2", "trs_dist": -9.467, "rot_dist": -139.726, "six_params": [ -0.896, -5.743, -7.472, -77.533, -2.710, -127.578 ], "C_alpha": [ -8.559, -3.352, -2.249 ] }, { "index": 102, "bpaa": "GC-gln", "z_directions": "+", "nt1": "///a/875", "nt2": "///a/563", "aa": "///l/6", "trs_dist": 10.752, "rot_dist": -130.213, "six_params": [ -5.379, 9.166, 1.627, -5.486, 35.734, -127.437 ], "C_alpha": [ 6.240, 8.309, 2.758 ] }, { "index": 103, "bpaa": "AU-arg", "z_directions": "-", "nt1": "///a/929", "nt2": "///a/1374", "aa": "///g/3", "trs_dist": -6.140, "rot_dist": 96.032, "six_params": [ 3.814, -1.992, -4.381, -62.205, 40.611, 65.894 ], "C_alpha": [ 4.275, -2.325, -3.731 ] }, { "index": 104, "bpaa": "GC-gln", "z_directions": "+", "nt1": "///a/935", "nt2": "///a/1336", "aa": "///i/126", "trs_dist": -10.610, "rot_dist": 66.719, "six_params": [ -9.562, -1.796, 4.232, 16.342, -47.726, 45.183 ], "C_alpha": [ -8.795, -5.916, -0.275 ] }, { "index": 105, "bpaa": "GU-gln", "z_directions": "+", "nt1": "///a/936", "nt2": "///a/1335", "aa": "///i/126", "trs_dist": -11.115, "rot_dist": 63.068, "six_params": [ -11.020, 1.057, 0.992, 16.474, -52.748, 31.674 ], "C_alpha": [ -10.293, -1.604, -3.854 ] }, { "index": 106, "bpaa": "AU-asn", "z_directions": "+", "nt1": "///a/943", "nt2": "///a/1226", "aa": "///m/105", "trs_dist": 9.299, "rot_dist": 168.634, "six_params": [ 3.763, -6.610, 5.349, -24.715, 79.974, 164.720 ], "C_alpha": [ 6.525, 5.968, 2.913 ] }, { "index": 107, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///a/945", "nt2": "///a/1224", "aa": "///m/101", "trs_dist": 12.959, "rot_dist": -83.344, "six_params": [ 10.267, 7.175, 3.323, -75.748, -31.503, -16.203 ], "C_alpha": [ 10.778, 7.136, 0.743 ] }, { "index": 108, "bpaa": "GC-thr", "z_directions": "-", "nt1": "///a/945", "nt2": "///a/1224", "aa": "///m/104", "trs_dist": 8.019, "rot_dist": 43.563, "six_params": [ 7.976, 0.753, -0.337, 34.002, -26.124, 7.877 ], "C_alpha": [ 7.752, 1.064, 1.679 ] }, { "index": 109, "bpaa": "GC-lys", "z_directions": "-", "nt1": "///a/947", "nt2": "///a/1222", "aa": "///m/103", "trs_dist": -7.562, "rot_dist": -97.507, "six_params": [ 6.627, 3.597, -0.577, -9.274, -6.004, -97.038 ], "C_alpha": [ 7.064, -2.633, -0.522 ] }, { "index": 110, "bpaa": "GC-lys", "z_directions": "-", "nt1": "///a/948", "nt2": "///a/1220", "aa": "///m/103", "trs_dist": -6.586, "rot_dist": -146.090, "six_params": [ 5.211, -1.137, -3.865, 7.530, -0.511, -146.014 ], "C_alpha": [ 0.681, -5.253, -3.912 ] }, { "index": 111, "bpaa": "AU-thr", "z_directions": "+", "nt1": "///a/953", "nt2": "///a/951", "aa": "///s/77", "trs_dist": 9.670, "rot_dist": 173.020, "six_params": [ -9.269, 1.735, -2.142, 63.359, 12.748, 171.739 ], "C_alpha": [ -2.987, -9.199, 0.078 ] }, { "index": 112, "bpaa": "AU-arg", "z_directions": "+", "nt1": "///a/953", "nt2": "///a/951", "aa": "///s/78", "trs_dist": 8.012, "rot_dist": 123.806, "six_params": [ -5.446, -3.253, 4.894, 65.484, -28.398, 109.119 ], "C_alpha": [ 0.471, -7.925, 0.976 ] }, { "index": 113, "bpaa": "UU-arg", "z_directions": "-", "nt1": "///a/954", "nt2": "///a/950", "aa": "///s/78", "trs_dist": 9.131, "rot_dist": 76.965, "six_params": [ 2.876, 8.589, -1.158, 18.360, -59.873, 47.232 ], "C_alpha": [ -0.934, 8.899, 1.743 ] }, { "index": 114, "bpaa": "GC-his", "z_directions": "+", "nt1": "///a/957", "nt2": "///a/966", "aa": "///j/56", "trs_dist": -10.870, "rot_dist": 84.986, "six_params": [ -8.898, 6.118, -1.243, 1.304, -44.270, 74.485 ], "C_alpha": [ -9.909, 0.208, -4.431 ] }, { "index": 115, "bpaa": "GC-val", "z_directions": "+", "nt1": "///a/957", "nt2": "///a/966", "aa": "///j/57", "trs_dist": -9.586, "rot_dist": -12.825, "six_params": [ -8.383, -3.614, -2.922, -5.429, -2.159, -11.422 ], "C_alpha": [ -8.651, -2.903, -2.885 ] }, { "index": 116, "bpaa": "GC-his", "z_directions": "-", "nt1": "///a/967", "nt2": "///a/956", "aa": "///j/56", "trs_dist": -9.778, "rot_dist": 82.140, "six_params": [ -1.738, 7.941, -5.434, 18.216, -19.057, 78.515 ], "C_alpha": [ -6.234, 6.140, -4.324 ] }, { "index": 117, "bpaa": "AA-ser", "z_directions": "+", "nt1": "///a/972", "nt2": "///a/1354", "aa": "///n/58", "trs_dist": 8.437, "rot_dist": 161.899, "six_params": [ -2.754, -7.369, 3.049, -16.603, 37.881, 160.641 ], "C_alpha": [ 6.448, -2.561, 4.796 ] }, { "index": 118, "bpaa": "AU-arg", "z_directions": "-", "nt1": "///a/1049", "nt2": "///a/1199", "aa": "///c/156", "trs_dist": 11.214, "rot_dist": -171.123, "six_params": [ -0.783, -10.762, -3.053, -75.633, -41.084, -167.845 ], "C_alpha": [ -10.492, -0.152, 3.958 ] }, { "index": 119, "bpaa": "AU-gly", "z_directions": "+", "nt1": "///a/1049", "nt2": "///a/1199", "aa": "///c/194", "trs_dist": 7.566, "rot_dist": 139.699, "six_params": [ -4.040, 5.254, 3.650, 2.413, -81.235, 126.005 ], "C_alpha": [ -7.132, -2.533, 0.231 ] }, { "index": 120, "bpaa": "GC-glu", "z_directions": "-", "nt1": "///a/1051", "nt2": "///a/1197", "aa": "///c/188", "trs_dist": -11.938, "rot_dist": 132.362, "six_params": [ 2.386, 10.766, -4.575, 13.776, 29.736, 130.211 ], "C_alpha": [ -9.667, 5.917, -3.726 ] }, { "index": 121, "bpaa": "GU-pro", "z_directions": "-", "nt1": "///a/1052", "nt2": "///a/1193", "aa": "///j/55", "trs_dist": 7.908, "rot_dist": -117.746, "six_params": [ 0.535, -6.502, 4.469, -8.498, -88.302, -87.400 ], "C_alpha": [ -6.388, -2.488, 4.001 ] }, { "index": 122, "bpaa": "GC-gln", "z_directions": "-", "nt1": "///a/1055", "nt2": "///a/1189", "aa": "///c/3", "trs_dist": 10.768, "rot_dist": 87.448, "six_params": [ 10.631, 1.394, -0.990, 1.157, -43.243, 77.951 ], "C_alpha": [ 7.084, 7.512, 3.015 ] }, { "index": 123, "bpaa": "UU-gln", "z_directions": "-", "nt1": "///a/1056", "nt2": "///a/1188", "aa": "///c/3", "trs_dist": 9.057, "rot_dist": 74.351, "six_params": [ 8.457, -1.573, -2.835, -40.106, -44.148, 46.610 ], "C_alpha": [ 8.792, 1.760, 1.181 ] }, { "index": 124, "bpaa": "GC-asn", "z_directions": "-", "nt1": "///a/1066", "nt2": "///a/1097", "aa": "///b/103", "trs_dist": 10.180, "rot_dist": -175.948, "six_params": [ 5.553, -8.090, 2.710, -27.614, -53.947, -175.307 ], "C_alpha": [ -6.776, -3.565, 6.687 ] }, { "index": 125, "bpaa": "GC-thr", "z_directions": "+", "nt1": "///a/1066", "nt2": "///a/1097", "aa": "///b/106", "trs_dist": 8.547, "rot_dist": 82.632, "six_params": [ -7.880, -0.478, 3.274, 81.281, -14.763, 2.071 ], "C_alpha": [ -8.136, -2.295, 1.215 ] }, { "index": 126, "bpaa": "GC-lys", "z_directions": "-", "nt1": "///a/1075", "nt2": "///a/1070", "aa": "///e/53", "trs_dist": 10.202, "rot_dist": -50.768, "six_params": [ 5.777, -8.240, 1.678, 10.782, -6.771, -49.249 ], "C_alpha": [ 1.673, -9.978, 1.248 ] }, { "index": 127, "bpaa": "AU-gly", "z_directions": "+", "nt1": "///a/1096", "nt2": "///a/1067", "aa": "///b/98", "trs_dist": -9.865, "rot_dist": 52.340, "six_params": [ -5.426, 4.469, -6.922, 46.103, 17.081, 18.538 ], "C_alpha": [ -7.224, 5.562, -3.769 ] }, { "index": 128, "bpaa": "AU-asn", "z_directions": "+", "nt1": "///a/1096", "nt2": "///a/1067", "aa": "///b/103", "trs_dist": -8.946, "rot_dist": 72.253, "six_params": [ -8.900, 0.523, 0.732, -50.926, -32.545, 41.630 ], "C_alpha": [ -8.217, -2.870, -1.998 ] }, { "index": 129, "bpaa": "AU-thr", "z_directions": "-", "nt1": "///a/1096", "nt2": "///a/1067", "aa": "///b/106", "trs_dist": 9.230, "rot_dist": -162.981, "six_params": [ 0.649, -9.189, 0.565, -49.123, 63.265, -157.709 ], "C_alpha": [ -7.706, -3.434, 3.731 ] }, { "index": 130, "bpaa": "AU-pro", "z_directions": "-", "nt1": "///a/1145", "nt2": "///a/1116", "aa": "///j/41", "trs_dist": -8.499, "rot_dist": -175.228, "six_params": [ -5.194, -6.558, -1.501, 51.414, 19.919, -174.616 ], "C_alpha": [ -5.746, 5.390, -3.293 ] }, { "index": 131, "bpaa": "AG-arg", "z_directions": "-", "nt1": "///a/1151", "nt2": "///a/1172", "aa": "///i/99", "trs_dist": 11.284, "rot_dist": -83.715, "six_params": [ 10.462, 4.181, -0.623, -11.376, -45.955, -71.175 ], "C_alpha": [ 10.597, -2.292, 3.098 ] }, { "index": 132, "bpaa": "GC-leu", "z_directions": "-", "nt1": "///a/1181", "nt2": "///a/1107", "aa": "///c/178", "trs_dist": 10.797, "rot_dist": -87.661, "six_params": [ 4.475, -9.535, 2.375, -23.098, -50.325, -70.891 ], "C_alpha": [ -2.890, -8.609, 5.840 ] }, { "index": 133, "bpaa": "GC-ser", "z_directions": "-", "nt1": "///a/1181", "nt2": "///a/1107", "aa": "///n/100", "trs_dist": -8.972, "rot_dist": 164.512, "six_params": [ 3.184, 8.252, -1.502, -13.215, 13.909, 164.291 ], "C_alpha": [ -7.524, 3.984, -2.812 ] }, { "index": 134, "bpaa": "GC-lys", "z_directions": "+", "nt1": "///a/1187", "nt2": "///a/1057", "aa": "///e/27", "trs_dist": -12.170, "rot_dist": -95.402, "six_params": [ -8.835, 1.808, -8.172, -48.355, 71.435, -45.508 ], "C_alpha": [ -11.262, 4.295, -1.673 ] }, { "index": 135, "bpaa": "AU-gln", "z_directions": "+", "nt1": "///a/1191", "nt2": "///a/1054", "aa": "///c/3", "trs_dist": -10.483, "rot_dist": 86.808, "six_params": [ -2.623, -9.767, -2.758, 32.824, -17.846, 79.842 ], "C_alpha": [ 3.975, -7.788, -5.769 ] }, { "index": 136, "bpaa": "AU-ser", "z_directions": "+", "nt1": "///a/1191", "nt2": "///a/1054", "aa": "///j/54", "trs_dist": 9.859, "rot_dist": 134.956, "six_params": [ -8.959, 0.182, 4.112, -50.127, -23.030, 128.791 ], "C_alpha": [ -5.492, -7.973, 1.828 ] }, { "index": 137, "bpaa": "GC-ser", "z_directions": "+", "nt1": "///a/1192", "nt2": "///a/1053", "aa": "///j/54", "trs_dist": -8.639, "rot_dist": 115.559, "six_params": [ -7.413, 4.247, 1.282, -58.170, -14.526, 104.020 ], "C_alpha": [ -7.767, -3.288, -1.853 ] }, { "index": 138, "bpaa": "GC-pro", "z_directions": "-", "nt1": "///a/1192", "nt2": "///a/1053", "aa": "///j/55", "trs_dist": 8.373, "rot_dist": -159.554, "six_params": [ -1.270, -7.393, 3.719, 28.722, 76.349, -152.887 ], "C_alpha": [ -7.778, -2.554, 1.905 ] }, { "index": 139, "bpaa": "AU-val", "z_directions": "-", "nt1": "///a/1198", "nt2": "///a/1050", "aa": "///c/195", "trs_dist": 7.992, "rot_dist": -140.222, "six_params": [ -1.623, -7.778, 0.862, 1.325, -49.235, -136.046 ], "C_alpha": [ -7.890, -1.208, 0.025 ] }, { "index": 140, "bpaa": "AU-gly", "z_directions": "-", "nt1": "///a/1213", "nt2": "///a/980", "aa": "///s/54", "trs_dist": 8.383, "rot_dist": 117.197, "six_params": [ -8.004, 1.449, 2.027, -32.410, 44.186, 108.131 ], "C_alpha": [ -5.868, -4.063, 4.391 ] }, { "index": 141, "bpaa": "GC-his", "z_directions": "+", "nt1": "///a/1214", "nt2": "///a/979", "aa": "///s/52", "trs_dist": -11.412, "rot_dist": 4.434, "six_params": [ -7.957, 6.955, -4.305, -2.274, -0.848, 3.711 ], "C_alpha": [ -8.136, 6.602, -4.501 ] }, { "index": 142, "bpaa": "GC-gly", "z_directions": "-", "nt1": "///a/1214", "nt2": "///a/979", "aa": "///s/54", "trs_dist": -7.096, "rot_dist": 82.467, "six_params": [ -3.770, 5.640, -2.082, -33.558, 48.707, 60.307 ], "C_alpha": [ -6.529, 2.045, -1.840 ] }, { "index": 143, "bpaa": "AU-lys", "z_directions": "+", "nt1": "///a/1223", "nt2": "///a/946", "aa": "///m/103", "trs_dist": -9.032, "rot_dist": -123.112, "six_params": [ 4.722, 6.928, -3.359, 12.043, -22.836, -121.497 ], "C_alpha": [ 8.819, -1.036, -1.619 ] }, { "index": 144, "bpaa": "AU-thr", "z_directions": "+", "nt1": "///a/1223", "nt2": "///a/946", "aa": "///m/104", "trs_dist": 7.796, "rot_dist": -163.687, "six_params": [ -0.454, 7.085, 3.219, -30.859, 25.268, -162.639 ], "C_alpha": [ 7.591, 1.133, 1.255 ] }, { "index": 145, "bpaa": "GU-arg", "z_directions": "+", "nt1": "///a/1225", "nt2": "///a/944", "aa": "///m/101", "trs_dist": -11.919, "rot_dist": 173.268, "six_params": [ -5.126, -9.006, -5.889, 41.077, 56.543, 171.785 ], "C_alpha": [ 6.291, -8.494, -5.482 ] }, { "index": 146, "bpaa": "GU-asn", "z_directions": "-", "nt1": "///a/1225", "nt2": "///a/944", "aa": "///m/105", "trs_dist": -8.665, "rot_dist": 84.158, "six_params": [ 6.546, -3.547, -4.433, -67.816, 5.311, 52.880 ], "C_alpha": [ 8.171, -2.087, -2.009 ] }, { "index": 147, "bpaa": "GC-asn", "z_directions": "-", "nt1": "///a/1227", "nt2": "///a/942", "aa": "///m/105", "trs_dist": -9.239, "rot_dist": -85.462, "six_params": [ 6.440, -2.528, -6.123, -68.285, 28.111, -46.492 ], "C_alpha": [ 2.274, -7.464, -4.989 ] }, { "index": 148, "bpaa": "AA-val", "z_directions": "-", "nt1": "///a/1242", "nt2": "///a/1283", "aa": "///i/72", "trs_dist": 6.681, "rot_dist": 152.068, "six_params": [ 4.243, 4.999, -1.281, 65.348, 34.104, 144.889 ], "C_alpha": [ -3.756, 5.502, 0.448 ] }, { "index": 149, "bpaa": "AC-val", "z_directions": "+", "nt1": "///a/1282", "nt2": "///a/1243", "aa": "///i/72", "trs_dist": 7.756, "rot_dist": 93.147, "six_params": [ -2.137, -6.476, 3.695, -21.511, -71.179, 60.739 ], "C_alpha": [ -0.707, -7.178, 2.848 ] }, { "index": 150, "bpaa": "GU-glu", "z_directions": "-", "nt1": "///a/1291", "nt2": "///a/1292", "aa": "///g/113", "trs_dist": 8.470, "rot_dist": 122.394, "six_params": [ -4.240, 4.263, 5.966, -29.313, -0.463, 120.264 ], "C_alpha": [ -7.005, -0.900, 4.680 ] }, { "index": 151, "bpaa": "GU-lys", "z_directions": "+", "nt1": "///a/1291", "nt2": "///a/1292", "aa": "///g/114", "trs_dist": 4.781, "rot_dist": 79.620, "six_params": [ -3.532, 2.821, 1.556, 56.379, 10.039, 57.861 ], "C_alpha": [ -3.719, -0.123, 2.982 ] }, { "index": 152, "bpaa": "GU-ser", "z_directions": "+", "nt1": "///a/1291", "nt2": "///a/1292", "aa": "///g/115", "trs_dist": 3.427, "rot_dist": 60.051, "six_params": [ -0.622, -1.819, 2.837, 34.376, -46.721, 16.265 ], "C_alpha": [ -1.199, -2.716, 1.732 ] }, { "index": 153, "bpaa": "GU-arg", "z_directions": "-", "nt1": "///a/1291", "nt2": "///a/1292", "aa": "///g/119", "trs_dist": 10.508, "rot_dist": -86.138, "six_params": [ -1.320, -10.422, 0.277, -50.909, -38.773, -61.053 ], "C_alpha": [ -6.584, -7.027, 4.201 ] }, { "index": 154, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///a/1303", "nt2": "///a/1322", "aa": "///m/98", "trs_dist": 12.762, "rot_dist": 109.924, "six_params": [ 11.203, 3.653, -4.901, -34.579, -74.378, 80.921 ], "C_alpha": [ 7.219, 10.352, 1.952 ] }, { "index": 155, "bpaa": "GC-pro", "z_directions": "+", "nt1": "///a/1306", "nt2": "///a/1319", "aa": "///s/2", "trs_dist": 6.089, "rot_dist": -88.691, "six_params": [ 1.057, -0.194, 5.994, -85.967, 14.200, -18.519 ], "C_alpha": [ 2.313, 3.554, 4.395 ] }, { "index": 156, "bpaa": "GC-pro", "z_directions": "-", "nt1": "///a/1317", "nt2": "///a/1308", "aa": "///s/2", "trs_dist": -5.398, "rot_dist": -114.177, "six_params": [ 3.234, 3.289, -2.804, 46.734, -41.652, -101.027 ], "C_alpha": [ 5.354, -0.447, -0.036 ] }, { "index": 157, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///a/1317", "nt2": "///a/1308", "aa": "///s/3", "trs_dist": -6.980, "rot_dist": 71.341, "six_params": [ 5.782, -3.910, 0.034, 40.395, 49.399, 33.739 ], "C_alpha": [ 5.735, -1.659, -3.650 ] }, { "index": 158, "bpaa": "AU-pro", "z_directions": "-", "nt1": "///a/1318", "nt2": "///a/1307", "aa": "///s/2", "trs_dist": -5.875, "rot_dist": -141.003, "six_params": [ 2.113, 1.978, -5.113, 27.051, -80.955, -125.997 ], "C_alpha": [ 4.671, -2.936, -2.011 ] }, { "index": 159, "bpaa": "AU-ser", "z_directions": "-", "nt1": "///a/1318", "nt2": "///a/1307", "aa": "///s/4", "trs_dist": -8.771, "rot_dist": -44.634, "six_params": [ 3.120, -6.598, -4.864, -43.003, 11.880, -1.371 ], "C_alpha": [ 2.637, -8.010, -2.405 ] }, { "index": 160, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///a/1323", "nt2": "///a/1302", "aa": "///m/98", "trs_dist": -11.832, "rot_dist": 104.271, "six_params": [ -4.210, -10.994, 1.186, 68.060, 16.730, 82.871 ], "C_alpha": [ 3.238, -10.426, -4.575 ] }, { "index": 161, "bpaa": "AU-gln", "z_directions": "-", "nt1": "///a/1334", "nt2": "///a/937", "aa": "///i/126", "trs_dist": 11.703, "rot_dist": -166.820, "six_params": [ 6.577, -9.370, 2.428, -55.676, 2.394, -165.082 ], "C_alpha": [ -6.252, -7.543, 6.391 ] }, { "index": 162, "bpaa": "AG-lys", "z_directions": "+", "nt1": "///a/1343", "nt2": "///a/1367", "aa": "///i/13", "trs_dist": -13.448, "rot_dist": -148.655, "six_params": [ 4.189, 12.196, 3.815, -28.519, 46.750, -144.578 ], "C_alpha": [ 13.371, -0.715, -1.166 ] }, { "index": 163, "bpaa": "AU-ser", "z_directions": "+", "nt1": "///a/1344", "nt2": "///a/1366", "aa": "///g/33", "trs_dist": -6.478, "rot_dist": 106.174, "six_params": [ -3.363, 5.535, -0.149, 35.280, -67.733, 80.346 ], "C_alpha": [ -6.084, 2.223, -0.372 ] }, { "index": 164, "bpaa": "AU-gly", "z_directions": "+", "nt1": "///a/1344", "nt2": "///a/1366", "aa": "///g/34", "trs_dist": -6.016, "rot_dist": -28.768, "six_params": [ -5.758, -1.722, -0.266, 14.394, -24.290, -5.570 ], "C_alpha": [ -5.650, -1.318, -1.664 ] }, { "index": 165, "bpaa": "AU-lys", "z_directions": "+", "nt1": "///a/1344", "nt2": "///a/1366", "aa": "///i/13", "trs_dist": -13.595, "rot_dist": 166.012, "six_params": [ -10.296, -8.823, 0.992, -4.757, -55.763, 164.149 ], "C_alpha": [ 7.445, -10.785, -3.576 ] }, { "index": 166, "bpaa": "AU-lys", "z_directions": "-", "nt1": "///a/1344", "nt2": "///a/1366", "aa": "///i/120", "trs_dist": 11.238, "rot_dist": 36.883, "six_params": [ 8.754, 6.940, -1.223, 20.620, -30.112, 5.427 ], "C_alpha": [ 8.257, 7.227, 2.322 ] }, { "index": 167, "bpaa": "GC-lys", "z_directions": "+", "nt1": "///a/1349", "nt2": "///a/1361", "aa": "///i/114", "trs_dist": -10.834, "rot_dist": 74.044, "six_params": [ -6.764, -5.785, -6.178, -4.011, -63.386, 40.241 ], "C_alpha": [ -0.320, -6.560, -8.610 ] }, { "index": 168, "bpaa": "AU-lys", "z_directions": "-", "nt1": "///a/1362", "nt2": "///a/1348", "aa": "///i/114", "trs_dist": 10.033, "rot_dist": 121.001, "six_params": [ 8.540, 4.961, 1.766, 51.754, -8.873, 113.395 ], "C_alpha": [ 1.596, 8.876, 4.384 ] }, { "index": 169, "bpaa": "GU-ser", "z_directions": "-", "nt1": "///a/1365", "nt2": "///a/1345", "aa": "///g/33", "trs_dist": 8.176, "rot_dist": 143.442, "six_params": [ -6.354, 2.610, 4.435, 88.068, 1.622, 128.261 ], "C_alpha": [ -1.642, -6.199, 5.081 ] }, { "index": 170, "bpaa": "GU-lys", "z_directions": "+", "nt1": "///a/1365", "nt2": "///a/1345", "aa": "///i/120", "trs_dist": -11.322, "rot_dist": -150.499, "six_params": [ 4.342, 10.068, 2.823, -53.548, 6.661, -146.798 ], "C_alpha": [ 11.003, -1.263, -2.249 ] }, { "index": 171, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///a/1373", "nt2": "///a/930", "aa": "///g/3", "trs_dist": 6.941, "rot_dist": 149.330, "six_params": [ -0.593, -4.655, 5.114, -42.082, 64.546, 140.484 ], "C_alpha": [ 3.291, 1.609, 5.881 ] }, { "index": 172, "bpaa": "AU-thr", "z_directions": "-", "nt1": "///a/1390", "nt2": "///a/915", "aa": "///e/25", "trs_dist": -6.817, "rot_dist": -146.905, "six_params": [ -0.760, -6.764, 0.383, 24.567, -58.175, -140.939 ], "C_alpha": [ -6.433, -1.742, -1.419 ] }, { "index": 173, "bpaa": "AU-lys", "z_directions": "-", "nt1": "///a/1501", "nt2": "///a/1522", "aa": "///u/46", "trs_dist": -10.448, "rot_dist": -82.278, "six_params": [ 7.649, -3.268, -6.322, 44.165, -16.573, -69.476 ], "C_alpha": [ 6.534, -5.579, -5.940 ] }, { "index": 174, "bpaa": "GC-thr", "z_directions": "-", "nt1": "///a/1502", "nt2": "///a/1521", "aa": "///u/42", "trs_dist": -9.483, "rot_dist": -85.959, "six_params": [ 9.003, -2.872, 0.795, 64.791, 9.794, -59.082 ], "C_alpha": [ 6.497, -6.721, -1.591 ] }, { "index": 175, "bpaa": "GC-thr", "z_directions": "+", "nt1": "///a/1520", "nt2": "///a/1503", "aa": "///u/42", "trs_dist": 9.726, "rot_dist": -98.631, "six_params": [ -6.740, 6.748, 1.905, -10.077, 57.436, -83.428 ], "C_alpha": [ 0.833, 8.668, 4.323 ] }, { "index": 176, "bpaa": "AU-ala", "z_directions": "+", "nt1": "///A/5", "nt2": "///A/2885", "aa": "///J/134", "trs_dist": -7.309, "rot_dist": 38.797, "six_params": [ -7.258, 0.226, 0.833, 19.244, -15.102, 30.347 ], "C_alpha": [ -7.091, -1.756, -0.096 ] }, { "index": 177, "bpaa": "AU-gln", "z_directions": "-", "nt1": "///A/6", "nt2": "///A/2884", "aa": "///J/135", "trs_dist": -8.939, "rot_dist": -86.968, "six_params": [ -5.608, -1.947, -6.683, 15.355, 73.684, -47.248 ], "C_alpha": [ -8.383, 2.220, -2.185 ] }, { "index": 178, "bpaa": "GC-asn", "z_directions": "+", "nt1": "///A/23", "nt2": "///A/508", "aa": "///S/77", "trs_dist": 8.455, "rot_dist": 76.516, "six_params": [ -6.999, 2.636, 3.944, -10.446, -43.587, 63.712 ], "C_alpha": [ -8.225, -1.743, 0.815 ] }, { "index": 179, "bpaa": "GC-glu", "z_directions": "+", "nt1": "///A/24", "nt2": "///A/507", "aa": "///S/78", "trs_dist": -9.070, "rot_dist": -92.205, "six_params": [ -7.827, -2.283, -3.975, -34.365, 24.862, -83.899 ], "C_alpha": [ -8.322, 3.314, -1.378 ] }, { "index": 180, "bpaa": "AG-arg", "z_directions": "+", "nt1": "///A/28", "nt2": "///A/503", "aa": "///Q/11", "trs_dist": 15.100, "rot_dist": 56.488, "six_params": [ -14.637, -2.043, 3.100, 55.104, -11.401, 5.160 ], "C_alpha": [ -14.664, -3.571, 0.395 ] }, { "index": 181, "bpaa": "AU-gln", "z_directions": "-", "nt1": "///A/38", "nt2": "///A/432", "aa": "///E/40", "trs_dist": -10.824, "rot_dist": 172.912, "six_params": [ -2.734, 10.166, 2.518, -30.013, -20.849, 172.535 ], "C_alpha": [ -10.553, -2.222, -0.709 ] }, { "index": 182, "bpaa": "AU-ser", "z_directions": "-", "nt1": "///A/38", "nt2": "///A/432", "aa": "///E/42", "trs_dist": -8.319, "rot_dist": 143.852, "six_params": [ 0.338, 8.290, -0.612, -23.492, 7.605, 142.965 ], "C_alpha": [ -7.474, 2.759, -2.291 ] }, { "index": 183, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/85", "nt2": "///A/98", "aa": "///U/6", "trs_dist": -13.110, "rot_dist": 95.912, "six_params": [ 10.401, 6.477, -4.662, -12.839, -5.835, 95.122 ], "C_alpha": [ 2.797, 11.865, -4.823 ] }, { "index": 184, "bpaa": "GC-lys", "z_directions": "+", "nt1": "///A/85", "nt2": "///A/98", "aa": "///U/26", "trs_dist": 12.224, "rot_dist": -84.537, "six_params": [ -0.633, 10.700, 5.876, -44.331, -35.812, -65.297 ], "C_alpha": [ 5.049, 11.078, 1.007 ] }, { "index": 185, "bpaa": "GC-thr", "z_directions": "-", "nt1": "///A/110", "nt2": "///A/76", "aa": "///Y/55", "trs_dist": 9.238, "rot_dist": 176.463, "six_params": [ -3.999, 8.049, -2.139, 44.900, 13.164, 176.146 ], "C_alpha": [ -8.293, -3.757, 1.541 ] }, { "index": 186, "bpaa": "GA-arg", "z_directions": "+", "nt1": "///A/117", "nt2": "///A/53", "aa": "///4/35", "trs_dist": -12.946, "rot_dist": 59.274, "six_params": [ -12.623, 2.321, -1.693, 31.002, -50.407, 3.551 ], "C_alpha": [ -10.953, 3.072, -6.175 ] }, { "index": 187, "bpaa": "AG-ser", "z_directions": "-", "nt1": "///A/251", "nt2": "///A/247", "aa": "///5/8", "trs_dist": 7.723, "rot_dist": 82.410, "six_params": [ 6.991, 1.244, 3.036, 15.349, 4.173, 81.131 ], "C_alpha": [ 4.842, 5.256, 2.911 ] }, { "index": 188, "bpaa": "AG-lys", "z_directions": "-", "nt1": "///A/251", "nt2": "///A/247", "aa": "///5/12", "trs_dist": -12.858, "rot_dist": 88.348, "six_params": [ 12.843, -0.604, 0.179, 46.488, 0.462, 77.371 ], "C_alpha": [ 10.410, 7.549, -0.118 ] }, { "index": 189, "bpaa": "GU-ser", "z_directions": "-", "nt1": "///A/252", "nt2": "///A/246", "aa": "///5/8", "trs_dist": -6.131, "rot_dist": 40.540, "six_params": [ 5.992, 1.277, -0.245, 5.398, -1.007, 40.182 ], "C_alpha": [ 5.184, 3.265, -0.140 ] }, { "index": 190, "bpaa": "GU-lys", "z_directions": "-", "nt1": "///A/252", "nt2": "///A/246", "aa": "///5/12", "trs_dist": -11.345, "rot_dist": 52.241, "six_params": [ 10.350, -3.553, -2.995, 33.317, -15.520, 37.787 ], "C_alpha": [ 11.038, 0.874, -2.474 ] }, { "index": 191, "bpaa": "GA-lys", "z_directions": "-", "nt1": "///A/254", "nt2": "///A/244", "aa": "///5/5", "trs_dist": 10.346, "rot_dist": -82.874, "six_params": [ 9.170, 3.552, -3.217, 7.283, -40.189, -73.748 ], "C_alpha": [ 9.924, -2.881, 0.360 ] }, { "index": 192, "bpaa": "GG-gly", "z_directions": "+", "nt1": "///A/302", "nt2": "///A/323", "aa": "///U/15", "trs_dist": 8.787, "rot_dist": 106.189, "six_params": [ 1.711, 7.472, 4.296, 32.519, 72.209, 77.606 ], "C_alpha": [ -0.349, 7.666, 4.286 ] }, { "index": 193, "bpaa": "GG-lys", "z_directions": "+", "nt1": "///A/302", "nt2": "///A/323", "aa": "///U/16", "trs_dist": 8.115, "rot_dist": 106.527, "six_params": [ 4.050, 1.459, 6.879, -59.497, 59.593, 72.548 ], "C_alpha": [ 2.955, 7.133, 2.487 ] }, { "index": 194, "bpaa": "GC-asn", "z_directions": "-", "nt1": "///A/317", "nt2": "///A/313", "aa": "///E/162", "trs_dist": -7.638, "rot_dist": 109.219, "six_params": [ -0.989, 7.284, -2.075, -68.816, -36.068, 83.919 ], "C_alpha": [ -2.954, 3.771, -5.954 ] }, { "index": 195, "bpaa": "GC-ser", "z_directions": "+", "nt1": "///A/320", "nt2": "///A/330", "aa": "///U/67", "trs_dist": 9.618, "rot_dist": 76.047, "six_params": [ -7.336, -4.332, 4.464, 8.824, -1.123, 75.603 ], "C_alpha": [ -2.980, -8.207, 4.049 ] }, { "index": 196, "bpaa": "GC-ser", "z_directions": "+", "nt1": "///A/321", "nt2": "///A/329", "aa": "///U/67", "trs_dist": -7.398, "rot_dist": 48.511, "six_params": [ -7.383, -0.161, 0.443, -10.655, -12.753, 45.738 ], "C_alpha": [ -6.754, -3.015, -0.364 ] }, { "index": 197, "bpaa": "GU-lys", "z_directions": "-", "nt1": "///A/366", "nt2": "///A/390", "aa": "///X/54", "trs_dist": -12.124, "rot_dist": -133.069, "six_params": [ 9.858, 2.781, -6.487, 69.164, -32.616, -119.080 ], "C_alpha": [ 9.960, -6.849, -0.935 ] }, { "index": 198, "bpaa": "GU-phe", "z_directions": "-", "nt1": "///A/370", "nt2": "///A/386", "aa": "///X/29", "trs_dist": -10.863, "rot_dist": 163.007, "six_params": [ -0.622, 10.433, -2.964, -0.417, 87.257, 156.444 ], "C_alpha": [ -10.689, -0.320, -1.754 ] }, { "index": 199, "bpaa": "GA-lys", "z_directions": "+", "nt1": "///A/391", "nt2": "///A/365", "aa": "///X/54", "trs_dist": -13.126, "rot_dist": -134.510, "six_params": [ 9.226, 8.517, 3.823, 2.601, 72.853, -122.543 ], "C_alpha": [ 12.138, -4.473, -2.223 ] }, { "index": 200, "bpaa": "GA-arg", "z_directions": "+", "nt1": "///A/391", "nt2": "///A/365", "aa": "///X/57", "trs_dist": 12.915, "rot_dist": -167.264, "six_params": [ 2.981, 12.550, -0.635, 42.407, 64.656, -163.668 ], "C_alpha": [ 12.604, -1.683, 2.247 ] }, { "index": 201, "bpaa": "GC-gln", "z_directions": "+", "nt1": "///A/433", "nt2": "///A/37", "aa": "///E/40", "trs_dist": -11.543, "rot_dist": -30.551, "six_params": [ -8.143, 4.568, -6.788, 25.045, 13.651, -11.058 ], "C_alpha": [ -8.205, 6.644, -4.633 ] }, { "index": 202, "bpaa": "GC-ser", "z_directions": "+", "nt1": "///A/433", "nt2": "///A/37", "aa": "///E/42", "trs_dist": -8.046, "rot_dist": 20.667, "six_params": [ -7.019, 2.094, -3.329, -6.810, 12.843, 14.731 ], "C_alpha": [ -7.510, 0.954, -2.651 ] }, { "index": 203, "bpaa": "AG-lys", "z_directions": "+", "nt1": "///A/451", "nt2": "///A/460", "aa": "///4/37", "trs_dist": -12.432, "rot_dist": -112.273, "six_params": [ 3.428, 11.189, -4.195, -4.290, -72.298, -92.641 ], "C_alpha": [ 11.711, 3.759, -1.748 ] }, { "index": 204, "bpaa": "AG-arg", "z_directions": "+", "nt1": "///A/451", "nt2": "///A/460", "aa": "///4/39", "trs_dist": 10.192, "rot_dist": -112.424, "six_params": [ 0.349, 8.291, 5.916, -61.312, -23.321, -97.157 ], "C_alpha": [ 7.383, 6.982, 0.852 ] }, { "index": 205, "bpaa": "GA-val", "z_directions": "+", "nt1": "///A/454", "nt2": "///A/457", "aa": "///4/44", "trs_dist": 9.930, "rot_dist": 125.607, "six_params": [ -3.218, -9.252, 1.627, -48.988, -15.942, 119.010 ], "C_alpha": [ 4.898, -7.127, 4.837 ] }, { "index": 206, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/458", "nt2": "///A/453", "aa": "///4/34", "trs_dist": 11.691, "rot_dist": 94.924, "six_params": [ 7.854, 7.863, -3.628, -10.845, -88.854, 35.617 ], "C_alpha": [ 5.641, 9.989, 2.241 ] }, { "index": 207, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/458", "nt2": "///A/453", "aa": "///4/39", "trs_dist": 10.777, "rot_dist": 58.670, "six_params": [ 9.656, 4.769, -0.393, 25.501, -52.356, 7.459 ], "C_alpha": [ 8.306, 4.816, 4.888 ] }, { "index": 208, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/459", "nt2": "///A/452", "aa": "///4/39", "trs_dist": 10.401, "rot_dist": -68.641, "six_params": [ 8.848, 4.432, -3.201, 13.560, -65.515, -16.327 ], "C_alpha": [ 9.570, 3.150, 2.591 ] }, { "index": 209, "bpaa": "AG-leu", "z_directions": "+", "nt1": "///A/483", "nt2": "///A/479", "aa": "///S/7", "trs_dist": 10.201, "rot_dist": -144.844, "six_params": [ 0.986, -3.599, 9.494, 76.310, -12.518, -134.491 ], "C_alpha": [ -7.976, -3.517, 5.258 ] }, { "index": 210, "bpaa": "AG-lys", "z_directions": "+", "nt1": "///A/483", "nt2": "///A/479", "aa": "///S/49", "trs_dist": -9.795, "rot_dist": 126.447, "six_params": [ -9.697, -1.035, -0.915, -34.383, -2.193, 123.714 ], "C_alpha": [ -3.433, -9.135, -0.746 ] }, { "index": 211, "bpaa": "GC-ser", "z_directions": "+", "nt1": "///A/484", "nt2": "///A/478", "aa": "///S/53", "trs_dist": 8.421, "rot_dist": 88.145, "six_params": [ -7.902, 0.956, 2.752, -46.049, -16.220, 75.817 ], "C_alpha": [ -7.516, -3.654, 1.044 ] }, { "index": 212, "bpaa": "GC-asn", "z_directions": "+", "nt1": "///A/485", "nt2": "///A/477", "aa": "///S/57", "trs_dist": 9.071, "rot_dist": 103.436, "six_params": [ -6.259, 1.996, 6.255, -55.905, -55.827, 73.179 ], "C_alpha": [ -8.834, -1.734, 1.111 ] }, { "index": 213, "bpaa": "GC-asn", "z_directions": "-", "nt1": "///A/486", "nt2": "///A/476", "aa": "///S/61", "trs_dist": 9.646, "rot_dist": -143.460, "six_params": [ -4.060, -7.034, -5.204, -28.665, 75.211, -131.500 ], "C_alpha": [ -9.410, 2.140, 0.089 ] }, { "index": 214, "bpaa": "GG-his", "z_directions": "-", "nt1": "///A/489", "nt2": "///A/497", "aa": "///U/44", "trs_dist": -9.414, "rot_dist": 156.644, "six_params": [ 6.490, 6.771, -0.818, 28.905, 73.405, 149.609 ], "C_alpha": [ -5.604, 6.983, -2.898 ] }, { "index": 215, "bpaa": "GC-tyr", "z_directions": "+", "nt1": "///A/524", "nt2": "///A/550", "aa": "///Q/45", "trs_dist": 8.947, "rot_dist": 42.593, "six_params": [ -8.104, 2.856, 2.494, -31.386, 2.691, 29.040 ], "C_alpha": [ -8.655, 1.322, 1.812 ] }, { "index": 216, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///A/524", "nt2": "///A/550", "aa": "///Q/48", "trs_dist": 11.944, "rot_dist": 64.708, "six_params": [ -11.239, -2.469, -3.201, -12.292, 63.222, 6.612 ], "C_alpha": [ -11.013, -3.104, 3.418 ] }, { "index": 217, "bpaa": "GU-gln", "z_directions": "+", "nt1": "///A/526", "nt2": "///A/548", "aa": "///Q/56", "trs_dist": -11.759, "rot_dist": 29.902, "six_params": [ -11.544, 2.023, -0.954, -27.268, -11.313, 4.807 ], "C_alpha": [ -11.432, 1.140, -2.523 ] }, { "index": 218, "bpaa": "GC-his", "z_directions": "+", "nt1": "///A/527", "nt2": "///A/547", "aa": "///J/47", "trs_dist": -7.796, "rot_dist": 45.465, "six_params": [ -7.788, -0.090, 0.329, 7.414, -25.787, 37.047 ], "C_alpha": [ -7.259, -2.484, -1.404 ] }, { "index": 219, "bpaa": "GA-val", "z_directions": "-", "nt1": "///A/528", "nt2": "///A/546", "aa": "///J/48", "trs_dist": -10.017, "rot_dist": -118.793, "six_params": [ -6.349, -3.540, -6.891, 49.485, 65.405, -95.149 ], "C_alpha": [ -7.234, 6.093, -3.263 ] }, { "index": 220, "bpaa": "GU-asp", "z_directions": "-", "nt1": "///A/549", "nt2": "///A/525", "aa": "///Q/49", "trs_dist": -8.907, "rot_dist": -179.242, "six_params": [ 3.250, -7.577, -3.371, 1.004, -47.323, -179.172 ], "C_alpha": [ -7.523, -4.411, -1.855 ] }, { "index": 221, "bpaa": "GU-gln", "z_directions": "-", "nt1": "///A/549", "nt2": "///A/525", "aa": "///Q/52", "trs_dist": -10.604, "rot_dist": 177.719, "six_params": [ -0.877, 10.449, 1.576, -49.789, 18.088, 177.451 ], "C_alpha": [ -10.186, -0.763, -2.838 ] }, { "index": 222, "bpaa": "GU-gln", "z_directions": "-", "nt1": "///A/549", "nt2": "///A/525", "aa": "///Q/56", "trs_dist": -11.613, "rot_dist": 150.045, "six_params": [ 2.793, 10.198, -4.802, -11.964, 19.114, 149.441 ], "C_alpha": [ -8.792, 4.329, -6.236 ] }, { "index": 223, "bpaa": "AU-arg", "z_directions": "-", "nt1": "///A/565", "nt2": "///A/556", "aa": "///R/80", "trs_dist": -9.306, "rot_dist": -87.353, "six_params": [ 8.653, -1.611, -3.022, -4.344, -21.770, -85.041 ], "C_alpha": [ 5.537, -7.378, -1.287 ] }, { "index": 224, "bpaa": "GC-gln", "z_directions": "+", "nt1": "///A/567", "nt2": "///A/554", "aa": "///Q/37", "trs_dist": 11.935, "rot_dist": 60.941, "six_params": [ -8.458, -6.312, 5.574, 31.426, 5.207, 52.648 ], "C_alpha": [ -3.996, -10.494, 4.030 ] }, { "index": 225, "bpaa": "GA-gln", "z_directions": "+", "nt1": "///A/568", "nt2": "///A/553", "aa": "///Q/37", "trs_dist": -10.393, "rot_dist": 37.763, "six_params": [ -9.619, -3.625, 1.536, 23.656, -13.624, 26.344 ], "C_alpha": [ -8.576, -5.851, -0.382 ] }, { "index": 226, "bpaa": "AC-arg", "z_directions": "-", "nt1": "///A/576", "nt2": "///A/1238", "aa": "///Q/6", "trs_dist": -14.958, "rot_dist": -43.128, "six_params": [ 14.605, -2.905, 1.408, -29.556, 30.749, -6.552 ], "C_alpha": [ 14.351, -3.791, -1.791 ] }, { "index": 227, "bpaa": "CU-pro", "z_directions": "-", "nt1": "///A/577", "nt2": "///A/800", "aa": "///L/19", "trs_dist": 7.963, "rot_dist": 87.655, "six_params": [ 0.862, 6.437, 4.607, 19.468, -15.708, 84.714 ], "C_alpha": [ -3.588, 4.222, 5.712 ] }, { "index": 228, "bpaa": "CU-lys", "z_directions": "+", "nt1": "///A/577", "nt2": "///A/800", "aa": "///L/29", "trs_dist": 7.012, "rot_dist": 74.996, "six_params": [ 4.802, 5.072, 0.619, 72.838, -11.679, 14.590 ], "C_alpha": [ 4.073, 4.100, 3.968 ] }, { "index": 229, "bpaa": "CU-thr", "z_directions": "+", "nt1": "///A/577", "nt2": "///A/800", "aa": "///L/30", "trs_dist": 4.278, "rot_dist": -67.180, "six_params": [ 2.872, 2.422, 2.047, 29.154, -36.782, -49.503 ], "C_alpha": [ 2.524, 0.729, 3.387 ] }, { "index": 230, "bpaa": "CU-arg", "z_directions": "-", "nt1": "///A/577", "nt2": "///A/800", "aa": "///L/33", "trs_dist": 5.783, "rot_dist": -90.333, "six_params": [ 3.240, -3.979, 2.666, 24.908, -84.943, -20.230 ], "C_alpha": [ 0.087, -4.743, 3.303 ] }, { "index": 231, "bpaa": "AU-lys", "z_directions": "+", "nt1": "///A/580", "nt2": "///A/657", "aa": "///5/3", "trs_dist": 9.210, "rot_dist": 77.938, "six_params": [ -9.098, -0.120, 1.428, 30.273, 64.373, 34.189 ], "C_alpha": [ -6.320, -3.114, 5.917 ] }, { "index": 232, "bpaa": "AU-met", "z_directions": "+", "nt1": "///A/582", "nt2": "///A/655", "aa": "///5/4", "trs_dist": -8.856, "rot_dist": -77.041, "six_params": [ -8.388, 1.465, 2.433, -17.396, -65.558, -38.957 ], "C_alpha": [ -7.345, 4.109, -2.702 ] }, { "index": 233, "bpaa": "AU-arg", "z_directions": "-", "nt1": "///A/582", "nt2": "///A/655", "aa": "///5/64", "trs_dist": 8.427, "rot_dist": 85.589, "six_params": [ -6.080, 2.205, 5.404, 6.558, -28.201, 81.449 ], "C_alpha": [ -6.747, -3.253, 3.875 ] }, { "index": 234, "bpaa": "AU-ala", "z_directions": "-", "nt1": "///A/586", "nt2": "///A/651", "aa": "///L/12", "trs_dist": 8.280, "rot_dist": 109.910, "six_params": [ -8.069, 1.052, 1.531, -22.422, 61.505, 93.903 ], "C_alpha": [ -5.509, -3.367, 5.194 ] }, { "index": 235, "bpaa": "GC-ala", "z_directions": "-", "nt1": "///A/587", "nt2": "///A/650", "aa": "///L/12", "trs_dist": 7.398, "rot_dist": 79.099, "six_params": [ -5.269, 4.881, -1.773, -6.361, 54.816, 59.078 ], "C_alpha": [ -7.232, 1.475, 0.593 ] }, { "index": 236, "bpaa": "GC-asn", "z_directions": "+", "nt1": "///A/589", "nt2": "///A/648", "aa": "///E/96", "trs_dist": -10.182, "rot_dist": -64.369, "six_params": [ -9.406, -3.780, 0.947, -51.921, -37.384, -7.478 ], "C_alpha": [ -9.693, -3.045, -0.487 ] }, { "index": 237, "bpaa": "GC-met", "z_directions": "-", "nt1": "///A/589", "nt2": "///A/648", "aa": "///E/99", "trs_dist": 10.072, "rot_dist": 172.630, "six_params": [ 0.559, 9.752, -2.454, 48.870, 16.205, 171.817 ], "C_alpha": [ -9.850, 1.214, 1.732 ] }, { "index": 238, "bpaa": "AG-lys", "z_directions": "-", "nt1": "///A/599", "nt2": "///A/609", "aa": "///E/97", "trs_dist": 13.124, "rot_dist": 68.011, "six_params": [ 12.593, -1.954, -3.139, -36.108, -24.064, 53.702 ], "C_alpha": [ 12.595, 3.670, 0.262 ] }, { "index": 239, "bpaa": "GA-gln", "z_directions": "+", "nt1": "///A/602", "nt2": "///A/606", "aa": "///E/172", "trs_dist": 9.839, "rot_dist": 69.869, "six_params": [ -9.155, 3.589, 0.332, -3.429, 27.379, 64.835 ], "C_alpha": [ -9.397, -1.659, 2.393 ] }, { "index": 240, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///A/618", "nt2": "///A/625", "aa": "///L/74", "trs_dist": -11.362, "rot_dist": -153.080, "six_params": [ 3.271, 10.774, -1.526, -25.718, -86.045, -141.629 ], "C_alpha": [ 11.294, -0.622, -1.048 ] }, { "index": 241, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/624", "nt2": "///A/619", "aa": "///L/74", "trs_dist": 11.644, "rot_dist": 88.930, "six_params": [ 10.732, 4.153, 1.776, -77.286, -43.668, 6.001 ], "C_alpha": [ 9.570, 6.166, 2.435 ] }, { "index": 242, "bpaa": "GU-gln", "z_directions": "-", "nt1": "///A/649", "nt2": "///A/588", "aa": "///E/29", "trs_dist": 11.031, "rot_dist": -176.107, "six_params": [ 0.671, -10.916, -1.433, -19.724, 36.096, -175.842 ], "C_alpha": [ -10.988, -0.883, 0.287 ] }, { "index": 243, "bpaa": "GU-met", "z_directions": "+", "nt1": "///A/649", "nt2": "///A/588", "aa": "///E/99", "trs_dist": -11.777, "rot_dist": -63.680, "six_params": [ -10.789, 4.596, -1.083, -18.747, -58.614, -17.243 ], "C_alpha": [ -8.013, 5.186, -6.903 ] }, { "index": 244, "bpaa": "GU-arg", "z_directions": "+", "nt1": "///A/654", "nt2": "///A/583", "aa": "///5/64", "trs_dist": -7.108, "rot_dist": 139.065, "six_params": [ -5.505, 4.126, -1.789, 29.205, 6.930, 137.551 ], "C_alpha": [ -6.127, -3.598, -0.358 ] }, { "index": 245, "bpaa": "AU-lys", "z_directions": "-", "nt1": "///A/656", "nt2": "///A/581", "aa": "///5/3", "trs_dist": -7.388, "rot_dist": 170.122, "six_params": [ -1.619, 6.836, 2.287, -41.388, -46.774, 168.443 ], "C_alpha": [ -7.214, -1.166, -1.020 ] }, { "index": 246, "bpaa": "AU-met", "z_directions": "-", "nt1": "///A/656", "nt2": "///A/581", "aa": "///5/4", "trs_dist": -8.083, "rot_dist": -179.204, "six_params": [ -2.350, -5.165, -5.756, -54.684, -2.552, -179.103 ], "C_alpha": [ -7.244, 2.210, -2.800 ] }, { "index": 247, "bpaa": "AU-phe", "z_directions": "+", "nt1": "///A/660", "nt2": "///A/578", "aa": "///E/84", "trs_dist": -8.199, "rot_dist": 111.366, "six_params": [ -6.461, 5.011, 0.611, -38.712, -76.885, 79.046 ], "C_alpha": [ -6.474, 0.160, -5.035 ] }, { "index": 248, "bpaa": "CU-arg", "z_directions": "-", "nt1": "///A/663", "nt2": "///A/797", "aa": "///E/68", "trs_dist": 9.658, "rot_dist": 134.951, "six_params": [ 2.473, 7.669, 5.323, -25.891, -43.722, 129.813 ], "C_alpha": [ -7.640, 4.296, 4.059 ] }, { "index": 249, "bpaa": "CU-arg", "z_directions": "+", "nt1": "///A/663", "nt2": "///A/797", "aa": "///L/41", "trs_dist": -9.893, "rot_dist": -147.225, "six_params": [ 4.683, 8.533, 1.768, -67.559, 0.389, -140.314 ], "C_alpha": [ 9.167, -1.663, -3.276 ] }, { "index": 250, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/664", "nt2": "///A/796", "aa": "///E/68", "trs_dist": -11.340, "rot_dist": 120.125, "six_params": [ 3.850, 10.551, 1.567, -49.153, -41.682, 107.698 ], "C_alpha": [ -6.233, 9.329, -1.624 ] }, { "index": 251, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///A/664", "nt2": "///A/796", "aa": "///L/41", "trs_dist": -9.612, "rot_dist": -169.595, "six_params": [ 4.777, 8.325, -0.518, -52.090, 9.027, -168.376 ], "C_alpha": [ 7.581, -3.820, -4.469 ] }, { "index": 252, "bpaa": "AG-thr", "z_directions": "+", "nt1": "///A/717", "nt2": "///A/694", "aa": "///C/9", "trs_dist": 10.617, "rot_dist": 84.387, "six_params": [ -10.387, -0.273, 2.179, -44.715, 1.581, 73.514 ], "C_alpha": [ -8.654, -5.705, 2.260 ] }, { "index": 253, "bpaa": "GU-thr", "z_directions": "+", "nt1": "///A/718", "nt2": "///A/693", "aa": "///C/9", "trs_dist": -10.075, "rot_dist": 48.409, "six_params": [ -9.058, 3.837, -2.175, -42.635, 6.826, 22.433 ], "C_alpha": [ -9.588, 1.040, -2.886 ] }, { "index": 254, "bpaa": "GU-ser", "z_directions": "-", "nt1": "///A/718", "nt2": "///A/693", "aa": "///C/10", "trs_dist": 10.785, "rot_dist": -134.561, "six_params": [ -6.094, -7.791, -4.299, -4.425, 72.812, -122.590 ], "C_alpha": [ -10.427, 2.683, 0.451 ] }, { "index": 255, "bpaa": "GC-ala", "z_directions": "-", "nt1": "///A/719", "nt2": "///A/1761", "aa": "///C/11", "trs_dist": 6.191, "rot_dist": 102.122, "six_params": [ -2.912, 3.035, 4.542, 25.151, -65.759, 79.443 ], "C_alpha": [ -5.318, -1.537, 2.765 ] }, { "index": 256, "bpaa": "GC-gly", "z_directions": "+", "nt1": "///A/719", "nt2": "///A/1761", "aa": "///C/12", "trs_dist": 4.984, "rot_dist": 111.294, "six_params": [ -0.691, 1.881, 4.563, -46.835, -1.602, 104.095 ], "C_alpha": [ -3.256, 1.583, 3.435 ] }, { "index": 257, "bpaa": "GC-lys", "z_directions": "-", "nt1": "///A/719", "nt2": "///A/1761", "aa": "///C/207", "trs_dist": 4.111, "rot_dist": -75.315, "six_params": [ 2.003, 3.589, 0.055, 70.204, -26.719, -5.904 ], "C_alpha": [ 1.821, 2.683, 2.517 ] }, { "index": 258, "bpaa": "GC-ala", "z_directions": "-", "nt1": "///A/719", "nt2": "///A/1761", "aa": "///C/208", "trs_dist": -5.235, "rot_dist": 121.893, "six_params": [ 4.978, -1.603, -0.221, 62.709, -12.526, 110.154 ], "C_alpha": [ 4.018, 3.313, -0.503 ] }, { "index": 259, "bpaa": "GC-gly", "z_directions": "+", "nt1": "///A/719", "nt2": "///A/1761", "aa": "///C/209", "trs_dist": -7.236, "rot_dist": 170.907, "six_params": [ 6.972, -1.772, -0.787, -15.843, 13.448, 170.755 ], "C_alpha": [ 2.475, 6.666, -1.315 ] }, { "index": 260, "bpaa": "GU-ala", "z_directions": "-", "nt1": "///A/738", "nt2": "///A/736", "aa": "///S/89", "trs_dist": -11.281, "rot_dist": 109.108, "six_params": [ -0.162, 11.236, 0.995, -23.921, -4.418, 107.224 ], "C_alpha": [ -9.110, 6.513, -1.364 ] }, { "index": 261, "bpaa": "GU-lys", "z_directions": "-", "nt1": "///A/738", "nt2": "///A/736", "aa": "///S/90", "trs_dist": -10.138, "rot_dist": 131.270, "six_params": [ 4.559, 7.188, -5.508, 42.095, -0.571, 127.531 ], "C_alpha": [ -5.775, 7.935, -2.560 ] }, { "index": 262, "bpaa": "AU-ala", "z_directions": "+", "nt1": "///A/754", "nt2": "///A/1762", "aa": "///C/208", "trs_dist": -4.633, "rot_dist": -70.603, "six_params": [ -2.831, 0.969, -3.537, -29.012, -63.078, -13.705 ], "C_alpha": [ -0.526, -0.028, -4.604 ] }, { "index": 263, "bpaa": "AU-arg", "z_directions": "-", "nt1": "///A/754", "nt2": "///A/1762", "aa": "///C/212", "trs_dist": -8.613, "rot_dist": -102.481, "six_params": [ -0.397, -7.430, -4.337, 8.058, 68.967, -80.779 ], "C_alpha": [ -6.860, -3.520, -3.842 ] }, { "index": 264, "bpaa": "AU-pro", "z_directions": "+", "nt1": "///A/754", "nt2": "///A/1762", "aa": "///C/218", "trs_dist": -8.124, "rot_dist": 82.670, "six_params": [ -5.366, -5.364, 2.906, 33.714, -26.004, 72.615 ], "C_alpha": [ -1.141, -8.076, -0.043 ] }, { "index": 265, "bpaa": "AU-arg", "z_directions": "-", "nt1": "///A/762", "nt2": "///A/680", "aa": "///C/43", "trs_dist": -11.444, "rot_dist": 174.117, "six_params": [ 1.663, 10.824, -3.323, 3.183, -45.989, 173.606 ], "C_alpha": [ -10.720, 3.372, -2.109 ] }, { "index": 266, "bpaa": "GA-asp", "z_directions": "+", "nt1": "///A/770", "nt2": "///A/773", "aa": "///C/229", "trs_dist": 8.510, "rot_dist": 146.619, "six_params": [ -3.363, -7.244, 2.937, 15.531, -15.141, 145.993 ], "C_alpha": [ 6.143, -5.703, 1.469 ] }, { "index": 267, "bpaa": "GC-ser", "z_directions": "-", "nt1": "///A/798", "nt2": "///A/662", "aa": "///L/42", "trs_dist": -8.607, "rot_dist": 32.205, "six_params": [ 5.465, -6.491, -1.447, 5.023, -28.846, 13.560 ], "C_alpha": [ 6.400, -5.742, -0.323 ] }, { "index": 268, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/799", "nt2": "///A/661", "aa": "///L/33", "trs_dist": 9.710, "rot_dist": 98.884, "six_params": [ 7.115, -1.767, 6.367, 74.145, -50.532, 46.911 ], "C_alpha": [ 6.244, -3.921, 6.315 ] }, { "index": 269, "bpaa": "GC-ser", "z_directions": "-", "nt1": "///A/799", "nt2": "///A/661", "aa": "///L/40", "trs_dist": 7.858, "rot_dist": -115.883, "six_params": [ 6.581, 3.771, 2.051, -3.370, 17.315, -115.022 ], "C_alpha": [ 6.879, -3.697, 0.926 ] }, { "index": 270, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/799", "nt2": "///A/661", "aa": "///L/41", "trs_dist": -6.756, "rot_dist": -130.660, "six_params": [ 3.956, 2.853, -4.674, -32.683, -69.355, -115.704 ], "C_alpha": [ 4.807, -4.194, -2.217 ] }, { "index": 271, "bpaa": "GC-ser", "z_directions": "-", "nt1": "///A/799", "nt2": "///A/661", "aa": "///L/42", "trs_dist": -7.866, "rot_dist": -36.543, "six_params": [ 2.062, -6.057, -4.576, -4.195, -32.176, -17.038 ], "C_alpha": [ 2.250, -6.616, -3.606 ] }, { "index": 272, "bpaa": "AU-glu", "z_directions": "+", "nt1": "///A/815", "nt2": "///A/822", "aa": "///L/51", "trs_dist": -8.772, "rot_dist": 102.894, "six_params": [ -6.349, 4.866, -3.601, 8.440, 20.608, 101.131 ], "C_alpha": [ -8.277, -2.076, -2.036 ] }, { "index": 273, "bpaa": "AU-gly", "z_directions": "+", "nt1": "///A/815", "nt2": "///A/822", "aa": "///L/52", "trs_dist": 6.567, "rot_dist": 85.122, "six_params": [ -6.554, -0.406, 0.002, -75.032, 14.596, 40.723 ], "C_alpha": [ -6.059, -2.312, 1.023 ] }, { "index": 274, "bpaa": "GU-gly", "z_directions": "-", "nt1": "///A/821", "nt2": "///A/816", "aa": "///L/52", "trs_dist": 6.829, "rot_dist": 175.836, "six_params": [ -3.711, 5.343, 2.078, -29.707, 70.841, 174.685 ], "C_alpha": [ -6.053, -1.970, 2.470 ] }, { "index": 275, "bpaa": "AU-glu", "z_directions": "-", "nt1": "///A/823", "nt2": "///A/814", "aa": "///L/51", "trs_dist": -9.182, "rot_dist": 56.689, "six_params": [ -2.247, 8.888, -0.512, -27.927, -11.757, 48.489 ], "C_alpha": [ -5.369, 6.878, -2.869 ] }, { "index": 276, "bpaa": "AU-gly", "z_directions": "+", "nt1": "///A/838", "nt2": "///A/918", "aa": "///Z/25", "trs_dist": 6.783, "rot_dist": 76.942, "six_params": [ -4.984, 1.042, 4.481, 21.746, -34.905, 66.519 ], "C_alpha": [ -5.317, -3.094, 2.906 ] }, { "index": 277, "bpaa": "GC-gln", "z_directions": "+", "nt1": "///A/843", "nt2": "///A/912", "aa": "///W/29", "trs_dist": 9.880, "rot_dist": -76.941, "six_params": [ -0.905, -7.343, 6.549, 38.626, -53.474, -42.073 ], "C_alpha": [ -6.137, -7.233, 2.755 ] }, { "index": 278, "bpaa": "GC-phe", "z_directions": "-", "nt1": "///A/844", "nt2": "///A/911", "aa": "///W/26", "trs_dist": 7.634, "rot_dist": 171.486, "six_params": [ -1.889, 6.886, 2.701, -1.860, -28.646, 171.211 ], "C_alpha": [ -7.084, -1.941, 2.030 ] }, { "index": 279, "bpaa": "GC-gly", "z_directions": "-", "nt1": "///A/844", "nt2": "///A/911", "aa": "///W/27", "trs_dist": 7.466, "rot_dist": -145.209, "six_params": [ -3.905, -5.556, 3.103, 28.037, -0.471, -144.105 ], "C_alpha": [ -7.044, 1.810, 1.613 ] }, { "index": 280, "bpaa": "GC-gly", "z_directions": "-", "nt1": "///A/844", "nt2": "///A/911", "aa": "///W/28", "trs_dist": -7.936, "rot_dist": -150.095, "six_params": [ -4.953, -6.200, 0.050, -7.529, -62.888, -144.705 ], "C_alpha": [ -7.305, 2.227, -2.147 ] }, { "index": 281, "bpaa": "GC-phe", "z_directions": "-", "nt1": "///A/845", "nt2": "///A/910", "aa": "///W/26", "trs_dist": -8.946, "rot_dist": 142.715, "six_params": [ 0.831, 8.663, -2.073, -23.402, -23.695, 141.019 ], "C_alpha": [ -7.135, 4.031, -3.567 ] }, { "index": 282, "bpaa": "GA-phe", "z_directions": "-", "nt1": "///A/846", "nt2": "///A/909", "aa": "///W/26", "trs_dist": -10.039, "rot_dist": 120.939, "six_params": [ 3.979, 7.250, -5.692, -30.989, -20.642, 117.322 ], "C_alpha": [ -2.096, 7.244, -6.621 ] }, { "index": 283, "bpaa": "GC-phe", "z_directions": "+", "nt1": "///A/893", "nt2": "///A/862", "aa": "///M/29", "trs_dist": 11.364, "rot_dist": -80.672, "six_params": [ -6.551, -3.808, 8.469, 67.977, -12.146, -44.595 ], "C_alpha": [ -9.620, -4.367, 4.201 ] }, { "index": 284, "bpaa": "AU-phe", "z_directions": "+", "nt1": "///A/894", "nt2": "///A/861", "aa": "///M/29", "trs_dist": -11.051, "rot_dist": -97.953, "six_params": [ -9.360, -3.570, 4.666, 68.572, -33.473, -66.833 ], "C_alpha": [ -10.920, 1.499, -0.849 ] }, { "index": 285, "bpaa": "AU-lys", "z_directions": "-", "nt1": "///A/898", "nt2": "///A/857", "aa": "///M/8", "trs_dist": 11.727, "rot_dist": 166.264, "six_params": [ 7.205, 8.657, 3.265, 52.688, 34.784, 163.864 ], "C_alpha": [ -5.590, 9.285, 4.473 ] }, { "index": 286, "bpaa": "AU-glu", "z_directions": "+", "nt1": "///A/915", "nt2": "///A/840", "aa": "///Z/42", "trs_dist": 7.133, "rot_dist": 48.569, "six_params": [ -7.067, -0.596, 0.759, -10.722, -0.403, 47.439 ], "C_alpha": [ -6.271, -3.315, 0.798 ] }, { "index": 287, "bpaa": "GC-gly", "z_directions": "-", "nt1": "///A/917", "nt2": "///A/839", "aa": "///Z/25", "trs_dist": 6.654, "rot_dist": 147.578, "six_params": [ -3.168, 5.805, -0.740, 52.046, -6.448, 143.737 ], "C_alpha": [ -6.320, -1.295, 1.712 ] }, { "index": 288, "bpaa": "GC-met", "z_directions": "-", "nt1": "///A/917", "nt2": "///A/839", "aa": "///Z/46", "trs_dist": -10.644, "rot_dist": -105.640, "six_params": [ 0.014, -7.083, -7.945, 4.516, 88.100, -65.374 ], "C_alpha": [ -8.393, -2.681, -5.965 ] }, { "index": 289, "bpaa": "AG-met", "z_directions": "+", "nt1": "///A/950", "nt2": "///A/946", "aa": "///M/83", "trs_dist": 9.746, "rot_dist": 95.451, "six_params": [ -7.708, -5.443, 2.439, -1.726, -12.363, 94.828 ], "C_alpha": [ -1.384, -9.495, 1.684 ] }, { "index": 290, "bpaa": "GU-met", "z_directions": "+", "nt1": "///A/952", "nt2": "///A/945", "aa": "///M/83", "trs_dist": -10.499, "rot_dist": 41.891, "six_params": [ -10.363, 1.353, -1.001, -16.721, -17.015, 34.688 ], "C_alpha": [ -9.948, -1.969, -2.695 ] }, { "index": 291, "bpaa": "AG-asn", "z_directions": "+", "nt1": "///A/965", "nt2": "///A/979", "aa": "///Z/13", "trs_dist": 8.526, "rot_dist": 173.359, "six_params": [ -3.386, -7.781, -0.826, -1.814, 24.745, 173.200 ], "C_alpha": [ 7.571, -3.925, 0.063 ] }, { "index": 292, "bpaa": "GC-gln", "z_directions": "+", "nt1": "///A/983", "nt2": "///A/1152", "aa": "///R/91", "trs_dist": -10.484, "rot_dist": -76.778, "six_params": [ -9.411, 4.545, 0.824, 9.540, -75.706, -9.240 ], "C_alpha": [ -7.649, 5.348, -4.765 ] }, { "index": 293, "bpaa": "AU-gly", "z_directions": "+", "nt1": "///A/986", "nt2": "///A/1150", "aa": "///R/9", "trs_dist": -8.755, "rot_dist": -84.004, "six_params": [ -5.309, 5.260, -4.561, -74.452, 22.623, -34.525 ], "C_alpha": [ -5.554, 3.610, -5.745 ] }, { "index": 294, "bpaa": "AG-ala", "z_directions": "+", "nt1": "///A/1019", "nt2": "///A/1115", "aa": "///6/5", "trs_dist": 7.579, "rot_dist": 134.222, "six_params": [ -6.603, -2.882, 2.354, -57.723, 7.309, 127.141 ], "C_alpha": [ -1.707, -6.309, 3.851 ] }, { "index": 295, "bpaa": "GC-val", "z_directions": "-", "nt1": "///A/1021", "nt2": "///A/1113", "aa": "///6/23", "trs_dist": 9.927, "rot_dist": -149.680, "six_params": [ -2.497, -9.539, -1.146, -5.738, 37.568, -147.887 ], "C_alpha": [ -9.906, -0.083, 0.203 ] }, { "index": 296, "bpaa": "GC-gly", "z_directions": "+", "nt1": "///A/1021", "nt2": "///A/1113", "aa": "///6/38", "trs_dist": -8.326, "rot_dist": 108.129, "six_params": [ -2.553, 6.566, -4.438, 11.811, -17.207, 106.726 ], "C_alpha": [ -6.763, 2.635, -4.066 ] }, { "index": 297, "bpaa": "GA-ile", "z_directions": "-", "nt1": "///A/1046", "nt2": "///A/1093", "aa": "///I/5", "trs_dist": 10.555, "rot_dist": -140.531, "six_params": [ 0.396, 6.936, 7.947, -70.089, -52.679, -124.173 ], "C_alpha": [ 8.031, 6.546, 2.029 ] }, { "index": 298, "bpaa": "AU-tyr", "z_directions": "+", "nt1": "///A/1047", "nt2": "///A/1071", "aa": "///I/8", "trs_dist": 12.430, "rot_dist": 90.406, "six_params": [ -4.020, 2.427, 11.509, -85.662, 26.593, 12.759 ], "C_alpha": [ -2.787, 9.628, 7.348 ] }, { "index": 299, "bpaa": "GC-tyr", "z_directions": "+", "nt1": "///A/1048", "nt2": "///A/1070", "aa": "///I/8", "trs_dist": 11.985, "rot_dist": -80.359, "six_params": [ -3.306, 6.643, 9.412, -65.318, 31.619, -37.181 ], "C_alpha": [ 2.289, 10.705, 4.890 ] }, { "index": 300, "bpaa": "GC-thr", "z_directions": "+", "nt1": "///A/1048", "nt2": "///A/1070", "aa": "///I/128", "trs_dist": 7.330, "rot_dist": 122.544, "six_params": [ -5.333, 4.004, 3.043, -26.047, -27.375, 118.936 ], "C_alpha": [ -6.766, -2.722, 0.736 ] }, { "index": 301, "bpaa": "GC-gly", "z_directions": "+", "nt1": "///A/1048", "nt2": "///A/1070", "aa": "///I/131", "trs_dist": 6.718, "rot_dist": 107.471, "six_params": [ -6.050, -2.805, 0.809, -68.233, 20.157, 86.688 ], "C_alpha": [ -3.079, -5.035, 3.233 ] }, { "index": 302, "bpaa": "GC-pro", "z_directions": "-", "nt1": "///A/1052", "nt2": "///A/1066", "aa": "///I/93", "trs_dist": -8.486, "rot_dist": -139.807, "six_params": [ -2.072, -8.228, 0.149, 4.100, -50.269, -135.357 ], "C_alpha": [ -8.346, -1.382, -1.049 ] }, { "index": 303, "bpaa": "GC-ser", "z_directions": "+", "nt1": "///A/1052", "nt2": "///A/1066", "aa": "///I/135", "trs_dist": -8.720, "rot_dist": 91.141, "six_params": [ -3.461, 8.001, -0.174, -31.310, -34.896, 80.540 ], "C_alpha": [ -7.102, 3.838, -3.305 ] }, { "index": 304, "bpaa": "GC-ser", "z_directions": "-", "nt1": "///A/1053", "nt2": "///A/1065", "aa": "///I/90", "trs_dist": -9.138, "rot_dist": 84.217, "six_params": [ -6.893, 3.216, 5.065, -26.941, -79.791, 0.430 ], "C_alpha": [ -8.281, 3.647, -1.317 ] }, { "index": 305, "bpaa": "GC-ala", "z_directions": "-", "nt1": "///A/1053", "nt2": "///A/1065", "aa": "///I/91", "trs_dist": 6.895, "rot_dist": 65.380, "six_params": [ -5.857, 3.563, 0.736, -32.050, 13.540, 56.244 ], "C_alpha": [ -6.867, 0.552, 0.389 ] }, { "index": 306, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/1053", "nt2": "///A/1065", "aa": "///I/92", "trs_dist": -5.669, "rot_dist": 93.868, "six_params": [ -3.444, 1.911, -4.078, 40.305, 12.563, 85.898 ], "C_alpha": [ -4.922, -0.335, -2.786 ] }, { "index": 307, "bpaa": "GC-pro", "z_directions": "-", "nt1": "///A/1053", "nt2": "///A/1065", "aa": "///I/93", "trs_dist": -6.955, "rot_dist": -157.296, "six_params": [ -4.785, -3.687, -3.448, 12.126, -48.480, -154.915 ], "C_alpha": [ -3.784, 2.116, -5.490 ] }, { "index": 308, "bpaa": "GC-ser", "z_directions": "+", "nt1": "///A/1053", "nt2": "///A/1065", "aa": "///I/135", "trs_dist": -9.789, "rot_dist": 84.845, "six_params": [ 0.597, 8.511, -4.799, -38.139, -45.251, 63.815 ], "C_alpha": [ -1.012, 7.100, -6.655 ] }, { "index": 309, "bpaa": "GC-ser", "z_directions": "-", "nt1": "///A/1064", "nt2": "///A/1054", "aa": "///I/90", "trs_dist": 8.872, "rot_dist": -138.739, "six_params": [ 2.275, -1.136, 8.500, 80.490, 24.534, -123.325 ], "C_alpha": [ -3.613, -6.271, 5.144 ] }, { "index": 310, "bpaa": "GC-ala", "z_directions": "+", "nt1": "///A/1064", "nt2": "///A/1054", "aa": "///I/91", "trs_dist": 6.097, "rot_dist": 156.051, "six_params": [ -4.640, 3.204, 2.319, -8.565, 33.937, 154.870 ], "C_alpha": [ -4.164, -2.963, 3.344 ] }, { "index": 311, "bpaa": "AU-gln", "z_directions": "+", "nt1": "///A/1080", "nt2": "///A/1091", "aa": "///I/6", "trs_dist": 11.289, "rot_dist": 155.973, "six_params": [ -5.222, -9.956, 1.025, 26.786, 33.026, 154.189 ], "C_alpha": [ 8.688, -7.175, 0.146 ] }, { "index": 312, "bpaa": "AU-arg", "z_directions": "+", "nt1": "///A/1080", "nt2": "///A/1091", "aa": "///6/12", "trs_dist": -12.271, "rot_dist": -58.310, "six_params": [ -12.127, -1.045, -1.559, 52.562, 14.399, -21.581 ], "C_alpha": [ -12.144, 1.715, -0.371 ] }, { "index": 313, "bpaa": "GC-gln", "z_directions": "+", "nt1": "///A/1081", "nt2": "///A/1090", "aa": "///I/6", "trs_dist": -10.072, "rot_dist": 126.586, "six_params": [ -6.843, -7.179, -1.755, 33.227, 15.777, 123.461 ], "C_alpha": [ 2.330, -9.373, -2.791 ] }, { "index": 314, "bpaa": "GC-ala", "z_directions": "-", "nt1": "///A/1114", "nt2": "///A/1020", "aa": "///6/5", "trs_dist": 8.100, "rot_dist": 134.911, "six_params": [ -4.950, 6.282, 1.286, -28.037, 49.356, 128.330 ], "C_alpha": [ -7.869, -0.970, 1.704 ] }, { "index": 315, "bpaa": "GC-gly", "z_directions": "-", "nt1": "///A/1114", "nt2": "///A/1020", "aa": "///6/38", "trs_dist": -8.197, "rot_dist": 60.285, "six_params": [ -6.251, 5.298, -0.204, 14.233, -28.390, 51.924 ], "C_alpha": [ -7.826, 2.180, -1.080 ] }, { "index": 316, "bpaa": "GC-gly", "z_directions": "+", "nt1": "///A/1127", "nt2": "///A/996", "aa": "///J/107", "trs_dist": 8.686, "rot_dist": 104.149, "six_params": [ -5.758, 6.188, -2.000, 70.847, -4.153, 81.980 ], "C_alpha": [ -8.456, 0.919, 1.765 ] }, { "index": 317, "bpaa": "GC-met", "z_directions": "-", "nt1": "///A/1127", "nt2": "///A/996", "aa": "///J/108", "trs_dist": 7.233, "rot_dist": 104.997, "six_params": [ -5.746, 2.476, -3.628, 2.234, 76.004, 78.798 ], "C_alpha": [ -6.805, -2.358, 0.728 ] }, { "index": 318, "bpaa": "GC-thr", "z_directions": "+", "nt1": "///A/1128", "nt2": "///A/995", "aa": "///J/30", "trs_dist": 8.821, "rot_dist": -77.435, "six_params": [ -7.475, -1.954, 4.255, 68.658, -28.255, -23.782 ], "C_alpha": [ -8.635, -1.719, 0.597 ] }, { "index": 319, "bpaa": "GC-met", "z_directions": "-", "nt1": "///A/1128", "nt2": "///A/995", "aa": "///J/108", "trs_dist": -8.455, "rot_dist": 79.440, "six_params": [ -1.623, 4.816, -6.757, 21.647, 67.868, 37.761 ], "C_alpha": [ -6.474, 3.953, -3.736 ] }, { "index": 320, "bpaa": "GC-lys", "z_directions": "-", "nt1": "///A/1151", "nt2": "///A/984", "aa": "///Q/54", "trs_dist": -11.216, "rot_dist": -137.598, "six_params": [ 6.634, -6.121, -6.658, 45.371, -4.438, -133.808 ], "C_alpha": [ -0.157, -7.598, -8.253 ] }, { "index": 321, "bpaa": "GC-gly", "z_directions": "-", "nt1": "///A/1151", "nt2": "///A/984", "aa": "///R/9", "trs_dist": 7.622, "rot_dist": 166.198, "six_params": [ 0.765, 7.272, 2.154, -5.976, 71.744, 162.919 ], "C_alpha": [ -7.027, 2.824, 0.939 ] }, { "index": 322, "bpaa": "GC-lys", "z_directions": "+", "nt1": "///A/1151", "nt2": "///A/984", "aa": "///R/10", "trs_dist": -9.108, "rot_dist": -80.612, "six_params": [ -7.803, -4.100, 2.293, 44.969, -27.754, -63.238 ], "C_alpha": [ -8.984, 0.481, -1.335 ] }, { "index": 323, "bpaa": "GC-his", "z_directions": "-", "nt1": "///A/1153", "nt2": "///A/982", "aa": "///R/89", "trs_dist": 10.945, "rot_dist": 177.518, "six_params": [ -5.583, 9.215, -1.925, 35.928, -6.354, 177.387 ], "C_alpha": [ -9.524, -5.341, 0.708 ] }, { "index": 324, "bpaa": "GC-gln", "z_directions": "-", "nt1": "///A/1153", "nt2": "///A/982", "aa": "///R/91", "trs_dist": -9.674, "rot_dist": 166.205, "six_params": [ -1.265, 7.872, -5.480, 57.405, -25.598, 163.818 ], "C_alpha": [ -9.558, 0.853, -1.200 ] }, { "index": 325, "bpaa": "GC-gly", "z_directions": "+", "nt1": "///A/1180", "nt2": "///A/804", "aa": "///L/24", "trs_dist": -8.103, "rot_dist": -133.882, "six_params": [ 6.991, 3.262, -2.479, -21.887, -33.087, -130.787 ], "C_alpha": [ 5.802, -5.575, -0.955 ] }, { "index": 326, "bpaa": "GC-ser", "z_directions": "-", "nt1": "///A/1180", "nt2": "///A/804", "aa": "///L/25", "trs_dist": 6.684, "rot_dist": -162.616, "six_params": [ 3.276, 5.647, -1.435, 50.790, 13.884, -160.585 ], "C_alpha": [ 6.272, -2.212, 0.742 ] }, { "index": 327, "bpaa": "AU-gly", "z_directions": "+", "nt1": "///A/1181", "nt2": "///A/803", "aa": "///L/24", "trs_dist": -7.894, "rot_dist": -169.225, "six_params": [ 5.542, 2.256, -5.148, -29.507, -25.890, -168.558 ], "C_alpha": [ 1.720, -6.468, -4.181 ] }, { "index": 328, "bpaa": "AU-ser", "z_directions": "-", "nt1": "///A/1181", "nt2": "///A/803", "aa": "///L/25", "trs_dist": -6.213, "rot_dist": 164.847, "six_params": [ -3.251, -2.938, -4.405, -54.693, 3.871, 162.916 ], "C_alpha": [ 4.059, -4.023, -2.460 ] }, { "index": 329, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/1182", "nt2": "///A/802", "aa": "///L/18", "trs_dist": 9.767, "rot_dist": 51.440, "six_params": [ 7.288, -5.857, 2.824, -4.673, 45.328, 24.530 ], "C_alpha": [ 8.917, -4.000, 0.045 ] }, { "index": 330, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/1182", "nt2": "///A/802", "aa": "///L/21", "trs_dist": -9.446, "rot_dist": -96.819, "six_params": [ 8.417, -3.629, 2.284, 30.204, 46.455, -82.861 ], "C_alpha": [ 3.919, -8.314, -2.163 ] }, { "index": 331, "bpaa": "GC-ser", "z_directions": "-", "nt1": "///A/1182", "nt2": "///A/802", "aa": "///L/25", "trs_dist": -6.638, "rot_dist": 143.811, "six_params": [ -0.681, -0.074, -6.603, -53.583, 12.896, 138.985 ], "C_alpha": [ 2.341, -2.367, -5.752 ] }, { "index": 332, "bpaa": "GU-arg", "z_directions": "-", "nt1": "///A/1184", "nt2": "///A/1236", "aa": "///L/18", "trs_dist": -8.955, "rot_dist": -45.032, "six_params": [ 5.823, -5.424, -4.108, 19.195, 38.735, -12.924 ], "C_alpha": [ 3.453, -4.942, -6.613 ] }, { "index": 333, "bpaa": "GC-leu", "z_directions": "+", "nt1": "///A/1189", "nt2": "///A/1230", "aa": "///L/3", "trs_dist": 8.327, "rot_dist": 95.715, "six_params": [ -6.434, 4.732, -2.358, 51.065, 39.265, 75.065 ], "C_alpha": [ -8.059, -0.147, 2.108 ] }, { "index": 334, "bpaa": "GC-asn", "z_directions": "+", "nt1": "///A/1189", "nt2": "///A/1230", "aa": "///L/4", "trs_dist": 6.535, "rot_dist": 80.460, "six_params": [ -3.427, 0.489, 5.543, 45.346, -60.933, 28.820 ], "C_alpha": [ -5.257, -2.632, 2.854 ] }, { "index": 335, "bpaa": "UU-asn", "z_directions": "-", "nt1": "///A/1190", "nt2": "///A/1229", "aa": "///L/4", "trs_dist": -6.810, "rot_dist": 89.703, "six_params": [ -1.577, 2.803, -6.003, 0.766, 88.901, 13.432 ], "C_alpha": [ -5.620, 2.189, -3.167 ] }, { "index": 336, "bpaa": "GA-lys", "z_directions": "-", "nt1": "///A/1210", "nt2": "///A/1213", "aa": "///R/71", "trs_dist": 14.205, "rot_dist": -95.883, "six_params": [ 13.717, 0.970, 3.561, -66.046, -50.754, -52.602 ], "C_alpha": [ 11.894, -1.008, 7.703 ] }, { "index": 337, "bpaa": "AU-lys", "z_directions": "-", "nt1": "///A/1214", "nt2": "///A/1209", "aa": "///Q/16", "trs_dist": 11.645, "rot_dist": -46.316, "six_params": [ 9.012, 6.894, -2.622, 40.481, -22.502, -0.363 ], "C_alpha": [ 9.127, 7.032, 1.672 ] }, { "index": 338, "bpaa": "AU-ala", "z_directions": "+", "nt1": "///A/1233", "nt2": "///A/1186", "aa": "///Q/2", "trs_dist": 8.321, "rot_dist": 25.020, "six_params": [ -8.269, -0.540, -0.753, 2.240, 20.993, 13.504 ], "C_alpha": [ -8.137, -1.507, 0.753 ] }, { "index": 339, "bpaa": "AU-val", "z_directions": "+", "nt1": "///A/1233", "nt2": "///A/1186", "aa": "///Q/4", "trs_dist": 9.665, "rot_dist": 26.884, "six_params": [ -6.711, -4.800, 5.033, 6.055, -11.162, 23.744 ], "C_alpha": [ -5.949, -6.404, 4.083 ] }, { "index": 340, "bpaa": "AU-val", "z_directions": "+", "nt1": "///A/1234", "nt2": "///A/1185", "aa": "///Q/4", "trs_dist": -8.444, "rot_dist": -28.817, "six_params": [ -8.273, -1.574, 0.624, -8.816, -27.435, -0.025 ], "C_alpha": [ -8.181, -1.604, -1.243 ] }, { "index": 341, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///A/1237", "nt2": "///A/1183", "aa": "///L/18", "trs_dist": 10.230, "rot_dist": -179.727, "six_params": [ -5.281, 8.755, -0.338, 44.070, 8.693, -179.705 ], "C_alpha": [ 8.156, 5.192, 3.344 ] }, { "index": 342, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///A/1237", "nt2": "///A/1183", "aa": "///L/21", "trs_dist": 9.059, "rot_dist": -89.786, "six_params": [ -3.926, 7.921, 1.976, 40.293, 42.703, -71.259 ], "C_alpha": [ 1.815, 6.731, 5.772 ] }, { "index": 343, "bpaa": "AG-ile", "z_directions": "+", "nt1": "///A/1241", "nt2": "///A/575", "aa": "///E/76", "trs_dist": 7.221, "rot_dist": 134.656, "six_params": [ -5.224, 0.174, 4.982, -4.800, -9.080, 134.463 ], "C_alpha": [ -2.510, -5.008, 4.553 ] }, { "index": 344, "bpaa": "AG-arg", "z_directions": "+", "nt1": "///A/1241", "nt2": "///A/575", "aa": "///Q/6", "trs_dist": -13.702, "rot_dist": 154.325, "six_params": [ -0.578, -12.753, -4.977, -14.417, 33.897, 152.914 ], "C_alpha": [ 12.474, -4.807, -2.970 ] }, { "index": 345, "bpaa": "GC-ile", "z_directions": "+", "nt1": "///A/1243", "nt2": "///A/574", "aa": "///E/76", "trs_dist": -7.209, "rot_dist": 88.553, "six_params": [ -4.565, 5.572, -0.286, -31.262, -17.621, 82.371 ], "C_alpha": [ -6.690, 1.052, -2.444 ] }, { "index": 346, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///A/1243", "nt2": "///A/574", "aa": "///Q/6", "trs_dist": -12.796, "rot_dist": 97.659, "six_params": [ -3.943, -10.147, -6.724, -21.428, 28.369, 92.532 ], "C_alpha": [ 4.425, -11.452, -3.567 ] }, { "index": 347, "bpaa": "AU-gln", "z_directions": "-", "nt1": "///A/1249", "nt2": "///A/2004", "aa": "///2/4", "trs_dist": 10.976, "rot_dist": -69.815, "six_params": [ 2.148, -7.747, 7.473, 6.361, -23.195, -66.040 ], "C_alpha": [ -3.910, -7.189, 7.315 ] }, { "index": 348, "bpaa": "AU-lys", "z_directions": "-", "nt1": "///A/1249", "nt2": "///A/2004", "aa": "///2/7", "trs_dist": 7.950, "rot_dist": -157.746, "six_params": [ 0.893, -7.804, -1.229, -61.668, 31.764, -152.854 ], "C_alpha": [ -6.922, -2.805, 2.695 ] }, { "index": 349, "bpaa": "UU-gln", "z_directions": "-", "nt1": "///A/1250", "nt2": "///A/2003", "aa": "///2/4", "trs_dist": 10.176, "rot_dist": -157.437, "six_params": [ -7.528, -5.406, 4.202, -5.582, -34.182, -156.351 ], "C_alpha": [ -6.872, 7.219, 2.060 ] }, { "index": 350, "bpaa": "GA-val", "z_directions": "-", "nt1": "///A/1251", "nt2": "///A/2002", "aa": "///2/3", "trs_dist": -7.964, "rot_dist": 92.747, "six_params": [ -1.744, 5.501, -5.488, 30.629, -3.000, 88.614 ], "C_alpha": [ -5.880, 3.698, -3.883 ] }, { "index": 351, "bpaa": "GU-ser", "z_directions": "-", "nt1": "///A/1253", "nt2": "///A/1254", "aa": "///S/13", "trs_dist": 10.671, "rot_dist": 83.937, "six_params": [ 10.606, 1.158, -0.164, 83.144, -1.912, 12.549 ], "C_alpha": [ 10.431, 2.062, 0.811 ] }, { "index": 352, "bpaa": "GU-gln", "z_directions": "+", "nt1": "///A/1253", "nt2": "///A/1254", "aa": "///S/15", "trs_dist": -10.819, "rot_dist": -161.043, "six_params": [ -4.879, 8.739, -4.109, 18.024, -1.308, -160.802 ], "C_alpha": [ 8.337, 6.321, -2.737 ] }, { "index": 353, "bpaa": "GU-lys", "z_directions": "+", "nt1": "///A/1253", "nt2": "///A/1254", "aa": "///S/16", "trs_dist": 11.123, "rot_dist": -156.936, "six_params": [ -5.824, 7.497, 5.797, -79.781, 30.238, -148.451 ], "C_alpha": [ 8.241, 7.408, 0.910 ] }, { "index": 354, "bpaa": "GU-arg", "z_directions": "+", "nt1": "///A/1253", "nt2": "///A/1254", "aa": "///S/99", "trs_dist": 10.671, "rot_dist": 118.698, "six_params": [ 2.935, -10.215, 0.951, -7.944, 47.535, 112.099 ], "C_alpha": [ 10.232, -3.005, 0.376 ] }, { "index": 355, "bpaa": "AG-lys", "z_directions": "+", "nt1": "///A/1255", "nt2": "///A/1999", "aa": "///S/16", "trs_dist": -12.341, "rot_dist": -169.739, "six_params": [ -0.255, 11.096, 5.396, -62.286, 57.123, -166.121 ], "C_alpha": [ 12.240, 0.687, -1.393 ] }, { "index": 356, "bpaa": "AU-lys", "z_directions": "+", "nt1": "///A/1256", "nt2": "///A/1998", "aa": "///S/16", "trs_dist": -13.121, "rot_dist": 149.521, "six_params": [ -7.109, -10.699, 2.676, 25.717, -85.255, 136.730 ], "C_alpha": [ 7.399, -9.592, -5.035 ] }, { "index": 357, "bpaa": "GC-asn", "z_directions": "+", "nt1": "///A/1264", "nt2": "///A/1280", "aa": "///N/23", "trs_dist": -9.171, "rot_dist": 45.760, "six_params": [ -7.192, 5.195, -2.324, -43.707, 9.214, 10.203 ], "C_alpha": [ -7.764, 3.395, -3.510 ] }, { "index": 358, "bpaa": "AU-asn", "z_directions": "-", "nt1": "///A/1281", "nt2": "///A/1263", "aa": "///N/23", "trs_dist": -9.420, "rot_dist": 141.116, "six_params": [ -0.361, 9.328, -1.268, -12.452, 44.924, 137.501 ], "C_alpha": [ -8.894, 2.366, -2.021 ] }, { "index": 359, "bpaa": "GC-lys", "z_directions": "-", "nt1": "///A/1325", "nt2": "///A/1301", "aa": "///T/65", "trs_dist": 9.069, "rot_dist": 75.422, "six_params": [ 8.702, 1.524, -2.049, 38.983, -64.501, 3.128 ], "C_alpha": [ 8.264, 1.518, 3.404 ] }, { "index": 360, "bpaa": "UU-lys", "z_directions": "+", "nt1": "///A/1327", "nt2": "///A/1299", "aa": "///T/63", "trs_dist": -6.044, "rot_dist": 65.268, "six_params": [ 0.166, -3.036, -5.224, 38.606, -50.843, 14.362 ], "C_alpha": [ 2.711, -0.875, -5.329 ] }, { "index": 361, "bpaa": "GA-ser", "z_directions": "+", "nt1": "///A/1351", "nt2": "///A/1354", "aa": "///X/2", "trs_dist": 8.897, "rot_dist": -157.659, "six_params": [ -0.867, 6.229, 6.293, -42.680, 33.658, -154.844 ], "C_alpha": [ 8.038, 1.162, 3.618 ] }, { "index": 362, "bpaa": "GC-val", "z_directions": "-", "nt1": "///A/1442", "nt2": "///A/2691", "aa": "///N/60", "trs_dist": -10.840, "rot_dist": 29.063, "six_params": [ 5.061, 9.000, -3.301, -0.959, 21.843, 19.266 ], "C_alpha": [ 2.765, 9.556, -4.277 ] }, { "index": 363, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/1442", "nt2": "///A/2691", "aa": "///N/64", "trs_dist": -11.135, "rot_dist": 32.310, "six_params": [ 7.189, 2.683, -8.069, 24.640, -4.003, 20.679 ], "C_alpha": [ 6.551, 5.589, -7.063 ] }, { "index": 364, "bpaa": "GC-asp", "z_directions": "+", "nt1": "///A/1478", "nt2": "///A/1486", "aa": "///C/98", "trs_dist": -8.725, "rot_dist": 45.472, "six_params": [ -3.454, 6.773, -4.281, -19.117, -40.792, 6.354 ], "C_alpha": [ -1.864, 5.788, -6.233 ] }, { "index": 365, "bpaa": "GU-asp", "z_directions": "-", "nt1": "///A/1487", "nt2": "///A/1476", "aa": "///C/98", "trs_dist": 7.980, "rot_dist": 132.620, "six_params": [ -3.956, 6.905, -0.592, 30.746, -4.469, 130.707 ], "C_alpha": [ -7.851, -0.764, 1.091 ] }, { "index": 366, "bpaa": "GC-his", "z_directions": "-", "nt1": "///A/1558", "nt2": "///A/1555", "aa": "///C/58", "trs_dist": -10.860, "rot_dist": 130.162, "six_params": [ -1.732, 10.579, -1.738, -18.587, -16.906, 128.853 ], "C_alpha": [ -9.710, 3.171, -3.634 ] }, { "index": 367, "bpaa": "GC-met", "z_directions": "+", "nt1": "///A/1609", "nt2": "///A/1602", "aa": "///4/1", "trs_dist": 7.987, "rot_dist": 68.096, "six_params": [ -6.670, 2.169, -3.822, 54.228, 40.424, 8.415 ], "C_alpha": [ -7.563, 2.564, -0.015 ] }, { "index": 368, "bpaa": "GC-asp", "z_directions": "+", "nt1": "///A/1639", "nt2": "///A/1995", "aa": "///N/106", "trs_dist": -7.273, "rot_dist": 75.106, "six_params": [ -6.368, 3.363, 1.020, 9.691, -66.889, 34.905 ], "C_alpha": [ -6.689, 1.479, -2.380 ] }, { "index": 369, "bpaa": "GC-asn", "z_directions": "+", "nt1": "///A/1639", "nt2": "///A/1995", "aa": "///N/107", "trs_dist": -8.189, "rot_dist": -79.932, "six_params": [ -4.864, -5.682, -3.335, -18.887, 32.748, -71.787 ], "C_alpha": [ -7.968, -1.724, -0.888 ] }, { "index": 370, "bpaa": "AA-ser", "z_directions": "-", "nt1": "///A/1642", "nt2": "///A/1992", "aa": "///N/11", "trs_dist": 9.460, "rot_dist": 83.848, "six_params": [ 8.499, -0.387, -4.137, -19.355, -77.368, 28.373 ], "C_alpha": [ 9.063, 1.714, 2.151 ] }, { "index": 371, "bpaa": "AU-gln", "z_directions": "+", "nt1": "///A/1655", "nt2": "///A/1982", "aa": "///K/3", "trs_dist": 8.877, "rot_dist": -19.363, "six_params": [ -8.299, -0.747, 3.061, -18.292, 3.018, -5.611 ], "C_alpha": [ -8.201, 0.149, 3.344 ] }, { "index": 372, "bpaa": "AU-tyr", "z_directions": "-", "nt1": "///A/1655", "nt2": "///A/1982", "aa": "///K/32", "trs_dist": -10.195, "rot_dist": -166.626, "six_params": [ -0.878, -8.242, -5.935, -48.711, 19.174, -165.089 ], "C_alpha": [ -10.020, 0.237, -1.807 ] }, { "index": 373, "bpaa": "GC-gln", "z_directions": "+", "nt1": "///A/1656", "nt2": "///A/1981", "aa": "///K/3", "trs_dist": -10.404, "rot_dist": -31.476, "six_params": [ -9.934, 2.942, -0.955, -11.018, -4.652, -29.168 ], "C_alpha": [ -8.844, 5.191, -1.647 ] }, { "index": 374, "bpaa": "AU-thr", "z_directions": "+", "nt1": "///A/1659", "nt2": "///A/1980", "aa": "///K/4", "trs_dist": -11.030, "rot_dist": -179.480, "six_params": [ -7.513, 0.954, -8.020, 5.466, 78.832, -179.326 ], "C_alpha": [ 1.115, 10.895, -1.382 ] }, { "index": 375, "bpaa": "AU-gln", "z_directions": "-", "nt1": "///A/1659", "nt2": "///A/1980", "aa": "///K/5", "trs_dist": 9.973, "rot_dist": 72.745, "six_params": [ 6.485, 5.957, 4.683, -49.909, -4.931, 54.513 ], "C_alpha": [ 2.219, 9.495, 1.988 ] }, { "index": 376, "bpaa": "GU-pro", "z_directions": "-", "nt1": "///A/1685", "nt2": "///A/1682", "aa": "///C/8", "trs_dist": 11.362, "rot_dist": 177.145, "six_params": [ 5.316, 8.103, 5.931, 4.067, 57.042, 176.748 ], "C_alpha": [ -7.758, 7.809, 2.918 ] }, { "index": 377, "bpaa": "GU-arg", "z_directions": "+", "nt1": "///A/1685", "nt2": "///A/1682", "aa": "///C/14", "trs_dist": 14.316, "rot_dist": 65.693, "six_params": [ -5.424, 9.865, 8.845, -54.958, 23.863, 28.292 ], "C_alpha": [ -7.096, 11.698, 4.223 ] }, { "index": 378, "bpaa": "AG-arg", "z_directions": "-", "nt1": "///A/1778", "nt2": "///A/1815", "aa": "///C/221", "trs_dist": -11.297, "rot_dist": 95.365, "six_params": [ 9.735, -3.930, -4.173, -46.313, -9.832, 85.370 ], "C_alpha": [ 10.779, 3.025, -1.460 ] }, { "index": 379, "bpaa": "GU-arg", "z_directions": "-", "nt1": "///A/1779", "nt2": "///A/1814", "aa": "///C/221", "trs_dist": -10.525, "rot_dist": 57.028, "six_params": [ 7.207, -5.400, -5.446, -52.294, -16.273, 16.553 ], "C_alpha": [ 8.630, -5.826, -1.476 ] }, { "index": 380, "bpaa": "AU-lys", "z_directions": "+", "nt1": "///A/1781", "nt2": "///A/1812", "aa": "///C/254", "trs_dist": 10.147, "rot_dist": 171.489, "six_params": [ -2.841, 2.517, 9.410, -50.508, -29.282, 170.248 ], "C_alpha": [ -6.496, -4.366, 6.450 ] }, { "index": 381, "bpaa": "GU-gln", "z_directions": "+", "nt1": "///A/1786", "nt2": "///A/1805", "aa": "///C/153", "trs_dist": 5.360, "rot_dist": -179.325, "six_params": [ 5.208, 1.211, 0.378, -1.359, -69.018, -179.181 ], "C_alpha": [ 1.275, -4.075, 3.256 ] }, { "index": 382, "bpaa": "GU-ile", "z_directions": "+", "nt1": "///A/1786", "nt2": "///A/1805", "aa": "///C/154", "trs_dist": 4.298, "rot_dist": 155.334, "six_params": [ -0.322, -0.828, 4.205, 34.744, 10.767, 154.015 ], "C_alpha": [ 2.001, -0.393, 3.772 ] }, { "index": 383, "bpaa": "GU-ala", "z_directions": "+", "nt1": "///A/1786", "nt2": "///A/1805", "aa": "///C/155", "trs_dist": 6.695, "rot_dist": 117.262, "six_params": [ 5.530, -1.420, 3.497, 50.648, -31.024, 106.367 ], "C_alpha": [ 5.170, 1.759, 3.887 ] }, { "index": 384, "bpaa": "GU-arg", "z_directions": "-", "nt1": "///A/1786", "nt2": "///A/1805", "aa": "///C/156", "trs_dist": 8.299, "rot_dist": 70.974, "six_params": [ 6.388, -4.865, 2.100, 6.852, -17.063, 68.854 ], "C_alpha": [ 7.794, -0.709, 2.728 ] }, { "index": 385, "bpaa": "GU-leu", "z_directions": "-", "nt1": "///A/1786", "nt2": "///A/1805", "aa": "///C/176", "trs_dist": 9.474, "rot_dist": 78.172, "six_params": [ 4.409, 8.315, 1.089, 47.845, -30.251, 56.329 ], "C_alpha": [ -0.160, 7.775, 5.403 ] }, { "index": 386, "bpaa": "GU-arg", "z_directions": "-", "nt1": "///A/1786", "nt2": "///A/1805", "aa": "///C/177", "trs_dist": 10.017, "rot_dist": 145.265, "six_params": [ 8.940, 0.954, 4.417, 25.495, 13.698, 144.089 ], "C_alpha": [ 2.832, 8.981, 3.422 ] }, { "index": 387, "bpaa": "GU-ser", "z_directions": "+", "nt1": "///A/1786", "nt2": "///A/1805", "aa": "///C/178", "trs_dist": 10.050, "rot_dist": -151.679, "six_params": [ -9.171, 3.667, 1.858, 39.687, -30.610, -148.665 ], "C_alpha": [ 0.560, 10.021, 0.544 ] }, { "index": 388, "bpaa": "GU-glu", "z_directions": "+", "nt1": "///A/1786", "nt2": "///A/1805", "aa": "///C/180", "trs_dist": 11.420, "rot_dist": -101.469, "six_params": [ -10.555, 3.890, -1.968, 17.813, 48.578, -90.599 ], "C_alpha": [ -4.556, 9.988, 3.127 ] }, { "index": 389, "bpaa": "AU-asn", "z_directions": "+", "nt1": "///A/1792", "nt2": "///A/1799", "aa": "///C/44", "trs_dist": -7.907, "rot_dist": 40.114, "six_params": [ -7.704, -1.218, 1.298, -7.796, -30.473, 25.216 ], "C_alpha": [ -7.337, -2.860, -0.679 ] }, { "index": 390, "bpaa": "AU-thr", "z_directions": "-", "nt1": "///A/1792", "nt2": "///A/1799", "aa": "///C/50", "trs_dist": -7.730, "rot_dist": 128.912, "six_params": [ 0.719, 7.349, -2.286, 1.488, 5.928, 128.834 ], "C_alpha": [ -6.389, 3.726, -2.221 ] }, { "index": 391, "bpaa": "GC-asn", "z_directions": "-", "nt1": "///A/1798", "nt2": "///A/1793", "aa": "///C/44", "trs_dist": 9.139, "rot_dist": -175.633, "six_params": [ 2.590, -8.575, 1.815, -29.322, -15.760, -175.442 ], "C_alpha": [ -7.698, -2.485, 4.241 ] }, { "index": 392, "bpaa": "GC-asn", "z_directions": "-", "nt1": "///A/1798", "nt2": "///A/1793", "aa": "///C/45", "trs_dist": 9.850, "rot_dist": -99.543, "six_params": [ -5.290, -7.285, 3.996, 9.619, -34.760, -94.437 ], "C_alpha": [ -9.677, -0.599, 1.609 ] }, { "index": 393, "bpaa": "GC-asn", "z_directions": "+", "nt1": "///A/1798", "nt2": "///A/1793", "aa": "///C/46", "trs_dist": -9.955, "rot_dist": -55.589, "six_params": [ -7.898, -5.991, 0.921, 44.343, 8.148, -33.406 ], "C_alpha": [ -9.282, -3.472, -0.855 ] }, { "index": 394, "bpaa": "GC-thr", "z_directions": "+", "nt1": "///A/1800", "nt2": "///A/1791", "aa": "///C/50", "trs_dist": -7.743, "rot_dist": 24.467, "six_params": [ -6.590, 2.939, -2.809, -10.180, -13.686, 17.607 ], "C_alpha": [ -6.517, 1.665, -3.825 ] }, { "index": 395, "bpaa": "GC-thr", "z_directions": "+", "nt1": "///A/1800", "nt2": "///A/1791", "aa": "///C/51", "trs_dist": -7.901, "rot_dist": -86.996, "six_params": [ -6.893, -0.702, 3.796, -59.564, -62.426, -12.395 ], "C_alpha": [ -7.805, 1.094, -0.287 ] }, { "index": 396, "bpaa": "AC-ser", "z_directions": "+", "nt1": "///A/1806", "nt2": "///A/1787", "aa": "///C/178", "trs_dist": 6.966, "rot_dist": -109.421, "six_params": [ -5.917, 2.057, 3.048, 70.209, -11.210, -89.523 ], "C_alpha": [ -4.350, 4.461, 3.121 ] }, { "index": 397, "bpaa": "AU-arg", "z_directions": "+", "nt1": "///A/1808", "nt2": "///A/1785", "aa": "///C/272", "trs_dist": -11.463, "rot_dist": 129.363, "six_params": [ -5.098, -9.385, -4.162, 27.194, -26.418, 126.234 ], "C_alpha": [ 5.452, -6.986, -7.274 ] }, { "index": 398, "bpaa": "GC-thr", "z_directions": "+", "nt1": "///A/1811", "nt2": "///A/1782", "aa": "///C/253", "trs_dist": -8.449, "rot_dist": 93.981, "six_params": [ -6.478, 5.202, -1.536, 56.850, -55.606, 54.915 ], "C_alpha": [ -7.813, 2.739, -1.696 ] }, { "index": 399, "bpaa": "GC-lys", "z_directions": "-", "nt1": "///A/1811", "nt2": "///A/1782", "aa": "///C/254", "trs_dist": -8.390, "rot_dist": 74.309, "six_params": [ -5.743, 1.055, -6.025, 16.446, 63.108, 37.779 ], "C_alpha": [ -8.098, -1.050, -1.928 ] }, { "index": 400, "bpaa": "AU-arg", "z_directions": "+", "nt1": "///A/1816", "nt2": "///A/1683", "aa": "///C/14", "trs_dist": -9.948, "rot_dist": 60.514, "six_params": [ -9.624, 1.298, -2.156, -60.008, 0.247, 8.203 ], "C_alpha": [ -9.602, -0.630, -2.493 ] }, { "index": 401, "bpaa": "AU-phe", "z_directions": "-", "nt1": "///A/1816", "nt2": "///A/1683", "aa": "///C/15", "trs_dist": 10.911, "rot_dist": -136.832, "six_params": [ -5.364, -8.734, -3.741, -9.856, 58.496, -129.909 ], "C_alpha": [ -10.734, 1.964, 0.071 ] }, { "index": 402, "bpaa": "AU-his", "z_directions": "-", "nt1": "///A/1888", "nt2": "///A/1828", "aa": "///C/244", "trs_dist": -9.567, "rot_dist": 146.417, "six_params": [ -1.128, 8.045, -5.053, 50.963, 1.063, 142.670 ], "C_alpha": [ -9.295, 1.918, -1.098 ] }, { "index": 403, "bpaa": "AA-ala", "z_directions": "+", "nt1": "///A/1964", "nt2": "///A/1760", "aa": "///C/11", "trs_dist": 5.880, "rot_dist": 122.920, "six_params": [ -4.272, -1.429, 3.779, 75.536, 2.892, 105.597 ], "C_alpha": [ 0.238, -5.453, 2.216 ] }, { "index": 404, "bpaa": "AA-arg", "z_directions": "-", "nt1": "///A/1964", "nt2": "///A/1760", "aa": "///C/14", "trs_dist": -7.657, "rot_dist": -115.775, "six_params": [ 4.377, -5.824, -2.359, 60.311, -34.811, -99.293 ], "C_alpha": [ 0.230, -6.764, -3.568 ] }, { "index": 405, "bpaa": "GC-tyr", "z_directions": "+", "nt1": "///A/1979", "nt2": "///A/1983", "aa": "///K/32", "trs_dist": -12.717, "rot_dist": 125.231, "six_params": [ -2.406, -12.151, 2.878, 68.824, -7.373, 112.048 ], "C_alpha": [ 8.307, -8.424, -4.631 ] }, { "index": 406, "bpaa": "AU-asp", "z_directions": "-", "nt1": "///A/1996", "nt2": "///A/1638", "aa": "///N/106", "trs_dist": -7.634, "rot_dist": 137.474, "six_params": [ -1.025, 5.345, -5.354, 46.461, -30.729, 131.570 ], "C_alpha": [ -6.371, 2.982, -2.918 ] }, { "index": 407, "bpaa": "AU-arg", "z_directions": "+", "nt1": "///A/2000", "nt2": "///A/2600", "aa": "///S/88", "trs_dist": -10.758, "rot_dist": 97.695, "six_params": [ -8.933, -5.453, 2.493, 41.414, -6.837, 90.369 ], "C_alpha": [ -2.159, -10.518, -0.108 ] }, { "index": 408, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///A/2005", "nt2": "///A/522", "aa": "///Q/28", "trs_dist": 12.482, "rot_dist": -96.061, "six_params": [ -7.882, -4.370, 8.636, 58.878, -35.379, -71.819 ], "C_alpha": [ -12.171, -0.292, 2.740 ] }, { "index": 409, "bpaa": "AG-asn", "z_directions": "+", "nt1": "///A/2006", "nt2": "///A/2022", "aa": "///2/6", "trs_dist": 8.951, "rot_dist": -143.844, "six_params": [ -3.656, 7.501, 3.239, 8.373, -7.579, -143.662 ], "C_alpha": [ 5.670, 5.938, 3.514 ] }, { "index": 410, "bpaa": "AU-asn", "z_directions": "+", "nt1": "///A/2007", "nt2": "///A/2021", "aa": "///2/6", "trs_dist": 8.330, "rot_dist": 151.147, "six_params": [ 3.280, -7.519, 1.450, -12.267, 5.045, 150.948 ], "C_alpha": [ 7.925, 1.420, 2.082 ] }, { "index": 411, "bpaa": "AU-lys", "z_directions": "+", "nt1": "///A/2017", "nt2": "///A/558", "aa": "///R/81", "trs_dist": 12.153, "rot_dist": 85.379, "six_params": [ 8.205, -3.976, 8.036, 16.600, 64.979, 56.280 ], "C_alpha": [ 11.980, 1.078, 1.783 ] }, { "index": 412, "bpaa": "GC-phe", "z_directions": "+", "nt1": "///A/2035", "nt2": "///A/2607", "aa": "///D/118", "trs_dist": -11.661, "rot_dist": 66.326, "six_params": [ -10.234, 5.497, 1.016, -35.030, -30.680, 48.620 ], "C_alpha": [ -11.104, 0.603, -3.365 ] }, { "index": 413, "bpaa": "GC-ser", "z_directions": "-", "nt1": "///A/2035", "nt2": "///A/2607", "aa": "///D/162", "trs_dist": 9.155, "rot_dist": -104.247, "six_params": [ -2.979, -5.930, 6.308, 67.014, -13.172, -84.219 ], "C_alpha": [ -8.137, -3.859, 1.636 ] }, { "index": 414, "bpaa": "GC-met", "z_directions": "-", "nt1": "///A/2036", "nt2": "///A/2606", "aa": "///D/161", "trs_dist": -9.801, "rot_dist": -178.096, "six_params": [ 1.364, -9.699, -0.355, 15.326, 10.641, -178.070 ], "C_alpha": [ -9.521, -1.423, -1.758 ] }, { "index": 415, "bpaa": "AU-gly", "z_directions": "-", "nt1": "///A/2039", "nt2": "///A/2604", "aa": "///D/153", "trs_dist": -8.408, "rot_dist": 74.380, "six_params": [ -5.017, 6.456, 1.960, -42.538, 12.190, 61.376 ], "C_alpha": [ -7.699, 3.358, -0.005 ] }, { "index": 416, "bpaa": "AU-arg", "z_directions": "-", "nt1": "///A/2039", "nt2": "///A/2604", "aa": "///D/154", "trs_dist": -6.526, "rot_dist": 81.872, "six_params": [ -3.114, 3.930, -4.176, 34.552, -1.360, 75.406 ], "C_alpha": [ -5.478, 2.059, -2.860 ] }, { "index": 417, "bpaa": "AU-val", "z_directions": "-", "nt1": "///A/2039", "nt2": "///A/2604", "aa": "///D/155", "trs_dist": -7.522, "rot_dist": 175.675, "six_params": [ 5.544, 3.308, -3.860, 5.785, 54.171, 175.135 ], "C_alpha": [ -3.401, 3.376, -5.795 ] }, { "index": 418, "bpaa": "GC-gly", "z_directions": "-", "nt1": "///A/2040", "nt2": "///A/2603", "aa": "///D/153", "trs_dist": -10.670, "rot_dist": 54.362, "six_params": [ -1.399, 10.394, -1.964, -45.993, 15.730, 25.117 ], "C_alpha": [ -3.802, 8.204, -5.654 ] }, { "index": 419, "bpaa": "AU-ala", "z_directions": "-", "nt1": "///A/2041", "nt2": "///A/2602", "aa": "///2/2", "trs_dist": 7.018, "rot_dist": -108.908, "six_params": [ 5.114, -1.109, 4.677, -53.139, 40.570, -91.692 ], "C_alpha": [ 4.957, -4.168, 2.675 ] }, { "index": 420, "bpaa": "AU-val", "z_directions": "-", "nt1": "///A/2041", "nt2": "///A/2602", "aa": "///2/3", "trs_dist": 6.667, "rot_dist": -98.235, "six_params": [ 0.623, -0.850, 6.583, 43.927, 65.155, -64.512 ], "C_alpha": [ 1.661, -4.665, 4.475 ] }, { "index": 421, "bpaa": "AU-gln", "z_directions": "+", "nt1": "///A/2041", "nt2": "///A/2602", "aa": "///2/4", "trs_dist": 5.432, "rot_dist": -138.565, "six_params": [ 3.444, -2.790, 3.140, 12.051, -16.743, -137.853 ], "C_alpha": [ -1.856, -3.902, 3.293 ] }, { "index": 422, "bpaa": "AU-gln", "z_directions": "-", "nt1": "///A/2041", "nt2": "///A/2602", "aa": "///2/5", "trs_dist": 6.125, "rot_dist": -120.239, "six_params": [ -2.284, -5.389, 1.806, -56.720, 27.507, -108.476 ], "C_alpha": [ -3.931, -1.000, 4.576 ] }, { "index": 423, "bpaa": "GC-ala", "z_directions": "-", "nt1": "///A/2043", "nt2": "///A/2599", "aa": "///2/2", "trs_dist": -7.028, "rot_dist": -139.492, "six_params": [ 0.364, -5.237, -4.673, -25.560, 60.680, -131.288 ], "C_alpha": [ -6.278, -0.939, -3.002 ] }, { "index": 424, "bpaa": "AU-asn", "z_directions": "+", "nt1": "///A/2077", "nt2": "///A/2216", "aa": "///X/32", "trs_dist": -8.310, "rot_dist": 84.415, "six_params": [ -7.530, 3.414, 0.834, -57.559, -36.896, 52.875 ], "C_alpha": [ -7.615, -0.673, -3.200 ] }, { "index": 425, "bpaa": "AU-gln", "z_directions": "+", "nt1": "///A/2077", "nt2": "///A/2216", "aa": "///X/34", "trs_dist": 9.225, "rot_dist": 60.936, "six_params": [ -7.327, -2.272, 5.123, -46.601, -30.406, 25.900 ], "C_alpha": [ -8.170, -2.358, 3.542 ] }, { "index": 426, "bpaa": "GC-gln", "z_directions": "-", "nt1": "///A/2215", "nt2": "///A/2078", "aa": "///X/34", "trs_dist": 9.727, "rot_dist": -164.681, "six_params": [ 2.669, -9.244, -1.426, -30.681, -51.984, -162.261 ], "C_alpha": [ -8.622, -3.849, 2.290 ] }, { "index": 427, "bpaa": "GC-asn", "z_directions": "-", "nt1": "///A/2217", "nt2": "///A/2076", "aa": "///X/32", "trs_dist": -8.758, "rot_dist": 105.622, "six_params": [ 1.871, 7.363, -4.358, 37.191, 30.677, 97.066 ], "C_alpha": [ -5.645, 6.316, -2.146 ] }, { "index": 428, "bpaa": "GC-lys", "z_directions": "-", "nt1": "///A/2242", "nt2": "///A/2262", "aa": "///M/85", "trs_dist": -7.979, "rot_dist": -133.518, "six_params": [ 2.319, -4.091, -6.446, -77.617, 41.677, -113.402 ], "C_alpha": [ -5.917, -4.510, -2.895 ] }, { "index": 429, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///A/2242", "nt2": "///A/2262", "aa": "///W/11", "trs_dist": 11.095, "rot_dist": 30.639, "six_params": [ -9.063, -0.973, 6.325, 11.311, 13.403, 25.222 ], "C_alpha": [ -7.704, -3.404, 7.191 ] }, { "index": 430, "bpaa": "AU-asp", "z_directions": "-", "nt1": "///A/2261", "nt2": "///A/2252", "aa": "///W/15", "trs_dist": 9.378, "rot_dist": 60.989, "six_params": [ 9.345, 0.464, 0.637, 14.307, -56.815, 17.751 ], "C_alpha": [ 7.791, 1.302, 5.022 ] }, { "index": 431, "bpaa": "GC-met", "z_directions": "-", "nt1": "///A/2263", "nt2": "///A/2251", "aa": "///M/13", "trs_dist": -12.033, "rot_dist": 159.878, "six_params": [ -0.610, 8.692, -8.298, 58.023, 48.783, 154.418 ], "C_alpha": [ -11.813, -0.325, -2.213 ] }, { "index": 432, "bpaa": "GC-asp", "z_directions": "-", "nt1": "///A/2263", "nt2": "///A/2251", "aa": "///W/15", "trs_dist": 7.146, "rot_dist": 69.500, "six_params": [ 6.868, -0.880, -1.764, 11.464, -67.765, 11.026 ], "C_alpha": [ 6.764, -0.274, 2.260 ] }, { "index": 433, "bpaa": "GC-asn", "z_directions": "-", "nt1": "///A/2264", "nt2": "///A/2250", "aa": "///W/12", "trs_dist": 7.384, "rot_dist": 18.149, "six_params": [ 4.610, 5.113, 2.669, 13.955, 2.244, 11.413 ], "C_alpha": [ 4.155, 5.193, 3.166 ] }, { "index": 434, "bpaa": "GC-gly", "z_directions": "+", "nt1": "///A/2264", "nt2": "///A/2250", "aa": "///W/13", "trs_dist": 7.438, "rot_dist": 52.795, "six_params": [ 6.736, 3.152, 0.127, 50.371, 12.663, 9.820 ], "C_alpha": [ 6.513, 3.535, 0.722 ] }, { "index": 435, "bpaa": "GC-asp", "z_directions": "-", "nt1": "///A/2264", "nt2": "///A/2250", "aa": "///W/15", "trs_dist": -6.830, "rot_dist": -80.845, "six_params": [ 4.893, -1.071, -4.642, -14.170, -76.852, -22.601 ], "C_alpha": [ 6.258, -2.692, -0.472 ] }, { "index": 436, "bpaa": "AU-asn", "z_directions": "-", "nt1": "///A/2265", "nt2": "///A/2249", "aa": "///W/12", "trs_dist": 8.334, "rot_dist": -17.289, "six_params": [ 5.074, 6.575, -0.688, 10.875, -12.324, -5.384 ], "C_alpha": [ 5.375, 6.339, 0.467 ] }, { "index": 437, "bpaa": "AU-arg", "z_directions": "-", "nt1": "///A/2265", "nt2": "///A/2249", "aa": "///W/14", "trs_dist": -7.251, "rot_dist": -73.934, "six_params": [ 5.798, 1.145, 4.200, -0.729, 72.754, -14.152 ], "C_alpha": [ 7.199, 0.294, -0.083 ] }, { "index": 438, "bpaa": "AU-asp", "z_directions": "+", "nt1": "///A/2265", "nt2": "///A/2249", "aa": "///W/15", "trs_dist": -6.513, "rot_dist": -94.858, "six_params": [ 6.143, -0.374, 2.134, 34.593, 83.050, -33.946 ], "C_alpha": [ 5.610, -2.040, -2.626 ] }, { "index": 439, "bpaa": "AU-ser", "z_directions": "-", "nt1": "///A/2265", "nt2": "///A/2249", "aa": "///W/16", "trs_dist": -8.650, "rot_dist": 38.891, "six_params": [ 4.357, -7.023, -2.554, -12.323, 16.857, 32.994 ], "C_alpha": [ 5.885, -5.871, -2.393 ] }, { "index": 440, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/2266", "nt2": "///A/2248", "aa": "///W/14", "trs_dist": -6.342, "rot_dist": -72.623, "six_params": [ 6.147, 1.292, 0.877, 14.254, 61.482, -37.954 ], "C_alpha": [ 5.881, -0.533, -2.260 ] }, { "index": 441, "bpaa": "GC-asp", "z_directions": "+", "nt1": "///A/2266", "nt2": "///A/2248", "aa": "///W/15", "trs_dist": -6.706, "rot_dist": -95.456, "six_params": [ 6.332, -1.710, -1.399, 51.577, 64.695, -52.644 ], "C_alpha": [ 3.879, -2.154, -5.053 ] }, { "index": 442, "bpaa": "GC-ser", "z_directions": "-", "nt1": "///A/2266", "nt2": "///A/2248", "aa": "///W/16", "trs_dist": -7.880, "rot_dist": 17.670, "six_params": [ 2.611, -5.306, -5.209, -12.629, 10.370, 6.746 ], "C_alpha": [ 2.480, -5.730, -4.806 ] }, { "index": 443, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/2267", "nt2": "///A/2247", "aa": "///W/14", "trs_dist": -7.131, "rot_dist": -82.226, "six_params": [ 6.556, 0.500, -2.762, 25.633, 40.612, -68.864 ], "C_alpha": [ 5.069, -1.800, -4.706 ] }, { "index": 444, "bpaa": "GC-ser", "z_directions": "+", "nt1": "///A/2290", "nt2": "///A/2300", "aa": "///F/129", "trs_dist": 8.918, "rot_dist": -44.081, "six_params": [ -8.708, 1.656, 0.971, -43.086, 5.137, -7.961 ], "C_alpha": [ -8.504, 2.558, 0.668 ] }, { "index": 445, "bpaa": "GC-thr", "z_directions": "-", "nt1": "///A/2290", "nt2": "///A/2300", "aa": "///F/155", "trs_dist": -9.701, "rot_dist": 163.010, "six_params": [ -1.915, 8.827, -3.540, 23.025, 43.439, 161.303 ], "C_alpha": [ -9.578, -1.204, -0.796 ] }, { "index": 446, "bpaa": "GU-gly", "z_directions": "+", "nt1": "///A/2291", "nt2": "///A/2299", "aa": "///F/39", "trs_dist": 8.043, "rot_dist": 38.607, "six_params": [ -7.515, -0.695, 2.779, -24.254, -16.459, 25.407 ], "C_alpha": [ -7.627, -1.925, 1.775 ] }, { "index": 447, "bpaa": "GC-asp", "z_directions": "+", "nt1": "///A/2301", "nt2": "///A/2289", "aa": "///F/123", "trs_dist": -7.875, "rot_dist": 73.049, "six_params": [ -7.515, 0.057, 2.351, -32.340, -51.192, 42.969 ], "C_alpha": [ -7.311, -2.633, -1.182 ] }, { "index": 448, "bpaa": "AU-arg", "z_directions": "+", "nt1": "///A/2316", "nt2": "///A/2373", "aa": "///W/41", "trs_dist": 8.075, "rot_dist": 98.204, "six_params": [ -7.080, 3.816, 0.721, -1.690, 37.250, 92.585 ], "C_alpha": [ -7.256, -2.039, 2.850 ] }, { "index": 449, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///A/2317", "nt2": "///A/2372", "aa": "///W/41", "trs_dist": -8.536, "rot_dist": 62.539, "six_params": [ -4.303, 6.546, -3.391, 2.237, 21.715, 58.970 ], "C_alpha": [ -7.461, 3.354, -2.428 ] }, { "index": 450, "bpaa": "GC-gly", "z_directions": "+", "nt1": "///A/2317", "nt2": "///A/2372", "aa": "///W/42", "trs_dist": 6.905, "rot_dist": 58.244, "six_params": [ -6.726, 1.026, 1.176, -58.005, 2.464, 4.886 ], "C_alpha": [ -6.784, 1.241, 0.673 ] }, { "index": 451, "bpaa": "AU-arg", "z_directions": "+", "nt1": "///A/2322", "nt2": "///A/2283", "aa": "///O/10", "trs_dist": -13.091, "rot_dist": -111.584, "six_params": [ 2.710, 12.722, -1.482, -14.539, 25.670, -108.908 ], "C_alpha": [ 11.322, 5.464, -3.626 ] }, { "index": 452, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///A/2324", "nt2": "///A/2282", "aa": "///O/10", "trs_dist": -11.484, "rot_dist": 173.753, "six_params": [ -7.529, -6.725, -5.474, -4.999, -26.064, 173.581 ], "C_alpha": [ 6.631, -6.513, -6.731 ] }, { "index": 453, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///A/2336", "nt2": "///A/2355", "aa": "///5/41", "trs_dist": 12.254, "rot_dist": -103.305, "six_params": [ -7.294, 9.725, 1.545, 23.290, 50.425, -90.953 ], "C_alpha": [ 2.485, 10.179, 6.355 ] }, { "index": 454, "bpaa": "GC-gly", "z_directions": "+", "nt1": "///A/2340", "nt2": "///A/2351", "aa": "///W/34", "trs_dist": -7.411, "rot_dist": 26.364, "six_params": [ -6.310, 2.790, -2.705, -10.863, 24.021, 0.162 ], "C_alpha": [ -6.775, 2.593, -1.556 ] }, { "index": 455, "bpaa": "GC-ile", "z_directions": "+", "nt1": "///A/2340", "nt2": "///A/2351", "aa": "///W/36", "trs_dist": 8.777, "rot_dist": -42.517, "six_params": [ -6.084, -3.944, 4.946, -5.852, -31.066, -28.803 ], "C_alpha": [ -7.899, -1.835, 3.327 ] }, { "index": 456, "bpaa": "AU-ile", "z_directions": "+", "nt1": "///A/2341", "nt2": "///A/2350", "aa": "///W/36", "trs_dist": -9.488, "rot_dist": -70.657, "six_params": [ -9.369, -0.454, 1.428, -17.036, -36.013, -59.599 ], "C_alpha": [ -8.345, 4.234, -1.476 ] }, { "index": 457, "bpaa": "AU-arg", "z_directions": "+", "nt1": "///A/2341", "nt2": "///A/2350", "aa": "///W/39", "trs_dist": 12.452, "rot_dist": -57.630, "six_params": [ -10.270, -0.809, 6.995, 16.376, -55.254, -0.111 ], "C_alpha": [ -12.264, -1.422, 1.266 ] }, { "index": 458, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/2349", "nt2": "///A/2342", "aa": "///W/39", "trs_dist": 12.634, "rot_dist": -148.653, "six_params": [ 3.865, -11.474, -3.610, -60.984, -0.426, -143.458 ], "C_alpha": [ -9.889, -7.302, 2.730 ] }, { "index": 459, "bpaa": "GA-ala", "z_directions": "-", "nt1": "///A/2352", "nt2": "///A/2339", "aa": "///W/33", "trs_dist": -9.362, "rot_dist": 132.866, "six_params": [ -0.816, 8.613, 3.577, -69.366, -19.882, 120.700 ], "C_alpha": [ -8.345, 3.659, -2.116 ] }, { "index": 460, "bpaa": "GA-gly", "z_directions": "-", "nt1": "///A/2352", "nt2": "///A/2339", "aa": "///W/34", "trs_dist": -6.700, "rot_dist": 130.712, "six_params": [ 1.958, 6.299, -1.173, -23.741, 22.459, 128.489 ], "C_alpha": [ -4.637, 3.963, -2.822 ] }, { "index": 461, "bpaa": "GA-lys", "z_directions": "-", "nt1": "///A/2352", "nt2": "///A/2339", "aa": "///5/38", "trs_dist": 11.849, "rot_dist": -73.314, "six_params": [ 11.008, 4.352, -0.533, 18.900, -33.066, -63.866 ], "C_alpha": [ 11.175, -2.108, 3.316 ] }, { "index": 462, "bpaa": "GA-gln", "z_directions": "-", "nt1": "///A/2352", "nt2": "///A/2339", "aa": "///5/42", "trs_dist": 12.616, "rot_dist": -80.172, "six_params": [ 11.581, -2.549, -4.305, 30.436, -49.193, -58.119 ], "C_alpha": [ 9.915, -7.799, 0.338 ] }, { "index": 463, "bpaa": "AG-lys", "z_directions": "-", "nt1": "///A/2353", "nt2": "///A/2338", "aa": "///5/38", "trs_dist": -10.759, "rot_dist": -53.330, "six_params": [ 7.890, 6.215, -3.857, 24.400, -29.980, -37.469 ], "C_alpha": [ 10.131, 3.602, -0.319 ] }, { "index": 464, "bpaa": "AG-arg", "z_directions": "-", "nt1": "///A/2353", "nt2": "///A/2338", "aa": "///5/41", "trs_dist": 13.126, "rot_dist": -52.080, "six_params": [ 11.673, -0.274, 5.996, 5.149, 50.777, -10.734 ], "C_alpha": [ 13.014, -1.638, 0.392 ] }, { "index": 465, "bpaa": "AG-gln", "z_directions": "-", "nt1": "///A/2353", "nt2": "///A/2338", "aa": "///5/42", "trs_dist": -12.113, "rot_dist": -65.373, "six_params": [ 9.713, -0.799, -7.193, 39.202, -42.992, -31.210 ], "C_alpha": [ 11.521, -2.174, -3.066 ] }, { "index": 466, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/2354", "nt2": "///A/2337", "aa": "///5/41", "trs_dist": -12.704, "rot_dist": -89.121, "six_params": [ 10.137, -7.294, 2.333, 34.459, 39.167, -75.009 ], "C_alpha": [ 3.559, -11.717, -3.374 ] }, { "index": 467, "bpaa": "AU-tyr", "z_directions": "-", "nt1": "///A/2356", "nt2": "///A/2335", "aa": "///3/35", "trs_dist": 11.107, "rot_dist": -126.606, "six_params": [ 7.051, -7.885, 3.389, -35.653, -25.043, -122.129 ], "C_alpha": [ -2.611, -8.174, 7.042 ] }, { "index": 468, "bpaa": "GC-tyr", "z_directions": "-", "nt1": "///A/2357", "nt2": "///A/2334", "aa": "///3/35", "trs_dist": 8.541, "rot_dist": -156.786, "six_params": [ 1.916, -8.295, -0.679, -28.817, -20.877, -155.603 ], "C_alpha": [ -7.589, -3.494, 1.747 ] }, { "index": 469, "bpaa": "GC-his", "z_directions": "+", "nt1": "///A/2357", "nt2": "///A/2334", "aa": "///3/42", "trs_dist": 10.409, "rot_dist": -38.350, "six_params": [ -6.670, -3.509, 7.180, -8.211, -32.119, -19.555 ], "C_alpha": [ -8.822, -1.585, 5.287 ] }, { "index": 470, "bpaa": "GG-his", "z_directions": "+", "nt1": "///A/2358", "nt2": "///A/2332", "aa": "///3/42", "trs_dist": -12.912, "rot_dist": -110.495, "six_params": [ -11.048, 4.802, 4.646, -34.596, -31.799, -103.139 ], "C_alpha": [ -2.961, 12.564, -0.126 ] }, { "index": 471, "bpaa": "GA-met", "z_directions": "-", "nt1": "///A/2362", "nt2": "///A/2365", "aa": "///O/19", "trs_dist": -10.884, "rot_dist": -87.450, "six_params": [ -6.711, -2.073, -8.314, 9.710, 84.795, -21.206 ], "C_alpha": [ -10.737, 0.361, -1.751 ] }, { "index": 472, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/2370", "nt2": "///A/2272", "aa": "///3/2", "trs_dist": -11.382, "rot_dist": -134.979, "six_params": [ 9.780, -1.680, -5.573, 86.097, -25.059, -114.650 ], "C_alpha": [ 7.308, -8.118, -3.156 ] }, { "index": 473, "bpaa": "AC-gln", "z_directions": "-", "nt1": "///A/2379", "nt2": "///A/2411", "aa": "///L/55", "trs_dist": -8.860, "rot_dist": -153.901, "six_params": [ -0.142, -6.470, -6.051, 25.331, 78.589, -145.026 ], "C_alpha": [ -6.181, 2.636, -5.752 ] }, { "index": 474, "bpaa": "AC-arg", "z_directions": "-", "nt1": "///A/2379", "nt2": "///A/2411", "aa": "///L/59", "trs_dist": 9.390, "rot_dist": 82.834, "six_params": [ -3.443, 8.263, 2.837, -16.816, -38.952, 72.890 ], "C_alpha": [ -8.257, 4.461, 0.305 ] }, { "index": 475, "bpaa": "GC-lys", "z_directions": "+", "nt1": "///A/2383", "nt2": "///A/2407", "aa": "///3/51", "trs_dist": 11.939, "rot_dist": 169.031, "six_params": [ -6.550, 4.289, 9.013, -40.728, -18.697, 168.133 ], "C_alpha": [ -7.730, -7.024, 5.810 ] }, { "index": 476, "bpaa": "GC-his", "z_directions": "-", "nt1": "///A/2383", "nt2": "///A/2407", "aa": "///5/30", "trs_dist": -6.283, "rot_dist": -78.636, "six_params": [ 4.421, -1.447, -4.223, -15.559, -28.930, -72.479 ], "C_alpha": [ 3.181, -4.704, -2.781 ] }, { "index": 477, "bpaa": "GU-leu", "z_directions": "+", "nt1": "///A/2384", "nt2": "///A/2406", "aa": "///5/32", "trs_dist": -10.556, "rot_dist": 73.583, "six_params": [ -4.945, -8.496, -3.848, 0.087, -69.731, 25.146 ], "C_alpha": [ 0.020, -8.686, -5.997 ] }, { "index": 478, "bpaa": "GC-phe", "z_directions": "-", "nt1": "///A/2401", "nt2": "///A/2390", "aa": "///L/66", "trs_dist": 10.328, "rot_dist": -151.723, "six_params": [ -2.631, -9.577, 2.834, -27.604, -62.865, -145.590 ], "C_alpha": [ -9.700, 1.532, 3.141 ] }, { "index": 479, "bpaa": "AU-arg", "z_directions": "-", "nt1": "///A/2405", "nt2": "///A/2385", "aa": "///3/6", "trs_dist": 12.877, "rot_dist": 154.307, "six_params": [ -2.162, 12.326, -3.034, 53.629, 34.759, 149.617 ], "C_alpha": [ -12.314, 1.191, 3.508 ] }, { "index": 480, "bpaa": "AU-phe", "z_directions": "+", "nt1": "///A/2405", "nt2": "///A/2385", "aa": "///3/16", "trs_dist": -11.618, "rot_dist": -98.606, "six_params": [ -10.458, -2.357, -4.479, -43.383, 20.678, -88.888 ], "C_alpha": [ -10.288, 5.200, -1.394 ] }, { "index": 481, "bpaa": "GC-his", "z_directions": "+", "nt1": "///A/2408", "nt2": "///A/2382", "aa": "///5/30", "trs_dist": -6.604, "rot_dist": -148.826, "six_params": [ -1.277, 6.315, 1.452, -22.538, -21.024, -147.632 ], "C_alpha": [ 5.836, 3.144, -0.024 ] }, { "index": 482, "bpaa": "CU-his", "z_directions": "+", "nt1": "///A/2409", "nt2": "///A/2380", "aa": "///5/30", "trs_dist": -11.058, "rot_dist": 162.524, "six_params": [ 0.648, -10.319, -3.921, 12.443, 4.044, 162.409 ], "C_alpha": [ 9.798, -1.048, -5.000 ] }, { "index": 483, "bpaa": "GG-gln", "z_directions": "-", "nt1": "///A/2416", "nt2": "///A/2378", "aa": "///L/55", "trs_dist": -11.033, "rot_dist": 154.300, "six_params": [ 8.590, 6.644, -1.947, -50.020, -47.769, 148.656 ], "C_alpha": [ -3.279, 10.485, -0.946 ] }, { "index": 484, "bpaa": "AU-leu", "z_directions": "-", "nt1": "///A/2446", "nt2": "///A/2480", "aa": "///M/79", "trs_dist": -8.561, "rot_dist": 105.026, "six_params": [ -3.167, 5.863, -5.375, -34.066, 74.007, 73.134 ], "C_alpha": [ -7.676, -0.161, -3.790 ] }, { "index": 485, "bpaa": "CC-lys", "z_directions": "-", "nt1": "///A/2454", "nt2": "///A/2470", "aa": "///M/124", "trs_dist": -7.298, "rot_dist": 59.903, "six_params": [ -1.510, 2.293, -6.762, 23.181, 45.650, 32.210 ], "C_alpha": [ -4.733, 2.301, -5.069 ] }, { "index": 486, "bpaa": "GA-arg", "z_directions": "+", "nt1": "///A/2459", "nt2": "///A/2465", "aa": "///6/32", "trs_dist": 12.796, "rot_dist": 116.074, "six_params": [ -11.317, -5.718, 1.725, 80.019, 35.974, 85.509 ], "C_alpha": [ -3.464, -12.294, 0.846 ] }, { "index": 487, "bpaa": "GC-ala", "z_directions": "-", "nt1": "///A/2471", "nt2": "///A/2453", "aa": "///M/123", "trs_dist": -8.708, "rot_dist": 124.137, "six_params": [ -5.908, 6.362, 0.658, 10.576, -73.940, 107.798 ], "C_alpha": [ -8.334, -0.474, -2.485 ] }, { "index": 488, "bpaa": "GC-lys", "z_directions": "+", "nt1": "///A/2471", "nt2": "///A/2453", "aa": "///M/124", "trs_dist": -8.068, "rot_dist": 126.001, "six_params": [ -1.542, 6.962, 3.774, -73.277, -15.426, 110.250 ], "C_alpha": [ -7.365, 3.031, -1.341 ] }, { "index": 489, "bpaa": "UC-gly", "z_directions": "+", "nt1": "///A/2498", "nt2": "///A/2562", "aa": "///D/144", "trs_dist": -7.828, "rot_dist": 56.570, "six_params": [ -6.987, 3.202, -1.488, 42.755, -12.822, 35.683 ], "C_alpha": [ -7.645, 1.389, -0.972 ] }, { "index": 490, "bpaa": "UC-ser", "z_directions": "+", "nt1": "///A/2498", "nt2": "///A/2562", "aa": "///D/145", "trs_dist": 6.873, "rot_dist": -27.785, "six_params": [ -6.132, -3.092, -0.275, -18.661, 2.872, -20.477 ], "C_alpha": [ -6.570, -1.952, 0.375 ] }, { "index": 491, "bpaa": "AU-gln", "z_directions": "-", "nt1": "///A/2500", "nt2": "///A/2558", "aa": "///D/148", "trs_dist": -7.634, "rot_dist": 95.328, "six_params": [ -2.031, 2.066, -7.063, 2.559, 77.140, 60.995 ], "C_alpha": [ -6.257, -1.147, -4.203 ] }, { "index": 492, "bpaa": "GU-met", "z_directions": "-", "nt1": "///A/2513", "nt2": "///A/2524", "aa": "///6/1", "trs_dist": -9.096, "rot_dist": -110.062, "six_params": [ -8.040, -2.712, 3.276, -28.052, -76.186, -81.990 ], "C_alpha": [ -8.104, 3.708, -1.816 ] }, { "index": 493, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/2516", "nt2": "///A/2462", "aa": "///6/32", "trs_dist": 12.705, "rot_dist": 118.534, "six_params": [ 7.696, 10.103, -0.333, -42.534, -70.840, 94.252 ], "C_alpha": [ -2.278, 12.486, 0.671 ] }, { "index": 494, "bpaa": "AU-lys", "z_directions": "-", "nt1": "///A/2534", "nt2": "///A/2548", "aa": "///K/23", "trs_dist": 10.488, "rot_dist": 174.482, "six_params": [ -4.204, 9.200, -2.774, 25.448, 35.933, 174.047 ], "C_alpha": [ -9.638, -4.031, 0.708 ] }, { "index": 495, "bpaa": "AU-lys", "z_directions": "+", "nt1": "///A/2547", "nt2": "///A/2535", "aa": "///K/23", "trs_dist": 9.596, "rot_dist": 49.690, "six_params": [ -7.571, -0.368, 5.884, -22.333, -29.384, 33.869 ], "C_alpha": [ -8.585, -2.012, 3.742 ] }, { "index": 496, "bpaa": "AU-ser", "z_directions": "+", "nt1": "///A/2552", "nt2": "///A/2550", "aa": "///K/28", "trs_dist": 7.681, "rot_dist": -174.256, "six_params": [ 6.087, 2.832, 3.731, -2.812, 51.022, -173.633 ], "C_alpha": [ 3.268, -6.919, 0.684 ] }, { "index": 497, "bpaa": "AU-ser", "z_directions": "+", "nt1": "///A/2553", "nt2": "///A/2549", "aa": "///K/28", "trs_dist": -6.209, "rot_dist": 149.528, "six_params": [ -5.761, 2.138, 0.890, -19.500, -36.916, 147.330 ], "C_alpha": [ -3.623, -4.864, -1.333 ] }, { "index": 498, "bpaa": "GU-gln", "z_directions": "+", "nt1": "///A/2557", "nt2": "///A/2501", "aa": "///D/148", "trs_dist": 9.381, "rot_dist": 164.124, "six_params": [ -2.303, -2.132, 8.840, -68.426, -28.071, 160.090 ], "C_alpha": [ -3.708, -3.811, 7.714 ] }, { "index": 499, "bpaa": "GC-ser", "z_directions": "-", "nt1": "///A/2561", "nt2": "///A/2499", "aa": "///D/145", "trs_dist": 7.351, "rot_dist": -113.697, "six_params": [ 0.534, -6.362, 3.643, 6.877, -9.471, -113.304 ], "C_alpha": [ -5.350, -3.806, 3.296 ] }, { "index": 500, "bpaa": "GC-gly", "z_directions": "+", "nt1": "///A/2561", "nt2": "///A/2499", "aa": "///D/147", "trs_dist": -8.030, "rot_dist": 162.668, "six_params": [ -0.952, 7.960, -0.460, -11.615, 36.737, 161.632 ], "C_alpha": [ -7.963, 0.098, -0.894 ] }, { "index": 501, "bpaa": "GC-gln", "z_directions": "+", "nt1": "///A/2565", "nt2": "///A/2497", "aa": "///D/130", "trs_dist": -9.863, "rot_dist": 83.477, "six_params": [ -9.031, 0.111, 3.964, -38.701, -58.493, 48.518 ], "C_alpha": [ -9.157, -3.450, -1.108 ] }, { "index": 502, "bpaa": "GC-gly", "z_directions": "-", "nt1": "///A/2565", "nt2": "///A/2497", "aa": "///D/144", "trs_dist": -6.421, "rot_dist": 121.668, "six_params": [ -2.060, 5.166, -3.208, -22.471, -54.090, 112.060 ], "C_alpha": [ -3.712, 2.323, -4.701 ] }, { "index": 503, "bpaa": "GC-ser", "z_directions": "-", "nt1": "///A/2565", "nt2": "///A/2497", "aa": "///D/145", "trs_dist": -6.447, "rot_dist": 156.591, "six_params": [ 4.654, 1.986, -3.995, -18.702, 18.983, 155.933 ], "C_alpha": [ -0.400, 4.082, -4.960 ] }, { "index": 504, "bpaa": "GC-glu", "z_directions": "-", "nt1": "///A/2586", "nt2": "///A/2581", "aa": "///C/236", "trs_dist": 7.443, "rot_dist": 85.004, "six_params": [ 6.470, 1.902, 3.148, -72.801, -7.047, 46.734 ], "C_alpha": [ 4.385, 5.736, 1.784 ] }, { "index": 505, "bpaa": "AU-glu", "z_directions": "-", "nt1": "///A/2587", "nt2": "///A/2580", "aa": "///C/236", "trs_dist": -8.101, "rot_dist": 74.981, "six_params": [ 7.331, 2.981, 1.728, -74.309, 8.887, 5.015 ], "C_alpha": [ 7.200, 3.570, -0.945 ] }, { "index": 506, "bpaa": "GC-ile", "z_directions": "-", "nt1": "///A/2605", "nt2": "///A/2037", "aa": "///D/146", "trs_dist": -10.534, "rot_dist": -164.907, "six_params": [ 1.491, -10.337, -1.376, -2.025, 51.129, -163.255 ], "C_alpha": [ -10.127, -2.290, -1.708 ] }, { "index": 507, "bpaa": "GC-val", "z_directions": "+", "nt1": "///A/2605", "nt2": "///A/2037", "aa": "///D/155", "trs_dist": 8.935, "rot_dist": -67.611, "six_params": [ -8.934, -0.136, 0.049, -40.960, 0.975, -54.996 ], "C_alpha": [ -7.967, 4.020, 0.168 ] }, { "index": 508, "bpaa": "GC-met", "z_directions": "+", "nt1": "///A/2605", "nt2": "///A/2037", "aa": "///D/161", "trs_dist": 10.999, "rot_dist": 44.140, "six_params": [ -9.674, -2.738, 4.462, 7.919, 27.267, 34.151 ], "C_alpha": [ -7.078, -5.432, 6.404 ] }, { "index": 509, "bpaa": "GC-his", "z_directions": "-", "nt1": "///A/2610", "nt2": "///A/2032", "aa": "///2/19", "trs_dist": -10.415, "rot_dist": -155.550, "six_params": [ 0.694, -9.839, -3.343, -36.051, 15.605, -154.014 ], "C_alpha": [ -10.040, -2.785, -0.212 ] }, { "index": 510, "bpaa": "GC-his", "z_directions": "-", "nt1": "///A/2611", "nt2": "///A/2031", "aa": "///2/19", "trs_dist": -10.622, "rot_dist": 174.334, "six_params": [ 3.293, 7.226, -7.054, 26.775, -26.275, 174.015 ], "C_alpha": [ -8.318, 5.041, -4.286 ] }, { "index": 511, "bpaa": "AU-ala", "z_directions": "+", "nt1": "///A/2619", "nt2": "///A/2773", "aa": "///D/64", "trs_dist": 6.964, "rot_dist": 61.290, "six_params": [ -6.634, 0.765, 1.977, -4.085, -22.638, 57.202 ], "C_alpha": [ -6.433, -2.582, 0.612 ] }, { "index": 512, "bpaa": "GC-ala", "z_directions": "+", "nt1": "///A/2620", "nt2": "///A/2772", "aa": "///D/64", "trs_dist": -7.224, "rot_dist": 39.205, "six_params": [ -5.694, 3.783, -2.334, -17.826, -27.931, 21.257 ], "C_alpha": [ -5.408, 2.314, -4.181 ] }, { "index": 513, "bpaa": "GC-gln", "z_directions": "-", "nt1": "///A/2620", "nt2": "///A/2772", "aa": "///D/65", "trs_dist": -8.321, "rot_dist": -78.546, "six_params": [ -6.297, -1.724, -5.159, -11.422, 56.396, -55.949 ], "C_alpha": [ -7.981, 1.912, -1.397 ] }, { "index": 514, "bpaa": "GC-his", "z_directions": "+", "nt1": "///A/2620", "nt2": "///A/2772", "aa": "///D/68", "trs_dist": -8.801, "rot_dist": 67.181, "six_params": [ -8.495, -1.206, 1.962, -35.233, -52.957, 22.855 ], "C_alpha": [ -8.155, -2.840, -1.698 ] }, { "index": 515, "bpaa": "AU-gln", "z_directions": "-", "nt1": "///A/2621", "nt2": "///A/2771", "aa": "///D/65", "trs_dist": -10.768, "rot_dist": -87.677, "six_params": [ -4.800, 1.060, -9.581, 7.985, 39.342, -79.662 ], "C_alpha": [ -4.873, 6.224, -7.321 ] }, { "index": 516, "bpaa": "CU-phe", "z_directions": "+", "nt1": "///A/2654", "nt2": "///A/2640", "aa": "///G/109", "trs_dist": -7.821, "rot_dist": 142.347, "six_params": [ -4.650, 5.624, -2.812, 2.147, -70.986, 133.290 ], "C_alpha": [ -6.111, 0.260, -4.883 ] }, { "index": 517, "bpaa": "CU-ser", "z_directions": "+", "nt1": "///A/2654", "nt2": "///A/2640", "aa": "///G/110", "trs_dist": -5.861, "rot_dist": 56.701, "six_params": [ -5.735, -1.117, 0.464, -21.401, -51.083, 12.657 ], "C_alpha": [ -5.254, -1.835, -1.844 ] }, { "index": 518, "bpaa": "CU-his", "z_directions": "-", "nt1": "///A/2654", "nt2": "///A/2640", "aa": "///G/111", "trs_dist": -9.064, "rot_dist": -83.163, "six_params": [ -6.060, -6.497, -1.796, 30.523, 53.309, -59.068 ], "C_alpha": [ -8.794, -2.122, -0.497 ] }, { "index": 519, "bpaa": "GC-ser", "z_directions": "+", "nt1": "///A/2655", "nt2": "///A/2639", "aa": "///G/110", "trs_dist": -7.824, "rot_dist": -68.754, "six_params": [ -6.322, 3.538, -2.954, -34.454, -48.361, -36.367 ], "C_alpha": [ -3.475, 3.400, -6.130 ] }, { "index": 520, "bpaa": "AU-ala", "z_directions": "-", "nt1": "///A/2666", "nt2": "///A/2715", "aa": "///D/192", "trs_dist": 7.755, "rot_dist": -166.119, "six_params": [ -1.632, -7.568, -0.450, 1.634, 50.630, -164.635 ], "C_alpha": [ -7.718, 0.662, 0.188 ] }, { "index": 521, "bpaa": "CC-arg", "z_directions": "-", "nt1": "///A/2668", "nt2": "///A/2670", "aa": "///K/70", "trs_dist": -13.004, "rot_dist": -165.629, "six_params": [ 4.127, -12.146, -2.135, 7.225, -19.647, -165.385 ], "C_alpha": [ -11.330, -5.973, -2.156 ] }, { "index": 522, "bpaa": "GA-lys", "z_directions": "+", "nt1": "///A/2675", "nt2": "///A/2708", "aa": "///N/5", "trs_dist": 10.832, "rot_dist": 103.929, "six_params": [ -5.987, 6.152, 6.606, -76.633, -24.659, 72.332 ], "C_alpha": [ -10.434, 2.879, 0.071 ] }, { "index": 523, "bpaa": "AU-arg", "z_directions": "-", "nt1": "///A/2687", "nt2": "///A/2694", "aa": "///N/71", "trs_dist": -11.779, "rot_dist": 178.862, "six_params": [ -3.655, 10.899, -2.571, 41.465, -68.293, 178.516 ], "C_alpha": [ -11.499, -2.606, -0.349 ] }, { "index": 524, "bpaa": "GC-phe", "z_directions": "+", "nt1": "///A/2693", "nt2": "///A/2688", "aa": "///N/67", "trs_dist": 10.944, "rot_dist": 59.347, "six_params": [ -10.400, 1.933, -2.804, -30.765, 47.086, 19.761 ], "C_alpha": [ -10.878, -0.160, 1.132 ] }, { "index": 525, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///A/2693", "nt2": "///A/2688", "aa": "///N/71", "trs_dist": 11.360, "rot_dist": 88.307, "six_params": [ -9.650, 1.509, 5.802, 81.650, -22.672, 27.606 ], "C_alpha": [ -9.856, -4.453, 3.531 ] }, { "index": 526, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/2695", "nt2": "///A/2686", "aa": "///N/71", "trs_dist": -12.719, "rot_dist": 117.073, "six_params": [ 3.830, 11.289, -4.435, 17.097, 88.020, 85.216 ], "C_alpha": [ -7.896, 9.029, -4.276 ] }, { "index": 527, "bpaa": "GC-lys", "z_directions": "+", "nt1": "///A/2704", "nt2": "///A/2679", "aa": "///P/95", "trs_dist": 10.934, "rot_dist": 80.091, "six_params": [ -7.524, 6.978, 3.774, -34.633, -21.156, 70.590 ], "C_alpha": [ -10.804, 1.638, 0.104 ] }, { "index": 528, "bpaa": "GC-lys", "z_directions": "-", "nt1": "///A/2724", "nt2": "///A/2754", "aa": "///J/91", "trs_dist": -12.159, "rot_dist": 150.406, "six_params": [ -2.528, 11.380, -3.457, 13.038, 64.180, 144.647 ], "C_alpha": [ -12.154, 0.062, -0.348 ] }, { "index": 529, "bpaa": "GC-gln", "z_directions": "-", "nt1": "///A/2731", "nt2": "///A/2747", "aa": "///G/139", "trs_dist": 10.499, "rot_dist": 155.845, "six_params": [ -7.695, 6.960, 1.603, 24.798, 50.731, 152.523 ], "C_alpha": [ -7.344, -4.334, 6.125 ] }, { "index": 530, "bpaa": "GC-gln", "z_directions": "-", "nt1": "///A/2731", "nt2": "///A/2747", "aa": "///G/143", "trs_dist": 9.664, "rot_dist": 145.079, "six_params": [ -3.699, 7.995, -3.973, 53.512, 51.153, 135.856 ], "C_alpha": [ -9.462, -0.694, 1.843 ] }, { "index": 531, "bpaa": "AU-ala", "z_directions": "-", "nt1": "///A/2735", "nt2": "///A/2741", "aa": "///G/63", "trs_dist": 7.935, "rot_dist": 92.269, "six_params": [ -0.345, 7.903, -0.627, 29.392, 8.565, 88.146 ], "C_alpha": [ -5.662, 5.390, 1.421 ] }, { "index": 532, "bpaa": "AU-thr", "z_directions": "-", "nt1": "///A/2735", "nt2": "///A/2741", "aa": "///G/67", "trs_dist": -8.116, "rot_dist": 90.053, "six_params": [ 3.136, 4.671, -5.851, 65.326, -2.326, 65.774 ], "C_alpha": [ -1.139, 7.685, -2.348 ] }, { "index": 533, "bpaa": "GC-ser", "z_directions": "-", "nt1": "///A/2738", "nt2": "///A/1039", "aa": "///G/2", "trs_dist": 5.059, "rot_dist": -161.221, "six_params": [ -4.956, -1.011, 0.111, 2.486, 36.895, -160.189 ], "C_alpha": [ -1.812, 4.422, 1.653 ] }, { "index": 534, "bpaa": "AA-lys", "z_directions": "+", "nt1": "///A/2740", "nt2": "///A/2736", "aa": "///6/15", "trs_dist": -10.627, "rot_dist": -37.475, "six_params": [ -5.909, 8.667, -1.699, 10.496, -18.168, -31.227 ], "C_alpha": [ -3.033, 10.012, -1.817 ] }, { "index": 535, "bpaa": "AG-gln", "z_directions": "-", "nt1": "///A/2744", "nt2": "///A/2734", "aa": "///G/60", "trs_dist": -11.774, "rot_dist": 85.056, "six_params": [ -8.260, 5.330, -6.480, -58.922, 60.557, 10.847 ], "C_alpha": [ -11.185, 1.638, -3.321 ] }, { "index": 536, "bpaa": "AG-ala", "z_directions": "+", "nt1": "///A/2744", "nt2": "///A/2734", "aa": "///G/63", "trs_dist": -9.061, "rot_dist": 70.294, "six_params": [ -8.152, 2.922, -2.666, -8.070, -27.947, 64.710 ], "C_alpha": [ -7.552, -1.631, -4.748 ] }, { "index": 537, "bpaa": "AG-thr", "z_directions": "+", "nt1": "///A/2744", "nt2": "///A/2734", "aa": "///G/67", "trs_dist": -7.569, "rot_dist": 103.672, "six_params": [ -6.945, -1.616, 2.539, -6.287, -66.583, 84.454 ], "C_alpha": [ -4.283, -6.028, -1.603 ] }, { "index": 538, "bpaa": "AU-thr", "z_directions": "+", "nt1": "///A/2745", "nt2": "///A/2743", "aa": "///G/67", "trs_dist": -7.022, "rot_dist": 114.733, "six_params": [ -5.751, -0.993, -3.906, 2.694, -83.996, 86.916 ], "C_alpha": [ -0.610, -1.760, -6.766 ] }, { "index": 539, "bpaa": "AU-leu", "z_directions": "-", "nt1": "///A/2745", "nt2": "///A/2743", "aa": "///G/71", "trs_dist": -8.844, "rot_dist": -63.815, "six_params": [ 4.125, -4.879, -6.115, -48.693, 41.079, -3.943 ], "C_alpha": [ 1.889, -7.292, -4.632 ] }, { "index": 540, "bpaa": "GC-gln", "z_directions": "+", "nt1": "///A/2746", "nt2": "///A/2732", "aa": "///G/139", "trs_dist": -8.530, "rot_dist": 85.766, "six_params": [ -8.272, 1.795, 1.058, -39.836, -37.709, 68.714 ], "C_alpha": [ -7.553, -3.244, -2.277 ] }, { "index": 541, "bpaa": "GC-gln", "z_directions": "+", "nt1": "///A/2746", "nt2": "///A/2732", "aa": "///G/143", "trs_dist": 10.073, "rot_dist": 106.468, "six_params": [ -7.223, -2.001, 6.730, -29.965, -64.712, 85.106 ], "C_alpha": [ -6.689, -7.221, 2.140 ] }, { "index": 542, "bpaa": "GC-gln", "z_directions": "+", "nt1": "///A/2748", "nt2": "///A/2730", "aa": "///G/143", "trs_dist": -10.626, "rot_dist": 89.985, "six_params": [ -6.836, 8.059, 1.109, -59.294, -55.509, 42.636 ], "C_alpha": [ -7.657, 4.244, -6.027 ] }, { "index": 543, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/2803", "nt2": "///A/2817", "aa": "///D/60", "trs_dist": -12.787, "rot_dist": 119.378, "six_params": [ -1.819, -2.252, -12.455, -82.737, 34.648, 89.224 ], "C_alpha": [ 3.259, -10.292, -6.879 ] }, { "index": 544, "bpaa": "AA-arg", "z_directions": "-", "nt1": "///A/2808", "nt2": "///A/2813", "aa": "///N/2", "trs_dist": 11.111, "rot_dist": 85.185, "six_params": [ 8.302, 0.264, 7.380, 36.620, 23.851, 75.034 ], "C_alpha": [ 8.698, 4.452, 5.228 ] }, { "index": 545, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///A/2818", "nt2": "///A/2802", "aa": "///D/60", "trs_dist": 12.608, "rot_dist": 88.878, "six_params": [ 5.481, 5.279, 10.053, -23.785, 79.481, 35.250 ], "C_alpha": [ 7.729, 9.498, 3.058 ] }, { "index": 546, "bpaa": "GC-his", "z_directions": "-", "nt1": "///A/2818", "nt2": "///A/2802", "aa": "///2/40", "trs_dist": -11.170, "rot_dist": -146.650, "six_params": [ -0.724, -10.552, -3.590, -14.171, -61.975, -140.542 ], "C_alpha": [ -9.959, -4.525, -2.188 ] }, { "index": 547, "bpaa": "AU-arg", "z_directions": "+", "nt1": "///A/2824", "nt2": "///A/2868", "aa": "///N/45", "trs_dist": 11.844, "rot_dist": 87.557, "six_params": [ -11.713, -0.009, 1.752, -59.716, 48.627, 45.368 ], "C_alpha": [ -10.039, -1.919, 5.978 ] }, { "index": 548, "bpaa": "GC-arg", "z_directions": "+", "nt1": "///A/2825", "nt2": "///A/2867", "aa": "///N/45", "trs_dist": 11.851, "rot_dist": 72.833, "six_params": [ -9.861, 6.483, -1.088, -46.050, 55.751, 9.372 ], "C_alpha": [ -10.331, 5.689, 1.170 ] }, { "index": 549, "bpaa": "GC-pro", "z_directions": "-", "nt1": "///A/2825", "nt2": "///A/2867", "aa": "///N/91", "trs_dist": 9.364, "rot_dist": 172.639, "six_params": [ -5.727, 2.119, 7.099, -13.659, -25.446, 172.398 ], "C_alpha": [ -3.351, -6.875, 5.376 ] }, { "index": 550, "bpaa": "GC-gly", "z_directions": "-", "nt1": "///A/2825", "nt2": "///A/2867", "aa": "///N/92", "trs_dist": 7.148, "rot_dist": -151.738, "six_params": [ 3.123, -4.983, 4.064, 9.629, -25.659, -150.892 ], "C_alpha": [ -4.618, -3.492, 4.208 ] }, { "index": 551, "bpaa": "GC-gly", "z_directions": "+", "nt1": "///A/2825", "nt2": "///A/2867", "aa": "///N/93", "trs_dist": 6.331, "rot_dist": -102.533, "six_params": [ -4.086, -3.074, 3.733, 87.254, 7.638, -59.818 ], "C_alpha": [ -5.855, -2.296, 0.831 ] }, { "index": 552, "bpaa": "GU-pro", "z_directions": "-", "nt1": "///A/2826", "nt2": "///A/2865", "aa": "///N/91", "trs_dist": 9.276, "rot_dist": 128.388, "six_params": [ -4.256, 7.182, 4.044, -26.349, -26.460, 125.290 ], "C_alpha": [ -9.150, -0.707, 1.259 ] }, { "index": 553, "bpaa": "GU-gly", "z_directions": "-", "nt1": "///A/2826", "nt2": "///A/2865", "aa": "///N/92", "trs_dist": 7.946, "rot_dist": 161.978, "six_params": [ 1.269, 7.746, 1.233, -4.959, 20.544, 161.664 ], "C_alpha": [ -7.483, 2.646, 0.629 ] }, { "index": 554, "bpaa": "GU-gly", "z_directions": "-", "nt1": "///A/2826", "nt2": "///A/2865", "aa": "///N/93", "trs_dist": -8.850, "rot_dist": 155.603, "six_params": [ 4.248, 5.652, -5.324, 68.183, 48.565, 147.039 ], "C_alpha": [ -7.071, 4.699, -2.530 ] }, { "index": 555, "bpaa": "GA-ala", "z_directions": "-", "nt1": "///A/2835", "nt2": "///A/2855", "aa": "///P/96", "trs_dist": 9.059, "rot_dist": 95.708, "six_params": [ 8.413, 1.957, -2.732, 29.968, -75.415, 55.877 ], "C_alpha": [ 6.337, 5.473, 3.480 ] }, { "index": 556, "bpaa": "AU-lys", "z_directions": "-", "nt1": "///A/2860", "nt2": "///A/2707", "aa": "///N/5", "trs_dist": 6.732, "rot_dist": 136.890, "six_params": [ -5.583, 3.639, -0.949, 11.989, 72.974, 125.241 ], "C_alpha": [ -5.396, -2.763, 2.913 ] }, { "index": 557, "bpaa": "AU-ser", "z_directions": "-", "nt1": "///A/2860", "nt2": "///A/2707", "aa": "///N/6", "trs_dist": -7.236, "rot_dist": -77.406, "six_params": [ -3.630, -5.651, 2.692, 34.297, -46.905, -53.563 ], "C_alpha": [ -6.300, -3.488, -0.686 ] }, { "index": 558, "bpaa": "GC-asn", "z_directions": "-", "nt1": "///A/2873", "nt2": "///A/2801", "aa": "///2/25", "trs_dist": 9.887, "rot_dist": 169.681, "six_params": [ -5.224, 6.146, 5.718, -83.649, 1.433, 166.136 ], "C_alpha": [ -8.977, -4.129, 0.237 ] }, { "index": 559, "bpaa": "GC-arg", "z_directions": "-", "nt1": "///A/2873", "nt2": "///A/2801", "aa": "///2/39", "trs_dist": -8.219, "rot_dist": 135.644, "six_params": [ 0.863, 7.072, -4.098, -34.713, 42.539, 129.650 ], "C_alpha": [ -5.428, 1.392, -6.011 ] }, { "index": 560, "bpaa": "GC-ala", "z_directions": "-", "nt1": "///A/2886", "nt2": "///A/4", "aa": "///J/134", "trs_dist": -8.180, "rot_dist": 116.294, "six_params": [ 2.704, 6.457, -4.231, 7.707, -26.056, 114.233 ], "C_alpha": [ -3.705, 6.611, -3.075 ] }, { "index": 561, "bpaa": "GC-gln", "z_directions": "+", "nt1": "///B/6", "nt2": "///B/114", "aa": "///O/39", "trs_dist": 11.014, "rot_dist": 16.795, "six_params": [ -10.171, -1.295, 4.023, -2.888, -9.920, 13.259 ], "C_alpha": [ -10.267, -2.395, 3.153 ] }, { "index": 562, "bpaa": "AU-gln", "z_directions": "+", "nt1": "///B/7", "nt2": "///B/113", "aa": "///O/39", "trs_dist": -10.988, "rot_dist": -24.108, "six_params": [ -10.738, 2.318, 0.216, 1.012, -21.741, -10.430 ], "C_alpha": [ -10.322, 3.287, -1.797 ] }, { "index": 563, "bpaa": "AU-val", "z_directions": "-", "nt1": "///B/7", "nt2": "///B/113", "aa": "///O/48", "trs_dist": -8.629, "rot_dist": -130.549, "six_params": [ -0.855, -8.503, -1.194, -10.920, -37.209, -127.355 ], "C_alpha": [ -7.943, -3.289, -0.606 ] }, { "index": 564, "bpaa": "AU-arg", "z_directions": "-", "nt1": "///B/45", "nt2": "///B/40", "aa": "///F/92", "trs_dist": -9.490, "rot_dist": 165.988, "six_params": [ 5.982, 6.588, -3.298, -73.166, -42.562, 161.009 ], "C_alpha": [ -2.765, 8.015, -4.225 ] }, { "index": 565, "bpaa": "AU-lys", "z_directions": "-", "nt1": "///B/45", "nt2": "///B/40", "aa": "///1/2", "trs_dist": -8.593, "rot_dist": 67.321, "six_params": [ 5.787, -5.731, -2.739, 26.533, -17.676, 60.092 ], "C_alpha": [ 7.926, -1.259, -3.065 ] }, { "index": 566, "bpaa": "GC-met", "z_directions": "+", "nt1": "///B/54", "nt2": "///B/30", "aa": "///F/26", "trs_dist": 10.169, "rot_dist": -38.052, "six_params": [ -9.579, -0.853, 3.305, 20.259, -27.982, -16.203 ], "C_alpha": [ -10.152, 0.227, 0.717 ] }, { "index": 567, "bpaa": "AU-tyr", "z_directions": "-", "nt1": "///B/73", "nt2": "///B/103", "aa": "///V/34", "trs_dist": -7.492, "rot_dist": -154.547, "six_params": [ 2.954, -6.883, 0.171, 30.192, -49.212, -150.861 ], "C_alpha": [ -5.871, -4.614, -0.367 ] }, { "index": 568, "bpaa": "AU-pro", "z_directions": "+", "nt1": "///B/73", "nt2": "///B/103", "aa": "///V/40", "trs_dist": 8.061, "rot_dist": 46.215, "six_params": [ -7.377, -1.289, 2.981, -36.353, -24.993, 14.129 ], "C_alpha": [ -7.762, -1.560, 1.608 ] }, { "index": 569, "bpaa": "GA-his", "z_directions": "-", "nt1": "///B/75", "nt2": "///B/101", "aa": "///V/91", "trs_dist": 10.546, "rot_dist": -176.966, "six_params": [ -5.614, -6.242, 6.383, 5.449, -54.725, -176.580 ], "C_alpha": [ -6.686, 7.644, 2.802 ] }, { "index": 570, "bpaa": "GA-asp", "z_directions": "-", "nt1": "///B/75", "nt2": "///B/101", "aa": "///V/93", "trs_dist": -9.498, "rot_dist": 111.849, "six_params": [ 3.700, 7.937, -3.677, 24.208, 57.343, 98.239 ], "C_alpha": [ -5.334, 7.119, -3.318 ] }, { "index": 571, "bpaa": "GG-gln", "z_directions": "+", "nt1": "///B/76", "nt2": "///B/100", "aa": "///V/81", "trs_dist": -10.127, "rot_dist": -72.867, "six_params": [ -6.715, 7.195, 2.387, -62.028, -3.206, -40.179 ], "C_alpha": [ -3.781, 9.192, -1.830 ] }, { "index": 572, "bpaa": "AG-gly", "z_directions": "+", "nt1": "///B/78", "nt2": "///B/98", "aa": "///V/15", "trs_dist": -9.011, "rot_dist": -84.529, "six_params": [ 6.319, 6.409, 0.438, -60.126, -39.259, -47.973 ], "C_alpha": [ 8.391, 3.204, -0.777 ] }, { "index": 573, "bpaa": "AG-lys", "z_directions": "+", "nt1": "///B/78", "nt2": "///B/98", "aa": "///V/16", "trs_dist": 7.740, "rot_dist": -149.894, "six_params": [ -3.298, 6.256, 3.144, -32.960, 6.722, -148.515 ], "C_alpha": [ 5.807, 4.918, 1.425 ] }, { "index": 574, "bpaa": "GU-lys", "z_directions": "+", "nt1": "///B/79", "nt2": "///B/97", "aa": "///V/16", "trs_dist": -7.643, "rot_dist": 163.074, "six_params": [ 0.723, -7.600, -0.354, 25.483, -22.349, 162.300 ], "C_alpha": [ 7.410, -0.209, -1.867 ] }, { "index": 575, "bpaa": "AU-tyr", "z_directions": "-", "nt1": "///B/94", "nt2": "///B/82", "aa": "///Z/51", "trs_dist": 11.619, "rot_dist": -145.519, "six_params": [ -1.885, -10.708, 4.098, 36.078, -2.510, -143.667 ], "C_alpha": [ -11.476, -1.729, 0.535 ] }, { "index": 576, "bpaa": "GU-lys", "z_directions": "-", "nt1": "///B/96", "nt2": "///B/80", "aa": "///V/16", "trs_dist": 8.761, "rot_dist": 61.460, "six_params": [ 7.970, 1.291, 3.401, 25.978, -10.184, 55.321 ], "C_alpha": [ 6.559, 3.914, 4.293 ] }, { "index": 577, "bpaa": "GC-gly", "z_directions": "+", "nt1": "///B/112", "nt2": "///B/8", "aa": "///O/45", "trs_dist": -9.572, "rot_dist": 99.970, "six_params": [ -6.560, 2.960, -6.311, -60.977, 63.102, 53.754 ], "C_alpha": [ -8.388, -3.729, -2.689 ] }, { "index": 578, "bpaa": "GC-gly", "z_directions": "+", "nt1": "///B/112", "nt2": "///B/8", "aa": "///O/46", "trs_dist": -7.010, "rot_dist": 113.378, "six_params": [ -5.105, 4.236, 2.267, -65.859, -8.047, 97.989 ], "C_alpha": [ -6.941, -0.824, -0.733 ] } ], "num_phosAA_hbonds": 867, "phosAA_hbonds": [ { "index": 1, "nt_atom": "///a/9/OP1", "aa_atom": "///e/128/N", "dist": 3.705, "type": "po4:backbone" }, { "index": 2, "nt_atom": "///a/9/OP2", "aa_atom": "///e/127/NZ", "dist": 2.869, "type": "po4:sidechain:salt-bridge" }, { "index": 3, "nt_atom": "///a/18/OP1", "aa_atom": "///e/133/ND2", "dist": 3.792, "type": "po4:sidechain" }, { "index": 4, "nt_atom": "///a/20/OP2", "aa_atom": "///e/131/OG", "dist": 2.277, "type": "po4:sidechain" }, { "index": 5, "nt_atom": "///a/37/OP2", "aa_atom": "///l/120/NZ", "dist": 2.464, "type": "po4:sidechain:salt-bridge" }, { "index": 6, "nt_atom": "///a/38/OP1", "aa_atom": "///l/121/NH2", "dist": 2.858, "type": "po4:sidechain:salt-bridge" }, { "index": 7, "nt_atom": "///a/97/OP2", "aa_atom": "///t/9/NZ", "dist": 2.682, "type": "po4:sidechain:salt-bridge" }, { "index": 8, "nt_atom": "///a/99/OP1", "aa_atom": "///t/17/NH2", "dist": 3.327, "type": "po4:sidechain:salt-bridge" }, { "index": 9, "nt_atom": "///a/99/OP2", "aa_atom": "///t/13/NE2", "dist": 2.744, "type": "po4:sidechain" }, { "index": 10, "nt_atom": "///a/126/OP1", "aa_atom": "///t/70/ND2", "dist": 3.371, "type": "po4:sidechain" }, { "index": 11, "nt_atom": "///a/170/OP1", "aa_atom": "///t/20/NE2", "dist": 3.374, "type": "po4:sidechain:salt-bridge" }, { "index": 12, "nt_atom": "///a/170/OP2", "aa_atom": "///t/64/NZ", "dist": 3.279, "type": "po4:sidechain:salt-bridge" }, { "index": 13, "nt_atom": "///a/169/O3'", "aa_atom": "///t/20/NE2", "dist": 3.437, "type": "po4:sidechain" }, { "index": 14, "nt_atom": "///a/171/OP1", "aa_atom": "///t/60/NE", "dist": 3.276, "type": "po4:sidechain:salt-bridge" }, { "index": 15, "nt_atom": "///a/171/OP2", "aa_atom": "///t/64/NZ", "dist": 3.265, "type": "po4:sidechain:salt-bridge" }, { "index": 16, "nt_atom": "///a/181/OP1", "aa_atom": "///t/77/OG", "dist": 3.510, "type": "po4:sidechain" }, { "index": 17, "nt_atom": "///a/217/OP1", "aa_atom": "///t/63/OD1", "dist": 2.940, "type": "po4:sidechain" }, { "index": 18, "nt_atom": "///a/232/OP1", "aa_atom": "///q/43/NH1", "dist": 2.493, "type": "po4:sidechain:salt-bridge" }, { "index": 19, "nt_atom": "///a/232/OP1", "aa_atom": "///q/43/NH2", "dist": 3.197, "type": "po4:sidechain:salt-bridge" }, { "index": 20, "nt_atom": "///a/235/OP1", "aa_atom": "///l/13/NZ", "dist": 3.548, "type": "po4:sidechain:salt-bridge" }, { "index": 21, "nt_atom": "///a/248/OP1", "aa_atom": "///q/73/OG1", "dist": 2.804, "type": "po4:sidechain" }, { "index": 22, "nt_atom": "///a/249/OP1", "aa_atom": "///q/74/NZ", "dist": 2.389, "type": "po4:sidechain:salt-bridge" }, { "index": 23, "nt_atom": "///a/248/O3'", "aa_atom": "///q/74/NZ", "dist": 3.356, "type": "po4:sidechain" }, { "index": 24, "nt_atom": "///a/253/OP1", "aa_atom": "///t/82/NE2", "dist": 3.642, "type": "po4:sidechain:salt-bridge" }, { "index": 25, "nt_atom": "///a/255/OP2", "aa_atom": "///t/74/NH2", "dist": 2.468, "type": "po4:sidechain:salt-bridge" }, { "index": 26, "nt_atom": "///a/257/OP2", "aa_atom": "///t/74/NH1", "dist": 3.421, "type": "po4:sidechain:salt-bridge" }, { "index": 27, "nt_atom": "///a/271/OP1", "aa_atom": "///q/48/NE2", "dist": 3.146, "type": "po4:sidechain:salt-bridge" }, { "index": 28, "nt_atom": "///a/272/OP2", "aa_atom": "///q/46/NZ", "dist": 3.607, "type": "po4:sidechain:salt-bridge" }, { "index": 29, "nt_atom": "///a/304/OP1", "aa_atom": "///p/31/N", "dist": 3.616, "type": "po4:backbone" }, { "index": 30, "nt_atom": "///a/305/OP1", "aa_atom": "///p/31/NH2", "dist": 3.201, "type": "po4:sidechain:salt-bridge" }, { "index": 31, "nt_atom": "///a/317/OP1", "aa_atom": "///t/21/ND2", "dist": 3.669, "type": "po4:sidechain" }, { "index": 32, "nt_atom": "///a/317/OP1", "aa_atom": "///t/25/NH2", "dist": 2.976, "type": "po4:sidechain:salt-bridge" }, { "index": 33, "nt_atom": "///a/318/OP2", "aa_atom": "///t/21/ND2", "dist": 3.259, "type": "po4:sidechain" }, { "index": 34, "nt_atom": "///a/326/OP2", "aa_atom": "///t/8/NZ", "dist": 3.425, "type": "po4:sidechain:salt-bridge" }, { "index": 35, "nt_atom": "///a/333/OP1", "aa_atom": "///K/97/NH1", "dist": 3.210, "type": "po4:sidechain:salt-bridge" }, { "index": 36, "nt_atom": "///a/333/OP1", "aa_atom": "///K/97/NH2", "dist": 3.213, "type": "po4:sidechain:salt-bridge" }, { "index": 37, "nt_atom": "///a/333/OP2", "aa_atom": "///K/97/NH1", "dist": 2.052, "type": "po4:sidechain:salt-bridge" }, { "index": 38, "nt_atom": "///a/333/OP2", "aa_atom": "///K/97/NH2", "dist": 2.524, "type": "po4:sidechain:salt-bridge" }, { "index": 39, "nt_atom": "///a/339/OP2", "aa_atom": "///P/38/NH2", "dist": 2.878, "type": "po4:sidechain:salt-bridge" }, { "index": 40, "nt_atom": "///a/340/OP1", "aa_atom": "///P/40/NH1", "dist": 2.649, "type": "po4:sidechain:salt-bridge" }, { "index": 41, "nt_atom": "///a/340/OP1", "aa_atom": "///P/40/NH2", "dist": 3.108, "type": "po4:sidechain:salt-bridge" }, { "index": 42, "nt_atom": "///a/357/OP1", "aa_atom": "///l/30/NH1", "dist": 3.174, "type": "po4:sidechain:salt-bridge" }, { "index": 43, "nt_atom": "///a/357/OP1", "aa_atom": "///l/31/N", "dist": 3.477, "type": "po4:backbone" }, { "index": 44, "nt_atom": "///a/369/OP1", "aa_atom": "///p/69/OE2", "dist": 2.894, "type": "po4:sidechain" }, { "index": 45, "nt_atom": "///a/369/OP1", "aa_atom": "///p/70/NH1", "dist": 3.041, "type": "po4:sidechain:salt-bridge" }, { "index": 46, "nt_atom": "///a/370/OP1", "aa_atom": "///p/6/N", "dist": 3.573, "type": "po4:backbone" }, { "index": 47, "nt_atom": "///a/370/OP1", "aa_atom": "///p/68/OG", "dist": 3.180, "type": "po4:sidechain" }, { "index": 48, "nt_atom": "///a/370/OP2", "aa_atom": "///p/69/OE2", "dist": 3.073, "type": "po4:sidechain" }, { "index": 49, "nt_atom": "///a/370/O3'", "aa_atom": "///p/5/NH2", "dist": 3.581, "type": "po4:sidechain" }, { "index": 50, "nt_atom": "///a/384/O3'", "aa_atom": "///p/28/NH2", "dist": 2.808, "type": "po4:sidechain" }, { "index": 51, "nt_atom": "///a/386/OP1", "aa_atom": "///p/8/NH2", "dist": 2.878, "type": "po4:sidechain:salt-bridge" }, { "index": 52, "nt_atom": "///a/386/OP1", "aa_atom": "///p/13/N", "dist": 2.854, "type": "po4:backbone" }, { "index": 53, "nt_atom": "///a/385/O3'", "aa_atom": "///p/8/NH2", "dist": 3.271, "type": "po4:sidechain" }, { "index": 54, "nt_atom": "///a/387/OP1", "aa_atom": "///p/13/NZ", "dist": 3.178, "type": "po4:sidechain:salt-bridge" }, { "index": 55, "nt_atom": "///a/387/OP2", "aa_atom": "///p/12/NZ", "dist": 3.614, "type": "po4:sidechain:salt-bridge" }, { "index": 56, "nt_atom": "///a/397/OP1", "aa_atom": "///d/134/OG", "dist": 2.729, "type": "po4:sidechain" }, { "index": 57, "nt_atom": "///a/397/OP2", "aa_atom": "///d/71/NE2", "dist": 2.908, "type": "po4:sidechain" }, { "index": 58, "nt_atom": "///a/398/OP2", "aa_atom": "///d/115/NH2", "dist": 2.742, "type": "po4:sidechain:salt-bridge" }, { "index": 59, "nt_atom": "///a/401/OP1", "aa_atom": "///d/3/NH2", "dist": 3.428, "type": "po4:sidechain:salt-bridge" }, { "index": 60, "nt_atom": "///a/402/OP1", "aa_atom": "///d/110/OG1", "dist": 3.471, "type": "po4:sidechain" }, { "index": 61, "nt_atom": "///a/402/OP1", "aa_atom": "///d/112/OG", "dist": 3.430, "type": "po4:sidechain" }, { "index": 62, "nt_atom": "///a/403/OP1", "aa_atom": "///d/24/N", "dist": 3.033, "type": "po4:backbone" }, { "index": 63, "nt_atom": "///a/405/OP2", "aa_atom": "///d/26/NH1", "dist": 3.562, "type": "po4:sidechain:salt-bridge" }, { "index": 64, "nt_atom": "///a/421/OP1", "aa_atom": "///d/13/NH2", "dist": 2.356, "type": "po4:sidechain:salt-bridge" }, { "index": 65, "nt_atom": "///a/423/OP2", "aa_atom": "///d/13/NH1", "dist": 3.603, "type": "po4:sidechain:salt-bridge" }, { "index": 66, "nt_atom": "///a/423/O5'", "aa_atom": "///d/31/O", "dist": 3.199, "type": "po4:backbone" }, { "index": 67, "nt_atom": "///a/424/OP1", "aa_atom": "///d/9/N", "dist": 3.531, "type": "po4:backbone" }, { "index": 68, "nt_atom": "///a/424/OP2", "aa_atom": "///d/8/N", "dist": 3.866, "type": "po4:backbone" }, { "index": 69, "nt_atom": "///a/424/OP2", "aa_atom": "///d/22/NZ", "dist": 2.675, "type": "po4:sidechain:salt-bridge" }, { "index": 70, "nt_atom": "///a/445/OP2", "aa_atom": "///p/70/NH1", "dist": 3.365, "type": "po4:sidechain:salt-bridge" }, { "index": 71, "nt_atom": "///a/484/OP1", "aa_atom": "///d/146/NH2", "dist": 2.799, "type": "po4:sidechain:salt-bridge" }, { "index": 72, "nt_atom": "///a/495/OP1", "aa_atom": "///l/114/NH2", "dist": 2.399, "type": "po4:sidechain:salt-bridge" }, { "index": 73, "nt_atom": "///a/496/OP1", "aa_atom": "///l/115/N", "dist": 2.867, "type": "po4:backbone" }, { "index": 74, "nt_atom": "///a/496/OP1", "aa_atom": "///l/115/OG", "dist": 2.778, "type": "po4:sidechain" }, { "index": 75, "nt_atom": "///a/497/OP1", "aa_atom": "///l/116/NZ", "dist": 3.388, "type": "po4:sidechain:salt-bridge" }, { "index": 76, "nt_atom": "///a/503/OP1", "aa_atom": "///d/49/OG", "dist": 2.721, "type": "po4:sidechain" }, { "index": 77, "nt_atom": "///a/505/O5'", "aa_atom": "///d/44/NH1", "dist": 3.334, "type": "po4:sidechain" }, { "index": 78, "nt_atom": "///a/515/OP1", "aa_atom": "///l/51/NZ", "dist": 2.570, "type": "po4:sidechain:salt-bridge" }, { "index": 79, "nt_atom": "///a/516/OP1", "aa_atom": "///l/117/OH", "dist": 3.673, "type": "po4:sidechain" }, { "index": 80, "nt_atom": "///a/516/OP2", "aa_atom": "///l/66/OH", "dist": 3.236, "type": "po4:sidechain" }, { "index": 81, "nt_atom": "///a/531/OP1", "aa_atom": "///l/110/NH2", "dist": 3.456, "type": "po4:sidechain:salt-bridge" }, { "index": 82, "nt_atom": "///a/532/OP1", "aa_atom": "///l/111/N", "dist": 3.190, "type": "po4:backbone" }, { "index": 83, "nt_atom": "///a/536/OP1", "aa_atom": "///d/10/NZ", "dist": 2.652, "type": "po4:sidechain:salt-bridge" }, { "index": 84, "nt_atom": "///a/537/OP1", "aa_atom": "///d/14/NE", "dist": 2.946, "type": "po4:sidechain:salt-bridge" }, { "index": 85, "nt_atom": "///a/537/OP1", "aa_atom": "///d/14/NH2", "dist": 3.188, "type": "po4:sidechain:salt-bridge" }, { "index": 86, "nt_atom": "///a/536/O3'", "aa_atom": "///d/14/NH2", "dist": 2.549, "type": "po4:sidechain" }, { "index": 87, "nt_atom": "///a/538/OP1", "aa_atom": "///d/56/NH2", "dist": 3.650, "type": "po4:sidechain:salt-bridge" }, { "index": 88, "nt_atom": "///a/539/OP1", "aa_atom": "///d/58/NZ", "dist": 2.885, "type": "po4:sidechain:salt-bridge" }, { "index": 89, "nt_atom": "///a/539/OP1", "aa_atom": "///d/62/NH1", "dist": 3.606, "type": "po4:sidechain:salt-bridge" }, { "index": 90, "nt_atom": "///a/540/OP2", "aa_atom": "///d/62/NH2", "dist": 3.948, "type": "po4:sidechain:salt-bridge" }, { "index": 91, "nt_atom": "///a/540/OP2", "aa_atom": "///d/69/N", "dist": 2.945, "type": "po4:backbone" }, { "index": 92, "nt_atom": "///a/540/OP2", "aa_atom": "///d/70/N", "dist": 3.323, "type": "po4:backbone" }, { "index": 93, "nt_atom": "///a/541/OP2", "aa_atom": "///d/2/N", "dist": 3.504, "type": "po4:backbone" }, { "index": 94, "nt_atom": "///a/548/OP1", "aa_atom": "///l/19/OG", "dist": 3.317, "type": "po4:sidechain" }, { "index": 95, "nt_atom": "///a/558/OP1", "aa_atom": "///l/12/NE", "dist": 2.767, "type": "po4:sidechain:salt-bridge" }, { "index": 96, "nt_atom": "///a/575/OP1", "aa_atom": "///o/65/NZ", "dist": 3.505, "type": "po4:sidechain:salt-bridge" }, { "index": 97, "nt_atom": "///a/581/OP1", "aa_atom": "///h/84/NH2", "dist": 2.822, "type": "po4:sidechain:salt-bridge" }, { "index": 98, "nt_atom": "///a/584/OP1", "aa_atom": "///h/31/N", "dist": 2.625, "type": "po4:backbone" }, { "index": 99, "nt_atom": "///a/594/OP1", "aa_atom": "///h/89/N", "dist": 3.619, "type": "po4:backbone" }, { "index": 100, "nt_atom": "///a/607/OP1", "aa_atom": "///d/81/NE", "dist": 3.135, "type": "po4:sidechain:salt-bridge" }, { "index": 101, "nt_atom": "///a/608/OP1", "aa_atom": "///d/83/NZ", "dist": 2.635, "type": "po4:sidechain:salt-bridge" }, { "index": 102, "nt_atom": "///a/608/OP2", "aa_atom": "///d/81/NH2", "dist": 3.274, "type": "po4:sidechain:salt-bridge" }, { "index": 103, "nt_atom": "///a/611/OP1", "aa_atom": "///p/46/N", "dist": 3.756, "type": "po4:backbone" }, { "index": 104, "nt_atom": "///a/647/OP1", "aa_atom": "///h/56/NZ", "dist": 2.828, "type": "po4:sidechain:salt-bridge" }, { "index": 105, "nt_atom": "///a/653/OP2", "aa_atom": "///o/8/NZ", "dist": 3.356, "type": "po4:sidechain:salt-bridge" }, { "index": 106, "nt_atom": "///a/658/OP1", "aa_atom": "///r/53/NE", "dist": 3.133, "type": "po4:sidechain:salt-bridge" }, { "index": 107, "nt_atom": "///a/657/O3'", "aa_atom": "///r/53/NH2", "dist": 3.813, "type": "po4:sidechain" }, { "index": 108, "nt_atom": "///a/666/OP1", "aa_atom": "///f/79/NH2", "dist": 2.905, "type": "po4:sidechain:salt-bridge" }, { "index": 109, "nt_atom": "///a/665/O3'", "aa_atom": "///f/79/NH1", "dist": 3.283, "type": "po4:sidechain" }, { "index": 110, "nt_atom": "///a/665/O3'", "aa_atom": "///f/79/NH2", "dist": 3.253, "type": "po4:sidechain" }, { "index": 111, "nt_atom": "///a/668/OP1", "aa_atom": "///f/86/NH1", "dist": 2.902, "type": "po4:sidechain:salt-bridge" }, { "index": 112, "nt_atom": "///a/683/OP1", "aa_atom": "///k/29/ND2", "dist": 3.191, "type": "po4:sidechain" }, { "index": 113, "nt_atom": "///a/683/OP1", "aa_atom": "///k/46/OG1", "dist": 2.981, "type": "po4:sidechain" }, { "index": 114, "nt_atom": "///a/683/OP1", "aa_atom": "///k/48/N", "dist": 3.619, "type": "po4:backbone" }, { "index": 115, "nt_atom": "///a/683/OP2", "aa_atom": "///k/53/NH1", "dist": 3.134, "type": "po4:sidechain:salt-bridge" }, { "index": 116, "nt_atom": "///a/684/OP2", "aa_atom": "///k/29/ND2", "dist": 2.656, "type": "po4:sidechain" }, { "index": 117, "nt_atom": "///a/685/OP2", "aa_atom": "///k/28/ND2", "dist": 3.918, "type": "po4:sidechain" }, { "index": 118, "nt_atom": "///a/686/OP2", "aa_atom": "///k/28/ND2", "dist": 3.033, "type": "po4:sidechain" }, { "index": 119, "nt_atom": "///a/687/OP1", "aa_atom": "///k/127/NH1", "dist": 3.269, "type": "po4:sidechain:salt-bridge" }, { "index": 120, "nt_atom": "///a/715/OP2", "aa_atom": "///r/42/OG", "dist": 2.761, "type": "po4:sidechain" }, { "index": 121, "nt_atom": "///a/716/OP1", "aa_atom": "///r/43/NH1", "dist": 3.969, "type": "po4:sidechain:salt-bridge" }, { "index": 122, "nt_atom": "///a/716/O3'", "aa_atom": "///u/55/NH2", "dist": 3.390, "type": "po4:sidechain" }, { "index": 123, "nt_atom": "///a/730/OP1", "aa_atom": "///r/61/NE", "dist": 3.107, "type": "po4:sidechain:salt-bridge" }, { "index": 124, "nt_atom": "///a/730/OP1", "aa_atom": "///r/61/NH2", "dist": 2.447, "type": "po4:sidechain:salt-bridge" }, { "index": 125, "nt_atom": "///a/732/OP1", "aa_atom": "///f/4/OH", "dist": 3.431, "type": "po4:sidechain" }, { "index": 126, "nt_atom": "///a/732/OP1", "aa_atom": "///f/91/NH2", "dist": 2.439, "type": "po4:sidechain:salt-bridge" }, { "index": 127, "nt_atom": "///a/732/OP2", "aa_atom": "///f/91/NE", "dist": 3.129, "type": "po4:sidechain:salt-bridge" }, { "index": 128, "nt_atom": "///a/737/OP1", "aa_atom": "///o/58/NH2", "dist": 3.116, "type": "po4:sidechain:salt-bridge" }, { "index": 129, "nt_atom": "///a/736/O3'", "aa_atom": "///o/58/NH1", "dist": 2.979, "type": "po4:sidechain" }, { "index": 130, "nt_atom": "///a/747/OP1", "aa_atom": "///o/69/OH", "dist": 3.161, "type": "po4:sidechain" }, { "index": 131, "nt_atom": "///a/747/OP1", "aa_atom": "///o/73/NZ", "dist": 3.323, "type": "po4:sidechain:salt-bridge" }, { "index": 132, "nt_atom": "///a/774/OP1", "aa_atom": "///k/125/N", "dist": 3.569, "type": "po4:backbone" }, { "index": 133, "nt_atom": "///a/790/OP1", "aa_atom": "///k/128/N", "dist": 3.290, "type": "po4:backbone" }, { "index": 134, "nt_atom": "///a/791/OP1", "aa_atom": "///k/127/NH2", "dist": 2.751, "type": "po4:sidechain:salt-bridge" }, { "index": 135, "nt_atom": "///a/802/OP1", "aa_atom": "///o/48/NZ", "dist": 2.887, "type": "po4:sidechain:salt-bridge" }, { "index": 136, "nt_atom": "///a/803/OP2", "aa_atom": "///o/48/NZ", "dist": 3.165, "type": "po4:sidechain:salt-bridge" }, { "index": 137, "nt_atom": "///a/823/O3'", "aa_atom": "///b/23/NE1", "dist": 3.455, "type": "po4:sidechain" }, { "index": 138, "nt_atom": "///a/829/OP1", "aa_atom": "///r/53/NH2", "dist": 2.569, "type": "po4:sidechain:salt-bridge" }, { "index": 139, "nt_atom": "///a/842/OP1", "aa_atom": "///b/37/NZ", "dist": 2.446, "type": "po4:sidechain:salt-bridge" }, { "index": 140, "nt_atom": "///a/872/OP1", "aa_atom": "///h/80/NE", "dist": 3.170, "type": "po4:sidechain:salt-bridge" }, { "index": 141, "nt_atom": "///a/872/OP1", "aa_atom": "///h/80/NH2", "dist": 3.065, "type": "po4:sidechain:salt-bridge" }, { "index": 142, "nt_atom": "///a/872/OP2", "aa_atom": "///h/80/NH2", "dist": 2.857, "type": "po4:sidechain:salt-bridge" }, { "index": 143, "nt_atom": "///a/874/OP1", "aa_atom": "///l/9/NH2", "dist": 2.685, "type": "po4:sidechain:salt-bridge" }, { "index": 144, "nt_atom": "///a/874/OP2", "aa_atom": "///l/3/OG1", "dist": 3.672, "type": "po4:sidechain" }, { "index": 145, "nt_atom": "///a/875/OP2", "aa_atom": "///l/9/NH1", "dist": 3.704, "type": "po4:sidechain:salt-bridge" }, { "index": 146, "nt_atom": "///a/876/OP2", "aa_atom": "///l/10/NZ", "dist": 2.988, "type": "po4:sidechain:salt-bridge" }, { "index": 147, "nt_atom": "///a/905/OP2", "aa_atom": "///l/94/NH2", "dist": 2.516, "type": "po4:sidechain:salt-bridge" }, { "index": 148, "nt_atom": "///a/906/OP1", "aa_atom": "///l/43/NZ", "dist": 3.624, "type": "po4:sidechain:salt-bridge" }, { "index": 149, "nt_atom": "///a/906/OP2", "aa_atom": "///l/86/NH2", "dist": 3.878, "type": "po4:sidechain:salt-bridge" }, { "index": 150, "nt_atom": "///a/927/OP2", "aa_atom": "///g/3/N", "dist": 3.576, "type": "po4:backbone" }, { "index": 151, "nt_atom": "///a/933/OP1", "aa_atom": "///g/95/NH1", "dist": 3.032, "type": "po4:sidechain:salt-bridge" }, { "index": 152, "nt_atom": "///a/933/OP1", "aa_atom": "///g/95/NH2", "dist": 2.749, "type": "po4:sidechain:salt-bridge" }, { "index": 153, "nt_atom": "///a/932/O3'", "aa_atom": "///g/95/NH1", "dist": 3.433, "type": "po4:sidechain" }, { "index": 154, "nt_atom": "///a/942/OP1", "aa_atom": "///m/108/N", "dist": 3.294, "type": "po4:backbone" }, { "index": 155, "nt_atom": "///a/942/OP1", "aa_atom": "///m/108/OG1", "dist": 2.906, "type": "po4:sidechain" }, { "index": 156, "nt_atom": "///a/942/OP2", "aa_atom": "///m/105/O", "dist": 2.833, "type": "po4:backbone" }, { "index": 157, "nt_atom": "///a/942/OP2", "aa_atom": "///m/105/ND2", "dist": 3.306, "type": "po4:sidechain" }, { "index": 158, "nt_atom": "///a/945/OP2", "aa_atom": "///m/101/NH1", "dist": 3.811, "type": "po4:sidechain:salt-bridge" }, { "index": 159, "nt_atom": "///a/952/OP1", "aa_atom": "///s/55/NH1", "dist": 3.317, "type": "po4:sidechain:salt-bridge" }, { "index": 160, "nt_atom": "///a/952/OP1", "aa_atom": "///s/55/NH2", "dist": 3.321, "type": "po4:sidechain:salt-bridge" }, { "index": 161, "nt_atom": "///a/967/OP1", "aa_atom": "///j/59/NZ", "dist": 2.432, "type": "po4:sidechain:salt-bridge" }, { "index": 162, "nt_atom": "///a/968/OP1", "aa_atom": "///n/69/NH1", "dist": 2.661, "type": "po4:sidechain:salt-bridge" }, { "index": 163, "nt_atom": "///a/968/OP1", "aa_atom": "///n/69/NH2", "dist": 2.700, "type": "po4:sidechain:salt-bridge" }, { "index": 164, "nt_atom": "///a/967/O3'", "aa_atom": "///n/69/NH2", "dist": 3.075, "type": "po4:sidechain" }, { "index": 165, "nt_atom": "///a/967/O3'", "aa_atom": "///n/81/NH1", "dist": 3.500, "type": "po4:sidechain" }, { "index": 166, "nt_atom": "///a/970/OP1", "aa_atom": "///n/71/ND1", "dist": 3.424, "type": "po4:sidechain:salt-bridge" }, { "index": 167, "nt_atom": "///a/970/OP1", "aa_atom": "///n/72/N", "dist": 3.113, "type": "po4:backbone" }, { "index": 168, "nt_atom": "///a/975/O5'", "aa_atom": "///n/10/OE2", "dist": 3.053, "type": "po4:sidechain" }, { "index": 169, "nt_atom": "///a/976/OP2", "aa_atom": "///n/63/NH2", "dist": 2.898, "type": "po4:sidechain:salt-bridge" }, { "index": 170, "nt_atom": "///a/975/O3'", "aa_atom": "///n/63/NH2", "dist": 2.795, "type": "po4:sidechain" }, { "index": 171, "nt_atom": "///a/976/O3'", "aa_atom": "///n/9/NH2", "dist": 3.579, "type": "po4:sidechain" }, { "index": 172, "nt_atom": "///a/1001/OP1", "aa_atom": "///n/19/NZ", "dist": 3.382, "type": "po4:sidechain:salt-bridge" }, { "index": 173, "nt_atom": "///a/1006/OP1", "aa_atom": "///s/17/NZ", "dist": 3.267, "type": "po4:sidechain:salt-bridge" }, { "index": 174, "nt_atom": "///a/1006/OP2", "aa_atom": "///s/17/NZ", "dist": 2.933, "type": "po4:sidechain:salt-bridge" }, { "index": 175, "nt_atom": "///a/1007/OP2", "aa_atom": "///s/17/NZ", "dist": 2.924, "type": "po4:sidechain:salt-bridge" }, { "index": 176, "nt_atom": "///a/1008/OP2", "aa_atom": "///s/18/NZ", "dist": 2.768, "type": "po4:sidechain:salt-bridge" }, { "index": 177, "nt_atom": "///a/1042/OP1", "aa_atom": "///n/4/N", "dist": 2.992, "type": "po4:backbone" }, { "index": 178, "nt_atom": "///a/1051/O3'", "aa_atom": "///c/154/OG", "dist": 3.617, "type": "po4:sidechain" }, { "index": 179, "nt_atom": "///a/1053/OP2", "aa_atom": "///c/199/NZ", "dist": 3.293, "type": "po4:sidechain:salt-bridge" }, { "index": 180, "nt_atom": "///a/1054/OP1", "aa_atom": "///n/85/NH2", "dist": 3.036, "type": "po4:sidechain:salt-bridge" }, { "index": 181, "nt_atom": "///a/1067/OP1", "aa_atom": "///e/63/NZ", "dist": 2.859, "type": "po4:sidechain:salt-bridge" }, { "index": 182, "nt_atom": "///a/1067/OP2", "aa_atom": "///e/63/NZ", "dist": 3.355, "type": "po4:sidechain:salt-bridge" }, { "index": 183, "nt_atom": "///a/1070/OP1", "aa_atom": "///b/178/NZ", "dist": 3.230, "type": "po4:sidechain:salt-bridge" }, { "index": 184, "nt_atom": "///a/1072/O3'", "aa_atom": "///e/139/OH", "dist": 3.440, "type": "po4:sidechain" }, { "index": 185, "nt_atom": "///a/1074/OP1", "aa_atom": "///e/51/NH2", "dist": 3.095, "type": "po4:sidechain:salt-bridge" }, { "index": 186, "nt_atom": "///a/1075/OP1", "aa_atom": "///e/23/O", "dist": 2.975, "type": "po4:backbone" }, { "index": 187, "nt_atom": "///a/1075/OP2", "aa_atom": "///e/53/NZ", "dist": 2.828, "type": "po4:sidechain:salt-bridge" }, { "index": 188, "nt_atom": "///a/1075/O5'", "aa_atom": "///e/53/NZ", "dist": 3.060, "type": "po4:sidechain" }, { "index": 189, "nt_atom": "///a/1093/OP1", "aa_atom": "///b/74/NH2", "dist": 2.682, "type": "po4:sidechain:salt-bridge" }, { "index": 190, "nt_atom": "///a/1095/OP1", "aa_atom": "///b/95/NH2", "dist": 2.394, "type": "po4:sidechain:salt-bridge" }, { "index": 191, "nt_atom": "///a/1099/OP1", "aa_atom": "///b/113/NH2", "dist": 2.380, "type": "po4:sidechain:salt-bridge" }, { "index": 192, "nt_atom": "///a/1098/O3'", "aa_atom": "///b/113/NH2", "dist": 3.190, "type": "po4:sidechain" }, { "index": 193, "nt_atom": "///a/1102/OP1", "aa_atom": "///c/175/N", "dist": 3.696, "type": "po4:backbone" }, { "index": 194, "nt_atom": "///a/1112/OP1", "aa_atom": "///i/11/NH2", "dist": 2.673, "type": "po4:sidechain:salt-bridge" }, { "index": 195, "nt_atom": "///a/1112/OP1", "aa_atom": "///i/106/NH1", "dist": 2.948, "type": "po4:sidechain:salt-bridge" }, { "index": 196, "nt_atom": "///a/1111/O3'", "aa_atom": "///i/106/NH1", "dist": 2.443, "type": "po4:sidechain" }, { "index": 197, "nt_atom": "///a/1113/OP2", "aa_atom": "///i/11/NH2", "dist": 3.377, "type": "po4:sidechain:salt-bridge" }, { "index": 198, "nt_atom": "///a/1118/OP1", "aa_atom": "///j/38/N", "dist": 3.474, "type": "po4:backbone" }, { "index": 199, "nt_atom": "///a/1142/OP1", "aa_atom": "///i/7/OH", "dist": 3.520, "type": "po4:sidechain" }, { "index": 200, "nt_atom": "///a/1141/O3'", "aa_atom": "///i/7/OH", "dist": 2.464, "type": "po4:sidechain" }, { "index": 201, "nt_atom": "///a/1143/OP1", "aa_atom": "///i/16/OG1", "dist": 3.296, "type": "po4:sidechain" }, { "index": 202, "nt_atom": "///a/1145/OP1", "aa_atom": "///j/44/OG1", "dist": 3.533, "type": "po4:sidechain" }, { "index": 203, "nt_atom": "///a/1146/OP1", "aa_atom": "///j/19/OD2", "dist": 3.188, "type": "po4:sidechain" }, { "index": 204, "nt_atom": "///a/1146/OP1", "aa_atom": "///j/72/NH2", "dist": 3.192, "type": "po4:sidechain:salt-bridge" }, { "index": 205, "nt_atom": "///a/1164/OP1", "aa_atom": "///b/139/NH1", "dist": 3.041, "type": "po4:sidechain:salt-bridge" }, { "index": 206, "nt_atom": "///a/1172/OP1", "aa_atom": "///i/95/NE", "dist": 3.363, "type": "po4:sidechain:salt-bridge" }, { "index": 207, "nt_atom": "///a/1172/OP1", "aa_atom": "///i/95/NH2", "dist": 3.123, "type": "po4:sidechain:salt-bridge" }, { "index": 208, "nt_atom": "///a/1172/O5'", "aa_atom": "///i/95/NH2", "dist": 3.198, "type": "po4:sidechain" }, { "index": 209, "nt_atom": "///a/1173/OP2", "aa_atom": "///i/95/NH2", "dist": 2.431, "type": "po4:sidechain:salt-bridge" }, { "index": 210, "nt_atom": "///a/1173/OP2", "aa_atom": "///i/99/NH2", "dist": 3.177, "type": "po4:sidechain:salt-bridge" }, { "index": 211, "nt_atom": "///a/1174/OP1", "aa_atom": "///i/99/NH1", "dist": 3.293, "type": "po4:sidechain:salt-bridge" }, { "index": 212, "nt_atom": "///a/1174/OP1", "aa_atom": "///i/105/OG1", "dist": 2.384, "type": "po4:sidechain" }, { "index": 213, "nt_atom": "///a/1174/OP2", "aa_atom": "///i/99/NH1", "dist": 3.212, "type": "po4:sidechain:salt-bridge" }, { "index": 214, "nt_atom": "///a/1173/O3'", "aa_atom": "///i/105/OG1", "dist": 3.145, "type": "po4:sidechain" }, { "index": 215, "nt_atom": "///a/1181/OP1", "aa_atom": "///i/115/NZ", "dist": 2.658, "type": "po4:sidechain:salt-bridge" }, { "index": 216, "nt_atom": "///a/1180/O3'", "aa_atom": "///i/115/NZ", "dist": 2.815, "type": "po4:sidechain" }, { "index": 217, "nt_atom": "///a/1184/OP1", "aa_atom": "///c/5/N", "dist": 2.560, "type": "po4:backbone" }, { "index": 218, "nt_atom": "///a/1186/OP1", "aa_atom": "///c/4/NZ", "dist": 2.620, "type": "po4:sidechain:salt-bridge" }, { "index": 219, "nt_atom": "///a/1186/OP2", "aa_atom": "///c/4/NZ", "dist": 3.182, "type": "po4:sidechain:salt-bridge" }, { "index": 220, "nt_atom": "///a/1210/OP1", "aa_atom": "///n/5/OG", "dist": 2.695, "type": "po4:sidechain" }, { "index": 221, "nt_atom": "///a/1213/OP1", "aa_atom": "///n/53/NH1", "dist": 2.527, "type": "po4:sidechain:salt-bridge" }, { "index": 222, "nt_atom": "///a/1213/O5'", "aa_atom": "///n/53/NH1", "dist": 2.967, "type": "po4:sidechain" }, { "index": 223, "nt_atom": "///a/1216/OP1", "aa_atom": "///s/78/NH1", "dist": 2.441, "type": "po4:sidechain:salt-bridge" }, { "index": 224, "nt_atom": "///a/1219/OP1", "aa_atom": "///m/102/N", "dist": 3.836, "type": "po4:backbone" }, { "index": 225, "nt_atom": "///a/1220/OP2", "aa_atom": "///m/102/OG1", "dist": 3.577, "type": "po4:sidechain" }, { "index": 226, "nt_atom": "///a/1221/OP1", "aa_atom": "///s/80/OH", "dist": 2.336, "type": "po4:sidechain" }, { "index": 227, "nt_atom": "///a/1221/OP2", "aa_atom": "///m/110/NZ", "dist": 3.194, "type": "po4:sidechain:salt-bridge" }, { "index": 228, "nt_atom": "///a/1223/OP2", "aa_atom": "///m/107/NH2", "dist": 3.601, "type": "po4:sidechain:salt-bridge" }, { "index": 229, "nt_atom": "///a/1226/OP1", "aa_atom": "///i/128/OG", "dist": 3.151, "type": "po4:sidechain" }, { "index": 230, "nt_atom": "///a/1242/OP1", "aa_atom": "///i/33/NH2", "dist": 3.899, "type": "po4:sidechain:salt-bridge" }, { "index": 231, "nt_atom": "///a/1244/OP1", "aa_atom": "///i/69/N", "dist": 2.946, "type": "po4:backbone" }, { "index": 232, "nt_atom": "///a/1249/OP1", "aa_atom": "///n/76/NZ", "dist": 3.347, "type": "po4:sidechain:salt-bridge" }, { "index": 233, "nt_atom": "///a/1286/OP2", "aa_atom": "///g/41/NH1", "dist": 3.475, "type": "po4:sidechain:salt-bridge" }, { "index": 234, "nt_atom": "///a/1290/OP1", "aa_atom": "///m/14/NE2", "dist": 3.259, "type": "po4:sidechain:salt-bridge" }, { "index": 235, "nt_atom": "///a/1289/O3'", "aa_atom": "///m/14/NE2", "dist": 3.489, "type": "po4:sidechain" }, { "index": 236, "nt_atom": "///a/1296/OP1", "aa_atom": "///m/13/NZ", "dist": 2.841, "type": "po4:sidechain:salt-bridge" }, { "index": 237, "nt_atom": "///a/1296/OP2", "aa_atom": "///m/21/OH", "dist": 2.824, "type": "po4:sidechain" }, { "index": 238, "nt_atom": "///a/1302/OP1", "aa_atom": "///m/97/N", "dist": 2.873, "type": "po4:backbone" }, { "index": 239, "nt_atom": "///a/1302/OP1", "aa_atom": "///m/98/N", "dist": 3.553, "type": "po4:backbone" }, { "index": 240, "nt_atom": "///a/1302/OP1", "aa_atom": "///m/109/NH1", "dist": 2.942, "type": "po4:sidechain:salt-bridge" }, { "index": 241, "nt_atom": "///a/1301/O3'", "aa_atom": "///m/109/NH1", "dist": 2.580, "type": "po4:sidechain" }, { "index": 242, "nt_atom": "///a/1303/OP2", "aa_atom": "///m/98/NE", "dist": 2.723, "type": "po4:sidechain:salt-bridge" }, { "index": 243, "nt_atom": "///a/1303/OP2", "aa_atom": "///m/98/NH2", "dist": 3.165, "type": "po4:sidechain:salt-bridge" }, { "index": 244, "nt_atom": "///a/1307/OP2", "aa_atom": "///s/5/N", "dist": 3.372, "type": "po4:backbone" }, { "index": 245, "nt_atom": "///a/1308/OP2", "aa_atom": "///s/4/OG", "dist": 2.557, "type": "po4:sidechain" }, { "index": 246, "nt_atom": "///a/1310/OP2", "aa_atom": "///n/28/NZ", "dist": 3.461, "type": "po4:sidechain:salt-bridge" }, { "index": 247, "nt_atom": "///a/1311/OP1", "aa_atom": "///n/24/NH2", "dist": 2.357, "type": "po4:sidechain:salt-bridge" }, { "index": 248, "nt_atom": "///a/1313/OP1", "aa_atom": "///s/3/NH1", "dist": 3.013, "type": "po4:sidechain:salt-bridge" }, { "index": 249, "nt_atom": "///a/1313/OP1", "aa_atom": "///s/70/NZ", "dist": 3.540, "type": "po4:sidechain:salt-bridge" }, { "index": 250, "nt_atom": "///a/1312/O3'", "aa_atom": "///s/3/NH1", "dist": 3.349, "type": "po4:sidechain" }, { "index": 251, "nt_atom": "///a/1316/OP1", "aa_atom": "///s/78/NH2", "dist": 3.305, "type": "po4:sidechain:salt-bridge" }, { "index": 252, "nt_atom": "///a/1322/OP1", "aa_atom": "///m/28/OG1", "dist": 3.436, "type": "po4:sidechain" }, { "index": 253, "nt_atom": "///a/1323/OP1", "aa_atom": "///m/26/N", "dist": 3.233, "type": "po4:backbone" }, { "index": 254, "nt_atom": "///a/1323/OP1", "aa_atom": "///m/28/OG1", "dist": 3.078, "type": "po4:sidechain" }, { "index": 255, "nt_atom": "///a/1323/OP1", "aa_atom": "///m/29/N", "dist": 3.137, "type": "po4:backbone" }, { "index": 256, "nt_atom": "///a/1323/OP1", "aa_atom": "///m/29/OG1", "dist": 2.635, "type": "po4:sidechain" }, { "index": 257, "nt_atom": "///a/1322/O3'", "aa_atom": "///m/29/OG1", "dist": 3.055, "type": "po4:sidechain" }, { "index": 258, "nt_atom": "///a/1324/OP1", "aa_atom": "///m/24/N", "dist": 3.431, "type": "po4:backbone" }, { "index": 259, "nt_atom": "///a/1324/O3'", "aa_atom": "///m/70/NH2", "dist": 3.360, "type": "po4:sidechain" }, { "index": 260, "nt_atom": "///a/1337/OP1", "aa_atom": "///i/127/OH", "dist": 3.978, "type": "po4:sidechain" }, { "index": 261, "nt_atom": "///a/1339/OP1", "aa_atom": "///i/122/NH1", "dist": 2.912, "type": "po4:sidechain:salt-bridge" }, { "index": 262, "nt_atom": "///a/1340/OP1", "aa_atom": "///i/122/NH1", "dist": 3.649, "type": "po4:sidechain:salt-bridge" }, { "index": 263, "nt_atom": "///a/1343/OP1", "aa_atom": "///i/122/N", "dist": 3.478, "type": "po4:backbone" }, { "index": 264, "nt_atom": "///a/1344/OP1", "aa_atom": "///i/123/NZ", "dist": 3.218, "type": "po4:sidechain:salt-bridge" }, { "index": 265, "nt_atom": "///a/1344/OP2", "aa_atom": "///i/120/NZ", "dist": 2.913, "type": "po4:sidechain:salt-bridge" }, { "index": 266, "nt_atom": "///a/1344/OP2", "aa_atom": "///i/123/NZ", "dist": 3.082, "type": "po4:sidechain:salt-bridge" }, { "index": 267, "nt_atom": "///a/1352/OP1", "aa_atom": "///n/75/N", "dist": 3.195, "type": "po4:backbone" }, { "index": 268, "nt_atom": "///a/1353/OP1", "aa_atom": "///n/62/ND2", "dist": 3.251, "type": "po4:sidechain" }, { "index": 269, "nt_atom": "///a/1353/OP2", "aa_atom": "///n/62/ND2", "dist": 3.239, "type": "po4:sidechain" }, { "index": 270, "nt_atom": "///a/1353/OP2", "aa_atom": "///n/75/NE", "dist": 3.277, "type": "po4:sidechain:salt-bridge" }, { "index": 271, "nt_atom": "///a/1353/OP2", "aa_atom": "///n/75/NH2", "dist": 2.373, "type": "po4:sidechain:salt-bridge" }, { "index": 272, "nt_atom": "///a/1353/O5'", "aa_atom": "///n/75/NH2", "dist": 3.368, "type": "po4:sidechain" }, { "index": 273, "nt_atom": "///a/1354/OP2", "aa_atom": "///n/75/NH2", "dist": 3.666, "type": "po4:sidechain:salt-bridge" }, { "index": 274, "nt_atom": "///a/1359/OP1", "aa_atom": "///i/119/NH2", "dist": 3.557, "type": "po4:sidechain:salt-bridge" }, { "index": 275, "nt_atom": "///a/1360/OP1", "aa_atom": "///i/119/NH1", "dist": 2.701, "type": "po4:sidechain:salt-bridge" }, { "index": 276, "nt_atom": "///a/1361/OP1", "aa_atom": "///i/117/N", "dist": 3.369, "type": "po4:backbone" }, { "index": 277, "nt_atom": "///a/1361/OP2", "aa_atom": "///i/114/NZ", "dist": 2.726, "type": "po4:sidechain:salt-bridge" }, { "index": 278, "nt_atom": "///a/1363/OP2", "aa_atom": "///i/114/N", "dist": 3.404, "type": "po4:backbone" }, { "index": 279, "nt_atom": "///a/1365/OP1", "aa_atom": "///i/14/OG1", "dist": 2.319, "type": "po4:sidechain" }, { "index": 280, "nt_atom": "///a/1366/OP1", "aa_atom": "///i/72/N", "dist": 2.699, "type": "po4:backbone" }, { "index": 281, "nt_atom": "///a/1366/OP1", "aa_atom": "///i/73/N", "dist": 2.805, "type": "po4:backbone" }, { "index": 282, "nt_atom": "///a/1366/OP1", "aa_atom": "///i/74/N", "dist": 3.289, "type": "po4:backbone" }, { "index": 283, "nt_atom": "///a/1366/OP2", "aa_atom": "///i/13/NZ", "dist": 3.428, "type": "po4:sidechain:salt-bridge" }, { "index": 284, "nt_atom": "///a/1369/OP1", "aa_atom": "///g/25/NZ", "dist": 3.570, "type": "po4:sidechain:salt-bridge" }, { "index": 285, "nt_atom": "///a/1370/OP2", "aa_atom": "///g/25/NZ", "dist": 2.964, "type": "po4:sidechain:salt-bridge" }, { "index": 286, "nt_atom": "///a/1369/O3'", "aa_atom": "///g/29/NE2", "dist": 3.689, "type": "po4:sidechain" }, { "index": 287, "nt_atom": "///a/1371/OP1", "aa_atom": "///g/92/NH2", "dist": 2.820, "type": "po4:sidechain:salt-bridge" }, { "index": 288, "nt_atom": "///a/1416/OP1", "aa_atom": "///K/48/O", "dist": 3.333, "type": "po4:backbone" }, { "index": 289, "nt_atom": "///a/1426/OP1", "aa_atom": "///P/107/N", "dist": 3.128, "type": "po4:backbone" }, { "index": 290, "nt_atom": "///a/1427/OP1", "aa_atom": "///P/107/NZ", "dist": 3.625, "type": "po4:sidechain:salt-bridge" }, { "index": 291, "nt_atom": "///a/1430/OP1", "aa_atom": "///t/18/NH2", "dist": 3.243, "type": "po4:sidechain:salt-bridge" }, { "index": 292, "nt_atom": "///a/1431/OP1", "aa_atom": "///t/29/NH1", "dist": 3.378, "type": "po4:sidechain:salt-bridge" }, { "index": 293, "nt_atom": "///a/1433/OP1", "aa_atom": "///t/37/NZ", "dist": 3.328, "type": "po4:sidechain:salt-bridge" }, { "index": 294, "nt_atom": "///a/1458/OP1", "aa_atom": "///P/110/NH1", "dist": 3.438, "type": "po4:sidechain:salt-bridge" }, { "index": 295, "nt_atom": "///a/1458/OP2", "aa_atom": "///P/110/NH2", "dist": 3.402, "type": "po4:sidechain:salt-bridge" }, { "index": 296, "nt_atom": "///a/1520/OP1", "aa_atom": "///u/45/NH2", "dist": 3.433, "type": "po4:sidechain:salt-bridge" }, { "index": 297, "nt_atom": "///A/17/OP1", "aa_atom": "///2/11/OG", "dist": 3.546, "type": "po4:sidechain" }, { "index": 298, "nt_atom": "///A/16/O3'", "aa_atom": "///2/11/OG", "dist": 3.323, "type": "po4:sidechain" }, { "index": 299, "nt_atom": "///A/18/OP1", "aa_atom": "///Q/26/N", "dist": 2.910, "type": "po4:backbone" }, { "index": 300, "nt_atom": "///A/18/OP1", "aa_atom": "///Q/30/NH2", "dist": 3.626, "type": "po4:sidechain:salt-bridge" }, { "index": 301, "nt_atom": "///A/19/OP1", "aa_atom": "///Q/23/N", "dist": 3.273, "type": "po4:backbone" }, { "index": 302, "nt_atom": "///A/58/OP1", "aa_atom": "///T/78/OD1", "dist": 3.028, "type": "po4:sidechain" }, { "index": 303, "nt_atom": "///A/59/OP1", "aa_atom": "///T/77/ND2", "dist": 3.467, "type": "po4:sidechain" }, { "index": 304, "nt_atom": "///A/60/OP1", "aa_atom": "///Y/47/NZ", "dist": 3.479, "type": "po4:sidechain:salt-bridge" }, { "index": 305, "nt_atom": "///A/59/O3'", "aa_atom": "///Y/47/NZ", "dist": 3.393, "type": "po4:sidechain" }, { "index": 306, "nt_atom": "///A/61/O3'", "aa_atom": "///Y/32/NZ", "dist": 2.658, "type": "po4:sidechain" }, { "index": 307, "nt_atom": "///A/65/OP1", "aa_atom": "///T/75/N", "dist": 3.647, "type": "po4:backbone" }, { "index": 308, "nt_atom": "///A/74/OP1", "aa_atom": "///Y/48/NH1", "dist": 3.017, "type": "po4:sidechain:salt-bridge" }, { "index": 309, "nt_atom": "///A/74/OP1", "aa_atom": "///Y/48/NH2", "dist": 2.860, "type": "po4:sidechain:salt-bridge" }, { "index": 310, "nt_atom": "///A/75/O5'", "aa_atom": "///Y/48/NH2", "dist": 3.671, "type": "po4:sidechain" }, { "index": 311, "nt_atom": "///A/75/O3'", "aa_atom": "///Y/48/NE", "dist": 3.232, "type": "po4:sidechain" }, { "index": 312, "nt_atom": "///A/77/OP1", "aa_atom": "///Y/52/NH1", "dist": 3.211, "type": "po4:sidechain:salt-bridge" }, { "index": 313, "nt_atom": "///A/77/OP1", "aa_atom": "///Y/52/NH2", "dist": 2.412, "type": "po4:sidechain:salt-bridge" }, { "index": 314, "nt_atom": "///A/84/OP2", "aa_atom": "///U/5/NH1", "dist": 2.773, "type": "po4:sidechain:salt-bridge" }, { "index": 315, "nt_atom": "///A/84/OP2", "aa_atom": "///U/5/NH2", "dist": 2.779, "type": "po4:sidechain:salt-bridge" }, { "index": 316, "nt_atom": "///A/85/OP1", "aa_atom": "///U/2/NE2", "dist": 3.000, "type": "po4:sidechain" }, { "index": 317, "nt_atom": "///A/125/OP2", "aa_atom": "///4/19/NE", "dist": 3.715, "type": "po4:sidechain:salt-bridge" }, { "index": 318, "nt_atom": "///A/126/OP2", "aa_atom": "///4/18/N", "dist": 3.061, "type": "po4:backbone" }, { "index": 319, "nt_atom": "///A/126/OP2", "aa_atom": "///4/19/N", "dist": 2.758, "type": "po4:backbone" }, { "index": 320, "nt_atom": "///A/188/OP1", "aa_atom": "///X/14/OG1", "dist": 3.592, "type": "po4:sidechain" }, { "index": 321, "nt_atom": "///A/189/OP2", "aa_atom": "///X/26/NH2", "dist": 3.188, "type": "po4:sidechain:salt-bridge" }, { "index": 322, "nt_atom": "///A/190/OP2", "aa_atom": "///X/26/NH1", "dist": 3.041, "type": "po4:sidechain:salt-bridge" }, { "index": 323, "nt_atom": "///A/200/OP1", "aa_atom": "///X/23/ND2", "dist": 3.091, "type": "po4:sidechain" }, { "index": 324, "nt_atom": "///A/201/OP1", "aa_atom": "///X/24/NZ", "dist": 3.328, "type": "po4:sidechain:salt-bridge" }, { "index": 325, "nt_atom": "///A/243/OP2", "aa_atom": "///5/6/OG1", "dist": 3.330, "type": "po4:sidechain" }, { "index": 326, "nt_atom": "///A/250/OP1", "aa_atom": "///5/13/NH2", "dist": 3.623, "type": "po4:sidechain:salt-bridge" }, { "index": 327, "nt_atom": "///A/250/OP2", "aa_atom": "///5/13/NH1", "dist": 3.132, "type": "po4:sidechain:salt-bridge" }, { "index": 328, "nt_atom": "///A/251/OP1", "aa_atom": "///5/7/NZ", "dist": 3.070, "type": "po4:sidechain:salt-bridge" }, { "index": 329, "nt_atom": "///A/253/OP2", "aa_atom": "///5/5/NZ", "dist": 2.973, "type": "po4:sidechain:salt-bridge" }, { "index": 330, "nt_atom": "///A/254/OP2", "aa_atom": "///5/5/NZ", "dist": 3.443, "type": "po4:sidechain:salt-bridge" }, { "index": 331, "nt_atom": "///A/292/OP1", "aa_atom": "///U/84/N", "dist": 3.488, "type": "po4:backbone" }, { "index": 332, "nt_atom": "///A/292/OP1", "aa_atom": "///U/85/NZ", "dist": 3.516, "type": "po4:sidechain:salt-bridge" }, { "index": 333, "nt_atom": "///A/293/OP1", "aa_atom": "///U/85/NZ", "dist": 3.104, "type": "po4:sidechain:salt-bridge" }, { "index": 334, "nt_atom": "///A/295/OP2", "aa_atom": "///U/81/NH2", "dist": 2.453, "type": "po4:sidechain:salt-bridge" }, { "index": 335, "nt_atom": "///A/295/O5'", "aa_atom": "///U/81/NH2", "dist": 3.182, "type": "po4:sidechain" }, { "index": 336, "nt_atom": "///A/315/O5'", "aa_atom": "///E/130/OG1", "dist": 3.654, "type": "po4:sidechain" }, { "index": 337, "nt_atom": "///A/315/O3'", "aa_atom": "///E/161/NH1", "dist": 2.794, "type": "po4:sidechain" }, { "index": 338, "nt_atom": "///A/323/OP1", "aa_atom": "///U/68/ND2", "dist": 3.369, "type": "po4:sidechain" }, { "index": 339, "nt_atom": "///A/331/OP2", "aa_atom": "///U/3/NZ", "dist": 3.321, "type": "po4:sidechain:salt-bridge" }, { "index": 340, "nt_atom": "///A/363/OP1", "aa_atom": "///X/62/NH2", "dist": 2.642, "type": "po4:sidechain:salt-bridge" }, { "index": 341, "nt_atom": "///A/364/OP2", "aa_atom": "///X/54/NZ", "dist": 3.275, "type": "po4:sidechain:salt-bridge" }, { "index": 342, "nt_atom": "///A/372/OP1", "aa_atom": "///X/16/ND2", "dist": 2.537, "type": "po4:sidechain" }, { "index": 343, "nt_atom": "///A/387/OP2", "aa_atom": "///X/10/NZ", "dist": 2.636, "type": "po4:sidechain:salt-bridge" }, { "index": 344, "nt_atom": "///A/388/OP1", "aa_atom": "///X/32/N", "dist": 3.528, "type": "po4:backbone" }, { "index": 345, "nt_atom": "///A/388/OP2", "aa_atom": "///X/10/NZ", "dist": 3.307, "type": "po4:sidechain:salt-bridge" }, { "index": 346, "nt_atom": "///A/389/OP1", "aa_atom": "///X/32/ND2", "dist": 3.614, "type": "po4:sidechain" }, { "index": 347, "nt_atom": "///A/434/OP1", "aa_atom": "///E/40/O", "dist": 2.938, "type": "po4:backbone" }, { "index": 348, "nt_atom": "///A/435/OP1", "aa_atom": "///E/43/NZ", "dist": 3.235, "type": "po4:sidechain:salt-bridge" }, { "index": 349, "nt_atom": "///A/436/OP1", "aa_atom": "///Q/3/N", "dist": 3.166, "type": "po4:backbone" }, { "index": 350, "nt_atom": "///A/437/OP1", "aa_atom": "///Q/3/NH2", "dist": 2.939, "type": "po4:sidechain:salt-bridge" }, { "index": 351, "nt_atom": "///A/438/OP1", "aa_atom": "///Q/5/NZ", "dist": 2.829, "type": "po4:sidechain:salt-bridge" }, { "index": 352, "nt_atom": "///A/440/OP1", "aa_atom": "///E/78/O", "dist": 2.884, "type": "po4:backbone" }, { "index": 353, "nt_atom": "///A/441/OP1", "aa_atom": "///E/45/OE1", "dist": 3.069, "type": "po4:sidechain" }, { "index": 354, "nt_atom": "///A/442/OP1", "aa_atom": "///E/46/NZ", "dist": 3.462, "type": "po4:sidechain:salt-bridge" }, { "index": 355, "nt_atom": "///A/443/OP1", "aa_atom": "///E/52/N", "dist": 3.224, "type": "po4:backbone" }, { "index": 356, "nt_atom": "///A/450/OP1", "aa_atom": "///4/40/N", "dist": 2.968, "type": "po4:backbone" }, { "index": 357, "nt_atom": "///A/456/OP1", "aa_atom": "///4/12/NH1", "dist": 3.126, "type": "po4:sidechain:salt-bridge" }, { "index": 358, "nt_atom": "///A/455/O3'", "aa_atom": "///4/12/NH1", "dist": 3.486, "type": "po4:sidechain" }, { "index": 359, "nt_atom": "///A/458/OP1", "aa_atom": "///4/33/NE", "dist": 2.571, "type": "po4:sidechain:salt-bridge" }, { "index": 360, "nt_atom": "///A/458/OP1", "aa_atom": "///4/33/NH1", "dist": 3.360, "type": "po4:sidechain:salt-bridge" }, { "index": 361, "nt_atom": "///A/458/OP2", "aa_atom": "///4/34/NH1", "dist": 3.318, "type": "po4:sidechain:salt-bridge" }, { "index": 362, "nt_atom": "///A/457/O3'", "aa_atom": "///4/33/NH1", "dist": 3.131, "type": "po4:sidechain" }, { "index": 363, "nt_atom": "///A/459/OP2", "aa_atom": "///4/37/NZ", "dist": 2.845, "type": "po4:sidechain:salt-bridge" }, { "index": 364, "nt_atom": "///A/460/OP1", "aa_atom": "///E/54/N", "dist": 3.365, "type": "po4:backbone" }, { "index": 365, "nt_atom": "///A/461/OP1", "aa_atom": "///E/73/NH1", "dist": 2.466, "type": "po4:sidechain:salt-bridge" }, { "index": 366, "nt_atom": "///A/462/OP1", "aa_atom": "///E/78/NH2", "dist": 2.675, "type": "po4:sidechain:salt-bridge" }, { "index": 367, "nt_atom": "///A/471/OP1", "aa_atom": "///U/60/NZ", "dist": 3.624, "type": "po4:sidechain:salt-bridge" }, { "index": 368, "nt_atom": "///A/471/OP2", "aa_atom": "///U/43/NH1", "dist": 2.844, "type": "po4:sidechain:salt-bridge" }, { "index": 369, "nt_atom": "///A/472/OP2", "aa_atom": "///U/44/N", "dist": 3.205, "type": "po4:backbone" }, { "index": 370, "nt_atom": "///A/492/OP1", "aa_atom": "///U/16/NZ", "dist": 3.496, "type": "po4:sidechain:salt-bridge" }, { "index": 371, "nt_atom": "///A/509/OP1", "aa_atom": "///2/13/NH1", "dist": 3.872, "type": "po4:sidechain:salt-bridge" }, { "index": 372, "nt_atom": "///A/509/O5'", "aa_atom": "///S/18/NH1", "dist": 2.880, "type": "po4:sidechain" }, { "index": 373, "nt_atom": "///A/523/OP1", "aa_atom": "///Q/45/OH", "dist": 3.022, "type": "po4:sidechain" }, { "index": 374, "nt_atom": "///A/524/OP1", "aa_atom": "///Q/25/N", "dist": 2.836, "type": "po4:backbone" }, { "index": 375, "nt_atom": "///A/525/OP1", "aa_atom": "///Q/24/OH", "dist": 3.243, "type": "po4:sidechain" }, { "index": 376, "nt_atom": "///A/526/O3'", "aa_atom": "///Q/53/NE", "dist": 3.445, "type": "po4:sidechain" }, { "index": 377, "nt_atom": "///A/548/OP1", "aa_atom": "///J/113/N", "dist": 3.434, "type": "po4:backbone" }, { "index": 378, "nt_atom": "///A/549/OP1", "aa_atom": "///J/112/ND2", "dist": 3.091, "type": "po4:sidechain" }, { "index": 379, "nt_atom": "///A/553/OP2", "aa_atom": "///R/79/NH1", "dist": 3.386, "type": "po4:sidechain:salt-bridge" }, { "index": 380, "nt_atom": "///A/553/OP2", "aa_atom": "///R/79/NH2", "dist": 2.939, "type": "po4:sidechain:salt-bridge" }, { "index": 381, "nt_atom": "///A/555/OP2", "aa_atom": "///R/80/N", "dist": 2.758, "type": "po4:backbone" }, { "index": 382, "nt_atom": "///A/557/O3'", "aa_atom": "///L/36/NZ", "dist": 3.304, "type": "po4:sidechain" }, { "index": 383, "nt_atom": "///A/562/OP2", "aa_atom": "///R/79/NH1", "dist": 3.161, "type": "po4:sidechain:salt-bridge" }, { "index": 384, "nt_atom": "///A/562/OP2", "aa_atom": "///R/80/NH2", "dist": 3.037, "type": "po4:sidechain:salt-bridge" }, { "index": 385, "nt_atom": "///A/563/OP2", "aa_atom": "///R/80/NH2", "dist": 3.963, "type": "po4:sidechain:salt-bridge" }, { "index": 386, "nt_atom": "///A/571/OP1", "aa_atom": "///Q/33/N", "dist": 3.117, "type": "po4:backbone" }, { "index": 387, "nt_atom": "///A/574/OP1", "aa_atom": "///Q/6/N", "dist": 3.226, "type": "po4:backbone" }, { "index": 388, "nt_atom": "///A/577/OP2", "aa_atom": "///L/21/NH1", "dist": 2.394, "type": "po4:sidechain:salt-bridge" }, { "index": 389, "nt_atom": "///A/578/OP1", "aa_atom": "///L/16/NZ", "dist": 3.525, "type": "po4:sidechain:salt-bridge" }, { "index": 390, "nt_atom": "///A/580/OP1", "aa_atom": "///E/89/NE", "dist": 3.278, "type": "po4:sidechain:salt-bridge" }, { "index": 391, "nt_atom": "///A/589/O3'", "aa_atom": "///E/23/ND2", "dist": 3.387, "type": "po4:sidechain" }, { "index": 392, "nt_atom": "///A/596/OP2", "aa_atom": "///E/98/NZ", "dist": 3.339, "type": "po4:sidechain:salt-bridge" }, { "index": 393, "nt_atom": "///A/597/OP2", "aa_atom": "///E/97/N", "dist": 3.616, "type": "po4:backbone" }, { "index": 394, "nt_atom": "///A/607/OP1", "aa_atom": "///E/101/NE", "dist": 3.188, "type": "po4:sidechain:salt-bridge" }, { "index": 395, "nt_atom": "///A/607/OP1", "aa_atom": "///E/101/NH1", "dist": 3.285, "type": "po4:sidechain:salt-bridge" }, { "index": 396, "nt_atom": "///A/608/OP2", "aa_atom": "///E/101/NH1", "dist": 3.519, "type": "po4:sidechain:salt-bridge" }, { "index": 397, "nt_atom": "///A/612/OP1", "aa_atom": "///L/103/N", "dist": 3.456, "type": "po4:backbone" }, { "index": 398, "nt_atom": "///A/613/OP2", "aa_atom": "///L/102/ND2", "dist": 2.905, "type": "po4:sidechain" }, { "index": 399, "nt_atom": "///A/617/OP1", "aa_atom": "///L/78/NE", "dist": 2.913, "type": "po4:sidechain:salt-bridge" }, { "index": 400, "nt_atom": "///A/617/O5'", "aa_atom": "///L/78/NH2", "dist": 3.294, "type": "po4:sidechain" }, { "index": 401, "nt_atom": "///A/619/OP2", "aa_atom": "///5/18/N", "dist": 3.732, "type": "po4:backbone" }, { "index": 402, "nt_atom": "///A/621/OP2", "aa_atom": "///5/22/NZ", "dist": 3.491, "type": "po4:sidechain:salt-bridge" }, { "index": 403, "nt_atom": "///A/623/OP1", "aa_atom": "///L/68/OG", "dist": 3.123, "type": "po4:sidechain" }, { "index": 404, "nt_atom": "///A/624/OP2", "aa_atom": "///L/107/NH1", "dist": 2.410, "type": "po4:sidechain:salt-bridge" }, { "index": 405, "nt_atom": "///A/627/OP2", "aa_atom": "///L/112/N", "dist": 3.531, "type": "po4:backbone" }, { "index": 406, "nt_atom": "///A/627/OP2", "aa_atom": "///L/128/OG1", "dist": 3.319, "type": "po4:sidechain" }, { "index": 407, "nt_atom": "///A/649/OP1", "aa_atom": "///E/94/NZ", "dist": 3.640, "type": "po4:sidechain:salt-bridge" }, { "index": 408, "nt_atom": "///A/650/OP1", "aa_atom": "///E/94/N", "dist": 3.574, "type": "po4:backbone" }, { "index": 409, "nt_atom": "///A/656/OP1", "aa_atom": "///5/59/NH2", "dist": 3.512, "type": "po4:sidechain:salt-bridge" }, { "index": 410, "nt_atom": "///A/661/OP1", "aa_atom": "///L/43/N", "dist": 2.664, "type": "po4:backbone" }, { "index": 411, "nt_atom": "///A/661/OP2", "aa_atom": "///L/33/NH2", "dist": 3.583, "type": "po4:sidechain:salt-bridge" }, { "index": 412, "nt_atom": "///A/662/OP2", "aa_atom": "///L/42/OG", "dist": 3.290, "type": "po4:sidechain" }, { "index": 413, "nt_atom": "///A/663/OP1", "aa_atom": "///E/48/NH2", "dist": 2.382, "type": "po4:sidechain:salt-bridge" }, { "index": 414, "nt_atom": "///A/664/OP1", "aa_atom": "///E/48/NH1", "dist": 3.748, "type": "po4:sidechain:salt-bridge" }, { "index": 415, "nt_atom": "///A/664/OP2", "aa_atom": "///E/48/NH2", "dist": 3.746, "type": "po4:sidechain:salt-bridge" }, { "index": 416, "nt_atom": "///A/665/OP1", "aa_atom": "///E/57/NZ", "dist": 2.507, "type": "po4:sidechain:salt-bridge" }, { "index": 417, "nt_atom": "///A/665/O3'", "aa_atom": "///E/61/NE2", "dist": 3.290, "type": "po4:sidechain" }, { "index": 418, "nt_atom": "///A/672/O5'", "aa_atom": "///4/26/ND2", "dist": 2.670, "type": "po4:sidechain" }, { "index": 419, "nt_atom": "///A/681/OP1", "aa_atom": "///C/217/NH1", "dist": 2.598, "type": "po4:sidechain:salt-bridge" }, { "index": 420, "nt_atom": "///A/682/OP1", "aa_atom": "///C/56/N", "dist": 3.253, "type": "po4:backbone" }, { "index": 421, "nt_atom": "///A/684/OP2", "aa_atom": "///C/59/NZ", "dist": 3.376, "type": "po4:sidechain:salt-bridge" }, { "index": 422, "nt_atom": "///A/719/OP1", "aa_atom": "///C/12/N", "dist": 3.364, "type": "po4:backbone" }, { "index": 423, "nt_atom": "///A/719/OP2", "aa_atom": "///C/207/NZ", "dist": 3.188, "type": "po4:sidechain:salt-bridge" }, { "index": 424, "nt_atom": "///A/719/O5'", "aa_atom": "///C/207/NZ", "dist": 3.271, "type": "po4:sidechain" }, { "index": 425, "nt_atom": "///A/736/O3'", "aa_atom": "///S/90/NZ", "dist": 3.584, "type": "po4:sidechain" }, { "index": 426, "nt_atom": "///A/738/OP1", "aa_atom": "///S/88/NH1", "dist": 2.606, "type": "po4:sidechain:salt-bridge" }, { "index": 427, "nt_atom": "///A/738/OP2", "aa_atom": "///S/89/N", "dist": 3.273, "type": "po4:backbone" }, { "index": 428, "nt_atom": "///A/741/OP2", "aa_atom": "///S/90/N", "dist": 3.354, "type": "po4:backbone" }, { "index": 429, "nt_atom": "///A/742/OP1", "aa_atom": "///4/3/NH1", "dist": 3.370, "type": "po4:sidechain:salt-bridge" }, { "index": 430, "nt_atom": "///A/742/OP2", "aa_atom": "///4/3/NH2", "dist": 3.882, "type": "po4:sidechain:salt-bridge" }, { "index": 431, "nt_atom": "///A/761/OP1", "aa_atom": "///4/14/NH2", "dist": 3.019, "type": "po4:sidechain:salt-bridge" }, { "index": 432, "nt_atom": "///A/761/OP2", "aa_atom": "///4/11/NZ", "dist": 3.338, "type": "po4:sidechain:salt-bridge" }, { "index": 433, "nt_atom": "///A/760/O3'", "aa_atom": "///4/14/NH2", "dist": 3.275, "type": "po4:sidechain" }, { "index": 434, "nt_atom": "///A/764/OP1", "aa_atom": "///C/48/NH2", "dist": 3.546, "type": "po4:sidechain:salt-bridge" }, { "index": 435, "nt_atom": "///A/763/O3'", "aa_atom": "///C/48/NE", "dist": 3.740, "type": "po4:sidechain" }, { "index": 436, "nt_atom": "///A/769/OP1", "aa_atom": "///C/49/N", "dist": 2.985, "type": "po4:backbone" }, { "index": 437, "nt_atom": "///A/771/OP1", "aa_atom": "///C/217/NH2", "dist": 2.447, "type": "po4:sidechain:salt-bridge" }, { "index": 438, "nt_atom": "///A/796/OP2", "aa_atom": "///L/41/NE", "dist": 3.155, "type": "po4:sidechain:salt-bridge" }, { "index": 439, "nt_atom": "///A/796/OP2", "aa_atom": "///L/41/NH2", "dist": 2.748, "type": "po4:sidechain:salt-bridge" }, { "index": 440, "nt_atom": "///A/797/OP1", "aa_atom": "///L/36/NZ", "dist": 3.468, "type": "po4:sidechain:salt-bridge" }, { "index": 441, "nt_atom": "///A/797/OP2", "aa_atom": "///L/41/NH2", "dist": 3.107, "type": "po4:sidechain:salt-bridge" }, { "index": 442, "nt_atom": "///A/801/OP2", "aa_atom": "///L/29/N", "dist": 2.943, "type": "po4:backbone" }, { "index": 443, "nt_atom": "///A/803/OP2", "aa_atom": "///L/23/N", "dist": 3.423, "type": "po4:backbone" }, { "index": 444, "nt_atom": "///A/803/OP2", "aa_atom": "///L/24/N", "dist": 3.102, "type": "po4:backbone" }, { "index": 445, "nt_atom": "///A/804/OP1", "aa_atom": "///R/86/N", "dist": 2.826, "type": "po4:backbone" }, { "index": 446, "nt_atom": "///A/822/OP1", "aa_atom": "///L/38/N", "dist": 3.163, "type": "po4:backbone" }, { "index": 447, "nt_atom": "///A/822/OP1", "aa_atom": "///L/39/N", "dist": 3.598, "type": "po4:backbone" }, { "index": 448, "nt_atom": "///A/821/O3'", "aa_atom": "///L/38/N", "dist": 3.450, "type": "po4:backbone" }, { "index": 449, "nt_atom": "///A/824/O5'", "aa_atom": "///5/56/NH2", "dist": 3.068, "type": "po4:sidechain" }, { "index": 450, "nt_atom": "///A/853/O5'", "aa_atom": "///M/23/NH1", "dist": 3.884, "type": "po4:sidechain" }, { "index": 451, "nt_atom": "///A/854/OP2", "aa_atom": "///M/23/NH1", "dist": 2.383, "type": "po4:sidechain:salt-bridge" }, { "index": 452, "nt_atom": "///A/860/OP1", "aa_atom": "///M/5/N", "dist": 3.642, "type": "po4:backbone" }, { "index": 453, "nt_atom": "///A/863/OP1", "aa_atom": "///M/63/NZ", "dist": 3.541, "type": "po4:sidechain:salt-bridge" }, { "index": 454, "nt_atom": "///A/862/O3'", "aa_atom": "///M/63/NZ", "dist": 3.428, "type": "po4:sidechain" }, { "index": 455, "nt_atom": "///A/896/OP2", "aa_atom": "///M/23/NH2", "dist": 3.441, "type": "po4:sidechain:salt-bridge" }, { "index": 456, "nt_atom": "///A/920/OP2", "aa_atom": "///Z/29/NH1", "dist": 2.685, "type": "po4:sidechain:salt-bridge" }, { "index": 457, "nt_atom": "///A/932/OP1", "aa_atom": "///L/33/O", "dist": 3.197, "type": "po4:backbone" }, { "index": 458, "nt_atom": "///A/943/OP2", "aa_atom": "///M/18/NH1", "dist": 3.119, "type": "po4:sidechain:salt-bridge" }, { "index": 459, "nt_atom": "///A/943/OP2", "aa_atom": "///M/18/NH2", "dist": 2.784, "type": "po4:sidechain:salt-bridge" }, { "index": 460, "nt_atom": "///A/944/OP1", "aa_atom": "///M/15/N", "dist": 3.121, "type": "po4:backbone" }, { "index": 461, "nt_atom": "///A/945/OP1", "aa_atom": "///M/87/NZ", "dist": 2.924, "type": "po4:sidechain:salt-bridge" }, { "index": 462, "nt_atom": "///A/945/OP2", "aa_atom": "///M/14/OG1", "dist": 3.491, "type": "po4:sidechain" }, { "index": 463, "nt_atom": "///A/946/OP1", "aa_atom": "///M/88/N", "dist": 3.789, "type": "po4:backbone" }, { "index": 464, "nt_atom": "///A/947/OP1", "aa_atom": "///M/77/N", "dist": 3.081, "type": "po4:backbone" }, { "index": 465, "nt_atom": "///A/948/OP1", "aa_atom": "///M/41/NH1", "dist": 3.307, "type": "po4:sidechain:salt-bridge" }, { "index": 466, "nt_atom": "///A/967/OP1", "aa_atom": "///Q/55/NH1", "dist": 3.571, "type": "po4:sidechain:salt-bridge" }, { "index": 467, "nt_atom": "///A/978/OP2", "aa_atom": "///Z/11/OG", "dist": 2.809, "type": "po4:sidechain" }, { "index": 468, "nt_atom": "///A/979/OP2", "aa_atom": "///Z/13/ND2", "dist": 2.744, "type": "po4:sidechain" }, { "index": 469, "nt_atom": "///A/982/OP1", "aa_atom": "///Q/47/OH", "dist": 2.576, "type": "po4:sidechain" }, { "index": 470, "nt_atom": "///A/982/OP1", "aa_atom": "///R/76/NZ", "dist": 3.275, "type": "po4:sidechain:salt-bridge" }, { "index": 471, "nt_atom": "///A/981/O3'", "aa_atom": "///R/76/NZ", "dist": 3.179, "type": "po4:sidechain" }, { "index": 472, "nt_atom": "///A/983/OP1", "aa_atom": "///Q/50/NE", "dist": 2.756, "type": "po4:sidechain:salt-bridge" }, { "index": 473, "nt_atom": "///A/983/OP1", "aa_atom": "///Q/50/NH2", "dist": 3.192, "type": "po4:sidechain:salt-bridge" }, { "index": 474, "nt_atom": "///A/984/OP2", "aa_atom": "///Q/54/NZ", "dist": 3.583, "type": "po4:sidechain:salt-bridge" }, { "index": 475, "nt_atom": "///A/985/OP1", "aa_atom": "///Q/53/NH1", "dist": 3.192, "type": "po4:sidechain:salt-bridge" }, { "index": 476, "nt_atom": "///A/985/OP2", "aa_atom": "///Q/54/NZ", "dist": 3.026, "type": "po4:sidechain:salt-bridge" }, { "index": 477, "nt_atom": "///A/986/OP2", "aa_atom": "///Q/93/NZ", "dist": 2.572, "type": "po4:sidechain:salt-bridge" }, { "index": 478, "nt_atom": "///A/987/OP1", "aa_atom": "///Q/92/N", "dist": 3.286, "type": "po4:backbone" }, { "index": 479, "nt_atom": "///A/987/OP2", "aa_atom": "///Q/58/NH1", "dist": 3.174, "type": "po4:sidechain:salt-bridge" }, { "index": 480, "nt_atom": "///A/988/OP1", "aa_atom": "///Q/84/NZ", "dist": 2.322, "type": "po4:sidechain:salt-bridge" }, { "index": 481, "nt_atom": "///A/988/OP1", "aa_atom": "///Q/92/NH1", "dist": 3.261, "type": "po4:sidechain:salt-bridge" }, { "index": 482, "nt_atom": "///A/988/OP2", "aa_atom": "///Q/58/NH2", "dist": 3.475, "type": "po4:sidechain:salt-bridge" }, { "index": 483, "nt_atom": "///A/988/OP2", "aa_atom": "///Q/92/NH1", "dist": 2.930, "type": "po4:sidechain:salt-bridge" }, { "index": 484, "nt_atom": "///A/997/OP1", "aa_atom": "///J/37/NH2", "dist": 2.656, "type": "po4:sidechain:salt-bridge" }, { "index": 485, "nt_atom": "///A/997/OP1", "aa_atom": "///J/39/NZ", "dist": 2.854, "type": "po4:sidechain:salt-bridge" }, { "index": 486, "nt_atom": "///A/998/OP2", "aa_atom": "///J/37/NH1", "dist": 3.083, "type": "po4:sidechain:salt-bridge" }, { "index": 487, "nt_atom": "///A/999/OP1", "aa_atom": "///J/39/NZ", "dist": 3.246, "type": "po4:sidechain:salt-bridge" }, { "index": 488, "nt_atom": "///A/1000/OP1", "aa_atom": "///Q/66/ND2", "dist": 2.837, "type": "po4:sidechain" }, { "index": 489, "nt_atom": "///A/1001/OP1", "aa_atom": "///Q/77/N", "dist": 3.225, "type": "po4:backbone" }, { "index": 490, "nt_atom": "///A/1001/OP1", "aa_atom": "///Q/77/OG", "dist": 3.024, "type": "po4:sidechain" }, { "index": 491, "nt_atom": "///A/1001/OP2", "aa_atom": "///Q/66/ND2", "dist": 3.125, "type": "po4:sidechain" }, { "index": 492, "nt_atom": "///A/1001/OP2", "aa_atom": "///Q/70/NH1", "dist": 3.392, "type": "po4:sidechain:salt-bridge" }, { "index": 493, "nt_atom": "///A/1002/OP2", "aa_atom": "///Q/70/NH1", "dist": 2.915, "type": "po4:sidechain:salt-bridge" }, { "index": 494, "nt_atom": "///A/1030/OP1", "aa_atom": "///V/48/NH2", "dist": 2.918, "type": "po4:sidechain:salt-bridge" }, { "index": 495, "nt_atom": "///A/1029/O3'", "aa_atom": "///V/48/NH2", "dist": 2.773, "type": "po4:sidechain" }, { "index": 496, "nt_atom": "///A/1047/OP1", "aa_atom": "///I/6/NE2", "dist": 2.454, "type": "po4:sidechain" }, { "index": 497, "nt_atom": "///A/1050/OP1", "aa_atom": "///I/76/N", "dist": 2.660, "type": "po4:backbone" }, { "index": 498, "nt_atom": "///A/1050/OP1", "aa_atom": "///I/77/N", "dist": 2.583, "type": "po4:backbone" }, { "index": 499, "nt_atom": "///A/1049/O3'", "aa_atom": "///I/72/NZ", "dist": 3.173, "type": "po4:sidechain" }, { "index": 500, "nt_atom": "///A/1053/O3'", "aa_atom": "///I/89/N", "dist": 3.738, "type": "po4:backbone" }, { "index": 501, "nt_atom": "///A/1058/OP1", "aa_atom": "///I/22/O", "dist": 2.940, "type": "po4:backbone" }, { "index": 502, "nt_atom": "///A/1066/OP1", "aa_atom": "///I/92/NH1", "dist": 2.735, "type": "po4:sidechain:salt-bridge" }, { "index": 503, "nt_atom": "///A/1066/OP1", "aa_atom": "///I/92/NH2", "dist": 2.938, "type": "po4:sidechain:salt-bridge" }, { "index": 504, "nt_atom": "///A/1066/O3'", "aa_atom": "///I/92/NH2", "dist": 2.625, "type": "po4:sidechain" }, { "index": 505, "nt_atom": "///A/1068/OP2", "aa_atom": "///I/134/NH2", "dist": 2.853, "type": "po4:sidechain:salt-bridge" }, { "index": 506, "nt_atom": "///A/1088/OP1", "aa_atom": "///I/10/N", "dist": 3.047, "type": "po4:backbone" }, { "index": 507, "nt_atom": "///A/1088/OP1", "aa_atom": "///I/10/NZ", "dist": 3.323, "type": "po4:sidechain:salt-bridge" }, { "index": 508, "nt_atom": "///A/1088/OP2", "aa_atom": "///I/10/NZ", "dist": 2.588, "type": "po4:sidechain:salt-bridge" }, { "index": 509, "nt_atom": "///A/1089/OP1", "aa_atom": "///I/6/O", "dist": 3.092, "type": "po4:backbone" }, { "index": 510, "nt_atom": "///A/1121/OP1", "aa_atom": "///J/82/N", "dist": 3.015, "type": "po4:backbone" }, { "index": 511, "nt_atom": "///A/1129/OP2", "aa_atom": "///J/72/NZ", "dist": 3.014, "type": "po4:sidechain:salt-bridge" }, { "index": 512, "nt_atom": "///A/1130/OP1", "aa_atom": "///J/26/N", "dist": 3.426, "type": "po4:backbone" }, { "index": 513, "nt_atom": "///A/1129/O3'", "aa_atom": "///J/26/N", "dist": 3.351, "type": "po4:backbone" }, { "index": 514, "nt_atom": "///A/1131/OP1", "aa_atom": "///J/27/NE", "dist": 3.494, "type": "po4:sidechain:salt-bridge" }, { "index": 515, "nt_atom": "///A/1131/OP2", "aa_atom": "///J/65/OG1", "dist": 3.057, "type": "po4:sidechain" }, { "index": 516, "nt_atom": "///A/1130/O3'", "aa_atom": "///J/27/NE", "dist": 3.490, "type": "po4:sidechain" }, { "index": 517, "nt_atom": "///A/1134/OP1", "aa_atom": "///J/27/NH2", "dist": 3.253, "type": "po4:sidechain:salt-bridge" }, { "index": 518, "nt_atom": "///A/1144/OP1", "aa_atom": "///Q/76/OH", "dist": 3.263, "type": "po4:sidechain" }, { "index": 519, "nt_atom": "///A/1144/OP1", "aa_atom": "///Q/92/NH2", "dist": 2.405, "type": "po4:sidechain:salt-bridge" }, { "index": 520, "nt_atom": "///A/1150/OP1", "aa_atom": "///Z/30/NH2", "dist": 3.408, "type": "po4:sidechain:salt-bridge" }, { "index": 521, "nt_atom": "///A/1154/OP1", "aa_atom": "///R/24/NZ", "dist": 2.445, "type": "po4:sidechain:salt-bridge" }, { "index": 522, "nt_atom": "///A/1171/OP1", "aa_atom": "///Z/29/NE", "dist": 2.511, "type": "po4:sidechain:salt-bridge" }, { "index": 523, "nt_atom": "///A/1171/OP1", "aa_atom": "///Z/29/NH1", "dist": 2.921, "type": "po4:sidechain:salt-bridge" }, { "index": 524, "nt_atom": "///A/1174/OP1", "aa_atom": "///R/85/NZ", "dist": 2.564, "type": "po4:sidechain:salt-bridge" }, { "index": 525, "nt_atom": "///A/1180/OP2", "aa_atom": "///L/14/NH2", "dist": 2.888, "type": "po4:sidechain:salt-bridge" }, { "index": 526, "nt_atom": "///A/1203/OP1", "aa_atom": "///Q/11/NH1", "dist": 3.217, "type": "po4:sidechain:salt-bridge" }, { "index": 527, "nt_atom": "///A/1204/OP1", "aa_atom": "///Q/15/NZ", "dist": 3.638, "type": "po4:sidechain:salt-bridge" }, { "index": 528, "nt_atom": "///A/1206/OP2", "aa_atom": "///Q/19/NZ", "dist": 3.101, "type": "po4:sidechain:salt-bridge" }, { "index": 529, "nt_atom": "///A/1210/OP1", "aa_atom": "///R/68/NH2", "dist": 3.154, "type": "po4:sidechain:salt-bridge" }, { "index": 530, "nt_atom": "///A/1210/OP2", "aa_atom": "///R/90/NH1", "dist": 3.061, "type": "po4:sidechain:salt-bridge" }, { "index": 531, "nt_atom": "///A/1211/OP2", "aa_atom": "///R/68/NH1", "dist": 3.177, "type": "po4:sidechain:salt-bridge" }, { "index": 532, "nt_atom": "///A/1215/OP2", "aa_atom": "///Q/12/NH1", "dist": 2.937, "type": "po4:sidechain:salt-bridge" }, { "index": 533, "nt_atom": "///A/1230/O3'", "aa_atom": "///L/7/NH2", "dist": 3.404, "type": "po4:sidechain" }, { "index": 534, "nt_atom": "///A/1231/O3'", "aa_atom": "///E/28/NE2", "dist": 2.980, "type": "po4:sidechain" }, { "index": 535, "nt_atom": "///A/1234/OP1", "aa_atom": "///E/89/NH2", "dist": 3.110, "type": "po4:sidechain:salt-bridge" }, { "index": 536, "nt_atom": "///A/1233/O3'", "aa_atom": "///E/39/NH2", "dist": 3.763, "type": "po4:sidechain" }, { "index": 537, "nt_atom": "///A/1235/OP1", "aa_atom": "///E/43/NZ", "dist": 3.155, "type": "po4:sidechain:salt-bridge" }, { "index": 538, "nt_atom": "///A/1235/OP1", "aa_atom": "///Q/2/N", "dist": 3.451, "type": "po4:backbone" }, { "index": 539, "nt_atom": "///A/1237/OP2", "aa_atom": "///L/21/NE", "dist": 3.387, "type": "po4:sidechain:salt-bridge" }, { "index": 540, "nt_atom": "///A/1237/OP2", "aa_atom": "///L/21/NH2", "dist": 3.080, "type": "po4:sidechain:salt-bridge" }, { "index": 541, "nt_atom": "///A/1238/OP1", "aa_atom": "///Q/13/NH1", "dist": 2.585, "type": "po4:sidechain:salt-bridge" }, { "index": 542, "nt_atom": "///A/1238/OP1", "aa_atom": "///Q/13/NH2", "dist": 2.948, "type": "po4:sidechain:salt-bridge" }, { "index": 543, "nt_atom": "///A/1238/OP2", "aa_atom": "///Q/6/NH2", "dist": 2.851, "type": "po4:sidechain:salt-bridge" }, { "index": 544, "nt_atom": "///A/1238/O5'", "aa_atom": "///Q/13/NH1", "dist": 2.967, "type": "po4:sidechain" }, { "index": 545, "nt_atom": "///A/1239/OP2", "aa_atom": "///Q/13/NH1", "dist": 3.863, "type": "po4:sidechain:salt-bridge" }, { "index": 546, "nt_atom": "///A/1245/OP1", "aa_atom": "///E/66/NH2", "dist": 3.691, "type": "po4:sidechain:salt-bridge" }, { "index": 547, "nt_atom": "///A/1249/OP2", "aa_atom": "///S/99/NH2", "dist": 3.601, "type": "po4:sidechain:salt-bridge" }, { "index": 548, "nt_atom": "///A/1251/OP1", "aa_atom": "///2/16/NH1", "dist": 2.379, "type": "po4:sidechain:salt-bridge" }, { "index": 549, "nt_atom": "///A/1253/OP1", "aa_atom": "///2/16/NH2", "dist": 2.343, "type": "po4:sidechain:salt-bridge" }, { "index": 550, "nt_atom": "///A/1253/OP2", "aa_atom": "///S/15/NE2", "dist": 3.119, "type": "po4:sidechain" }, { "index": 551, "nt_atom": "///A/1253/OP2", "aa_atom": "///2/17/NH2", "dist": 2.801, "type": "po4:sidechain:salt-bridge" }, { "index": 552, "nt_atom": "///A/1264/OP1", "aa_atom": "///N/12/NH1", "dist": 3.576, "type": "po4:sidechain:salt-bridge" }, { "index": 553, "nt_atom": "///A/1263/O3'", "aa_atom": "///N/12/NH1", "dist": 3.269, "type": "po4:sidechain" }, { "index": 554, "nt_atom": "///A/1266/OP1", "aa_atom": "///N/35/N", "dist": 3.158, "type": "po4:backbone" }, { "index": 555, "nt_atom": "///A/1274/OP1", "aa_atom": "///N/105/N", "dist": 3.396, "type": "po4:backbone" }, { "index": 556, "nt_atom": "///A/1296/OP1", "aa_atom": "///4/9/OG1", "dist": 3.087, "type": "po4:sidechain" }, { "index": 557, "nt_atom": "///A/1322/O5'", "aa_atom": "///T/67/NZ", "dist": 3.461, "type": "po4:sidechain" }, { "index": 558, "nt_atom": "///A/1323/OP2", "aa_atom": "///T/67/NZ", "dist": 2.620, "type": "po4:sidechain:salt-bridge" }, { "index": 559, "nt_atom": "///A/1327/OP1", "aa_atom": "///T/18/NZ", "dist": 3.052, "type": "po4:sidechain:salt-bridge" }, { "index": 560, "nt_atom": "///A/1327/OP1", "aa_atom": "///T/83/OH", "dist": 2.520, "type": "po4:sidechain" }, { "index": 561, "nt_atom": "///A/1327/OP2", "aa_atom": "///T/81/NZ", "dist": 3.415, "type": "po4:sidechain:salt-bridge" }, { "index": 562, "nt_atom": "///A/1329/OP1", "aa_atom": "///T/39/NZ", "dist": 2.869, "type": "po4:sidechain:salt-bridge" }, { "index": 563, "nt_atom": "///A/1341/OP1", "aa_atom": "///C/36/NZ", "dist": 3.411, "type": "po4:sidechain:salt-bridge" }, { "index": 564, "nt_atom": "///A/1351/OP2", "aa_atom": "///X/50/NH1", "dist": 2.512, "type": "po4:sidechain:salt-bridge" }, { "index": 565, "nt_atom": "///A/1352/OP1", "aa_atom": "///X/3/NH2", "dist": 2.369, "type": "po4:sidechain:salt-bridge" }, { "index": 566, "nt_atom": "///A/1352/OP1", "aa_atom": "///X/28/NH2", "dist": 2.783, "type": "po4:sidechain:salt-bridge" }, { "index": 567, "nt_atom": "///A/1352/OP2", "aa_atom": "///X/3/N", "dist": 3.002, "type": "po4:backbone" }, { "index": 568, "nt_atom": "///A/1352/O5'", "aa_atom": "///X/28/NH2", "dist": 2.660, "type": "po4:sidechain" }, { "index": 569, "nt_atom": "///A/1353/OP1", "aa_atom": "///X/2/OG", "dist": 3.342, "type": "po4:sidechain" }, { "index": 570, "nt_atom": "///A/1354/O3'", "aa_atom": "///4/25/NZ", "dist": 3.660, "type": "po4:sidechain" }, { "index": 571, "nt_atom": "///A/1357/O3'", "aa_atom": "///C/45/ND2", "dist": 3.324, "type": "po4:sidechain" }, { "index": 572, "nt_atom": "///A/1364/O3'", "aa_atom": "///4/14/NH1", "dist": 3.596, "type": "po4:sidechain" }, { "index": 573, "nt_atom": "///A/1385/OP1", "aa_atom": "///T/56/NH1", "dist": 3.285, "type": "po4:sidechain:salt-bridge" }, { "index": 574, "nt_atom": "///A/1386/OP2", "aa_atom": "///T/56/NH2", "dist": 2.548, "type": "po4:sidechain:salt-bridge" }, { "index": 575, "nt_atom": "///A/1385/O3'", "aa_atom": "///T/28/NE2", "dist": 3.436, "type": "po4:sidechain" }, { "index": 576, "nt_atom": "///A/1385/O3'", "aa_atom": "///T/56/NH2", "dist": 3.428, "type": "po4:sidechain" }, { "index": 577, "nt_atom": "///A/1488/OP1", "aa_atom": "///C/101/NH2", "dist": 2.749, "type": "po4:sidechain:salt-bridge" }, { "index": 578, "nt_atom": "///A/1555/O5'", "aa_atom": "///C/18/NZ", "dist": 2.939, "type": "po4:sidechain" }, { "index": 579, "nt_atom": "///A/1556/OP1", "aa_atom": "///C/214/NH2", "dist": 3.706, "type": "po4:sidechain:salt-bridge" }, { "index": 580, "nt_atom": "///A/1557/OP1", "aa_atom": "///C/60/NE2", "dist": 2.998, "type": "po4:sidechain" }, { "index": 581, "nt_atom": "///A/1557/OP2", "aa_atom": "///C/83/OH", "dist": 3.351, "type": "po4:sidechain" }, { "index": 582, "nt_atom": "///A/1558/OP1", "aa_atom": "///C/61/N", "dist": 3.437, "type": "po4:backbone" }, { "index": 583, "nt_atom": "///A/1558/OP1", "aa_atom": "///C/63/NH1", "dist": 2.852, "type": "po4:sidechain:salt-bridge" }, { "index": 584, "nt_atom": "///A/1559/O3'", "aa_atom": "///C/61/NE2", "dist": 3.348, "type": "po4:sidechain" }, { "index": 585, "nt_atom": "///A/1589/OP1", "aa_atom": "///T/39/N", "dist": 3.045, "type": "po4:backbone" }, { "index": 586, "nt_atom": "///A/1590/OP1", "aa_atom": "///T/61/ND2", "dist": 3.757, "type": "po4:sidechain" }, { "index": 587, "nt_atom": "///A/1591/OP1", "aa_atom": "///T/63/NZ", "dist": 3.441, "type": "po4:sidechain:salt-bridge" }, { "index": 588, "nt_atom": "///A/1591/OP2", "aa_atom": "///T/61/ND2", "dist": 2.955, "type": "po4:sidechain" }, { "index": 589, "nt_atom": "///A/1641/OP2", "aa_atom": "///N/40/NZ", "dist": 2.498, "type": "po4:sidechain:salt-bridge" }, { "index": 590, "nt_atom": "///A/1642/OP1", "aa_atom": "///N/8/NH1", "dist": 2.653, "type": "po4:sidechain:salt-bridge" }, { "index": 591, "nt_atom": "///A/1644/OP2", "aa_atom": "///N/1/N", "dist": 3.193, "type": "po4:backbone" }, { "index": 592, "nt_atom": "///A/1646/OP1", "aa_atom": "///D/141/NE", "dist": 3.337, "type": "po4:sidechain:salt-bridge" }, { "index": 593, "nt_atom": "///A/1647/OP1", "aa_atom": "///D/140/N", "dist": 3.207, "type": "po4:backbone" }, { "index": 594, "nt_atom": "///A/1647/OP1", "aa_atom": "///D/141/N", "dist": 2.817, "type": "po4:backbone" }, { "index": 595, "nt_atom": "///A/1647/O3'", "aa_atom": "///D/138/O", "dist": 3.220, "type": "po4:backbone" }, { "index": 596, "nt_atom": "///A/1656/OP1", "aa_atom": "///K/82/ND2", "dist": 3.918, "type": "po4:sidechain" }, { "index": 597, "nt_atom": "///A/1657/OP1", "aa_atom": "///K/7/N", "dist": 2.637, "type": "po4:backbone" }, { "index": 598, "nt_atom": "///A/1740/OP1", "aa_atom": "///P/94/NH1", "dist": 3.009, "type": "po4:sidechain:salt-bridge" }, { "index": 599, "nt_atom": "///A/1774/OP1", "aa_atom": "///C/238/NH2", "dist": 3.013, "type": "po4:sidechain:salt-bridge" }, { "index": 600, "nt_atom": "///A/1775/OP1", "aa_atom": "///C/221/NH2", "dist": 3.043, "type": "po4:sidechain:salt-bridge" }, { "index": 601, "nt_atom": "///A/1776/OP1", "aa_atom": "///C/221/N", "dist": 3.165, "type": "po4:backbone" }, { "index": 602, "nt_atom": "///A/1776/OP2", "aa_atom": "///C/221/NH1", "dist": 2.405, "type": "po4:sidechain:salt-bridge" }, { "index": 603, "nt_atom": "///A/1777/OP1", "aa_atom": "///C/219/N", "dist": 3.164, "type": "po4:backbone" }, { "index": 604, "nt_atom": "///A/1777/OP2", "aa_atom": "///C/219/O", "dist": 3.338, "type": "po4:backbone" }, { "index": 605, "nt_atom": "///A/1778/OP1", "aa_atom": "///C/211/OG1", "dist": 3.591, "type": "po4:sidechain" }, { "index": 606, "nt_atom": "///A/1779/OP1", "aa_atom": "///C/205/N", "dist": 3.193, "type": "po4:backbone" }, { "index": 607, "nt_atom": "///A/1784/OP1", "aa_atom": "///C/271/NH2", "dist": 3.568, "type": "po4:sidechain:salt-bridge" }, { "index": 608, "nt_atom": "///A/1784/OP2", "aa_atom": "///C/272/NH1", "dist": 2.987, "type": "po4:sidechain:salt-bridge" }, { "index": 609, "nt_atom": "///A/1785/OP1", "aa_atom": "///C/257/NZ", "dist": 2.958, "type": "po4:sidechain:salt-bridge" }, { "index": 610, "nt_atom": "///A/1785/OP1", "aa_atom": "///C/258/N", "dist": 3.339, "type": "po4:backbone" }, { "index": 611, "nt_atom": "///A/1785/OP2", "aa_atom": "///C/257/NZ", "dist": 2.799, "type": "po4:sidechain:salt-bridge" }, { "index": 612, "nt_atom": "///A/1785/OP2", "aa_atom": "///C/271/NH2", "dist": 3.532, "type": "po4:sidechain:salt-bridge" }, { "index": 613, "nt_atom": "///A/1786/OP1", "aa_atom": "///C/259/NH1", "dist": 2.373, "type": "po4:sidechain:salt-bridge" }, { "index": 614, "nt_atom": "///A/1787/OP1", "aa_atom": "///C/259/NH1", "dist": 3.176, "type": "po4:sidechain:salt-bridge" }, { "index": 615, "nt_atom": "///A/1787/OP1", "aa_atom": "///C/264/OG1", "dist": 3.523, "type": "po4:sidechain" }, { "index": 616, "nt_atom": "///A/1787/OP2", "aa_atom": "///C/182/NH1", "dist": 3.026, "type": "po4:sidechain:salt-bridge" }, { "index": 617, "nt_atom": "///A/1787/OP2", "aa_atom": "///C/182/NH2", "dist": 2.942, "type": "po4:sidechain:salt-bridge" }, { "index": 618, "nt_atom": "///A/1788/OP2", "aa_atom": "///C/150/NZ", "dist": 2.912, "type": "po4:sidechain:salt-bridge" }, { "index": 619, "nt_atom": "///A/1803/OP1", "aa_atom": "///C/37/NZ", "dist": 3.422, "type": "po4:sidechain:salt-bridge" }, { "index": 620, "nt_atom": "///A/1804/OP1", "aa_atom": "///C/62/OH", "dist": 3.023, "type": "po4:sidechain" }, { "index": 621, "nt_atom": "///A/1804/OP1", "aa_atom": "///C/87/NH2", "dist": 2.613, "type": "po4:sidechain:salt-bridge" }, { "index": 622, "nt_atom": "///A/1804/O5'", "aa_atom": "///C/156/NH2", "dist": 3.410, "type": "po4:sidechain" }, { "index": 623, "nt_atom": "///A/1805/OP2", "aa_atom": "///C/87/NH1", "dist": 2.774, "type": "po4:sidechain:salt-bridge" }, { "index": 624, "nt_atom": "///A/1805/OP2", "aa_atom": "///C/156/NE", "dist": 2.981, "type": "po4:sidechain:salt-bridge" }, { "index": 625, "nt_atom": "///A/1805/OP2", "aa_atom": "///C/156/NH2", "dist": 2.642, "type": "po4:sidechain:salt-bridge" }, { "index": 626, "nt_atom": "///A/1806/OP1", "aa_atom": "///C/156/N", "dist": 3.301, "type": "po4:backbone" }, { "index": 627, "nt_atom": "///A/1806/OP1", "aa_atom": "///C/157/N", "dist": 3.265, "type": "po4:backbone" }, { "index": 628, "nt_atom": "///A/1806/OP1", "aa_atom": "///C/157/OG", "dist": 2.951, "type": "po4:sidechain" }, { "index": 629, "nt_atom": "///A/1806/OP2", "aa_atom": "///C/155/N", "dist": 3.054, "type": "po4:backbone" }, { "index": 630, "nt_atom": "///A/1807/OP1", "aa_atom": "///C/177/NE", "dist": 3.559, "type": "po4:sidechain:salt-bridge" }, { "index": 631, "nt_atom": "///A/1812/OP1", "aa_atom": "///C/230/NE2", "dist": 2.850, "type": "po4:sidechain:salt-bridge" }, { "index": 632, "nt_atom": "///A/1813/OP1", "aa_atom": "///C/223/N", "dist": 3.099, "type": "po4:backbone" }, { "index": 633, "nt_atom": "///A/1813/OP2", "aa_atom": "///C/222/N", "dist": 3.038, "type": "po4:backbone" }, { "index": 634, "nt_atom": "///A/1831/OP1", "aa_atom": "///C/257/N", "dist": 3.863, "type": "po4:backbone" }, { "index": 635, "nt_atom": "///A/1888/OP2", "aa_atom": "///C/254/NZ", "dist": 2.736, "type": "po4:sidechain:salt-bridge" }, { "index": 636, "nt_atom": "///A/1890/OP1", "aa_atom": "///C/240/OG", "dist": 2.414, "type": "po4:sidechain" }, { "index": 637, "nt_atom": "///A/1938/OP1", "aa_atom": "///K/54/NZ", "dist": 3.634, "type": "po4:sidechain:salt-bridge" }, { "index": 638, "nt_atom": "///A/1939/OP1", "aa_atom": "///K/42/OG1", "dist": 2.943, "type": "po4:sidechain" }, { "index": 639, "nt_atom": "///A/1939/OP1", "aa_atom": "///K/44/NZ", "dist": 3.168, "type": "po4:sidechain:salt-bridge" }, { "index": 640, "nt_atom": "///A/1981/OP2", "aa_atom": "///D/132/ND2", "dist": 3.164, "type": "po4:sidechain" }, { "index": 641, "nt_atom": "///A/1984/OP2", "aa_atom": "///D/129/N", "dist": 3.710, "type": "po4:backbone" }, { "index": 642, "nt_atom": "///A/1985/OP2", "aa_atom": "///D/141/NH1", "dist": 3.172, "type": "po4:sidechain:salt-bridge" }, { "index": 643, "nt_atom": "///A/1988/OP1", "aa_atom": "///N/9/NE2", "dist": 3.344, "type": "po4:sidechain:salt-bridge" }, { "index": 644, "nt_atom": "///A/1989/OP1", "aa_atom": "///N/17/NH2", "dist": 2.734, "type": "po4:sidechain:salt-bridge" }, { "index": 645, "nt_atom": "///A/1996/OP1", "aa_atom": "///S/41/NZ", "dist": 2.818, "type": "po4:sidechain:salt-bridge" }, { "index": 646, "nt_atom": "///A/1997/OP1", "aa_atom": "///S/42/N", "dist": 3.076, "type": "po4:backbone" }, { "index": 647, "nt_atom": "///A/1998/OP1", "aa_atom": "///S/42/NZ", "dist": 3.097, "type": "po4:sidechain:salt-bridge" }, { "index": 648, "nt_atom": "///A/1999/OP1", "aa_atom": "///S/11/NH1", "dist": 2.708, "type": "po4:sidechain:salt-bridge" }, { "index": 649, "nt_atom": "///A/1998/O3'", "aa_atom": "///S/11/NH1", "dist": 3.166, "type": "po4:sidechain" }, { "index": 650, "nt_atom": "///A/2000/OP1", "aa_atom": "///S/97/N", "dist": 3.296, "type": "po4:backbone" }, { "index": 651, "nt_atom": "///A/2007/OP1", "aa_atom": "///Q/27/N", "dist": 3.625, "type": "po4:backbone" }, { "index": 652, "nt_atom": "///A/2008/OP1", "aa_atom": "///Q/25/OH", "dist": 2.541, "type": "po4:sidechain" }, { "index": 653, "nt_atom": "///A/2008/OP1", "aa_atom": "///2/9/OG", "dist": 2.903, "type": "po4:sidechain" }, { "index": 654, "nt_atom": "///A/2007/O3'", "aa_atom": "///Q/25/OH", "dist": 3.564, "type": "po4:sidechain" }, { "index": 655, "nt_atom": "///A/2039/OP1", "aa_atom": "///D/146/N", "dist": 3.295, "type": "po4:backbone" }, { "index": 656, "nt_atom": "///A/2042/OP1", "aa_atom": "///2/5/NE2", "dist": 3.613, "type": "po4:sidechain" }, { "index": 657, "nt_atom": "///A/2047/OP1", "aa_atom": "///E/63/N", "dist": 2.988, "type": "po4:backbone" }, { "index": 658, "nt_atom": "///A/2048/OP2", "aa_atom": "///E/62/NZ", "dist": 2.770, "type": "po4:sidechain:salt-bridge" }, { "index": 659, "nt_atom": "///A/2062/OP1", "aa_atom": "///C/243/NE", "dist": 3.164, "type": "po4:sidechain:salt-bridge" }, { "index": 660, "nt_atom": "///A/2067/OP1", "aa_atom": "///X/20/N", "dist": 3.736, "type": "po4:backbone" }, { "index": 661, "nt_atom": "///A/2068/OP1", "aa_atom": "///X/19/OG", "dist": 2.831, "type": "po4:sidechain" }, { "index": 662, "nt_atom": "///A/2067/O3'", "aa_atom": "///X/19/OG", "dist": 2.638, "type": "po4:sidechain" }, { "index": 663, "nt_atom": "///A/2079/OP2", "aa_atom": "///H/27/NH2", "dist": 2.496, "type": "po4:sidechain:salt-bridge" }, { "index": 664, "nt_atom": "///A/2079/OP2", "aa_atom": "///H/28/ND2", "dist": 3.651, "type": "po4:sidechain" }, { "index": 665, "nt_atom": "///A/2079/OP2", "aa_atom": "///X/36/NE2", "dist": 3.808, "type": "po4:sidechain:salt-bridge" }, { "index": 666, "nt_atom": "///A/2080/OP1", "aa_atom": "///H/24/N", "dist": 2.801, "type": "po4:backbone" }, { "index": 667, "nt_atom": "///A/2186/OP1", "aa_atom": "///X/37/NH1", "dist": 3.002, "type": "po4:sidechain:salt-bridge" }, { "index": 668, "nt_atom": "///A/2187/OP1", "aa_atom": "///X/37/N", "dist": 3.048, "type": "po4:backbone" }, { "index": 669, "nt_atom": "///A/2187/OP2", "aa_atom": "///X/37/NH1", "dist": 3.797, "type": "po4:sidechain:salt-bridge" }, { "index": 670, "nt_atom": "///A/2188/OP1", "aa_atom": "///X/48/NH1", "dist": 3.179, "type": "po4:sidechain:salt-bridge" }, { "index": 671, "nt_atom": "///A/2191/OP2", "aa_atom": "///C/147/NZ", "dist": 2.314, "type": "po4:sidechain:salt-bridge" }, { "index": 672, "nt_atom": "///A/2191/O5'", "aa_atom": "///C/147/NZ", "dist": 3.354, "type": "po4:sidechain" }, { "index": 673, "nt_atom": "///A/2193/OP1", "aa_atom": "///C/68/NH1", "dist": 3.105, "type": "po4:sidechain:salt-bridge" }, { "index": 674, "nt_atom": "///A/2192/O3'", "aa_atom": "///C/68/NH2", "dist": 3.480, "type": "po4:sidechain" }, { "index": 675, "nt_atom": "///A/2210/OP1", "aa_atom": "///C/171/OH", "dist": 3.083, "type": "po4:sidechain" }, { "index": 676, "nt_atom": "///A/2211/OP1", "aa_atom": "///C/266/ND2", "dist": 3.509, "type": "po4:sidechain" }, { "index": 677, "nt_atom": "///A/2215/OP2", "aa_atom": "///C/262/NZ", "dist": 3.444, "type": "po4:sidechain:salt-bridge" }, { "index": 678, "nt_atom": "///A/2218/OP1", "aa_atom": "///X/30/N", "dist": 2.685, "type": "po4:backbone" }, { "index": 679, "nt_atom": "///A/2219/OP2", "aa_atom": "///X/27/NH2", "dist": 3.028, "type": "po4:sidechain:salt-bridge" }, { "index": 680, "nt_atom": "///A/2226/OP1", "aa_atom": "///C/243/NH2", "dist": 2.907, "type": "po4:sidechain:salt-bridge" }, { "index": 681, "nt_atom": "///A/2237/OP1", "aa_atom": "///M/85/NZ", "dist": 3.678, "type": "po4:sidechain:salt-bridge" }, { "index": 682, "nt_atom": "///A/2248/OP1", "aa_atom": "///W/17/OE2", "dist": 3.299, "type": "po4:sidechain" }, { "index": 683, "nt_atom": "///A/2248/OP1", "aa_atom": "///W/19/NZ", "dist": 2.618, "type": "po4:sidechain:salt-bridge" }, { "index": 684, "nt_atom": "///A/2248/OP2", "aa_atom": "///W/17/N", "dist": 3.694, "type": "po4:backbone" }, { "index": 685, "nt_atom": "///A/2249/OP1", "aa_atom": "///W/41/NH1", "dist": 3.475, "type": "po4:sidechain:salt-bridge" }, { "index": 686, "nt_atom": "///A/2249/OP2", "aa_atom": "///W/16/OG", "dist": 2.844, "type": "po4:sidechain" }, { "index": 687, "nt_atom": "///A/2249/OP2", "aa_atom": "///W/19/NZ", "dist": 3.204, "type": "po4:sidechain:salt-bridge" }, { "index": 688, "nt_atom": "///A/2258/OP1", "aa_atom": "///W/18/OG", "dist": 2.320, "type": "po4:sidechain" }, { "index": 689, "nt_atom": "///A/2258/OP1", "aa_atom": "///W/20/N", "dist": 3.243, "type": "po4:backbone" }, { "index": 690, "nt_atom": "///A/2259/OP2", "aa_atom": "///W/18/OG", "dist": 3.297, "type": "po4:sidechain" }, { "index": 691, "nt_atom": "///A/2263/OP2", "aa_atom": "///M/86/N", "dist": 3.358, "type": "po4:backbone" }, { "index": 692, "nt_atom": "///A/2263/OP2", "aa_atom": "///M/86/O", "dist": 3.340, "type": "po4:backbone" }, { "index": 693, "nt_atom": "///A/2264/OP2", "aa_atom": "///W/12/OD1", "dist": 2.995, "type": "po4:sidechain" }, { "index": 694, "nt_atom": "///A/2265/OP2", "aa_atom": "///W/12/ND2", "dist": 3.370, "type": "po4:sidechain" }, { "index": 695, "nt_atom": "///A/2272/OP2", "aa_atom": "///3/2/NH1", "dist": 3.193, "type": "po4:sidechain:salt-bridge" }, { "index": 696, "nt_atom": "///A/2272/OP2", "aa_atom": "///3/22/ND2", "dist": 3.150, "type": "po4:sidechain" }, { "index": 697, "nt_atom": "///A/2273/OP1", "aa_atom": "///3/26/NZ", "dist": 2.378, "type": "po4:sidechain:salt-bridge" }, { "index": 698, "nt_atom": "///A/2273/OP2", "aa_atom": "///3/2/NH1", "dist": 3.144, "type": "po4:sidechain:salt-bridge" }, { "index": 699, "nt_atom": "///A/2280/OP1", "aa_atom": "///O/93/NH2", "dist": 3.777, "type": "po4:sidechain:salt-bridge" }, { "index": 700, "nt_atom": "///A/2281/OP2", "aa_atom": "///O/93/NH2", "dist": 2.461, "type": "po4:sidechain:salt-bridge" }, { "index": 701, "nt_atom": "///A/2283/OP2", "aa_atom": "///O/10/NH2", "dist": 2.662, "type": "po4:sidechain:salt-bridge" }, { "index": 702, "nt_atom": "///A/2285/OP1", "aa_atom": "///F/71/NH1", "dist": 2.983, "type": "po4:sidechain:salt-bridge" }, { "index": 703, "nt_atom": "///A/2286/OP2", "aa_atom": "///F/71/NH1", "dist": 3.395, "type": "po4:sidechain:salt-bridge" }, { "index": 704, "nt_atom": "///A/2301/OP1", "aa_atom": "///F/88/NZ", "dist": 3.441, "type": "po4:sidechain:salt-bridge" }, { "index": 705, "nt_atom": "///A/2303/O3'", "aa_atom": "///F/125/NH2", "dist": 2.982, "type": "po4:sidechain" }, { "index": 706, "nt_atom": "///A/2318/OP1", "aa_atom": "///W/44/NZ", "dist": 3.103, "type": "po4:sidechain:salt-bridge" }, { "index": 707, "nt_atom": "///A/2317/O3'", "aa_atom": "///W/44/NZ", "dist": 2.674, "type": "po4:sidechain" }, { "index": 708, "nt_atom": "///A/2319/OP1", "aa_atom": "///W/46/NE2", "dist": 3.486, "type": "po4:sidechain:salt-bridge" }, { "index": 709, "nt_atom": "///A/2320/OP1", "aa_atom": "///W/77/NH1", "dist": 3.255, "type": "po4:sidechain:salt-bridge" }, { "index": 710, "nt_atom": "///A/2321/O5'", "aa_atom": "///O/13/NE", "dist": 3.133, "type": "po4:sidechain" }, { "index": 711, "nt_atom": "///A/2335/OP1", "aa_atom": "///5/37/OG1", "dist": 3.470, "type": "po4:sidechain" }, { "index": 712, "nt_atom": "///A/2336/OP1", "aa_atom": "///5/44/NH2", "dist": 3.221, "type": "po4:sidechain:salt-bridge" }, { "index": 713, "nt_atom": "///A/2336/OP2", "aa_atom": "///5/41/NH2", "dist": 3.986, "type": "po4:sidechain:salt-bridge" }, { "index": 714, "nt_atom": "///A/2337/OP2", "aa_atom": "///5/44/NH1", "dist": 2.847, "type": "po4:sidechain:salt-bridge" }, { "index": 715, "nt_atom": "///A/2346/O3'", "aa_atom": "///5/50/ND2", "dist": 3.948, "type": "po4:sidechain" }, { "index": 716, "nt_atom": "///A/2348/OP1", "aa_atom": "///5/26/N", "dist": 3.243, "type": "po4:backbone" }, { "index": 717, "nt_atom": "///A/2348/OP2", "aa_atom": "///5/25/ND1", "dist": 3.667, "type": "po4:sidechain:salt-bridge" }, { "index": 718, "nt_atom": "///A/2349/OP1", "aa_atom": "///5/39/NE", "dist": 2.429, "type": "po4:sidechain:salt-bridge" }, { "index": 719, "nt_atom": "///A/2349/OP1", "aa_atom": "///5/39/NH1", "dist": 3.227, "type": "po4:sidechain:salt-bridge" }, { "index": 720, "nt_atom": "///A/2348/O3'", "aa_atom": "///5/39/NH1", "dist": 3.532, "type": "po4:sidechain" }, { "index": 721, "nt_atom": "///A/2352/OP1", "aa_atom": "///W/55/N", "dist": 3.102, "type": "po4:backbone" }, { "index": 722, "nt_atom": "///A/2352/OP2", "aa_atom": "///5/38/NZ", "dist": 3.445, "type": "po4:sidechain:salt-bridge" }, { "index": 723, "nt_atom": "///A/2351/O3'", "aa_atom": "///W/55/N", "dist": 3.520, "type": "po4:backbone" }, { "index": 724, "nt_atom": "///A/2367/OP1", "aa_atom": "///O/18/NZ", "dist": 3.400, "type": "po4:sidechain:salt-bridge" }, { "index": 725, "nt_atom": "///A/2370/OP1", "aa_atom": "///W/55/NZ", "dist": 3.389, "type": "po4:sidechain:salt-bridge" }, { "index": 726, "nt_atom": "///A/2377/OP2", "aa_atom": "///5/34/NZ", "dist": 2.915, "type": "po4:sidechain:salt-bridge" }, { "index": 727, "nt_atom": "///A/2377/O5'", "aa_atom": "///5/34/NZ", "dist": 3.377, "type": "po4:sidechain" }, { "index": 728, "nt_atom": "///A/2379/OP2", "aa_atom": "///5/30/NE2", "dist": 2.664, "type": "po4:sidechain:salt-bridge" }, { "index": 729, "nt_atom": "///A/2379/O3'", "aa_atom": "///5/27/N", "dist": 3.708, "type": "po4:backbone" }, { "index": 730, "nt_atom": "///A/2381/OP1", "aa_atom": "///L/63/N", "dist": 3.227, "type": "po4:backbone" }, { "index": 731, "nt_atom": "///A/2382/OP1", "aa_atom": "///L/63/NZ", "dist": 2.547, "type": "po4:sidechain:salt-bridge" }, { "index": 732, "nt_atom": "///A/2392/OP1", "aa_atom": "///L/70/NZ", "dist": 3.251, "type": "po4:sidechain:salt-bridge" }, { "index": 733, "nt_atom": "///A/2392/OP2", "aa_atom": "///L/70/NZ", "dist": 3.216, "type": "po4:sidechain:salt-bridge" }, { "index": 734, "nt_atom": "///A/2405/OP1", "aa_atom": "///5/28/NZ", "dist": 2.751, "type": "po4:sidechain:salt-bridge" }, { "index": 735, "nt_atom": "///A/2405/OP1", "aa_atom": "///5/44/NE", "dist": 2.997, "type": "po4:sidechain:salt-bridge" }, { "index": 736, "nt_atom": "///A/2405/OP2", "aa_atom": "///5/28/NZ", "dist": 3.205, "type": "po4:sidechain:salt-bridge" }, { "index": 737, "nt_atom": "///A/2406/OP1", "aa_atom": "///5/40/NZ", "dist": 2.795, "type": "po4:sidechain:salt-bridge" }, { "index": 738, "nt_atom": "///A/2407/OP1", "aa_atom": "///5/33/N", "dist": 3.002, "type": "po4:backbone" }, { "index": 739, "nt_atom": "///A/2418/OP1", "aa_atom": "///L/59/NH2", "dist": 3.885, "type": "po4:sidechain:salt-bridge" }, { "index": 740, "nt_atom": "///A/2431/OP2", "aa_atom": "///E/62/NZ", "dist": 3.237, "type": "po4:sidechain:salt-bridge" }, { "index": 741, "nt_atom": "///A/2432/OP1", "aa_atom": "///E/68/NH1", "dist": 2.879, "type": "po4:sidechain:salt-bridge" }, { "index": 742, "nt_atom": "///A/2453/OP1", "aa_atom": "///6/4/NE", "dist": 2.980, "type": "po4:sidechain:salt-bridge" }, { "index": 743, "nt_atom": "///A/2453/OP1", "aa_atom": "///6/5/N", "dist": 3.292, "type": "po4:backbone" }, { "index": 744, "nt_atom": "///A/2454/OP1", "aa_atom": "///6/6/OG", "dist": 2.807, "type": "po4:sidechain" }, { "index": 745, "nt_atom": "///A/2465/OP1", "aa_atom": "///6/32/NE", "dist": 3.121, "type": "po4:sidechain:salt-bridge" }, { "index": 746, "nt_atom": "///A/2465/OP1", "aa_atom": "///6/32/NH2", "dist": 2.536, "type": "po4:sidechain:salt-bridge" }, { "index": 747, "nt_atom": "///A/2465/OP2", "aa_atom": "///6/2/NZ", "dist": 2.914, "type": "po4:sidechain:salt-bridge" }, { "index": 748, "nt_atom": "///A/2465/O5'", "aa_atom": "///6/32/NH2", "dist": 3.139, "type": "po4:sidechain" }, { "index": 749, "nt_atom": "///A/2472/OP1", "aa_atom": "///M/46/NE2", "dist": 3.090, "type": "po4:sidechain" }, { "index": 750, "nt_atom": "///A/2483/OP1", "aa_atom": "///M/83/N", "dist": 3.461, "type": "po4:backbone" }, { "index": 751, "nt_atom": "///A/2483/OP2", "aa_atom": "///M/82/NH1", "dist": 3.192, "type": "po4:sidechain:salt-bridge" }, { "index": 752, "nt_atom": "///A/2498/OP1", "aa_atom": "///D/128/NE", "dist": 3.202, "type": "po4:sidechain:salt-bridge" }, { "index": 753, "nt_atom": "///A/2499/OP1", "aa_atom": "///D/128/N", "dist": 3.354, "type": "po4:backbone" }, { "index": 754, "nt_atom": "///A/2516/OP2", "aa_atom": "///G/172/NZ", "dist": 2.416, "type": "po4:sidechain:salt-bridge" }, { "index": 755, "nt_atom": "///A/2559/OP1", "aa_atom": "///D/151/N", "dist": 3.420, "type": "po4:backbone" }, { "index": 756, "nt_atom": "///A/2566/O3'", "aa_atom": "///D/137/N", "dist": 3.994, "type": "po4:backbone" }, { "index": 757, "nt_atom": "///A/2578/OP2", "aa_atom": "///C/238/N", "dist": 3.185, "type": "po4:backbone" }, { "index": 758, "nt_atom": "///A/2585/OP1", "aa_atom": "///C/234/O", "dist": 3.063, "type": "po4:backbone" }, { "index": 759, "nt_atom": "///A/2602/O3'", "aa_atom": "///2/8/NZ", "dist": 3.642, "type": "po4:sidechain" }, { "index": 760, "nt_atom": "///A/2606/OP1", "aa_atom": "///D/157/NZ", "dist": 2.791, "type": "po4:sidechain:salt-bridge" }, { "index": 761, "nt_atom": "///A/2607/OP1", "aa_atom": "///D/158/N", "dist": 3.142, "type": "po4:backbone" }, { "index": 762, "nt_atom": "///A/2608/OP1", "aa_atom": "///D/124/NH1", "dist": 3.267, "type": "po4:sidechain:salt-bridge" }, { "index": 763, "nt_atom": "///A/2625/OP2", "aa_atom": "///D/84/NH2", "dist": 3.103, "type": "po4:sidechain:salt-bridge" }, { "index": 764, "nt_atom": "///A/2627/OP1", "aa_atom": "///J/95/NZ", "dist": 2.690, "type": "po4:sidechain:salt-bridge" }, { "index": 765, "nt_atom": "///A/2629/OP1", "aa_atom": "///J/78/OG", "dist": 3.019, "type": "po4:sidechain" }, { "index": 766, "nt_atom": "///A/2644/O3'", "aa_atom": "///G/160/NZ", "dist": 2.846, "type": "po4:sidechain" }, { "index": 767, "nt_atom": "///A/2646/OP1", "aa_atom": "///G/158/NZ", "dist": 3.561, "type": "po4:sidechain:salt-bridge" }, { "index": 768, "nt_atom": "///A/2662/OP1", "aa_atom": "///K/31/N", "dist": 3.772, "type": "po4:backbone" }, { "index": 769, "nt_atom": "///A/2663/OP2", "aa_atom": "///K/31/NH2", "dist": 3.635, "type": "po4:sidechain:salt-bridge" }, { "index": 770, "nt_atom": "///A/2665/OP2", "aa_atom": "///D/126/ND2", "dist": 3.523, "type": "po4:sidechain" }, { "index": 771, "nt_atom": "///A/2667/OP1", "aa_atom": "///D/114/N", "dist": 3.158, "type": "po4:backbone" }, { "index": 772, "nt_atom": "///A/2667/OP1", "aa_atom": "///D/195/N", "dist": 3.073, "type": "po4:backbone" }, { "index": 773, "nt_atom": "///A/2668/OP1", "aa_atom": "///D/9/NZ", "dist": 3.055, "type": "po4:sidechain:salt-bridge" }, { "index": 774, "nt_atom": "///A/2668/OP2", "aa_atom": "///D/114/NZ", "dist": 2.980, "type": "po4:sidechain:salt-bridge" }, { "index": 775, "nt_atom": "///A/2670/OP1", "aa_atom": "///P/52/NH2", "dist": 2.696, "type": "po4:sidechain:salt-bridge" }, { "index": 776, "nt_atom": "///A/2671/OP1", "aa_atom": "///P/76/NE2", "dist": 3.503, "type": "po4:sidechain" }, { "index": 777, "nt_atom": "///A/2671/OP2", "aa_atom": "///P/52/NH1", "dist": 2.345, "type": "po4:sidechain:salt-bridge" }, { "index": 778, "nt_atom": "///A/2670/O3'", "aa_atom": "///P/76/NE2", "dist": 3.541, "type": "po4:sidechain" }, { "index": 779, "nt_atom": "///A/2672/OP1", "aa_atom": "///K/78/NH1", "dist": 3.358, "type": "po4:sidechain:salt-bridge" }, { "index": 780, "nt_atom": "///A/2677/OP1", "aa_atom": "///N/14/OG", "dist": 2.983, "type": "po4:sidechain" }, { "index": 781, "nt_atom": "///A/2677/OP2", "aa_atom": "///N/14/OG", "dist": 2.890, "type": "po4:sidechain" }, { "index": 782, "nt_atom": "///A/2696/OP1", "aa_atom": "///N/18/NZ", "dist": 3.027, "type": "po4:sidechain:salt-bridge" }, { "index": 783, "nt_atom": "///A/2706/OP1", "aa_atom": "///P/97/NZ", "dist": 3.390, "type": "po4:sidechain:salt-bridge" }, { "index": 784, "nt_atom": "///A/2707/OP1", "aa_atom": "///P/54/NH1", "dist": 2.547, "type": "po4:sidechain:salt-bridge" }, { "index": 785, "nt_atom": "///A/2710/OP1", "aa_atom": "///N/3/ND1", "dist": 3.003, "type": "po4:sidechain:salt-bridge" }, { "index": 786, "nt_atom": "///A/2710/OP2", "aa_atom": "///D/114/NZ", "dist": 3.455, "type": "po4:sidechain:salt-bridge" }, { "index": 787, "nt_atom": "///A/2715/OP1", "aa_atom": "///K/70/NE", "dist": 3.386, "type": "po4:sidechain:salt-bridge" }, { "index": 788, "nt_atom": "///A/2718/OP1", "aa_atom": "///D/174/OG", "dist": 2.818, "type": "po4:sidechain" }, { "index": 789, "nt_atom": "///A/2717/O3'", "aa_atom": "///D/174/OG", "dist": 2.999, "type": "po4:sidechain" }, { "index": 790, "nt_atom": "///A/2729/OP1", "aa_atom": "///6/36/NE", "dist": 2.998, "type": "po4:sidechain:salt-bridge" }, { "index": 791, "nt_atom": "///A/2729/OP2", "aa_atom": "///6/24/NH2", "dist": 3.281, "type": "po4:sidechain:salt-bridge" }, { "index": 792, "nt_atom": "///A/2730/OP1", "aa_atom": "///6/34/NZ", "dist": 3.566, "type": "po4:sidechain:salt-bridge" }, { "index": 793, "nt_atom": "///A/2734/OP1", "aa_atom": "///G/74/ND2", "dist": 3.238, "type": "po4:sidechain" }, { "index": 794, "nt_atom": "///A/2736/OP1", "aa_atom": "///G/4/N", "dist": 3.781, "type": "po4:backbone" }, { "index": 795, "nt_atom": "///A/2737/OP2", "aa_atom": "///G/3/NH1", "dist": 2.664, "type": "po4:sidechain:salt-bridge" }, { "index": 796, "nt_atom": "///A/2736/O3'", "aa_atom": "///G/62/NE", "dist": 3.309, "type": "po4:sidechain" }, { "index": 797, "nt_atom": "///A/2743/OP2", "aa_atom": "///6/19/NE", "dist": 2.497, "type": "po4:sidechain:salt-bridge" }, { "index": 798, "nt_atom": "///A/2743/OP2", "aa_atom": "///6/19/NH1", "dist": 3.131, "type": "po4:sidechain:salt-bridge" }, { "index": 799, "nt_atom": "///A/2744/OP1", "aa_atom": "///6/20/OD1", "dist": 2.928, "type": "po4:sidechain" }, { "index": 800, "nt_atom": "///A/2760/OP1", "aa_atom": "///D/169/NH1", "dist": 2.876, "type": "po4:sidechain:salt-bridge" }, { "index": 801, "nt_atom": "///A/2760/OP1", "aa_atom": "///D/169/NH2", "dist": 2.944, "type": "po4:sidechain:salt-bridge" }, { "index": 802, "nt_atom": "///A/2759/O3'", "aa_atom": "///D/171/OG1", "dist": 3.484, "type": "po4:sidechain" }, { "index": 803, "nt_atom": "///A/2761/OP2", "aa_atom": "///D/169/NH1", "dist": 3.370, "type": "po4:sidechain:salt-bridge" }, { "index": 804, "nt_atom": "///A/2798/OP1", "aa_atom": "///D/63/N", "dist": 3.099, "type": "po4:backbone" }, { "index": 805, "nt_atom": "///A/2803/OP1", "aa_atom": "///N/99/NZ", "dist": 3.118, "type": "po4:sidechain:salt-bridge" }, { "index": 806, "nt_atom": "///A/2805/OP2", "aa_atom": "///N/42/NZ", "dist": 3.466, "type": "po4:sidechain:salt-bridge" }, { "index": 807, "nt_atom": "///A/2807/OP1", "aa_atom": "///N/2/NH1", "dist": 3.210, "type": "po4:sidechain:salt-bridge" }, { "index": 808, "nt_atom": "///A/2807/OP1", "aa_atom": "///N/4/N", "dist": 3.568, "type": "po4:backbone" }, { "index": 809, "nt_atom": "///A/2807/OP2", "aa_atom": "///N/2/NH1", "dist": 3.256, "type": "po4:sidechain:salt-bridge" }, { "index": 810, "nt_atom": "///A/2808/OP2", "aa_atom": "///D/115/N", "dist": 2.866, "type": "po4:backbone" }, { "index": 811, "nt_atom": "///A/2818/OP2", "aa_atom": "///D/60/NE", "dist": 3.323, "type": "po4:sidechain:salt-bridge" }, { "index": 812, "nt_atom": "///A/2818/OP2", "aa_atom": "///D/60/NH1", "dist": 2.397, "type": "po4:sidechain:salt-bridge" }, { "index": 813, "nt_atom": "///A/2817/O3'", "aa_atom": "///D/57/NH1", "dist": 2.824, "type": "po4:sidechain" }, { "index": 814, "nt_atom": "///A/2822/OP1", "aa_atom": "///D/57/NH2", "dist": 2.981, "type": "po4:sidechain:salt-bridge" }, { "index": 815, "nt_atom": "///A/2826/OP1", "aa_atom": "///N/46/NE", "dist": 3.486, "type": "po4:sidechain:salt-bridge" }, { "index": 816, "nt_atom": "///A/2827/OP1", "aa_atom": "///N/53/OG1", "dist": 3.319, "type": "po4:sidechain" }, { "index": 817, "nt_atom": "///A/2832/OP1", "aa_atom": "///P/53/O", "dist": 2.903, "type": "po4:backbone" }, { "index": 818, "nt_atom": "///A/2833/OP1", "aa_atom": "///P/54/NH2", "dist": 3.161, "type": "po4:sidechain:salt-bridge" }, { "index": 819, "nt_atom": "///A/2834/OP1", "aa_atom": "///P/97/NZ", "dist": 3.649, "type": "po4:sidechain:salt-bridge" }, { "index": 820, "nt_atom": "///A/2835/OP2", "aa_atom": "///P/96/N", "dist": 3.172, "type": "po4:backbone" }, { "index": 821, "nt_atom": "///A/2836/OP2", "aa_atom": "///P/94/NE", "dist": 3.172, "type": "po4:sidechain:salt-bridge" }, { "index": 822, "nt_atom": "///A/2838/O3'", "aa_atom": "///N/64/NH1", "dist": 3.344, "type": "po4:sidechain" }, { "index": 823, "nt_atom": "///A/2850/OP1", "aa_atom": "///P/114/NZ", "dist": 2.901, "type": "po4:sidechain:salt-bridge" }, { "index": 824, "nt_atom": "///A/2860/OP1", "aa_atom": "///N/46/NH2", "dist": 3.607, "type": "po4:sidechain:salt-bridge" }, { "index": 825, "nt_atom": "///A/2861/OP1", "aa_atom": "///N/4/NH2", "dist": 2.758, "type": "po4:sidechain:salt-bridge" }, { "index": 826, "nt_atom": "///A/2862/OP1", "aa_atom": "///N/4/NH2", "dist": 3.903, "type": "po4:sidechain:salt-bridge" }, { "index": 827, "nt_atom": "///A/2863/O3'", "aa_atom": "///P/4/NZ", "dist": 3.656, "type": "po4:sidechain" }, { "index": 828, "nt_atom": "///A/2867/O3'", "aa_atom": "///N/90/NH2", "dist": 3.007, "type": "po4:sidechain" }, { "index": 829, "nt_atom": "///A/2870/OP1", "aa_atom": "///2/48/OH", "dist": 2.882, "type": "po4:sidechain" }, { "index": 830, "nt_atom": "///A/2870/O3'", "aa_atom": "///2/40/NE2", "dist": 3.215, "type": "po4:sidechain" }, { "index": 831, "nt_atom": "///B/7/OP1", "aa_atom": "///O/5/NZ", "dist": 3.677, "type": "po4:sidechain:salt-bridge" }, { "index": 832, "nt_atom": "///B/9/OP1", "aa_atom": "///O/20/NH2", "dist": 2.891, "type": "po4:sidechain:salt-bridge" }, { "index": 833, "nt_atom": "///B/11/OP1", "aa_atom": "///W/72/NZ", "dist": 3.611, "type": "po4:sidechain:salt-bridge" }, { "index": 834, "nt_atom": "///B/27/OP1", "aa_atom": "///O/35/NE2", "dist": 3.815, "type": "po4:sidechain:salt-bridge" }, { "index": 835, "nt_atom": "///B/28/OP1", "aa_atom": "///O/32/OG", "dist": 3.525, "type": "po4:sidechain" }, { "index": 836, "nt_atom": "///B/27/O3'", "aa_atom": "///O/37/OH", "dist": 3.818, "type": "po4:sidechain" }, { "index": 837, "nt_atom": "///B/29/OP2", "aa_atom": "///O/33/OG", "dist": 3.314, "type": "po4:sidechain" }, { "index": 838, "nt_atom": "///B/31/OP1", "aa_atom": "///F/30/NH2", "dist": 3.774, "type": "po4:sidechain:salt-bridge" }, { "index": 839, "nt_atom": "///B/32/OP1", "aa_atom": "///F/30/NH1", "dist": 3.770, "type": "po4:sidechain:salt-bridge" }, { "index": 840, "nt_atom": "///B/42/OP2", "aa_atom": "///1/2/NZ", "dist": 2.903, "type": "po4:sidechain:salt-bridge" }, { "index": 841, "nt_atom": "///B/42/O5'", "aa_atom": "///F/64/NZ", "dist": 2.954, "type": "po4:sidechain" }, { "index": 842, "nt_atom": "///B/43/OP1", "aa_atom": "///1/2/N", "dist": 3.214, "type": "po4:backbone" }, { "index": 843, "nt_atom": "///B/47/OP2", "aa_atom": "///O/4/NZ", "dist": 3.515, "type": "po4:sidechain:salt-bridge" }, { "index": 844, "nt_atom": "///B/48/OP1", "aa_atom": "///O/31/NH2", "dist": 3.200, "type": "po4:sidechain:salt-bridge" }, { "index": 845, "nt_atom": "///B/48/OP1", "aa_atom": "///O/97/N", "dist": 3.816, "type": "po4:backbone" }, { "index": 846, "nt_atom": "///B/48/OP2", "aa_atom": "///O/31/NH2", "dist": 3.192, "type": "po4:sidechain:salt-bridge" }, { "index": 847, "nt_atom": "///B/49/OP1", "aa_atom": "///O/101/N", "dist": 2.744, "type": "po4:backbone" }, { "index": 848, "nt_atom": "///B/50/OP1", "aa_atom": "///O/67/N", "dist": 2.619, "type": "po4:backbone" }, { "index": 849, "nt_atom": "///B/50/OP2", "aa_atom": "///O/65/O", "dist": 3.292, "type": "po4:backbone" }, { "index": 850, "nt_atom": "///B/51/OP2", "aa_atom": "///O/66/ND2", "dist": 2.896, "type": "po4:sidechain" }, { "index": 851, "nt_atom": "///B/56/OP1", "aa_atom": "///F/24/ND2", "dist": 2.712, "type": "po4:sidechain" }, { "index": 852, "nt_atom": "///B/60/OP1", "aa_atom": "///O/2/N", "dist": 3.262, "type": "po4:backbone" }, { "index": 853, "nt_atom": "///B/77/OP1", "aa_atom": "///V/23/NH1", "dist": 3.320, "type": "po4:sidechain:salt-bridge" }, { "index": 854, "nt_atom": "///B/77/OP1", "aa_atom": "///V/23/NH2", "dist": 2.851, "type": "po4:sidechain:salt-bridge" }, { "index": 855, "nt_atom": "///B/76/O3'", "aa_atom": "///V/23/NH1", "dist": 3.400, "type": "po4:sidechain" }, { "index": 856, "nt_atom": "///B/78/OP1", "aa_atom": "///V/20/NH2", "dist": 3.403, "type": "po4:sidechain:salt-bridge" }, { "index": 857, "nt_atom": "///B/90/OP1", "aa_atom": "///M/16/ND1", "dist": 3.215, "type": "po4:sidechain:salt-bridge" }, { "index": 858, "nt_atom": "///B/91/OP1", "aa_atom": "///M/19/N", "dist": 3.417, "type": "po4:backbone" }, { "index": 859, "nt_atom": "///B/93/OP1", "aa_atom": "///V/24/NH1", "dist": 2.716, "type": "po4:sidechain:salt-bridge" }, { "index": 860, "nt_atom": "///B/93/OP2", "aa_atom": "///V/20/NH1", "dist": 3.103, "type": "po4:sidechain:salt-bridge" }, { "index": 861, "nt_atom": "///B/94/OP1", "aa_atom": "///V/21/NH2", "dist": 3.362, "type": "po4:sidechain:salt-bridge" }, { "index": 862, "nt_atom": "///B/94/OP1", "aa_atom": "///V/24/NH2", "dist": 3.352, "type": "po4:sidechain:salt-bridge" }, { "index": 863, "nt_atom": "///B/93/O3'", "aa_atom": "///V/24/NH2", "dist": 3.269, "type": "po4:sidechain" }, { "index": 864, "nt_atom": "///B/95/OP2", "aa_atom": "///V/21/NH2", "dist": 3.284, "type": "po4:sidechain:salt-bridge" }, { "index": 865, "nt_atom": "///B/104/OP1", "aa_atom": "///V/78/NZ", "dist": 2.761, "type": "po4:sidechain:salt-bridge" }, { "index": 866, "nt_atom": "///B/103/O3'", "aa_atom": "///V/78/NZ", "dist": 3.220, "type": "po4:sidechain" }, { "index": 867, "nt_atom": "///B/116/O3'", "aa_atom": "///O/57/NZ", "dist": 2.564, "type": "po4:sidechain" } ], "num_sugarAA_hbonds": 341, "sugarAA_hbonds": [ { "index": 1, "nt_atom": "///a/16/O2'", "aa_atom": "///e/23/N", "dist": 3.562, "type": "sugar:backbone" }, { "index": 2, "nt_atom": "///a/33/O2'", "aa_atom": "///l/29/NE2", "dist": 3.169, "type": "sugar:sidechain" }, { "index": 3, "nt_atom": "///a/35/O2'", "aa_atom": "///l/115/O", "dist": 2.646, "type": "sugar:backbone" }, { "index": 4, "nt_atom": "///a/36/O2'", "aa_atom": "///l/114/NH2", "dist": 3.286, "type": "sugar:sidechain" }, { "index": 5, "nt_atom": "///a/121/O2'", "aa_atom": "///q/9/NH1", "dist": 2.629, "type": "sugar:sidechain" }, { "index": 6, "nt_atom": "///a/130/O2'", "aa_atom": "///p/64/O", "dist": 2.629, "type": "sugar:backbone" }, { "index": 7, "nt_atom": "///a/130/O2'", "aa_atom": "///p/66/NE2", "dist": 3.780, "type": "sugar:sidechain" }, { "index": 8, "nt_atom": "///a/187/O2'", "aa_atom": "///t/59/OD2", "dist": 3.478, "type": "sugar:sidechain" }, { "index": 9, "nt_atom": "///a/248/O2'", "aa_atom": "///q/21/O", "dist": 2.947, "type": "sugar:backbone" }, { "index": 10, "nt_atom": "///a/248/O2'", "aa_atom": "///q/23/OG1", "dist": 3.625, "type": "sugar:sidechain" }, { "index": 11, "nt_atom": "///a/256/O2'", "aa_atom": "///t/70/ND2", "dist": 3.122, "type": "sugar:sidechain" }, { "index": 12, "nt_atom": "///a/258/O2'", "aa_atom": "///q/69/O", "dist": 2.490, "type": "sugar:backbone" }, { "index": 13, "nt_atom": "///a/317/O2'", "aa_atom": "///t/17/NH1", "dist": 3.839, "type": "sugar:sidechain" }, { "index": 14, "nt_atom": "///a/368/O2'", "aa_atom": "///p/17/OH", "dist": 3.712, "type": "sugar:sidechain" }, { "index": 15, "nt_atom": "///a/369/O2'", "aa_atom": "///p/6/O", "dist": 2.895, "type": "sugar:backbone" }, { "index": 16, "nt_atom": "///a/384/O2'", "aa_atom": "///p/28/NH2", "dist": 3.061, "type": "sugar:sidechain" }, { "index": 17, "nt_atom": "///a/401/O4'", "aa_atom": "///d/116/OE1", "dist": 2.850, "type": "sugar:sidechain" }, { "index": 18, "nt_atom": "///a/423/O2'", "aa_atom": "///d/31/NZ", "dist": 2.577, "type": "sugar:sidechain" }, { "index": 19, "nt_atom": "///a/431/O4'", "aa_atom": "///d/154/NH1", "dist": 3.665, "type": "sugar:sidechain" }, { "index": 20, "nt_atom": "///a/433/O4'", "aa_atom": "///d/120/ND1", "dist": 3.593, "type": "sugar:sidechain" }, { "index": 21, "nt_atom": "///a/477/O2'", "aa_atom": "///p/13/NZ", "dist": 2.699, "type": "sugar:sidechain" }, { "index": 22, "nt_atom": "///a/506/O4'", "aa_atom": "///d/41/NE2", "dist": 3.359, "type": "sugar:sidechain" }, { "index": 23, "nt_atom": "///a/535/O2'", "aa_atom": "///d/40/N", "dist": 3.127, "type": "sugar:backbone" }, { "index": 24, "nt_atom": "///a/546/O2'", "aa_atom": "///l/28/O", "dist": 3.178, "type": "sugar:backbone" }, { "index": 25, "nt_atom": "///a/546/O2'", "aa_atom": "///l/84/N", "dist": 3.769, "type": "sugar:backbone" }, { "index": 26, "nt_atom": "///a/547/O2'", "aa_atom": "///l/26/OD1", "dist": 3.807, "type": "sugar:sidechain" }, { "index": 27, "nt_atom": "///a/574/O2'", "aa_atom": "///o/61/ND2", "dist": 3.265, "type": "sugar:sidechain" }, { "index": 28, "nt_atom": "///a/579/O2'", "aa_atom": "///l/5/ND2", "dist": 3.191, "type": "sugar:sidechain" }, { "index": 29, "nt_atom": "///a/580/O2'", "aa_atom": "///h/4/NE2", "dist": 3.094, "type": "sugar:sidechain" }, { "index": 30, "nt_atom": "///a/591/O4'", "aa_atom": "///q/31/NH2", "dist": 3.348, "type": "sugar:sidechain" }, { "index": 31, "nt_atom": "///a/591/O2'", "aa_atom": "///q/31/NH2", "dist": 2.656, "type": "sugar:sidechain" }, { "index": 32, "nt_atom": "///a/593/O2'", "aa_atom": "///h/122/N", "dist": 2.955, "type": "sugar:backbone" }, { "index": 33, "nt_atom": "///a/602/O2'", "aa_atom": "///p/35/NH1", "dist": 2.645, "type": "sugar:sidechain" }, { "index": 34, "nt_atom": "///a/617/O2'", "aa_atom": "///p/11/OG", "dist": 3.051, "type": "sugar:sidechain" }, { "index": 35, "nt_atom": "///a/651/O2'", "aa_atom": "///o/22/O", "dist": 3.270, "type": "sugar:backbone" }, { "index": 36, "nt_atom": "///a/661/O2'", "aa_atom": "///o/49/OD1", "dist": 2.801, "type": "sugar:sidechain" }, { "index": 37, "nt_atom": "///a/661/O2'", "aa_atom": "///o/51/ND1", "dist": 3.601, "type": "sugar:sidechain" }, { "index": 38, "nt_atom": "///a/662/O2'", "aa_atom": "///o/46/OD1", "dist": 2.326, "type": "sugar:sidechain" }, { "index": 39, "nt_atom": "///a/665/O2'", "aa_atom": "///f/79/NH1", "dist": 3.192, "type": "sugar:sidechain" }, { "index": 40, "nt_atom": "///a/666/O2'", "aa_atom": "///r/64/OH", "dist": 3.608, "type": "sugar:sidechain" }, { "index": 41, "nt_atom": "///a/669/O2'", "aa_atom": "///k/116/O", "dist": 2.975, "type": "sugar:backbone" }, { "index": 42, "nt_atom": "///a/678/O2'", "aa_atom": "///k/41/O", "dist": 3.341, "type": "sugar:backbone" }, { "index": 43, "nt_atom": "///a/679/O2'", "aa_atom": "///k/44/NE1", "dist": 3.920, "type": "sugar:sidechain" }, { "index": 44, "nt_atom": "///a/680/O4'", "aa_atom": "///k/44/NE1", "dist": 3.181, "type": "sugar:sidechain" }, { "index": 45, "nt_atom": "///a/687/O2'", "aa_atom": "///g/82/O", "dist": 3.824, "type": "sugar:backbone" }, { "index": 46, "nt_atom": "///a/700/O2'", "aa_atom": "///k/33/OG1", "dist": 3.089, "type": "sugar:sidechain" }, { "index": 47, "nt_atom": "///a/712/O4'", "aa_atom": "///k/118/O", "dist": 2.854, "type": "sugar:backbone" }, { "index": 48, "nt_atom": "///a/712/O2'", "aa_atom": "///u/31/OE2", "dist": 2.503, "type": "sugar:sidechain" }, { "index": 49, "nt_atom": "///a/713/O2'", "aa_atom": "///r/39/O", "dist": 2.724, "type": "sugar:backbone" }, { "index": 50, "nt_atom": "///a/714/O2'", "aa_atom": "///r/52/NE2", "dist": 2.997, "type": "sugar:sidechain" }, { "index": 51, "nt_atom": "///a/730/O2'", "aa_atom": "///f/89/O", "dist": 2.855, "type": "sugar:backbone" }, { "index": 52, "nt_atom": "///a/734/O2'", "aa_atom": "///o/52/OG", "dist": 3.579, "type": "sugar:sidechain" }, { "index": 53, "nt_atom": "///a/744/O2'", "aa_atom": "///o/23/N", "dist": 3.208, "type": "sugar:backbone" }, { "index": 54, "nt_atom": "///a/757/O2'", "aa_atom": "///o/54/NH2", "dist": 3.651, "type": "sugar:sidechain" }, { "index": 55, "nt_atom": "///a/758/O4'", "aa_atom": "///o/54/NH2", "dist": 3.804, "type": "sugar:sidechain" }, { "index": 56, "nt_atom": "///a/772/O2'", "aa_atom": "///k/122/O", "dist": 3.230, "type": "sugar:backbone" }, { "index": 57, "nt_atom": "///a/819/O2'", "aa_atom": "///h/9/OD1", "dist": 2.757, "type": "sugar:sidechain" }, { "index": 58, "nt_atom": "///a/819/O2'", "aa_atom": "///h/13/NH2", "dist": 3.073, "type": "sugar:sidechain" }, { "index": 59, "nt_atom": "///a/869/O2'", "aa_atom": "///h/15/NH1", "dist": 2.600, "type": "sugar:sidechain" }, { "index": 60, "nt_atom": "///a/870/O2'", "aa_atom": "///h/12/OG1", "dist": 3.447, "type": "sugar:sidechain" }, { "index": 61, "nt_atom": "///a/915/O2'", "aa_atom": "///e/25/O", "dist": 2.869, "type": "sugar:backbone" }, { "index": 62, "nt_atom": "///a/916/O2'", "aa_atom": "///e/26/O", "dist": 2.565, "type": "sugar:backbone" }, { "index": 63, "nt_atom": "///a/958/O4'", "aa_atom": "///j/56/NE2", "dist": 3.859, "type": "sugar:sidechain" }, { "index": 64, "nt_atom": "///a/967/O2'", "aa_atom": "///j/55/O", "dist": 3.957, "type": "sugar:backbone" }, { "index": 65, "nt_atom": "///a/974/O2'", "aa_atom": "///n/59/O", "dist": 3.064, "type": "sugar:backbone" }, { "index": 66, "nt_atom": "///a/980/O2'", "aa_atom": "///s/55/O", "dist": 3.253, "type": "sugar:backbone" }, { "index": 67, "nt_atom": "///a/989/O4'", "aa_atom": "///n/8/ND2", "dist": 2.806, "type": "sugar:sidechain" }, { "index": 68, "nt_atom": "///a/1049/O2'", "aa_atom": "///c/160/O", "dist": 3.316, "type": "sugar:backbone" }, { "index": 69, "nt_atom": "///a/1050/O2'", "aa_atom": "///c/195/O", "dist": 3.430, "type": "sugar:backbone" }, { "index": 70, "nt_atom": "///a/1053/O2'", "aa_atom": "///j/53/O", "dist": 3.422, "type": "sugar:backbone" }, { "index": 71, "nt_atom": "///a/1055/O4'", "aa_atom": "///j/58/ND2", "dist": 3.192, "type": "sugar:sidechain" }, { "index": 72, "nt_atom": "///a/1055/O2'", "aa_atom": "///j/58/ND2", "dist": 3.039, "type": "sugar:sidechain" }, { "index": 73, "nt_atom": "///a/1067/O2'", "aa_atom": "///b/103/OD1", "dist": 2.565, "type": "sugar:sidechain" }, { "index": 74, "nt_atom": "///a/1068/O2'", "aa_atom": "///b/102/OG1", "dist": 3.314, "type": "sugar:sidechain" }, { "index": 75, "nt_atom": "///a/1096/O2'", "aa_atom": "///b/98/O", "dist": 2.503, "type": "sugar:backbone" }, { "index": 76, "nt_atom": "///a/1100/O2'", "aa_atom": "///c/169/NH2", "dist": 3.447, "type": "sugar:sidechain" }, { "index": 77, "nt_atom": "///a/1117/O2'", "aa_atom": "///j/39/O", "dist": 2.526, "type": "sugar:backbone" }, { "index": 78, "nt_atom": "///a/1122/O2'", "aa_atom": "///i/18/NH2", "dist": 2.901, "type": "sugar:sidechain" }, { "index": 79, "nt_atom": "///a/1124/O2'", "aa_atom": "///i/5/OE1", "dist": 3.036, "type": "sugar:sidechain" }, { "index": 80, "nt_atom": "///a/1124/O2'", "aa_atom": "///i/5/NE2", "dist": 2.816, "type": "sugar:sidechain" }, { "index": 81, "nt_atom": "///a/1141/O2'", "aa_atom": "///i/7/OH", "dist": 2.572, "type": "sugar:sidechain" }, { "index": 82, "nt_atom": "///a/1142/O4'", "aa_atom": "///i/18/NE", "dist": 3.775, "type": "sugar:sidechain" }, { "index": 83, "nt_atom": "///a/1173/O2'", "aa_atom": "///i/106/N", "dist": 3.938, "type": "sugar:backbone" }, { "index": 84, "nt_atom": "///a/1180/O2'", "aa_atom": "///i/112/OE1", "dist": 3.457, "type": "sugar:sidechain" }, { "index": 85, "nt_atom": "///a/1181/O2'", "aa_atom": "///n/100/OG", "dist": 2.885, "type": "sugar:sidechain" }, { "index": 86, "nt_atom": "///a/1183/O2'", "aa_atom": "///c/176/ND1", "dist": 2.701, "type": "sugar:sidechain" }, { "index": 87, "nt_atom": "///a/1220/O2'", "aa_atom": "///m/102/O", "dist": 2.744, "type": "sugar:backbone" }, { "index": 88, "nt_atom": "///a/1283/O2'", "aa_atom": "///g/35/NZ", "dist": 2.398, "type": "sugar:sidechain" }, { "index": 89, "nt_atom": "///a/1291/O2'", "aa_atom": "///g/114/NZ", "dist": 2.748, "type": "sugar:sidechain" }, { "index": 90, "nt_atom": "///a/1300/O2'", "aa_atom": "///m/108/OG1", "dist": 3.615, "type": "sugar:sidechain" }, { "index": 91, "nt_atom": "///a/1311/O2'", "aa_atom": "///n/49/NE2", "dist": 3.856, "type": "sugar:sidechain" }, { "index": 92, "nt_atom": "///a/1315/O2'", "aa_atom": "///s/77/OG1", "dist": 3.534, "type": "sugar:sidechain" }, { "index": 93, "nt_atom": "///a/1315/O2'", "aa_atom": "///s/78/NH2", "dist": 3.083, "type": "sugar:sidechain" }, { "index": 94, "nt_atom": "///a/1324/O2'", "aa_atom": "///m/70/NH2", "dist": 2.509, "type": "sugar:sidechain" }, { "index": 95, "nt_atom": "///a/1336/O4'", "aa_atom": "///i/126/NE2", "dist": 3.763, "type": "sugar:sidechain" }, { "index": 96, "nt_atom": "///a/1344/O2'", "aa_atom": "///g/33/OG", "dist": 2.333, "type": "sugar:sidechain" }, { "index": 97, "nt_atom": "///a/1366/O2'", "aa_atom": "///g/34/O", "dist": 2.892, "type": "sugar:backbone" }, { "index": 98, "nt_atom": "///a/1368/O2'", "aa_atom": "///g/28/O", "dist": 3.556, "type": "sugar:backbone" }, { "index": 99, "nt_atom": "///a/1372/O4'", "aa_atom": "///g/92/NH1", "dist": 3.256, "type": "sugar:sidechain" }, { "index": 100, "nt_atom": "///a/1376/O2'", "aa_atom": "///g/79/NH2", "dist": 2.401, "type": "sugar:sidechain" }, { "index": 101, "nt_atom": "///a/1450/O2'", "aa_atom": "///t/31/OH", "dist": 3.602, "type": "sugar:sidechain" }, { "index": 102, "nt_atom": "///a/1452/O2'", "aa_atom": "///t/23/OG", "dist": 3.549, "type": "sugar:sidechain" }, { "index": 103, "nt_atom": "///A/6/O2'", "aa_atom": "///J/131/O", "dist": 3.771, "type": "sugar:backbone" }, { "index": 104, "nt_atom": "///A/6/O2'", "aa_atom": "///J/132/ND1", "dist": 3.279, "type": "sugar:sidechain" }, { "index": 105, "nt_atom": "///A/24/O2'", "aa_atom": "///S/78/O", "dist": 2.560, "type": "sugar:backbone" }, { "index": 106, "nt_atom": "///A/29/O4'", "aa_atom": "///Q/11/NH2", "dist": 3.820, "type": "sugar:sidechain" }, { "index": 107, "nt_atom": "///A/29/O2'", "aa_atom": "///Q/11/NH1", "dist": 3.790, "type": "sugar:sidechain" }, { "index": 108, "nt_atom": "///A/37/O2'", "aa_atom": "///E/44/O", "dist": 3.725, "type": "sugar:backbone" }, { "index": 109, "nt_atom": "///A/38/O2'", "aa_atom": "///E/42/OG", "dist": 3.100, "type": "sugar:sidechain" }, { "index": 110, "nt_atom": "///A/54/O2'", "aa_atom": "///4/35/NE", "dist": 2.616, "type": "sugar:sidechain" }, { "index": 111, "nt_atom": "///A/61/O2'", "aa_atom": "///Y/32/NZ", "dist": 3.137, "type": "sugar:sidechain" }, { "index": 112, "nt_atom": "///A/63/O2'", "aa_atom": "///T/76/NH2", "dist": 3.301, "type": "sugar:sidechain" }, { "index": 113, "nt_atom": "///A/76/O2'", "aa_atom": "///Y/55/OG1", "dist": 2.937, "type": "sugar:sidechain" }, { "index": 114, "nt_atom": "///A/77/O2'", "aa_atom": "///Y/6/NH2", "dist": 2.470, "type": "sugar:sidechain" }, { "index": 115, "nt_atom": "///A/77/O2'", "aa_atom": "///Y/59/NE2", "dist": 3.042, "type": "sugar:sidechain" }, { "index": 116, "nt_atom": "///A/96/O2'", "aa_atom": "///Y/40/N", "dist": 3.102, "type": "sugar:backbone" }, { "index": 117, "nt_atom": "///A/96/O2'", "aa_atom": "///Y/41/N", "dist": 3.096, "type": "sugar:backbone" }, { "index": 118, "nt_atom": "///A/96/O2'", "aa_atom": "///Y/41/ND1", "dist": 3.156, "type": "sugar:sidechain" }, { "index": 119, "nt_atom": "///A/242/O2'", "aa_atom": "///5/6/N", "dist": 3.902, "type": "sugar:backbone" }, { "index": 120, "nt_atom": "///A/249/O2'", "aa_atom": "///L/63/NZ", "dist": 2.756, "type": "sugar:sidechain" }, { "index": 121, "nt_atom": "///A/302/O2'", "aa_atom": "///U/16/NZ", "dist": 2.629, "type": "sugar:sidechain" }, { "index": 122, "nt_atom": "///A/317/O2'", "aa_atom": "///E/162/O", "dist": 2.995, "type": "sugar:backbone" }, { "index": 123, "nt_atom": "///A/329/O2'", "aa_atom": "///U/67/O", "dist": 3.184, "type": "sugar:backbone" }, { "index": 124, "nt_atom": "///A/330/O4'", "aa_atom": "///U/67/OG", "dist": 3.305, "type": "sugar:sidechain" }, { "index": 125, "nt_atom": "///A/334/O2'", "aa_atom": "///E/161/NH1", "dist": 3.307, "type": "sugar:sidechain" }, { "index": 126, "nt_atom": "///A/362/O2'", "aa_atom": "///X/61/NZ", "dist": 2.695, "type": "sugar:sidechain" }, { "index": 127, "nt_atom": "///A/363/O4'", "aa_atom": "///X/61/NZ", "dist": 2.621, "type": "sugar:sidechain" }, { "index": 128, "nt_atom": "///A/363/O2'", "aa_atom": "///X/54/NZ", "dist": 3.426, "type": "sugar:sidechain" }, { "index": 129, "nt_atom": "///A/371/O2'", "aa_atom": "///X/16/N", "dist": 3.588, "type": "sugar:backbone" }, { "index": 130, "nt_atom": "///A/387/O2'", "aa_atom": "///X/30/O", "dist": 2.777, "type": "sugar:backbone" }, { "index": 131, "nt_atom": "///A/432/O2'", "aa_atom": "///E/40/NE2", "dist": 2.543, "type": "sugar:sidechain" }, { "index": 132, "nt_atom": "///A/433/O4'", "aa_atom": "///E/40/NE2", "dist": 2.779, "type": "sugar:sidechain" }, { "index": 133, "nt_atom": "///A/439/O4'", "aa_atom": "///E/78/NH1", "dist": 3.158, "type": "sugar:sidechain" }, { "index": 134, "nt_atom": "///A/456/O2'", "aa_atom": "///4/21/NH1", "dist": 3.276, "type": "sugar:sidechain" }, { "index": 135, "nt_atom": "///A/471/O2'", "aa_atom": "///U/42/O", "dist": 2.601, "type": "sugar:backbone" }, { "index": 136, "nt_atom": "///A/473/O2'", "aa_atom": "///U/44/ND1", "dist": 3.648, "type": "sugar:sidechain" }, { "index": 137, "nt_atom": "///A/474/O2'", "aa_atom": "///U/55/O", "dist": 2.722, "type": "sugar:backbone" }, { "index": 138, "nt_atom": "///A/476/O2'", "aa_atom": "///S/60/NE2", "dist": 3.330, "type": "sugar:sidechain" }, { "index": 139, "nt_atom": "///A/479/O2'", "aa_atom": "///S/49/NZ", "dist": 3.176, "type": "sugar:sidechain" }, { "index": 140, "nt_atom": "///A/484/O2'", "aa_atom": "///S/8/N", "dist": 3.635, "type": "sugar:backbone" }, { "index": 141, "nt_atom": "///A/485/O2'", "aa_atom": "///S/6/N", "dist": 3.409, "type": "sugar:backbone" }, { "index": 142, "nt_atom": "///A/487/O2'", "aa_atom": "///S/61/ND2", "dist": 3.117, "type": "sugar:sidechain" }, { "index": 143, "nt_atom": "///A/489/O2'", "aa_atom": "///U/44/NE2", "dist": 2.944, "type": "sugar:sidechain" }, { "index": 144, "nt_atom": "///A/508/O2'", "aa_atom": "///S/18/NH2", "dist": 2.997, "type": "sugar:sidechain" }, { "index": 145, "nt_atom": "///A/525/O2'", "aa_atom": "///Q/49/OD2", "dist": 2.229, "type": "sugar:sidechain" }, { "index": 146, "nt_atom": "///A/529/O2'", "aa_atom": "///J/9/OE1", "dist": 3.800, "type": "sugar:sidechain" }, { "index": 147, "nt_atom": "///A/547/O2'", "aa_atom": "///J/47/O", "dist": 2.331, "type": "sugar:backbone" }, { "index": 148, "nt_atom": "///A/550/O2'", "aa_atom": "///Q/52/NE2", "dist": 3.151, "type": "sugar:sidechain" }, { "index": 149, "nt_atom": "///A/551/O2'", "aa_atom": "///Q/45/OH", "dist": 3.039, "type": "sugar:sidechain" }, { "index": 150, "nt_atom": "///A/583/O2'", "aa_atom": "///5/64/OXT", "dist": 2.486, "type": "sugar:sidechain" }, { "index": 151, "nt_atom": "///A/621/O2'", "aa_atom": "///L/66/N", "dist": 3.336, "type": "sugar:backbone" }, { "index": 152, "nt_atom": "///A/648/O2'", "aa_atom": "///E/96/OD1", "dist": 2.890, "type": "sugar:sidechain" }, { "index": 153, "nt_atom": "///A/649/O2'", "aa_atom": "///E/94/O", "dist": 2.464, "type": "sugar:backbone" }, { "index": 154, "nt_atom": "///A/650/O4'", "aa_atom": "///E/29/NE2", "dist": 3.295, "type": "sugar:sidechain" }, { "index": 155, "nt_atom": "///A/651/O2'", "aa_atom": "///L/14/N", "dist": 2.988, "type": "sugar:backbone" }, { "index": 156, "nt_atom": "///A/652/O2'", "aa_atom": "///L/14/NE", "dist": 3.205, "type": "sugar:sidechain" }, { "index": 157, "nt_atom": "///A/664/O2'", "aa_atom": "///E/61/OE1", "dist": 3.592, "type": "sugar:sidechain" }, { "index": 158, "nt_atom": "///A/665/O2'", "aa_atom": "///E/61/NE2", "dist": 2.488, "type": "sugar:sidechain" }, { "index": 159, "nt_atom": "///A/676/O2'", "aa_atom": "///4/4/O", "dist": 3.235, "type": "sugar:backbone" }, { "index": 160, "nt_atom": "///A/676/O2'", "aa_atom": "///4/6/N", "dist": 3.242, "type": "sugar:backbone" }, { "index": 161, "nt_atom": "///A/681/O4'", "aa_atom": "///C/43/NH2", "dist": 3.334, "type": "sugar:sidechain" }, { "index": 162, "nt_atom": "///A/681/O2'", "aa_atom": "///C/43/NE", "dist": 3.491, "type": "sugar:sidechain" }, { "index": 163, "nt_atom": "///A/720/O4'", "aa_atom": "///C/10/OG", "dist": 3.439, "type": "sugar:sidechain" }, { "index": 164, "nt_atom": "///A/772/O2'", "aa_atom": "///C/224/O", "dist": 2.328, "type": "sugar:backbone" }, { "index": 165, "nt_atom": "///A/800/O2'", "aa_atom": "///L/20/O", "dist": 3.282, "type": "sugar:backbone" }, { "index": 166, "nt_atom": "///A/816/O2'", "aa_atom": "///L/52/O", "dist": 3.641, "type": "sugar:backbone" }, { "index": 167, "nt_atom": "///A/823/O4'", "aa_atom": "///L/51/O", "dist": 2.902, "type": "sugar:backbone" }, { "index": 168, "nt_atom": "///A/823/O2'", "aa_atom": "///5/56/NH2", "dist": 2.767, "type": "sugar:sidechain" }, { "index": 169, "nt_atom": "///A/824/O4'", "aa_atom": "///5/56/NH2", "dist": 2.933, "type": "sugar:sidechain" }, { "index": 170, "nt_atom": "///A/840/O2'", "aa_atom": "///Z/42/O", "dist": 3.456, "type": "sugar:backbone" }, { "index": 171, "nt_atom": "///A/845/O2'", "aa_atom": "///W/27/N", "dist": 3.332, "type": "sugar:backbone" }, { "index": 172, "nt_atom": "///A/862/O2'", "aa_atom": "///M/65/NE1", "dist": 3.642, "type": "sugar:sidechain" }, { "index": 173, "nt_atom": "///A/877/O4'", "aa_atom": "///m/92/NE", "dist": 2.716, "type": "sugar:sidechain" }, { "index": 174, "nt_atom": "///A/897/O2'", "aa_atom": "///M/71/OD2", "dist": 3.360, "type": "sugar:sidechain" }, { "index": 175, "nt_atom": "///A/912/O4'", "aa_atom": "///W/29/NE2", "dist": 2.694, "type": "sugar:sidechain" }, { "index": 176, "nt_atom": "///A/918/O2'", "aa_atom": "///Z/24/O", "dist": 3.047, "type": "sugar:backbone" }, { "index": 177, "nt_atom": "///A/966/O2'", "aa_atom": "///Q/55/NH2", "dist": 3.750, "type": "sugar:sidechain" }, { "index": 178, "nt_atom": "///A/985/O2'", "aa_atom": "///Q/93/NZ", "dist": 3.624, "type": "sugar:sidechain" }, { "index": 179, "nt_atom": "///A/986/O2'", "aa_atom": "///Q/91/OD2", "dist": 2.906, "type": "sugar:sidechain" }, { "index": 180, "nt_atom": "///A/986/O2'", "aa_atom": "///R/9/O", "dist": 3.850, "type": "sugar:backbone" }, { "index": 181, "nt_atom": "///A/995/O2'", "aa_atom": "///J/30/OG1", "dist": 3.205, "type": "sugar:sidechain" }, { "index": 182, "nt_atom": "///A/996/O4'", "aa_atom": "///J/30/OG1", "dist": 3.147, "type": "sugar:sidechain" }, { "index": 183, "nt_atom": "///A/996/O2'", "aa_atom": "///J/108/O", "dist": 2.857, "type": "sugar:backbone" }, { "index": 184, "nt_atom": "///A/1003/O2'", "aa_atom": "///Q/78/NH2", "dist": 3.928, "type": "sugar:sidechain" }, { "index": 185, "nt_atom": "///A/1021/O2'", "aa_atom": "///6/7/O", "dist": 3.009, "type": "sugar:backbone" }, { "index": 186, "nt_atom": "///A/1048/O2'", "aa_atom": "///I/118/OG1", "dist": 2.516, "type": "sugar:sidechain" }, { "index": 187, "nt_atom": "///A/1049/O2'", "aa_atom": "///I/72/NZ", "dist": 2.384, "type": "sugar:sidechain" }, { "index": 188, "nt_atom": "///A/1053/O2'", "aa_atom": "///I/90/O", "dist": 3.255, "type": "sugar:backbone" }, { "index": 189, "nt_atom": "///A/1060/O2'", "aa_atom": "///I/10/NZ", "dist": 3.535, "type": "sugar:sidechain" }, { "index": 190, "nt_atom": "///A/1066/O2'", "aa_atom": "///I/92/NE", "dist": 2.895, "type": "sugar:sidechain" }, { "index": 191, "nt_atom": "///A/1066/O2'", "aa_atom": "///I/93/O", "dist": 3.142, "type": "sugar:backbone" }, { "index": 192, "nt_atom": "///A/1067/O2'", "aa_atom": "///I/94/OD1", "dist": 2.322, "type": "sugar:sidechain" }, { "index": 193, "nt_atom": "///A/1067/O2'", "aa_atom": "///I/134/O", "dist": 2.361, "type": "sugar:backbone" }, { "index": 194, "nt_atom": "///A/1070/O2'", "aa_atom": "///I/127/O", "dist": 2.569, "type": "sugar:backbone" }, { "index": 195, "nt_atom": "///A/1080/O2'", "aa_atom": "///6/12/NH2", "dist": 3.087, "type": "sugar:sidechain" }, { "index": 196, "nt_atom": "///A/1081/O4'", "aa_atom": "///6/12/NH2", "dist": 2.890, "type": "sugar:sidechain" }, { "index": 197, "nt_atom": "///A/1092/O4'", "aa_atom": "///6/12/NH1", "dist": 3.801, "type": "sugar:sidechain" }, { "index": 198, "nt_atom": "///A/1114/O2'", "aa_atom": "///6/37/OE1", "dist": 2.396, "type": "sugar:sidechain" }, { "index": 199, "nt_atom": "///A/1114/O2'", "aa_atom": "///6/38/O", "dist": 3.061, "type": "sugar:backbone" }, { "index": 200, "nt_atom": "///A/1128/O2'", "aa_atom": "///J/104/O", "dist": 2.701, "type": "sugar:backbone" }, { "index": 201, "nt_atom": "///A/1130/O2'", "aa_atom": "///J/27/NH2", "dist": 3.333, "type": "sugar:sidechain" }, { "index": 202, "nt_atom": "///A/1153/O2'", "aa_atom": "///R/91/NE2", "dist": 2.873, "type": "sugar:sidechain" }, { "index": 203, "nt_atom": "///A/1184/O2'", "aa_atom": "///Q/12/NH2", "dist": 3.697, "type": "sugar:sidechain" }, { "index": 204, "nt_atom": "///A/1211/O2'", "aa_atom": "///R/88/N", "dist": 3.246, "type": "sugar:backbone" }, { "index": 205, "nt_atom": "///A/1231/O2'", "aa_atom": "///E/28/NE2", "dist": 2.979, "type": "sugar:sidechain" }, { "index": 206, "nt_atom": "///A/1233/O2'", "aa_atom": "///E/39/NH1", "dist": 3.236, "type": "sugar:sidechain" }, { "index": 207, "nt_atom": "///A/1235/O2'", "aa_atom": "///Q/4/N", "dist": 3.955, "type": "sugar:backbone" }, { "index": 208, "nt_atom": "///A/1240/O4'", "aa_atom": "///Q/33/NH1", "dist": 3.281, "type": "sugar:sidechain" }, { "index": 209, "nt_atom": "///A/1244/O2'", "aa_atom": "///E/78/N", "dist": 2.890, "type": "sugar:backbone" }, { "index": 210, "nt_atom": "///A/1250/O2'", "aa_atom": "///2/4/OE1", "dist": 3.406, "type": "sugar:sidechain" }, { "index": 211, "nt_atom": "///A/1250/O2'", "aa_atom": "///2/8/N", "dist": 3.427, "type": "sugar:backbone" }, { "index": 212, "nt_atom": "///A/1263/O2'", "aa_atom": "///N/16/NE2", "dist": 3.180, "type": "sugar:sidechain" }, { "index": 213, "nt_atom": "///A/1309/O2'", "aa_atom": "///S/84/NH1", "dist": 3.114, "type": "sugar:sidechain" }, { "index": 214, "nt_atom": "///A/1440/O4'", "aa_atom": "///N/73/NZ", "dist": 3.047, "type": "sugar:sidechain" }, { "index": 215, "nt_atom": "///A/1478/O2'", "aa_atom": "///C/100/OE1", "dist": 3.191, "type": "sugar:sidechain" }, { "index": 216, "nt_atom": "///A/1487/O2'", "aa_atom": "///C/101/NH1", "dist": 3.617, "type": "sugar:sidechain" }, { "index": 217, "nt_atom": "///A/1488/O2'", "aa_atom": "///C/97/O", "dist": 2.877, "type": "sugar:backbone" }, { "index": 218, "nt_atom": "///A/1602/O2'", "aa_atom": "///4/5/O", "dist": 2.684, "type": "sugar:backbone" }, { "index": 219, "nt_atom": "///A/1603/O2'", "aa_atom": "///4/3/NE", "dist": 2.900, "type": "sugar:sidechain" }, { "index": 220, "nt_atom": "///A/1639/O2'", "aa_atom": "///N/106/OD2", "dist": 2.454, "type": "sugar:sidechain" }, { "index": 221, "nt_atom": "///A/1644/O2'", "aa_atom": "///D/118/O", "dist": 3.202, "type": "sugar:backbone" }, { "index": 222, "nt_atom": "///A/1645/O4'", "aa_atom": "///D/118/O", "dist": 3.136, "type": "sugar:backbone" }, { "index": 223, "nt_atom": "///A/1656/O2'", "aa_atom": "///K/3/OE1", "dist": 3.050, "type": "sugar:sidechain" }, { "index": 224, "nt_atom": "///A/1656/O2'", "aa_atom": "///K/6/OG", "dist": 2.881, "type": "sugar:sidechain" }, { "index": 225, "nt_atom": "///A/1683/O2'", "aa_atom": "///C/14/NH1", "dist": 2.519, "type": "sugar:sidechain" }, { "index": 226, "nt_atom": "///A/1778/O2'", "aa_atom": "///C/206/N", "dist": 3.177, "type": "sugar:backbone" }, { "index": 227, "nt_atom": "///A/1783/O2'", "aa_atom": "///C/253/O", "dist": 3.426, "type": "sugar:backbone" }, { "index": 228, "nt_atom": "///A/1783/O2'", "aa_atom": "///C/255/N", "dist": 2.852, "type": "sugar:backbone" }, { "index": 229, "nt_atom": "///A/1784/O2'", "aa_atom": "///C/258/OG1", "dist": 3.286, "type": "sugar:sidechain" }, { "index": 230, "nt_atom": "///A/1787/O2'", "aa_atom": "///C/153/OE1", "dist": 3.052, "type": "sugar:sidechain" }, { "index": 231, "nt_atom": "///A/1792/O2'", "aa_atom": "///C/50/O", "dist": 3.836, "type": "sugar:backbone" }, { "index": 232, "nt_atom": "///A/1793/O2'", "aa_atom": "///C/46/ND2", "dist": 2.894, "type": "sugar:sidechain" }, { "index": 233, "nt_atom": "///A/1795/O2'", "aa_atom": "///X/3/NH1", "dist": 3.933, "type": "sugar:sidechain" }, { "index": 234, "nt_atom": "///A/1799/O2'", "aa_atom": "///C/45/N", "dist": 3.157, "type": "sugar:backbone" }, { "index": 235, "nt_atom": "///A/1800/O2'", "aa_atom": "///C/50/OG1", "dist": 3.040, "type": "sugar:sidechain" }, { "index": 236, "nt_atom": "///A/1801/O4'", "aa_atom": "///C/51/OG1", "dist": 3.602, "type": "sugar:sidechain" }, { "index": 237, "nt_atom": "///A/1805/O2'", "aa_atom": "///C/153/O", "dist": 2.748, "type": "sugar:backbone" }, { "index": 238, "nt_atom": "///A/1807/O2'", "aa_atom": "///C/158/O", "dist": 3.083, "type": "sugar:backbone" }, { "index": 239, "nt_atom": "///A/1811/O2'", "aa_atom": "///C/253/OG1", "dist": 2.753, "type": "sugar:sidechain" }, { "index": 240, "nt_atom": "///A/1830/O2'", "aa_atom": "///C/255/O", "dist": 2.250, "type": "sugar:backbone" }, { "index": 241, "nt_atom": "///A/1980/O2'", "aa_atom": "///D/133/OG1", "dist": 3.626, "type": "sugar:sidechain" }, { "index": 242, "nt_atom": "///A/1996/O4'", "aa_atom": "///N/107/OD1", "dist": 2.934, "type": "sugar:sidechain" }, { "index": 243, "nt_atom": "///A/2003/O2'", "aa_atom": "///2/4/O", "dist": 2.766, "type": "sugar:backbone" }, { "index": 244, "nt_atom": "///A/2032/O2'", "aa_atom": "///2/19/NE2", "dist": 2.969, "type": "sugar:sidechain" }, { "index": 245, "nt_atom": "///A/2036/O2'", "aa_atom": "///D/162/OG", "dist": 3.543, "type": "sugar:sidechain" }, { "index": 246, "nt_atom": "///A/2039/O4'", "aa_atom": "///D/147/N", "dist": 3.516, "type": "sugar:backbone" }, { "index": 247, "nt_atom": "///A/2039/O2'", "aa_atom": "///D/148/O", "dist": 2.546, "type": "sugar:backbone" }, { "index": 248, "nt_atom": "///A/2039/O2'", "aa_atom": "///D/149/O", "dist": 2.878, "type": "sugar:backbone" }, { "index": 249, "nt_atom": "///A/2040/O4'", "aa_atom": "///D/153/O", "dist": 3.096, "type": "sugar:backbone" }, { "index": 250, "nt_atom": "///A/2043/O2'", "aa_atom": "///2/5/NE2", "dist": 3.036, "type": "sugar:sidechain" }, { "index": 251, "nt_atom": "///A/2047/O2'", "aa_atom": "///E/62/NZ", "dist": 2.900, "type": "sugar:sidechain" }, { "index": 252, "nt_atom": "///A/2066/O2'", "aa_atom": "///X/23/OD1", "dist": 2.806, "type": "sugar:sidechain" }, { "index": 253, "nt_atom": "///A/2191/O2'", "aa_atom": "///C/148/O", "dist": 2.937, "type": "sugar:backbone" }, { "index": 254, "nt_atom": "///A/2262/O2'", "aa_atom": "///M/84/O", "dist": 2.288, "type": "sugar:backbone" }, { "index": 255, "nt_atom": "///A/2289/O2'", "aa_atom": "///F/122/O", "dist": 3.867, "type": "sugar:backbone" }, { "index": 256, "nt_atom": "///A/2300/O2'", "aa_atom": "///F/35/OG1", "dist": 3.443, "type": "sugar:sidechain" }, { "index": 257, "nt_atom": "///A/2301/O2'", "aa_atom": "///F/157/OG1", "dist": 3.561, "type": "sugar:sidechain" }, { "index": 258, "nt_atom": "///A/2303/O2'", "aa_atom": "///F/125/NH2", "dist": 2.405, "type": "sugar:sidechain" }, { "index": 259, "nt_atom": "///A/2318/O2'", "aa_atom": "///W/42/O", "dist": 2.580, "type": "sugar:backbone" }, { "index": 260, "nt_atom": "///A/2333/O2'", "aa_atom": "///3/34/NZ", "dist": 3.649, "type": "sugar:sidechain" }, { "index": 261, "nt_atom": "///A/2334/O2'", "aa_atom": "///3/17/OH", "dist": 3.498, "type": "sugar:sidechain" }, { "index": 262, "nt_atom": "///A/2340/O2'", "aa_atom": "///W/34/N", "dist": 3.679, "type": "sugar:backbone" }, { "index": 263, "nt_atom": "///A/2341/O2'", "aa_atom": "///W/36/N", "dist": 3.202, "type": "sugar:backbone" }, { "index": 264, "nt_atom": "///A/2342/O2'", "aa_atom": "///W/39/NE", "dist": 3.759, "type": "sugar:sidechain" }, { "index": 265, "nt_atom": "///A/2343/O2'", "aa_atom": "///W/20/NH1", "dist": 3.843, "type": "sugar:sidechain" }, { "index": 266, "nt_atom": "///A/2346/O2'", "aa_atom": "///5/53/OD2", "dist": 3.148, "type": "sugar:sidechain" }, { "index": 267, "nt_atom": "///A/2350/O2'", "aa_atom": "///W/39/NH2", "dist": 2.845, "type": "sugar:sidechain" }, { "index": 268, "nt_atom": "///A/2357/O2'", "aa_atom": "///3/35/OH", "dist": 3.929, "type": "sugar:sidechain" }, { "index": 269, "nt_atom": "///A/2358/O2'", "aa_atom": "///3/42/ND1", "dist": 2.820, "type": "sugar:sidechain" }, { "index": 270, "nt_atom": "///A/2363/O2'", "aa_atom": "///O/110/NH2", "dist": 3.192, "type": "sugar:sidechain" }, { "index": 271, "nt_atom": "///A/2379/O2'", "aa_atom": "///L/60/O", "dist": 3.454, "type": "sugar:backbone" }, { "index": 272, "nt_atom": "///A/2380/O2'", "aa_atom": "///5/13/NH2", "dist": 2.885, "type": "sugar:sidechain" }, { "index": 273, "nt_atom": "///A/2386/O2'", "aa_atom": "///3/14/O", "dist": 3.736, "type": "sugar:backbone" }, { "index": 274, "nt_atom": "///A/2407/O2'", "aa_atom": "///3/51/NZ", "dist": 2.752, "type": "sugar:sidechain" }, { "index": 275, "nt_atom": "///A/2415/O2'", "aa_atom": "///L/55/N", "dist": 3.794, "type": "sugar:backbone" }, { "index": 276, "nt_atom": "///A/2446/O2'", "aa_atom": "///M/76/NZ", "dist": 3.315, "type": "sugar:sidechain" }, { "index": 277, "nt_atom": "///A/2470/O2'", "aa_atom": "///M/49/OG", "dist": 3.169, "type": "sugar:sidechain" }, { "index": 278, "nt_atom": "///A/2470/O2'", "aa_atom": "///M/52/NH1", "dist": 2.779, "type": "sugar:sidechain" }, { "index": 279, "nt_atom": "///A/2471/O4'", "aa_atom": "///M/49/OG", "dist": 3.324, "type": "sugar:sidechain" }, { "index": 280, "nt_atom": "///A/2471/O2'", "aa_atom": "///M/124/O", "dist": 3.065, "type": "sugar:backbone" }, { "index": 281, "nt_atom": "///A/2480/O2'", "aa_atom": "///M/80/OE2", "dist": 2.707, "type": "sugar:sidechain" }, { "index": 282, "nt_atom": "///A/2481/O2'", "aa_atom": "///M/80/N", "dist": 3.643, "type": "sugar:backbone" }, { "index": 283, "nt_atom": "///A/2499/O2'", "aa_atom": "///D/159/NZ", "dist": 3.112, "type": "sugar:sidechain" }, { "index": 284, "nt_atom": "///A/2513/O2'", "aa_atom": "///6/1/N", "dist": 2.727, "type": "sugar:backbone" }, { "index": 285, "nt_atom": "///A/2558/O2'", "aa_atom": "///D/151/O", "dist": 2.693, "type": "sugar:backbone" }, { "index": 286, "nt_atom": "///A/2561/O2'", "aa_atom": "///D/149/N", "dist": 3.093, "type": "sugar:backbone" }, { "index": 287, "nt_atom": "///A/2566/O2'", "aa_atom": "///D/136/OD1", "dist": 2.614, "type": "sugar:sidechain" }, { "index": 288, "nt_atom": "///A/2583/O2'", "aa_atom": "///C/242/O", "dist": 3.863, "type": "sugar:backbone" }, { "index": 289, "nt_atom": "///A/2601/O4'", "aa_atom": "///2/2/N", "dist": 3.191, "type": "sugar:backbone" }, { "index": 290, "nt_atom": "///A/2605/O2'", "aa_atom": "///D/155/N", "dist": 3.170, "type": "sugar:backbone" }, { "index": 291, "nt_atom": "///A/2605/O2'", "aa_atom": "///D/155/O", "dist": 3.038, "type": "sugar:backbone" }, { "index": 292, "nt_atom": "///A/2607/O2'", "aa_atom": "///D/124/NH2", "dist": 3.242, "type": "sugar:sidechain" }, { "index": 293, "nt_atom": "///A/2620/O2'", "aa_atom": "///D/62/OG1", "dist": 3.246, "type": "sugar:sidechain" }, { "index": 294, "nt_atom": "///A/2622/O2'", "aa_atom": "///D/50/NE2", "dist": 2.969, "type": "sugar:sidechain" }, { "index": 295, "nt_atom": "///A/2622/O2'", "aa_atom": "///D/82/OE1", "dist": 2.483, "type": "sugar:sidechain" }, { "index": 296, "nt_atom": "///A/2640/O2'", "aa_atom": "///G/110/OG", "dist": 3.133, "type": "sugar:sidechain" }, { "index": 297, "nt_atom": "///A/2644/O2'", "aa_atom": "///G/160/NZ", "dist": 2.532, "type": "sugar:sidechain" }, { "index": 298, "nt_atom": "///A/2655/O4'", "aa_atom": "///G/111/ND1", "dist": 3.730, "type": "sugar:sidechain" }, { "index": 299, "nt_atom": "///A/2661/O2'", "aa_atom": "///K/28/N", "dist": 3.679, "type": "sugar:backbone" }, { "index": 300, "nt_atom": "///A/2670/O2'", "aa_atom": "///D/14/NH2", "dist": 3.495, "type": "sugar:sidechain" }, { "index": 301, "nt_atom": "///A/2671/O4'", "aa_atom": "///K/70/NH1", "dist": 2.877, "type": "sugar:sidechain" }, { "index": 302, "nt_atom": "///A/2694/O2'", "aa_atom": "///N/71/NH1", "dist": 2.925, "type": "sugar:sidechain" }, { "index": 303, "nt_atom": "///A/2695/O4'", "aa_atom": "///N/71/NH1", "dist": 2.716, "type": "sugar:sidechain" }, { "index": 304, "nt_atom": "///A/2704/O2'", "aa_atom": "///P/95/NZ", "dist": 2.716, "type": "sugar:sidechain" }, { "index": 305, "nt_atom": "///A/2709/O2'", "aa_atom": "///N/3/O", "dist": 2.661, "type": "sugar:backbone" }, { "index": 306, "nt_atom": "///A/2717/O2'", "aa_atom": "///D/173/O", "dist": 3.073, "type": "sugar:backbone" }, { "index": 307, "nt_atom": "///A/2732/O2'", "aa_atom": "///G/139/O", "dist": 3.156, "type": "sugar:backbone" }, { "index": 308, "nt_atom": "///A/2734/O2'", "aa_atom": "///G/67/OG1", "dist": 3.469, "type": "sugar:sidechain" }, { "index": 309, "nt_atom": "///A/2735/O2'", "aa_atom": "///G/63/O", "dist": 2.999, "type": "sugar:backbone" }, { "index": 310, "nt_atom": "///A/2736/O2'", "aa_atom": "///G/62/NH2", "dist": 3.283, "type": "sugar:sidechain" }, { "index": 311, "nt_atom": "///A/2740/O2'", "aa_atom": "///6/15/NZ", "dist": 3.396, "type": "sugar:sidechain" }, { "index": 312, "nt_atom": "///A/2744/O2'", "aa_atom": "///G/60/NE2", "dist": 2.983, "type": "sugar:sidechain" }, { "index": 313, "nt_atom": "///A/2747/O2'", "aa_atom": "///G/139/NE2", "dist": 3.503, "type": "sugar:sidechain" }, { "index": 314, "nt_atom": "///A/2748/O2'", "aa_atom": "///G/147/OE2", "dist": 3.660, "type": "sugar:sidechain" }, { "index": 315, "nt_atom": "///A/2758/O2'", "aa_atom": "///D/208/NZ", "dist": 3.608, "type": "sugar:sidechain" }, { "index": 316, "nt_atom": "///A/2760/O2'", "aa_atom": "///D/168/OE2", "dist": 2.481, "type": "sugar:sidechain" }, { "index": 317, "nt_atom": "///A/2771/O4'", "aa_atom": "///D/44/OD1", "dist": 3.332, "type": "sugar:sidechain" }, { "index": 318, "nt_atom": "///A/2773/O2'", "aa_atom": "///D/63/O", "dist": 3.835, "type": "sugar:backbone" }, { "index": 319, "nt_atom": "///A/2773/O2'", "aa_atom": "///D/64/O", "dist": 2.807, "type": "sugar:backbone" }, { "index": 320, "nt_atom": "///A/2801/O2'", "aa_atom": "///2/23/OE2", "dist": 2.900, "type": "sugar:sidechain" }, { "index": 321, "nt_atom": "///A/2802/O2'", "aa_atom": "///2/40/ND1", "dist": 3.217, "type": "sugar:sidechain" }, { "index": 322, "nt_atom": "///A/2825/O2'", "aa_atom": "///N/45/NE", "dist": 3.064, "type": "sugar:sidechain" }, { "index": 323, "nt_atom": "///A/2826/O2'", "aa_atom": "///N/93/N", "dist": 3.291, "type": "sugar:backbone" }, { "index": 324, "nt_atom": "///A/2838/O2'", "aa_atom": "///N/64/NH1", "dist": 3.227, "type": "sugar:sidechain" }, { "index": 325, "nt_atom": "///A/2867/O2'", "aa_atom": "///N/92/O", "dist": 2.817, "type": "sugar:backbone" }, { "index": 326, "nt_atom": "///A/2867/O2'", "aa_atom": "///N/93/O", "dist": 2.987, "type": "sugar:backbone" }, { "index": 327, "nt_atom": "///A/2871/O4'", "aa_atom": "///2/49/NH2", "dist": 2.541, "type": "sugar:sidechain" }, { "index": 328, "nt_atom": "///A/2885/O2'", "aa_atom": "///J/134/O", "dist": 2.611, "type": "sugar:backbone" }, { "index": 329, "nt_atom": "///B/8/O2'", "aa_atom": "///O/26/NH2", "dist": 3.385, "type": "sugar:sidechain" }, { "index": 330, "nt_atom": "///B/8/O2'", "aa_atom": "///O/45/O", "dist": 2.698, "type": "sugar:backbone" }, { "index": 331, "nt_atom": "///B/9/O2'", "aa_atom": "///O/44/O", "dist": 3.837, "type": "sugar:backbone" }, { "index": 332, "nt_atom": "///B/42/O2'", "aa_atom": "///F/63/NE2", "dist": 2.937, "type": "sugar:sidechain" }, { "index": 333, "nt_atom": "///B/42/O2'", "aa_atom": "///F/64/O", "dist": 2.965, "type": "sugar:backbone" }, { "index": 334, "nt_atom": "///B/43/O4'", "aa_atom": "///F/63/NE2", "dist": 3.123, "type": "sugar:sidechain" }, { "index": 335, "nt_atom": "///B/43/O2'", "aa_atom": "///F/92/N", "dist": 3.712, "type": "sugar:backbone" }, { "index": 336, "nt_atom": "///B/75/O2'", "aa_atom": "///V/11/NH1", "dist": 3.584, "type": "sugar:sidechain" }, { "index": 337, "nt_atom": "///B/76/O2'", "aa_atom": "///V/81/OE1", "dist": 2.906, "type": "sugar:sidechain" }, { "index": 338, "nt_atom": "///B/76/O2'", "aa_atom": "///V/81/NE2", "dist": 3.112, "type": "sugar:sidechain" }, { "index": 339, "nt_atom": "///B/77/O4'", "aa_atom": "///V/81/NE2", "dist": 3.122, "type": "sugar:sidechain" }, { "index": 340, "nt_atom": "///B/103/O2'", "aa_atom": "///V/34/OH", "dist": 2.796, "type": "sugar:sidechain" }, { "index": 341, "nt_atom": "///B/113/O2'", "aa_atom": "///O/48/N", "dist": 3.180, "type": "sugar:backbone" } ], "num_baseAA_hbonds": 292, "baseAA_hbonds": [ { "index": 1, "nt_atom": "///a/5/N3", "aa_atom": "///e/101/OG", "dist": 2.475, "type": "base:sidechain" }, { "index": 2, "nt_atom": "///a/5/O4", "aa_atom": "///e/101/OG", "dist": 3.180, "type": "base:sidechain" }, { "index": 3, "nt_atom": "///a/6/N1", "aa_atom": "///e/101/OG", "dist": 3.981, "type": "base:sidechain" }, { "index": 4, "nt_atom": "///a/6/N2", "aa_atom": "///e/104/OG1", "dist": 2.920, "type": "base:sidechain" }, { "index": 5, "nt_atom": "///a/7/N7", "aa_atom": "///e/98/NE2", "dist": 3.028, "type": "base:sidechain" }, { "index": 6, "nt_atom": "///a/8/N6", "aa_atom": "///d/202/O", "dist": 2.826, "type": "base:backbone" }, { "index": 7, "nt_atom": "///a/33/N3", "aa_atom": "///l/29/NE2", "dist": 3.089, "type": "base:sidechain" }, { "index": 8, "nt_atom": "///a/35/N2", "aa_atom": "///l/115/OG", "dist": 3.457, "type": "base:sidechain" }, { "index": 9, "nt_atom": "///a/61/N7", "aa_atom": "///t/6/OG", "dist": 3.037, "type": "base:sidechain" }, { "index": 10, "nt_atom": "///a/101/N7", "aa_atom": "///t/10/NH1", "dist": 2.809, "type": "base:sidechain" }, { "index": 11, "nt_atom": "///a/101/O6", "aa_atom": "///t/10/NH1", "dist": 3.013, "type": "base:sidechain" }, { "index": 12, "nt_atom": "///a/121/N2", "aa_atom": "///q/66/OE2", "dist": 3.848, "type": "base:sidechain" }, { "index": 13, "nt_atom": "///a/129/O2", "aa_atom": "///p/1/N", "dist": 3.156, "type": "base:backbone" }, { "index": 14, "nt_atom": "///a/129/N3", "aa_atom": "///p/1/N", "dist": 3.186, "type": "base:backbone" }, { "index": 15, "nt_atom": "///a/182/O6", "aa_atom": "///t/84/NZ", "dist": 2.606, "type": "base:sidechain" }, { "index": 16, "nt_atom": "///a/254/N7", "aa_atom": "///t/78/NH1", "dist": 3.311, "type": "base:sidechain" }, { "index": 17, "nt_atom": "///a/254/O6", "aa_atom": "///t/78/NH2", "dist": 3.210, "type": "base:sidechain" }, { "index": 18, "nt_atom": "///a/274/N3", "aa_atom": "///q/44/OG", "dist": 3.145, "type": "base:sidechain" }, { "index": 19, "nt_atom": "///a/274/N4", "aa_atom": "///q/44/OG", "dist": 3.184, "type": "base:sidechain" }, { "index": 20, "nt_atom": "///a/399/O4", "aa_atom": "///d/3/N", "dist": 3.422, "type": "base:backbone" }, { "index": 21, "nt_atom": "///a/400/N3", "aa_atom": "///d/116/NE2", "dist": 3.707, "type": "base:sidechain" }, { "index": 22, "nt_atom": "///a/512/O2", "aa_atom": "///l/47/OG", "dist": 3.515, "type": "base:sidechain" }, { "index": 23, "nt_atom": "///a/515/N7", "aa_atom": "///l/50/NH1", "dist": 2.918, "type": "base:sidechain" }, { "index": 24, "nt_atom": "///a/515/O6", "aa_atom": "///l/50/NH2", "dist": 3.263, "type": "base:sidechain" }, { "index": 25, "nt_atom": "///a/516/N4", "aa_atom": "///l/50/NH2", "dist": 3.178, "type": "base:sidechain" }, { "index": 26, "nt_atom": "///a/521/O6", "aa_atom": "///l/46/ND2", "dist": 3.696, "type": "base:sidechain" }, { "index": 27, "nt_atom": "///a/523/O6", "aa_atom": "///l/47/N", "dist": 3.398, "type": "base:backbone" }, { "index": 28, "nt_atom": "///a/523/N1", "aa_atom": "///l/47/O", "dist": 3.159, "type": "base:backbone" }, { "index": 29, "nt_atom": "///a/534/N2", "aa_atom": "///d/40/OE1", "dist": 3.366, "type": "base:sidechain" }, { "index": 30, "nt_atom": "///a/561/O6", "aa_atom": "///l/12/NH2", "dist": 3.562, "type": "base:sidechain" }, { "index": 31, "nt_atom": "///a/580/O2", "aa_atom": "///h/4/NE2", "dist": 2.810, "type": "base:sidechain" }, { "index": 32, "nt_atom": "///a/593/O2", "aa_atom": "///h/107/ND2", "dist": 2.457, "type": "base:sidechain" }, { "index": 33, "nt_atom": "///a/613/N3", "aa_atom": "///d/131/OD1", "dist": 3.013, "type": "base:sidechain" }, { "index": 34, "nt_atom": "///a/651/O2", "aa_atom": "///o/22/OG1", "dist": 3.517, "type": "base:sidechain" }, { "index": 35, "nt_atom": "///a/660/N2", "aa_atom": "///o/52/OG", "dist": 3.107, "type": "base:sidechain" }, { "index": 36, "nt_atom": "///a/669/N3", "aa_atom": "///k/118/N", "dist": 3.487, "type": "base:backbone" }, { "index": 37, "nt_atom": "///a/677/N2", "aa_atom": "///k/39/O", "dist": 2.425, "type": "base:backbone" }, { "index": 38, "nt_atom": "///a/677/N2", "aa_atom": "///k/40/OD1", "dist": 3.181, "type": "base:sidechain" }, { "index": 39, "nt_atom": "///a/678/O2", "aa_atom": "///k/41/N", "dist": 3.307, "type": "base:backbone" }, { "index": 40, "nt_atom": "///a/684/O6", "aa_atom": "///k/53/NH2", "dist": 3.456, "type": "base:sidechain" }, { "index": 41, "nt_atom": "///a/685/O6", "aa_atom": "///k/57/NZ", "dist": 3.687, "type": "base:sidechain" }, { "index": 42, "nt_atom": "///a/710/N3", "aa_atom": "///k/120/N", "dist": 3.760, "type": "base:backbone" }, { "index": 43, "nt_atom": "///a/713/O2", "aa_atom": "///r/39/N", "dist": 3.071, "type": "base:backbone" }, { "index": 44, "nt_atom": "///a/713/O2", "aa_atom": "///r/63/NH2", "dist": 3.507, "type": "base:sidechain" }, { "index": 45, "nt_atom": "///a/713/N3", "aa_atom": "///r/63/NH1", "dist": 3.337, "type": "base:sidechain" }, { "index": 46, "nt_atom": "///a/714/O2", "aa_atom": "///r/60/NZ", "dist": 3.066, "type": "base:sidechain" }, { "index": 47, "nt_atom": "///a/724/O6", "aa_atom": "///o/51/NE2", "dist": 2.852, "type": "base:sidechain" }, { "index": 48, "nt_atom": "///a/820/O2", "aa_atom": "///h/16/ND2", "dist": 3.160, "type": "base:sidechain" }, { "index": 49, "nt_atom": "///a/869/O2", "aa_atom": "///h/16/ND2", "dist": 3.402, "type": "base:sidechain" }, { "index": 50, "nt_atom": "///a/875/N7", "aa_atom": "///l/6/NE2", "dist": 3.386, "type": "base:sidechain" }, { "index": 51, "nt_atom": "///a/876/N4", "aa_atom": "///l/6/OE1", "dist": 3.345, "type": "base:sidechain" }, { "index": 52, "nt_atom": "///a/936/N2", "aa_atom": "///i/126/NE2", "dist": 3.119, "type": "base:sidechain" }, { "index": 53, "nt_atom": "///a/943/N7", "aa_atom": "///m/105/OD1", "dist": 3.032, "type": "base:sidechain" }, { "index": 54, "nt_atom": "///a/944/O4", "aa_atom": "///m/101/NH2", "dist": 3.010, "type": "base:sidechain" }, { "index": 55, "nt_atom": "///a/952/N6", "aa_atom": "///s/77/O", "dist": 2.814, "type": "base:backbone" }, { "index": 56, "nt_atom": "///a/957/N3", "aa_atom": "///j/56/NE2", "dist": 3.955, "type": "base:sidechain" }, { "index": 57, "nt_atom": "///a/969/N6", "aa_atom": "///j/50/OG1", "dist": 2.659, "type": "base:sidechain" }, { "index": 58, "nt_atom": "///a/973/O2", "aa_atom": "///n/59/NH1", "dist": 3.012, "type": "base:sidechain" }, { "index": 59, "nt_atom": "///a/974/O2", "aa_atom": "///n/58/O", "dist": 3.324, "type": "base:backbone" }, { "index": 60, "nt_atom": "///a/1049/N3", "aa_atom": "///c/156/NH2", "dist": 3.480, "type": "base:sidechain" }, { "index": 61, "nt_atom": "///a/1055/N7", "aa_atom": "///c/3/NE2", "dist": 3.341, "type": "base:sidechain" }, { "index": 62, "nt_atom": "///a/1067/O2", "aa_atom": "///b/103/ND2", "dist": 3.450, "type": "base:sidechain" }, { "index": 63, "nt_atom": "///a/1095/N6", "aa_atom": "///b/102/OG1", "dist": 3.808, "type": "base:sidechain" }, { "index": 64, "nt_atom": "///a/1105/N6", "aa_atom": "///c/176/O", "dist": 2.991, "type": "base:backbone" }, { "index": 65, "nt_atom": "///a/1106/O2", "aa_atom": "///c/178/N", "dist": 2.732, "type": "base:backbone" }, { "index": 66, "nt_atom": "///a/1106/O2", "aa_atom": "///c/179/N", "dist": 2.969, "type": "base:backbone" }, { "index": 67, "nt_atom": "///a/1106/N4", "aa_atom": "///c/176/O", "dist": 3.733, "type": "base:backbone" }, { "index": 68, "nt_atom": "///a/1141/O2", "aa_atom": "///i/18/NH2", "dist": 2.311, "type": "base:sidechain" }, { "index": 69, "nt_atom": "///a/1190/N6", "aa_atom": "///c/161/OE1", "dist": 3.327, "type": "base:sidechain" }, { "index": 70, "nt_atom": "///a/1214/N2", "aa_atom": "///s/54/O", "dist": 2.836, "type": "base:backbone" }, { "index": 71, "nt_atom": "///a/1222/N4", "aa_atom": "///m/103/O", "dist": 3.802, "type": "base:backbone" }, { "index": 72, "nt_atom": "///a/1234/N3", "aa_atom": "///g/30/O", "dist": 2.927, "type": "base:backbone" }, { "index": 73, "nt_atom": "///a/1234/O4", "aa_atom": "///g/109/NE", "dist": 3.183, "type": "base:sidechain" }, { "index": 74, "nt_atom": "///a/1234/O4", "aa_atom": "///g/109/NH2", "dist": 2.909, "type": "base:sidechain" }, { "index": 75, "nt_atom": "///a/1275/O4", "aa_atom": "///j/9/NH2", "dist": 3.835, "type": "base:sidechain" }, { "index": 76, "nt_atom": "///a/1291/N2", "aa_atom": "///g/115/OG", "dist": 2.389, "type": "base:sidechain" }, { "index": 77, "nt_atom": "///a/1292/O4", "aa_atom": "///g/115/N", "dist": 3.417, "type": "base:backbone" }, { "index": 78, "nt_atom": "///a/1307/O4", "aa_atom": "///s/2/N", "dist": 3.078, "type": "base:backbone" }, { "index": 79, "nt_atom": "///a/1311/O2", "aa_atom": "///s/37/NH1", "dist": 3.021, "type": "base:sidechain" }, { "index": 80, "nt_atom": "///a/1311/N3", "aa_atom": "///s/37/NH1", "dist": 2.884, "type": "base:sidechain" }, { "index": 81, "nt_atom": "///a/1314/O2", "aa_atom": "///s/36/NH2", "dist": 2.633, "type": "base:sidechain" }, { "index": 82, "nt_atom": "///a/1341/O6", "aa_atom": "///i/12/NH2", "dist": 2.771, "type": "base:sidechain" }, { "index": 83, "nt_atom": "///a/1367/N7", "aa_atom": "///i/13/NZ", "dist": 3.990, "type": "base:sidechain" }, { "index": 84, "nt_atom": "///a/1371/N3", "aa_atom": "///g/3/NH2", "dist": 3.178, "type": "base:sidechain" }, { "index": 85, "nt_atom": "///a/1373/O6", "aa_atom": "///g/3/NE", "dist": 2.576, "type": "base:sidechain" }, { "index": 86, "nt_atom": "///a/1373/O6", "aa_atom": "///g/3/NH2", "dist": 3.146, "type": "base:sidechain" }, { "index": 87, "nt_atom": "///a/1486/N6", "aa_atom": "///l/44/O", "dist": 3.168, "type": "base:backbone" }, { "index": 88, "nt_atom": "///a/1500/O2", "aa_atom": "///k/128/NE", "dist": 3.277, "type": "base:sidechain" }, { "index": 89, "nt_atom": "///a/1522/O4", "aa_atom": "///u/46/NZ", "dist": 2.865, "type": "base:sidechain" }, { "index": 90, "nt_atom": "///a/1524/N7", "aa_atom": "///u/46/NZ", "dist": 3.060, "type": "base:sidechain" }, { "index": 91, "nt_atom": "///a/1524/O6", "aa_atom": "///u/46/NZ", "dist": 3.337, "type": "base:sidechain" }, { "index": 92, "nt_atom": "///A/6/N3", "aa_atom": "///J/135/NE2", "dist": 3.199, "type": "base:sidechain" }, { "index": 93, "nt_atom": "///A/23/N2", "aa_atom": "///S/77/OD1", "dist": 2.831, "type": "base:sidechain" }, { "index": 94, "nt_atom": "///A/24/N2", "aa_atom": "///S/78/OE2", "dist": 2.708, "type": "base:sidechain" }, { "index": 95, "nt_atom": "///A/38/N3", "aa_atom": "///E/42/OG", "dist": 2.531, "type": "base:sidechain" }, { "index": 96, "nt_atom": "///A/72/N6", "aa_atom": "///Y/58/ND2", "dist": 2.997, "type": "base:sidechain" }, { "index": 97, "nt_atom": "///A/85/N7", "aa_atom": "///U/6/NH2", "dist": 3.291, "type": "base:sidechain" }, { "index": 98, "nt_atom": "///A/100/O4", "aa_atom": "///U/5/NH2", "dist": 3.516, "type": "base:sidechain" }, { "index": 99, "nt_atom": "///A/126/N1", "aa_atom": "///4/43/OG1", "dist": 3.748, "type": "base:sidechain" }, { "index": 100, "nt_atom": "///A/205/O6", "aa_atom": "///X/26/NH1", "dist": 3.204, "type": "base:sidechain" }, { "index": 101, "nt_atom": "///A/242/N7", "aa_atom": "///5/2/O", "dist": 3.388, "type": "base:backbone" }, { "index": 102, "nt_atom": "///A/246/O4", "aa_atom": "///5/8/OG", "dist": 3.083, "type": "base:sidechain" }, { "index": 103, "nt_atom": "///A/247/O6", "aa_atom": "///5/12/NZ", "dist": 2.607, "type": "base:sidechain" }, { "index": 104, "nt_atom": "///A/249/O2", "aa_atom": "///5/12/NZ", "dist": 2.743, "type": "base:sidechain" }, { "index": 105, "nt_atom": "///A/314/N3", "aa_atom": "///E/162/ND2", "dist": 2.600, "type": "base:sidechain" }, { "index": 106, "nt_atom": "///A/317/N2", "aa_atom": "///E/162/ND2", "dist": 3.400, "type": "base:sidechain" }, { "index": 107, "nt_atom": "///A/321/N2", "aa_atom": "///U/67/OG", "dist": 3.024, "type": "base:sidechain" }, { "index": 108, "nt_atom": "///A/362/N3", "aa_atom": "///X/61/NZ", "dist": 3.275, "type": "base:sidechain" }, { "index": 109, "nt_atom": "///A/391/N7", "aa_atom": "///X/57/NH1", "dist": 3.085, "type": "base:sidechain" }, { "index": 110, "nt_atom": "///A/434/N6", "aa_atom": "///E/35/O", "dist": 3.122, "type": "base:backbone" }, { "index": 111, "nt_atom": "///A/455/O2", "aa_atom": "///4/16/NE2", "dist": 3.755, "type": "base:sidechain" }, { "index": 112, "nt_atom": "///A/458/N7", "aa_atom": "///4/34/NH1", "dist": 3.244, "type": "base:sidechain" }, { "index": 113, "nt_atom": "///A/459/N7", "aa_atom": "///4/39/NH2", "dist": 2.817, "type": "base:sidechain" }, { "index": 114, "nt_atom": "///A/460/N7", "aa_atom": "///4/37/NZ", "dist": 3.478, "type": "base:sidechain" }, { "index": 115, "nt_atom": "///A/478/O2", "aa_atom": "///S/53/OG", "dist": 3.502, "type": "base:sidechain" }, { "index": 116, "nt_atom": "///A/480/N7", "aa_atom": "///S/49/NZ", "dist": 3.874, "type": "base:sidechain" }, { "index": 117, "nt_atom": "///A/482/O6", "aa_atom": "///S/49/NZ", "dist": 3.637, "type": "base:sidechain" }, { "index": 118, "nt_atom": "///A/485/N2", "aa_atom": "///S/57/OD1", "dist": 3.766, "type": "base:sidechain" }, { "index": 119, "nt_atom": "///A/519/N7", "aa_atom": "///J/116/NH1", "dist": 3.222, "type": "base:sidechain" }, { "index": 120, "nt_atom": "///A/523/N3", "aa_atom": "///Q/28/NH2", "dist": 3.765, "type": "base:sidechain" }, { "index": 121, "nt_atom": "///A/539/N3", "aa_atom": "///R/19/O", "dist": 3.880, "type": "base:backbone" }, { "index": 122, "nt_atom": "///A/539/O4", "aa_atom": "///R/19/N", "dist": 2.887, "type": "base:backbone" }, { "index": 123, "nt_atom": "///A/549/N2", "aa_atom": "///Q/52/OE1", "dist": 3.628, "type": "base:sidechain" }, { "index": 124, "nt_atom": "///A/549/N3", "aa_atom": "///Q/56/NE2", "dist": 3.066, "type": "base:sidechain" }, { "index": 125, "nt_atom": "///A/550/O2", "aa_atom": "///Q/48/NH1", "dist": 3.304, "type": "base:sidechain" }, { "index": 126, "nt_atom": "///A/558/O4", "aa_atom": "///R/81/NZ", "dist": 3.883, "type": "base:sidechain" }, { "index": 127, "nt_atom": "///A/575/N7", "aa_atom": "///Q/6/NH1", "dist": 2.406, "type": "base:sidechain" }, { "index": 128, "nt_atom": "///A/577/O2", "aa_atom": "///L/33/NH2", "dist": 2.923, "type": "base:sidechain" }, { "index": 129, "nt_atom": "///A/577/N3", "aa_atom": "///L/33/NE", "dist": 3.784, "type": "base:sidechain" }, { "index": 130, "nt_atom": "///A/583/O2", "aa_atom": "///5/64/O", "dist": 3.227, "type": "base:backbone" }, { "index": 131, "nt_atom": "///A/587/N2", "aa_atom": "///L/12/O", "dist": 3.643, "type": "base:backbone" }, { "index": 132, "nt_atom": "///A/605/N3", "aa_atom": "///E/34/O", "dist": 3.077, "type": "base:backbone" }, { "index": 133, "nt_atom": "///A/609/O6", "aa_atom": "///E/97/NZ", "dist": 3.746, "type": "base:sidechain" }, { "index": 134, "nt_atom": "///A/610/O4", "aa_atom": "///E/97/NZ", "dist": 3.020, "type": "base:sidechain" }, { "index": 135, "nt_atom": "///A/616/O2", "aa_atom": "///L/81/OE2", "dist": 2.896, "type": "base:sidechain" }, { "index": 136, "nt_atom": "///A/617/N7", "aa_atom": "///L/113/OG", "dist": 3.227, "type": "base:sidechain" }, { "index": 137, "nt_atom": "///A/617/N6", "aa_atom": "///L/112/O", "dist": 3.293, "type": "base:backbone" }, { "index": 138, "nt_atom": "///A/624/N7", "aa_atom": "///L/74/NH2", "dist": 3.373, "type": "base:sidechain" }, { "index": 139, "nt_atom": "///A/624/O6", "aa_atom": "///L/74/NH1", "dist": 3.798, "type": "base:sidechain" }, { "index": 140, "nt_atom": "///A/648/O2", "aa_atom": "///E/96/ND2", "dist": 3.392, "type": "base:sidechain" }, { "index": 141, "nt_atom": "///A/649/N2", "aa_atom": "///E/29/OE1", "dist": 2.966, "type": "base:sidechain" }, { "index": 142, "nt_atom": "///A/654/N2", "aa_atom": "///5/64/O", "dist": 2.390, "type": "base:backbone" }, { "index": 143, "nt_atom": "///A/657/O2", "aa_atom": "///5/3/NZ", "dist": 3.520, "type": "base:sidechain" }, { "index": 144, "nt_atom": "///A/661/N4", "aa_atom": "///L/40/O", "dist": 2.991, "type": "base:backbone" }, { "index": 145, "nt_atom": "///A/676/O2", "aa_atom": "///4/6/O", "dist": 2.868, "type": "base:backbone" }, { "index": 146, "nt_atom": "///A/676/O4", "aa_atom": "///4/12/NH2", "dist": 3.244, "type": "base:sidechain" }, { "index": 147, "nt_atom": "///A/680/O2", "aa_atom": "///C/43/NH2", "dist": 3.729, "type": "base:sidechain" }, { "index": 148, "nt_atom": "///A/719/N7", "aa_atom": "///C/209/N", "dist": 3.050, "type": "base:backbone" }, { "index": 149, "nt_atom": "///A/719/O6", "aa_atom": "///C/208/N", "dist": 2.949, "type": "base:backbone" }, { "index": 150, "nt_atom": "///A/754/N3", "aa_atom": "///C/212/NH1", "dist": 3.257, "type": "base:sidechain" }, { "index": 151, "nt_atom": "///A/797/O2", "aa_atom": "///E/68/NH2", "dist": 3.341, "type": "base:sidechain" }, { "index": 152, "nt_atom": "///A/804/N4", "aa_atom": "///L/24/O", "dist": 2.937, "type": "base:backbone" }, { "index": 153, "nt_atom": "///A/821/N2", "aa_atom": "///L/52/O", "dist": 3.094, "type": "base:backbone" }, { "index": 154, "nt_atom": "///A/823/N3", "aa_atom": "///L/51/OE2", "dist": 2.947, "type": "base:sidechain" }, { "index": 155, "nt_atom": "///A/857/O2", "aa_atom": "///M/8/NZ", "dist": 3.437, "type": "base:sidechain" }, { "index": 156, "nt_atom": "///A/900/N6", "aa_atom": "///M/11/O", "dist": 2.633, "type": "base:backbone" }, { "index": 157, "nt_atom": "///A/917/N2", "aa_atom": "///Z/25/O", "dist": 3.662, "type": "base:backbone" }, { "index": 158, "nt_atom": "///A/948/O2", "aa_atom": "///M/16/ND1", "dist": 3.526, "type": "base:sidechain" }, { "index": 159, "nt_atom": "///A/984/O2", "aa_atom": "///R/10/NZ", "dist": 3.454, "type": "base:sidechain" }, { "index": 160, "nt_atom": "///A/985/N3", "aa_atom": "///J/3/N", "dist": 3.547, "type": "base:backbone" }, { "index": 161, "nt_atom": "///A/1002/O2", "aa_atom": "///J/27/NH1", "dist": 3.356, "type": "base:sidechain" }, { "index": 162, "nt_atom": "///A/1012/O6", "aa_atom": "///J/68/NZ", "dist": 2.389, "type": "base:sidechain" }, { "index": 163, "nt_atom": "///A/1021/N3", "aa_atom": "///6/38/OXT", "dist": 3.012, "type": "base:sidechain" }, { "index": 164, "nt_atom": "///A/1048/N2", "aa_atom": "///I/128/OG1", "dist": 3.541, "type": "base:sidechain" }, { "index": 165, "nt_atom": "///A/1049/N2", "aa_atom": "///I/128/O", "dist": 3.005, "type": "base:backbone" }, { "index": 166, "nt_atom": "///A/1050/O4", "aa_atom": "///I/132/OG", "dist": 2.931, "type": "base:sidechain" }, { "index": 167, "nt_atom": "///A/1053/N2", "aa_atom": "///I/91/O", "dist": 2.599, "type": "base:backbone" }, { "index": 168, "nt_atom": "///A/1061/N7", "aa_atom": "///I/10/NZ", "dist": 2.435, "type": "base:sidechain" }, { "index": 169, "nt_atom": "///A/1065/O2", "aa_atom": "///I/91/O", "dist": 2.806, "type": "base:backbone" }, { "index": 170, "nt_atom": "///A/1069/N3", "aa_atom": "///I/131/O", "dist": 2.983, "type": "base:backbone" }, { "index": 171, "nt_atom": "///A/1078/N6", "aa_atom": "///I/134/O", "dist": 2.877, "type": "base:backbone" }, { "index": 172, "nt_atom": "///A/1078/N6", "aa_atom": "///I/135/OG", "dist": 2.548, "type": "base:sidechain" }, { "index": 173, "nt_atom": "///A/1087/O2", "aa_atom": "///I/30/N", "dist": 3.514, "type": "base:backbone" }, { "index": 174, "nt_atom": "///A/1087/O2", "aa_atom": "///I/31/ND1", "dist": 3.137, "type": "base:sidechain" }, { "index": 175, "nt_atom": "///A/1088/N3", "aa_atom": "///I/4/NZ", "dist": 2.947, "type": "base:sidechain" }, { "index": 176, "nt_atom": "///A/1090/N4", "aa_atom": "///I/6/OE1", "dist": 2.880, "type": "base:sidechain" }, { "index": 177, "nt_atom": "///A/1114/N2", "aa_atom": "///6/5/O", "dist": 2.877, "type": "base:backbone" }, { "index": 178, "nt_atom": "///A/1120/O2", "aa_atom": "///D/154/NE", "dist": 3.975, "type": "base:sidechain" }, { "index": 179, "nt_atom": "///A/1127/N2", "aa_atom": "///J/107/O", "dist": 3.471, "type": "base:backbone" }, { "index": 180, "nt_atom": "///A/1131/O2", "aa_atom": "///J/68/NZ", "dist": 3.749, "type": "base:sidechain" }, { "index": 181, "nt_atom": "///A/1134/N6", "aa_atom": "///J/26/O", "dist": 3.134, "type": "base:backbone" }, { "index": 182, "nt_atom": "///A/1153/N2", "aa_atom": "///R/91/OE1", "dist": 3.178, "type": "base:sidechain" }, { "index": 183, "nt_atom": "///A/1189/N2", "aa_atom": "///L/3/O", "dist": 3.313, "type": "base:backbone" }, { "index": 184, "nt_atom": "///A/1229/O2", "aa_atom": "///L/4/ND2", "dist": 2.491, "type": "base:sidechain" }, { "index": 185, "nt_atom": "///A/1230/O2", "aa_atom": "///L/4/OD1", "dist": 3.301, "type": "base:sidechain" }, { "index": 186, "nt_atom": "///A/1237/N7", "aa_atom": "///L/18/NH2", "dist": 2.728, "type": "base:sidechain" }, { "index": 187, "nt_atom": "///A/1237/O6", "aa_atom": "///L/18/NH2", "dist": 2.629, "type": "base:sidechain" }, { "index": 188, "nt_atom": "///A/1239/N2", "aa_atom": "///Q/33/O", "dist": 3.044, "type": "base:backbone" }, { "index": 189, "nt_atom": "///A/1239/N3", "aa_atom": "///Q/33/NE", "dist": 3.603, "type": "base:sidechain" }, { "index": 190, "nt_atom": "///A/1243/N2", "aa_atom": "///E/76/O", "dist": 2.955, "type": "base:backbone" }, { "index": 191, "nt_atom": "///A/1249/N3", "aa_atom": "///2/7/NZ", "dist": 3.666, "type": "base:sidechain" }, { "index": 192, "nt_atom": "///A/1250/O2", "aa_atom": "///2/4/NE2", "dist": 3.037, "type": "base:sidechain" }, { "index": 193, "nt_atom": "///A/1253/O6", "aa_atom": "///S/13/OG", "dist": 3.012, "type": "base:sidechain" }, { "index": 194, "nt_atom": "///A/1281/N3", "aa_atom": "///N/23/ND2", "dist": 3.058, "type": "base:sidechain" }, { "index": 195, "nt_atom": "///A/1325/N7", "aa_atom": "///T/65/NZ", "dist": 3.479, "type": "base:sidechain" }, { "index": 196, "nt_atom": "///A/1328/O2", "aa_atom": "///T/58/OG1", "dist": 3.139, "type": "base:sidechain" }, { "index": 197, "nt_atom": "///A/1351/N7", "aa_atom": "///X/2/N", "dist": 2.858, "type": "base:backbone" }, { "index": 198, "nt_atom": "///A/1379/N1", "aa_atom": "///T/17/OE1", "dist": 2.955, "type": "base:sidechain" }, { "index": 199, "nt_atom": "///A/1381/O2", "aa_atom": "///T/18/NZ", "dist": 3.745, "type": "base:sidechain" }, { "index": 200, "nt_atom": "///A/1441/O2", "aa_atom": "///N/63/NE", "dist": 3.414, "type": "base:sidechain" }, { "index": 201, "nt_atom": "///A/1441/O4", "aa_atom": "///N/64/NE", "dist": 3.649, "type": "base:sidechain" }, { "index": 202, "nt_atom": "///A/1604/N6", "aa_atom": "///S/88/O", "dist": 3.569, "type": "base:backbone" }, { "index": 203, "nt_atom": "///A/1609/N2", "aa_atom": "///4/1/O", "dist": 3.468, "type": "base:backbone" }, { "index": 204, "nt_atom": "///A/1642/N6", "aa_atom": "///N/11/OG", "dist": 3.800, "type": "base:sidechain" }, { "index": 205, "nt_atom": "///A/1643/O6", "aa_atom": "///N/11/N", "dist": 2.867, "type": "base:backbone" }, { "index": 206, "nt_atom": "///A/1643/O6", "aa_atom": "///N/11/OG", "dist": 2.776, "type": "base:sidechain" }, { "index": 207, "nt_atom": "///A/1660/O2", "aa_atom": "///D/134/NE2", "dist": 2.677, "type": "base:sidechain" }, { "index": 208, "nt_atom": "///A/1665/N3", "aa_atom": "///D/133/OG1", "dist": 3.090, "type": "base:sidechain" }, { "index": 209, "nt_atom": "///A/1685/N7", "aa_atom": "///C/14/NH2", "dist": 3.853, "type": "base:sidechain" }, { "index": 210, "nt_atom": "///A/1760/N6", "aa_atom": "///C/11/O", "dist": 3.651, "type": "base:backbone" }, { "index": 211, "nt_atom": "///A/1786/O6", "aa_atom": "///C/178/N", "dist": 3.257, "type": "base:backbone" }, { "index": 212, "nt_atom": "///A/1793/O2", "aa_atom": "///C/44/ND2", "dist": 3.385, "type": "base:sidechain" }, { "index": 213, "nt_atom": "///A/1799/O2", "aa_atom": "///C/44/ND2", "dist": 3.643, "type": "base:sidechain" }, { "index": 214, "nt_atom": "///A/1800/N2", "aa_atom": "///C/51/OG1", "dist": 3.315, "type": "base:sidechain" }, { "index": 215, "nt_atom": "///A/1800/N3", "aa_atom": "///C/50/OG1", "dist": 3.271, "type": "base:sidechain" }, { "index": 216, "nt_atom": "///A/1803/N4", "aa_atom": "///C/35/OE2", "dist": 3.338, "type": "base:sidechain" }, { "index": 217, "nt_atom": "///A/1805/O4", "aa_atom": "///C/153/OE1", "dist": 2.935, "type": "base:sidechain" }, { "index": 218, "nt_atom": "///A/1807/O2", "aa_atom": "///C/200/N", "dist": 3.973, "type": "base:backbone" }, { "index": 219, "nt_atom": "///A/1815/O6", "aa_atom": "///C/221/NH1", "dist": 3.992, "type": "base:sidechain" }, { "index": 220, "nt_atom": "///A/1828/O2", "aa_atom": "///C/244/NE2", "dist": 3.462, "type": "base:sidechain" }, { "index": 221, "nt_atom": "///A/1983/N4", "aa_atom": "///K/32/OH", "dist": 2.657, "type": "base:sidechain" }, { "index": 222, "nt_atom": "///A/1999/N7", "aa_atom": "///S/16/NZ", "dist": 2.602, "type": "base:sidechain" }, { "index": 223, "nt_atom": "///A/2006/N7", "aa_atom": "///2/6/ND2", "dist": 3.545, "type": "base:sidechain" }, { "index": 224, "nt_atom": "///A/2006/N6", "aa_atom": "///2/6/OD1", "dist": 3.774, "type": "base:sidechain" }, { "index": 225, "nt_atom": "///A/2007/N6", "aa_atom": "///2/6/OD1", "dist": 3.293, "type": "base:sidechain" }, { "index": 226, "nt_atom": "///A/2032/O2", "aa_atom": "///2/19/NE2", "dist": 3.163, "type": "base:sidechain" }, { "index": 227, "nt_atom": "///A/2039/N3", "aa_atom": "///D/153/O", "dist": 3.190, "type": "base:backbone" }, { "index": 228, "nt_atom": "///A/2077/N3", "aa_atom": "///X/32/ND2", "dist": 3.109, "type": "base:sidechain" }, { "index": 229, "nt_atom": "///A/2216/O2", "aa_atom": "///X/34/NE2", "dist": 3.052, "type": "base:sidechain" }, { "index": 230, "nt_atom": "///A/2249/O4", "aa_atom": "///W/14/O", "dist": 3.182, "type": "base:backbone" }, { "index": 231, "nt_atom": "///A/2251/N4", "aa_atom": "///W/15/OD2", "dist": 3.162, "type": "base:sidechain" }, { "index": 232, "nt_atom": "///A/2265/N6", "aa_atom": "///W/14/O", "dist": 3.882, "type": "base:backbone" }, { "index": 233, "nt_atom": "///A/2266/O6", "aa_atom": "///W/14/NE", "dist": 3.339, "type": "base:sidechain" }, { "index": 234, "nt_atom": "///A/2273/O6", "aa_atom": "///3/19/OG1", "dist": 3.271, "type": "base:sidechain" }, { "index": 235, "nt_atom": "///A/2292/O4", "aa_atom": "///F/39/N", "dist": 3.451, "type": "base:backbone" }, { "index": 236, "nt_atom": "///A/2293/N4", "aa_atom": "///F/39/O", "dist": 3.458, "type": "base:backbone" }, { "index": 237, "nt_atom": "///A/2317/N3", "aa_atom": "///W/41/O", "dist": 3.342, "type": "base:backbone" }, { "index": 238, "nt_atom": "///A/2323/N6", "aa_atom": "///W/43/OG1", "dist": 3.963, "type": "base:sidechain" }, { "index": 239, "nt_atom": "///A/2338/N7", "aa_atom": "///5/42/NE2", "dist": 3.946, "type": "base:sidechain" }, { "index": 240, "nt_atom": "///A/2338/O6", "aa_atom": "///5/41/NH1", "dist": 2.971, "type": "base:sidechain" }, { "index": 241, "nt_atom": "///A/2340/N2", "aa_atom": "///W/34/O", "dist": 2.521, "type": "base:backbone" }, { "index": 242, "nt_atom": "///A/2345/N1", "aa_atom": "///L/54/OE1", "dist": 3.243, "type": "base:sidechain" }, { "index": 243, "nt_atom": "///A/2350/O2", "aa_atom": "///W/39/NH1", "dist": 2.838, "type": "base:sidechain" }, { "index": 244, "nt_atom": "///A/2352/O6", "aa_atom": "///5/42/NE2", "dist": 3.056, "type": "base:sidechain" }, { "index": 245, "nt_atom": "///A/2363/N3", "aa_atom": "///O/110/NH2", "dist": 3.368, "type": "base:sidechain" }, { "index": 246, "nt_atom": "///A/2369/N2", "aa_atom": "///5/41/NH2", "dist": 3.023, "type": "base:sidechain" }, { "index": 247, "nt_atom": "///A/2415/N2", "aa_atom": "///L/54/NE2", "dist": 3.001, "type": "base:sidechain" }, { "index": 248, "nt_atom": "///A/2415/N2", "aa_atom": "///L/60/NH1", "dist": 3.012, "type": "base:sidechain" }, { "index": 249, "nt_atom": "///A/2416/N7", "aa_atom": "///L/55/NE2", "dist": 3.782, "type": "base:sidechain" }, { "index": 250, "nt_atom": "///A/2419/N6", "aa_atom": "///X/21/O", "dist": 3.750, "type": "base:backbone" }, { "index": 251, "nt_atom": "///A/2470/O2", "aa_atom": "///M/124/NZ", "dist": 2.462, "type": "base:sidechain" }, { "index": 252, "nt_atom": "///A/2471/N2", "aa_atom": "///M/123/O", "dist": 3.590, "type": "base:backbone" }, { "index": 253, "nt_atom": "///A/2498/O2", "aa_atom": "///D/145/N", "dist": 3.171, "type": "base:backbone" }, { "index": 254, "nt_atom": "///A/2499/O2", "aa_atom": "///D/145/OG", "dist": 3.001, "type": "base:sidechain" }, { "index": 255, "nt_atom": "///A/2500/N3", "aa_atom": "///D/148/NE2", "dist": 3.171, "type": "base:sidechain" }, { "index": 256, "nt_atom": "///A/2516/O6", "aa_atom": "///6/32/NH2", "dist": 2.788, "type": "base:sidechain" }, { "index": 257, "nt_atom": "///A/2517/N7", "aa_atom": "///G/172/NZ", "dist": 2.580, "type": "base:sidechain" }, { "index": 258, "nt_atom": "///A/2552/N6", "aa_atom": "///K/28/OG", "dist": 3.243, "type": "base:sidechain" }, { "index": 259, "nt_atom": "///A/2553/N6", "aa_atom": "///K/28/O", "dist": 3.831, "type": "base:backbone" }, { "index": 260, "nt_atom": "///A/2559/N6", "aa_atom": "///D/150/NE2", "dist": 3.373, "type": "base:sidechain" }, { "index": 261, "nt_atom": "///A/2561/N2", "aa_atom": "///D/145/OG", "dist": 3.195, "type": "base:sidechain" }, { "index": 262, "nt_atom": "///A/2562/O2", "aa_atom": "///D/145/OG", "dist": 3.589, "type": "base:sidechain" }, { "index": 263, "nt_atom": "///A/2620/N3", "aa_atom": "///D/65/NE2", "dist": 3.404, "type": "base:sidechain" }, { "index": 264, "nt_atom": "///A/2653/N4", "aa_atom": "///G/108/O", "dist": 2.791, "type": "base:backbone" }, { "index": 265, "nt_atom": "///A/2654/O2", "aa_atom": "///G/110/N", "dist": 3.324, "type": "base:backbone" }, { "index": 266, "nt_atom": "///A/2654/O2", "aa_atom": "///G/111/ND1", "dist": 3.925, "type": "base:sidechain" }, { "index": 267, "nt_atom": "///A/2670/O2", "aa_atom": "///K/70/NH2", "dist": 2.450, "type": "base:sidechain" }, { "index": 268, "nt_atom": "///A/2677/N3", "aa_atom": "///N/6/O", "dist": 3.342, "type": "base:backbone" }, { "index": 269, "nt_atom": "///A/2692/N3", "aa_atom": "///N/64/NH2", "dist": 3.605, "type": "base:sidechain" }, { "index": 270, "nt_atom": "///A/2708/N1", "aa_atom": "///N/5/NZ", "dist": 3.835, "type": "base:sidechain" }, { "index": 271, "nt_atom": "///A/2720/N1", "aa_atom": "///D/208/O", "dist": 2.980, "type": "base:backbone" }, { "index": 272, "nt_atom": "///A/2731/N2", "aa_atom": "///G/143/OE1", "dist": 2.686, "type": "base:sidechain" }, { "index": 273, "nt_atom": "///A/2732/O2", "aa_atom": "///G/139/NE2", "dist": 3.000, "type": "base:sidechain" }, { "index": 274, "nt_atom": "///A/2744/N1", "aa_atom": "///G/67/OG1", "dist": 2.922, "type": "base:sidechain" }, { "index": 275, "nt_atom": "///A/2767/N1", "aa_atom": "///J/102/OE1", "dist": 3.991, "type": "base:sidechain" }, { "index": 276, "nt_atom": "///A/2767/N2", "aa_atom": "///J/102/OE2", "dist": 3.716, "type": "base:sidechain" }, { "index": 277, "nt_atom": "///A/2807/N6", "aa_atom": "///D/197/OG1", "dist": 3.293, "type": "base:sidechain" }, { "index": 278, "nt_atom": "///A/2807/N1", "aa_atom": "///N/4/NH1", "dist": 2.887, "type": "base:sidechain" }, { "index": 279, "nt_atom": "///A/2818/N7", "aa_atom": "///D/60/NH1", "dist": 3.215, "type": "base:sidechain" }, { "index": 280, "nt_atom": "///A/2825/N3", "aa_atom": "///N/45/NH2", "dist": 3.217, "type": "base:sidechain" }, { "index": 281, "nt_atom": "///A/2826/N2", "aa_atom": "///N/91/O", "dist": 3.083, "type": "base:backbone" }, { "index": 282, "nt_atom": "///A/2860/N3", "aa_atom": "///N/6/N", "dist": 3.326, "type": "base:backbone" }, { "index": 283, "nt_atom": "///A/2868/O2", "aa_atom": "///N/45/NH2", "dist": 3.501, "type": "base:sidechain" }, { "index": 284, "nt_atom": "///A/2871/O4", "aa_atom": "///2/37/NE2", "dist": 3.964, "type": "base:sidechain" }, { "index": 285, "nt_atom": "///A/2871/O4", "aa_atom": "///2/40/N", "dist": 3.310, "type": "base:backbone" }, { "index": 286, "nt_atom": "///B/37/O2", "aa_atom": "///O/99/NE2", "dist": 3.185, "type": "base:sidechain" }, { "index": 287, "nt_atom": "///B/43/O2", "aa_atom": "///F/92/NE", "dist": 3.834, "type": "base:sidechain" }, { "index": 288, "nt_atom": "///B/52/N6", "aa_atom": "///O/33/O", "dist": 3.708, "type": "base:backbone" }, { "index": 289, "nt_atom": "///B/75/N2", "aa_atom": "///V/91/NE2", "dist": 3.063, "type": "base:sidechain" }, { "index": 290, "nt_atom": "///B/79/O6", "aa_atom": "///V/16/NZ", "dist": 2.661, "type": "base:sidechain" }, { "index": 291, "nt_atom": "///B/82/O2", "aa_atom": "///Z/51/OH", "dist": 3.637, "type": "base:sidechain" }, { "index": 292, "nt_atom": "///B/98/O6", "aa_atom": "///V/16/N", "dist": 3.052, "type": "base:backbone" } ], "num_ntAA_pairs": 77, "ntAA_pairs": [ { "index": 1, "ntaa": "A-gln", "nt": "///a/33", "aa": "///l/29", "vertical_dist": 0.326, "plane_angle": 24.997 }, { "index": 2, "ntaa": "G-arg", "nt": "///a/101", "aa": "///t/10", "vertical_dist": 0.636, "plane_angle": 29.160 }, { "index": 3, "ntaa": "G-glu", "nt": "///a/121", "aa": "///q/66", "vertical_dist": 1.086, "plane_angle": 27.745 }, { "index": 4, "ntaa": "G-arg", "nt": "///a/254", "aa": "///t/78", "vertical_dist": 0.254, "plane_angle": 6.644 }, { "index": 5, "ntaa": "G-arg", "nt": "///a/515", "aa": "///l/50", "vertical_dist": 0.278, "plane_angle": 62.424 }, { "index": 6, "ntaa": "U-gln", "nt": "///a/580", "aa": "///h/4", "vertical_dist": 1.132, "plane_angle": 9.814 }, { "index": 7, "ntaa": "U-asn", "nt": "///a/613", "aa": "///d/131", "vertical_dist": 0.604, "plane_angle": 49.758 }, { "index": 8, "ntaa": "G-asn", "nt": "///a/677", "aa": "///k/40", "vertical_dist": 0.873, "plane_angle": 51.816 }, { "index": 9, "ntaa": "G-arg", "nt": "///a/684", "aa": "///k/53", "vertical_dist": 1.662, "plane_angle": 1.525 }, { "index": 10, "ntaa": "C-arg", "nt": "///a/713", "aa": "///r/63", "vertical_dist": 0.033, "plane_angle": 14.631 }, { "index": 11, "ntaa": "G-his", "nt": "///a/724", "aa": "///o/51", "vertical_dist": 0.372, "plane_angle": 29.603 }, { "index": 12, "ntaa": "U-asn", "nt": "///a/869", "aa": "///h/16", "vertical_dist": 0.256, "plane_angle": 37.575 }, { "index": 13, "ntaa": "G-gln", "nt": "///a/936", "aa": "///i/126", "vertical_dist": 2.309, "plane_angle": 55.154 }, { "index": 14, "ntaa": "C-arg", "nt": "///a/973", "aa": "///n/59", "vertical_dist": 1.012, "plane_angle": 53.789 }, { "index": 15, "ntaa": "G-gln", "nt": "///a/1055", "aa": "///c/3", "vertical_dist": 1.670, "plane_angle": 62.186 }, { "index": 16, "ntaa": "U-asn", "nt": "///a/1067", "aa": "///b/103", "vertical_dist": 0.563, "plane_angle": 60.277 }, { "index": 17, "ntaa": "U-arg", "nt": "///a/1275", "aa": "///j/9", "vertical_dist": 0.023, "plane_angle": 17.973 }, { "index": 18, "ntaa": "G-arg", "nt": "///a/1341", "aa": "///i/12", "vertical_dist": 0.186, "plane_angle": 40.373 }, { "index": 19, "ntaa": "A-arg", "nt": "///a/1371", "aa": "///g/3", "vertical_dist": 2.091, "plane_angle": 46.339 }, { "index": 20, "ntaa": "U-arg", "nt": "///a/1500", "aa": "///k/128", "vertical_dist": 1.286, "plane_angle": 14.115 }, { "index": 21, "ntaa": "A-gln", "nt": "///A/6", "aa": "///J/135", "vertical_dist": 0.176, "plane_angle": 21.584 }, { "index": 22, "ntaa": "G-asn", "nt": "///A/23", "aa": "///S/77", "vertical_dist": 1.577, "plane_angle": 52.439 }, { "index": 23, "ntaa": "G-glu", "nt": "///A/24", "aa": "///S/78", "vertical_dist": 1.325, "plane_angle": 23.309 }, { "index": 24, "ntaa": "A-asn", "nt": "///A/72", "aa": "///Y/58", "vertical_dist": 1.119, "plane_angle": 21.391 }, { "index": 25, "ntaa": "U-arg", "nt": "///A/100", "aa": "///U/5", "vertical_dist": 1.662, "plane_angle": 40.942 }, { "index": 26, "ntaa": "G-arg", "nt": "///A/205", "aa": "///X/26", "vertical_dist": 2.151, "plane_angle": 38.163 }, { "index": 27, "ntaa": "G-arg", "nt": "///A/391", "aa": "///X/57", "vertical_dist": 0.834, "plane_angle": 24.222 }, { "index": 28, "ntaa": "G-arg", "nt": "///A/458", "aa": "///4/34", "vertical_dist": 0.090, "plane_angle": 8.747 }, { "index": 29, "ntaa": "G-arg", "nt": "///A/459", "aa": "///4/39", "vertical_dist": 0.364, "plane_angle": 15.277 }, { "index": 30, "ntaa": "G-asn", "nt": "///A/485", "aa": "///S/57", "vertical_dist": 0.108, "plane_angle": 31.737 }, { "index": 31, "ntaa": "A-arg", "nt": "///A/519", "aa": "///J/116", "vertical_dist": 0.501, "plane_angle": 12.168 }, { "index": 32, "ntaa": "A-arg", "nt": "///A/523", "aa": "///Q/28", "vertical_dist": 1.348, "plane_angle": 50.662 }, { "index": 33, "ntaa": "G-arg", "nt": "///A/575", "aa": "///Q/6", "vertical_dist": 0.220, "plane_angle": 30.860 }, { "index": 34, "ntaa": "C-arg", "nt": "///A/577", "aa": "///L/33", "vertical_dist": 0.310, "plane_angle": 21.907 }, { "index": 35, "ntaa": "U-glu", "nt": "///A/616", "aa": "///L/81", "vertical_dist": 1.268, "plane_angle": 30.034 }, { "index": 36, "ntaa": "G-arg", "nt": "///A/624", "aa": "///L/74", "vertical_dist": 1.629, "plane_angle": 45.536 }, { "index": 37, "ntaa": "C-asn", "nt": "///A/648", "aa": "///E/96", "vertical_dist": 1.246, "plane_angle": 31.246 }, { "index": 38, "ntaa": "G-gln", "nt": "///A/649", "aa": "///E/29", "vertical_dist": 0.123, "plane_angle": 48.554 }, { "index": 39, "ntaa": "U-arg", "nt": "///A/676", "aa": "///4/12", "vertical_dist": 1.549, "plane_angle": 37.945 }, { "index": 40, "ntaa": "U-his", "nt": "///A/948", "aa": "///M/16", "vertical_dist": 0.637, "plane_angle": 52.676 }, { "index": 41, "ntaa": "U-arg", "nt": "///A/1002", "aa": "///J/27", "vertical_dist": 2.242, "plane_angle": 41.968 }, { "index": 42, "ntaa": "U-his", "nt": "///A/1087", "aa": "///I/31", "vertical_dist": 0.623, "plane_angle": 7.713 }, { "index": 43, "ntaa": "C-gln", "nt": "///A/1090", "aa": "///I/6", "vertical_dist": 0.162, "plane_angle": 47.833 }, { "index": 44, "ntaa": "U-arg", "nt": "///A/1120", "aa": "///D/154", "vertical_dist": 1.080, "plane_angle": 29.967 }, { "index": 45, "ntaa": "G-gln", "nt": "///A/1153", "aa": "///R/91", "vertical_dist": 1.290, "plane_angle": 32.339 }, { "index": 46, "ntaa": "G-arg", "nt": "///A/1237", "aa": "///L/18", "vertical_dist": 0.572, "plane_angle": 25.797 }, { "index": 47, "ntaa": "U-gln", "nt": "///A/1250", "aa": "///2/4", "vertical_dist": 0.277, "plane_angle": 30.801 }, { "index": 48, "ntaa": "A-asn", "nt": "///A/1281", "aa": "///N/23", "vertical_dist": 0.175, "plane_angle": 34.659 }, { "index": 49, "ntaa": "C-his", "nt": "///A/1660", "aa": "///D/134", "vertical_dist": 0.142, "plane_angle": 36.949 }, { "index": 50, "ntaa": "C-asn", "nt": "///A/1793", "aa": "///C/44", "vertical_dist": 0.858, "plane_angle": 41.611 }, { "index": 51, "ntaa": "U-asn", "nt": "///A/1799", "aa": "///C/44", "vertical_dist": 0.509, "plane_angle": 39.447 }, { "index": 52, "ntaa": "C-glu", "nt": "///A/1803", "aa": "///C/35", "vertical_dist": 0.997, "plane_angle": 16.901 }, { "index": 53, "ntaa": "U-his", "nt": "///A/1828", "aa": "///C/244", "vertical_dist": 0.363, "plane_angle": 27.314 }, { "index": 54, "ntaa": "C-tyr", "nt": "///A/1983", "aa": "///K/32", "vertical_dist": 0.004, "plane_angle": 46.283 }, { "index": 55, "ntaa": "C-his", "nt": "///A/2032", "aa": "///2/19", "vertical_dist": 0.512, "plane_angle": 61.312 }, { "index": 56, "ntaa": "A-asn", "nt": "///A/2077", "aa": "///X/32", "vertical_dist": 0.572, "plane_angle": 40.908 }, { "index": 57, "ntaa": "U-gln", "nt": "///A/2216", "aa": "///X/34", "vertical_dist": 0.276, "plane_angle": 60.845 }, { "index": 58, "ntaa": "G-arg", "nt": "///A/2266", "aa": "///W/14", "vertical_dist": 1.020, "plane_angle": 15.089 }, { "index": 59, "ntaa": "G-gln", "nt": "///A/2338", "aa": "///5/42", "vertical_dist": 2.041, "plane_angle": 46.348 }, { "index": 60, "ntaa": "A-gln", "nt": "///A/2345", "aa": "///L/54", "vertical_dist": 0.985, "plane_angle": 63.000 }, { "index": 61, "ntaa": "U-arg", "nt": "///A/2350", "aa": "///W/39", "vertical_dist": 1.139, "plane_angle": 26.316 }, { "index": 62, "ntaa": "G-gln", "nt": "///A/2352", "aa": "///5/42", "vertical_dist": 0.194, "plane_angle": 54.356 }, { "index": 63, "ntaa": "A-arg", "nt": "///A/2363", "aa": "///O/110", "vertical_dist": 0.421, "plane_angle": 26.244 }, { "index": 64, "ntaa": "G-arg", "nt": "///A/2415", "aa": "///L/60", "vertical_dist": 2.461, "plane_angle": 49.687 }, { "index": 65, "ntaa": "G-gln", "nt": "///A/2416", "aa": "///L/55", "vertical_dist": 0.163, "plane_angle": 17.530 }, { "index": 66, "ntaa": "A-gln", "nt": "///A/2500", "aa": "///D/148", "vertical_dist": 0.214, "plane_angle": 39.568 }, { "index": 67, "ntaa": "G-arg", "nt": "///A/2516", "aa": "///6/32", "vertical_dist": 2.372, "plane_angle": 62.017 }, { "index": 68, "ntaa": "A-gln", "nt": "///A/2559", "aa": "///D/150", "vertical_dist": 1.994, "plane_angle": 32.257 }, { "index": 69, "ntaa": "G-gln", "nt": "///A/2620", "aa": "///D/65", "vertical_dist": 1.165, "plane_angle": 41.877 }, { "index": 70, "ntaa": "C-his", "nt": "///A/2654", "aa": "///G/111", "vertical_dist": 1.783, "plane_angle": 5.884 }, { "index": 71, "ntaa": "G-gln", "nt": "///A/2731", "aa": "///G/143", "vertical_dist": 0.280, "plane_angle": 54.083 }, { "index": 72, "ntaa": "G-glu", "nt": "///A/2767", "aa": "///J/102", "vertical_dist": 1.111, "plane_angle": 42.480 }, { "index": 73, "ntaa": "G-arg", "nt": "///A/2818", "aa": "///D/60", "vertical_dist": 0.243, "plane_angle": 19.204 }, { "index": 74, "ntaa": "U-his", "nt": "///A/2871", "aa": "///2/37", "vertical_dist": 1.006, "plane_angle": 18.238 }, { "index": 75, "ntaa": "C-his", "nt": "///B/37", "aa": "///O/99", "vertical_dist": 0.970, "plane_angle": 50.184 }, { "index": 76, "ntaa": "C-arg", "nt": "///B/43", "aa": "///F/92", "vertical_dist": 1.243, "plane_angle": 24.133 }, { "index": 77, "ntaa": "U-tyr", "nt": "///B/82", "aa": "///Z/51", "vertical_dist": 0.783, "plane_angle": 36.091 } ], "num_ntAA_stacks": 62, "ntAA_stacks": [ { "index": 1, "ntaa": "G-arg", "nt": "///a/102", "aa": "///t/10", "vertical_dist": 4.610, "plane_angle": 32.239 }, { "index": 2, "ntaa": "U-arg", "nt": "///a/255", "aa": "///t/74", "vertical_dist": 3.170, "plane_angle": 41.221 }, { "index": 3, "ntaa": "U-arg", "nt": "///a/415", "aa": "///c/127", "vertical_dist": 4.016, "plane_angle": 56.505 }, { "index": 4, "ntaa": "A-tyr", "nt": "///a/554", "aa": "///e/129", "vertical_dist": 3.697, "plane_angle": 20.561 }, { "index": 5, "ntaa": "A-his", "nt": "///a/712", "aa": "///k/118", "vertical_dist": 3.628, "plane_angle": 56.072 }, { "index": 6, "ntaa": "A-arg", "nt": "///a/722", "aa": "///o/54", "vertical_dist": 4.972, "plane_angle": 63.124 }, { "index": 7, "ntaa": "U-arg", "nt": "///a/944", "aa": "///m/101", "vertical_dist": 2.839, "plane_angle": 39.984 }, { "index": 8, "ntaa": "A-arg", "nt": "///a/952", "aa": "///s/55", "vertical_dist": 4.145, "plane_angle": 18.464 }, { "index": 9, "ntaa": "A-his", "nt": "///a/968", "aa": "///n/71", "vertical_dist": 4.226, "plane_angle": 17.303 }, { "index": 10, "ntaa": "A-trp", "nt": "///a/1008", "aa": "///s/34", "vertical_dist": 3.394, "plane_angle": 9.738 }, { "index": 11, "ntaa": "G-arg", "nt": "///a/1172", "aa": "///i/99", "vertical_dist": 3.978, "plane_angle": 33.879 }, { "index": 12, "ntaa": "U-asn", "nt": "///a/1196", "aa": "///n/82", "vertical_dist": 3.394, "plane_angle": 40.498 }, { "index": 13, "ntaa": "U-glu", "nt": "///a/1234", "aa": "///g/32", "vertical_dist": 3.847, "plane_angle": 34.363 }, { "index": 14, "ntaa": "C-arg", "nt": "///a/1302", "aa": "///m/98", "vertical_dist": 3.438, "plane_angle": 19.476 }, { "index": 15, "ntaa": "G-arg", "nt": "///a/1341", "aa": "///i/109", "vertical_dist": 4.316, "plane_angle": 32.797 }, { "index": 16, "ntaa": "G-arg", "nt": "///A/124", "aa": "///4/19", "vertical_dist": 3.774, "plane_angle": 22.782 }, { "index": 17, "ntaa": "A-phe", "nt": "///A/126", "aa": "///4/18", "vertical_dist": 4.061, "plane_angle": 10.143 }, { "index": 18, "ntaa": "G-arg", "nt": "///A/363", "aa": "///X/57", "vertical_dist": 3.126, "plane_angle": 24.459 }, { "index": 19, "ntaa": "A-arg", "nt": "///A/434", "aa": "///E/39", "vertical_dist": 4.226, "plane_angle": 41.770 }, { "index": 20, "ntaa": "G-arg", "nt": "///A/458", "aa": "///4/39", "vertical_dist": 3.741, "plane_angle": 14.012 }, { "index": 21, "ntaa": "A-his", "nt": "///A/474", "aa": "///U/44", "vertical_dist": 5.040, "plane_angle": 33.950 }, { "index": 22, "ntaa": "A-arg", "nt": "///A/499", "aa": "///S/80", "vertical_dist": 0.984, "plane_angle": 37.281 }, { "index": 23, "ntaa": "U-phe", "nt": "///A/578", "aa": "///E/84", "vertical_dist": 4.161, "plane_angle": 47.665 }, { "index": 24, "ntaa": "U-tyr", "nt": "///A/605", "aa": "///E/34", "vertical_dist": 3.421, "plane_angle": 27.519 }, { "index": 25, "ntaa": "U-arg", "nt": "///A/616", "aa": "///L/78", "vertical_dist": 3.695, "plane_angle": 29.978 }, { "index": 26, "ntaa": "A-arg", "nt": "///A/633", "aa": "///3/40", "vertical_dist": 4.827, "plane_angle": 44.869 }, { "index": 27, "ntaa": "C-arg", "nt": "///A/661", "aa": "///L/33", "vertical_dist": 3.589, "plane_angle": 25.656 }, { "index": 28, "ntaa": "G-asn", "nt": "///A/774", "aa": "///C/226", "vertical_dist": 4.365, "plane_angle": 38.450 }, { "index": 29, "ntaa": "A-arg", "nt": "///A/779", "aa": "///4/3", "vertical_dist": 4.667, "plane_angle": 46.952 }, { "index": 30, "ntaa": "G-arg", "nt": "///A/791", "aa": "///E/48", "vertical_dist": 3.527, "plane_angle": 18.277 }, { "index": 31, "ntaa": "C-arg", "nt": "///A/796", "aa": "///L/41", "vertical_dist": 4.183, "plane_angle": 33.628 }, { "index": 32, "ntaa": "U-arg", "nt": "///A/801", "aa": "///L/21", "vertical_dist": 4.204, "plane_angle": 31.917 }, { "index": 33, "ntaa": "G-phe", "nt": "///A/846", "aa": "///W/26", "vertical_dist": 4.993, "plane_angle": 58.565 }, { "index": 34, "ntaa": "A-phe", "nt": "///A/900", "aa": "///M/9", "vertical_dist": 3.557, "plane_angle": 5.532 }, { "index": 35, "ntaa": "C-phe", "nt": "///A/985", "aa": "///Q/57", "vertical_dist": 4.189, "plane_angle": 20.148 }, { "index": 36, "ntaa": "A-gln", "nt": "///A/1088", "aa": "///I/30", "vertical_dist": 3.483, "plane_angle": 34.107 }, { "index": 37, "ntaa": "G-his", "nt": "///A/1121", "aa": "///J/77", "vertical_dist": 3.794, "plane_angle": 15.813 }, { "index": 38, "ntaa": "U-tyr", "nt": "///A/1122", "aa": "///J/75", "vertical_dist": 3.808, "plane_angle": 30.431 }, { "index": 39, "ntaa": "A-arg", "nt": "///A/1134", "aa": "///J/27", "vertical_dist": 4.464, "plane_angle": 42.248 }, { "index": 40, "ntaa": "G-gln", "nt": "///A/1235", "aa": "///E/45", "vertical_dist": 3.962, "plane_angle": 47.004 }, { "index": 41, "ntaa": "U-arg", "nt": "///A/1236", "aa": "///L/18", "vertical_dist": 3.572, "plane_angle": 9.173 }, { "index": 42, "ntaa": "G-gln", "nt": "///A/1253", "aa": "///S/15", "vertical_dist": 4.059, "plane_angle": 23.911 }, { "index": 43, "ntaa": "A-his", "nt": "///A/1262", "aa": "///N/16", "vertical_dist": 3.943, "plane_angle": 59.392 }, { "index": 44, "ntaa": "A-asp", "nt": "///A/1274", "aa": "///N/106", "vertical_dist": 3.305, "plane_angle": 36.729 }, { "index": 45, "ntaa": "A-trp", "nt": "///A/1556", "aa": "///C/213", "vertical_dist": 3.790, "plane_angle": 10.732 }, { "index": 46, "ntaa": "A-tyr", "nt": "///A/1557", "aa": "///C/83", "vertical_dist": 3.889, "plane_angle": 16.997 }, { "index": 47, "ntaa": "C-his", "nt": "///A/1665", "aa": "///D/134", "vertical_dist": 3.502, "plane_angle": 13.794 }, { "index": 48, "ntaa": "A-arg", "nt": "///A/1788", "aa": "///C/263", "vertical_dist": 3.981, "plane_angle": 9.181 }, { "index": 49, "ntaa": "A-arg", "nt": "///A/1795", "aa": "///X/28", "vertical_dist": 3.370, "plane_angle": 31.461 }, { "index": 50, "ntaa": "C-tyr", "nt": "///A/1803", "aa": "///C/62", "vertical_dist": 3.596, "plane_angle": 18.269 }, { "index": 51, "ntaa": "G-gln", "nt": "///A/2019", "aa": "///D/150", "vertical_dist": 4.518, "plane_angle": 57.918 }, { "index": 52, "ntaa": "A-gln", "nt": "///A/2041", "aa": "///2/5", "vertical_dist": 3.859, "plane_angle": 17.000 }, { "index": 53, "ntaa": "A-phe", "nt": "///A/2185", "aa": "///H/29", "vertical_dist": 3.702, "plane_angle": 32.173 }, { "index": 54, "ntaa": "G-asn", "nt": "///A/2217", "aa": "///X/32", "vertical_dist": 4.197, "plane_angle": 36.352 }, { "index": 55, "ntaa": "G-asn", "nt": "///A/2264", "aa": "///W/12", "vertical_dist": 4.142, "plane_angle": 26.655 }, { "index": 56, "ntaa": "C-arg", "nt": "///A/2272", "aa": "///3/2", "vertical_dist": 3.287, "plane_angle": 31.816 }, { "index": 57, "ntaa": "A-tyr", "nt": "///A/2363", "aa": "///O/98", "vertical_dist": 3.882, "plane_angle": 25.856 }, { "index": 58, "ntaa": "A-tyr", "nt": "///A/2517", "aa": "///G/157", "vertical_dist": 4.417, "plane_angle": 51.208 }, { "index": 59, "ntaa": "G-arg", "nt": "///A/2695", "aa": "///N/71", "vertical_dist": 4.399, "plane_angle": 41.664 }, { "index": 60, "ntaa": "C-arg", "nt": "///A/2742", "aa": "///6/19", "vertical_dist": 3.939, "plane_angle": 39.075 }, { "index": 61, "ntaa": "C-arg", "nt": "///A/2817", "aa": "///D/60", "vertical_dist": 3.320, "plane_angle": 15.076 }, { "index": 62, "ntaa": "U-arg", "nt": "///A/2871", "aa": "///2/39", "vertical_dist": 4.665, "plane_angle": 47.123 } ], "num_ntAA_mStacks": 24, "ntAA_mStacks": [ { "index": 1, "num_nts": 3, "nts_short": "AAR", "nts_long": "///a/953,///a/952,///s/55" }, { "index": 2, "num_nts": 3, "nts_short": "GAH", "nts_long": "///a/967,///a/968,///n/71" }, { "index": 3, "num_nts": 3, "nts_short": "GGR", "nts_long": "///A/123,///A/124,///4/19" }, { "index": 4, "num_nts": 3, "nts_short": "AAF", "nts_long": "///A/127,///A/126,///4/18" }, { "index": 5, "num_nts": 3, "nts_short": "CAH", "nts_long": "///A/475,///A/474,///U/44" }, { "index": 6, "num_nts": 3, "nts_short": "UUF", "nts_long": "///A/579,///A/578,///E/84" }, { "index": 7, "num_nts": 3, "nts_short": "AAR", "nts_long": "///A/741,///A/779,///4/3" }, { "index": 8, "num_nts": 3, "nts_short": "AAF", "nts_long": "///A/899,///A/900,///M/9" }, { "index": 9, "num_nts": 3, "nts_short": "AUY", "nts_long": "///A/1123,///A/1122,///J/75" }, { "index": 10, "num_nts": 3, "nts_short": "AUR", "nts_long": "///A/1234,///A/1236,///L/18" }, { "index": 11, "num_nts": 3, "nts_short": "UAR", "nts_long": "///A/2190,///A/1788,///C/263" }, { "index": 12, "num_nts": 3, "nts_short": "UAY", "nts_long": "///A/2515,///A/2517,///G/157" }, { "index": 13, "num_nts": 4, "nts_short": "UGGR", "nts_long": "///a/1366,///a/1367,///a/1341,///i/109" }, { "index": 14, "num_nts": 4, "nts_short": "GGUR", "nts_long": "///A/594,///A/615,///A/616,///L/78" }, { "index": 15, "num_nts": 4, "nts_short": "CCAY", "nts_long": "///A/1554,///A/1555,///A/1557,///C/83" }, { "index": 16, "num_nts": 4, "nts_short": "AAAY", "nts_long": "///A/2365,///A/2364,///A/2363,///O/98" }, { "index": 17, "num_nts": 5, "nts_short": "CUGAY", "nts_long": "///a/558,///a/559,///a/560,///a/554,///e/129" }, { "index": 18, "num_nts": 5, "nts_short": "GGAAR", "nts_long": "///a/725,///a/724,///a/723,///a/722,///o/54" }, { "index": 19, "num_nts": 5, "nts_short": "UAGAW", "nts_long": "///a/1011,///a/1010,///a/1009,///a/1008,///s/34" }, { "index": 20, "num_nts": 5, "nts_short": "GAAAR", "nts_long": "///A/637,///A/636,///A/634,///A/633,///3/40" }, { "index": 21, "num_nts": 5, "nts_short": "UAGGF", "nts_long": "///A/849,///A/2255,///A/847,///A/846,///W/26" }, { "index": 22, "num_nts": 5, "nts_short": "GGCUR", "nts_long": "///A/1243,///A/575,///A/1238,///A/801,///L/21" }, { "index": 23, "num_nts": 6, "nts_short": "CUCGAQ", "nts_long": "///A/1092,///A/1091,///A/1090,///A/1089,///A/1088,///I/30" }, { "index": 24, "num_nts": 8, "nts_short": "CAGACCAH", "nts_long": "///a/726,///a/659,///a/727,///a/715,///a/714,///a/713,///a/712,///k/118" } ], "num_nts": 4526, "nts": [ { "index": 1, "index_chain": 1, "chain_name": "a", "nt_resnum": 2, "nt_name": "A", "nt_code": "A", "nt_id": "///a/2", "linked_nts": [ null, "///a/3" ], "nt_type": "RNA", "dbn": ".", "summary": "", "alpha": null, "beta": null, "gamma": 93.396, "delta": 84.305, "epsilon": -115.850, "zeta": -71.528, "epsilon_zeta": -44.322, "bb_type": "--", "chi": -57.507, "glyco_bond": "--", "C5prime_xyz": [ -3.374, 5.586, -3.400 ], "P_xyz": [ null, null, null ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": null, "theta": null, "eta_prime": null, "theta_prime": null, "eta_base": null, "theta_base": null, "v0": 4.040, "v1": -24.895, "v2": 35.169, "v3": -33.911, "v4": 18.790, "amplitude": 36.007, "phase_angle": 12.384, "puckering": "C3'-endo", "sugar_class": "--", "bin": "inc", "cluster": "__", "suiteness": 0.000, "filter_rmsd": 0.035, "frame": { "rmsd": 0.010, "origin": [ 244.281, 182.591, 326.053 ], "x_axis": [ 0.611, 0.780, 0.136 ], "y_axis": [ -0.580, 0.558, -0.594 ], "z_axis": [ -0.539, 0.284, 0.793 ], "quaternion": [ 0.860, -0.255, -0.196, 0.395 ] } }, { "index": 2, "index_chain": 2, "chain_name": "a", "nt_resnum": 3, "nt_name": "A", "nt_code": "A", "nt_id": "///a/3", "linked_nts": [ "///a/2", "///a/4" ], "nt_type": "RNA", "dbn": ".", "summary": "syn", "alpha": -139.927, "beta": -116.198, "gamma": 67.565, "delta": 79.760, "epsilon": -128.472, "zeta": -114.555, "epsilon_zeta": -13.917, "bb_type": "--", "chi": 53.485, "glyco_bond": "syn", "C5prime_xyz": [ -5.625, 4.414, 1.355 ], "P_xyz": [ -5.866, 1.882, 0.988 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 128.583, "theta": -163.112, "eta_prime": 156.058, "theta_prime": -156.660, "eta_base": -171.568, "theta_base": 149.500, "v0": -10.063, "v1": -14.356, "v2": 31.637, "v3": -38.331, "v4": 30.628, "amplitude": 37.979, "phase_angle": 33.589, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.008, "origin": [ 244.499, 183.959, 321.645 ], "x_axis": [ 0.735, 0.081, 0.673 ], "y_axis": [ 0.063, 0.981, -0.186 ], "z_axis": [ -0.675, 0.179, 0.716 ], "quaternion": [ 0.926, -0.099, -0.364, 0.005 ] } }, { "index": 3, "index_chain": 3, "chain_name": "a", "nt_resnum": 4, "nt_name": "C", "nt_code": "C", "nt_id": "///a/4", "linked_nts": [ "///a/3", "///a/5" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -59.748, "beta": 127.259, "gamma": 67.462, "delta": 86.680, "epsilon": -155.219, "zeta": -129.053, "epsilon_zeta": -26.166, "bb_type": "--", "chi": -123.118, "glyco_bond": "anti", "C5prime_xyz": [ -1.604, 8.427, -1.594 ], "P_xyz": [ 0.424, 7.467, -2.972 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.046, "theta": 167.590, "eta_prime": 176.108, "theta_prime": 164.045, "eta_base": 139.107, "theta_base": 168.156, "v0": 3.735, "v1": -22.813, "v2": 32.101, "v3": -30.796, "v4": 17.138, "amplitude": 32.845, "phase_angle": 12.214, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.516, "filter_rmsd": 0.074, "frame": { "rmsd": 0.016, "origin": [ 247.544, 186.961, 320.324 ], "x_axis": [ -0.286, -0.939, 0.192 ], "y_axis": [ -0.395, -0.067, -0.916 ], "z_axis": [ 0.873, -0.338, -0.352 ], "quaternion": [ 0.272, -0.532, 0.627, -0.500 ] } }, { "index": 4, "index_chain": 4, "chain_name": "a", "nt_resnum": 5, "nt_name": "U", "nt_code": "U", "nt_id": "///a/5", "linked_nts": [ "///a/4", "///a/6" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-stack", "alpha": -42.122, "beta": -174.484, "gamma": 48.271, "delta": 76.608, "epsilon": 179.460, "zeta": -81.166, "epsilon_zeta": -99.375, "bb_type": "BI", "chi": -137.253, "glyco_bond": "anti", "C5prime_xyz": [ -2.205, 8.791, -0.866 ], "P_xyz": [ 0.052, 10.082, -1.172 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -155.448, "theta": -179.074, "eta_prime": -170.932, "theta_prime": 163.767, "eta_base": 177.157, "theta_base": 149.614, "v0": -5.694, "v1": -18.819, "v2": 34.668, "v3": -38.937, "v4": 28.115, "amplitude": 38.845, "phase_angle": 26.813, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "7a", "suiteness": 0.566, "filter_rmsd": 0.105, "frame": { "rmsd": 0.008, "origin": [ 256.855, 189.807, 311.238 ], "x_axis": [ 0.156, -0.845, 0.511 ], "y_axis": [ -0.943, -0.282, -0.179 ], "z_axis": [ 0.295, -0.454, -0.841 ], "quaternion": [ 0.091, 0.755, -0.592, 0.267 ] } }, { "index": 5, "index_chain": 5, "chain_name": "a", "nt_resnum": 6, "nt_name": "G", "nt_code": "G", "nt_id": "///a/6", "linked_nts": [ "///a/5", "///a/7" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BI,non-stack", "alpha": 166.016, "beta": 108.439, "gamma": 159.226, "delta": 155.971, "epsilon": -155.164, "zeta": -103.760, "epsilon_zeta": -51.404, "bb_type": "BI", "chi": 92.444, "glyco_bond": "syn", "C5prime_xyz": [ -3.416, 3.620, 2.312 ], "P_xyz": [ -2.447, 3.759, 4.765 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.884, "theta": 163.480, "eta_prime": 146.800, "theta_prime": 164.586, "eta_base": 142.303, "theta_base": 108.251, "v0": 19.453, "v1": 2.769, "v2": -22.138, "v3": 33.898, "v4": -33.640, "amplitude": 35.199, "phase_angle": 231.028, "puckering": "C4'-endo", "sugar_class": "--", "bin": "32t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.002, "frame": { "rmsd": 0.002, "origin": [ 255.535, 190.934, 307.346 ], "x_axis": [ -0.168, 0.771, 0.614 ], "y_axis": [ -0.616, 0.404, -0.676 ], "z_axis": [ -0.770, -0.492, 0.407 ], "quaternion": [ 0.641, -0.072, -0.540, 0.541 ] } }, { "index": 6, "index_chain": 6, "chain_name": "a", "nt_resnum": 7, "nt_name": "A", "nt_code": "A", "nt_id": "///a/7", "linked_nts": [ "///a/6", "///a/8" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 16.286, "beta": -153.605, "gamma": -79.557, "delta": 145.610, "epsilon": -87.895, "zeta": -96.300, "epsilon_zeta": 8.406, "bb_type": "--", "chi": -134.563, "glyco_bond": "anti", "C5prime_xyz": [ -1.991, 8.653, -0.441 ], "P_xyz": [ -1.882, 11.204, -0.984 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -176.556, "theta": -115.083, "eta_prime": -179.639, "theta_prime": -111.336, "eta_base": 147.986, "theta_base": -94.790, "v0": -22.498, "v1": 36.045, "v2": -34.989, "v3": 22.910, "v4": -0.520, "amplitude": 36.802, "phase_angle": 161.940, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.013, "origin": [ 253.917, 199.553, 299.841 ], "x_axis": [ -0.059, 0.086, 0.995 ], "y_axis": [ 0.051, -0.995, 0.089 ], "z_axis": [ 0.997, 0.056, 0.055 ], "quaternion": [ 0.012, 0.686, 0.050, 0.726 ] } }, { "index": 7, "index_chain": 7, "chain_name": "a", "nt_resnum": 8, "nt_name": "A", "nt_code": "A", "nt_id": "///a/8", "linked_nts": [ "///a/7", "///a/9" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -36.494, "beta": -173.349, "gamma": 81.140, "delta": 148.433, "epsilon": -107.217, "zeta": -108.805, "epsilon_zeta": 1.588, "bb_type": "--", "chi": -142.384, "glyco_bond": "anti", "C5prime_xyz": [ -2.500, 8.689, -0.071 ], "P_xyz": [ -0.315, 9.610, 1.035 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -126.380, "theta": -108.188, "eta_prime": -75.074, "theta_prime": -119.024, "eta_base": -67.538, "theta_base": -95.694, "v0": -26.954, "v1": 40.781, "v2": -38.257, "v3": 23.764, "v4": 1.688, "amplitude": 41.033, "phase_angle": 158.804, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "2[", "suiteness": 0.010, "filter_rmsd": 0.039, "frame": { "rmsd": 0.015, "origin": [ 262.498, 185.138, 292.165 ], "x_axis": [ -0.415, -0.737, 0.534 ], "y_axis": [ -0.694, 0.636, 0.338 ], "z_axis": [ -0.588, -0.230, -0.775 ], "quaternion": [ -0.334, -0.426, 0.841, 0.032 ] } }, { "index": 8, "index_chain": 8, "chain_name": "a", "nt_resnum": 9, "nt_name": "G", "nt_code": "G", "nt_id": "///a/9", "linked_nts": [ "///a/8", "///a/10" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": -83.562, "beta": 127.067, "gamma": 111.004, "delta": 80.313, "epsilon": -147.635, "zeta": -75.362, "epsilon_zeta": -72.273, "bb_type": "BI", "chi": -176.246, "glyco_bond": "anti", "C5prime_xyz": [ -1.324, 8.476, 1.459 ], "P_xyz": [ 0.334, 9.599, -0.218 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -173.674, "theta": -158.418, "eta_prime": -138.751, "theta_prime": -163.676, "eta_base": -88.599, "theta_base": -144.400, "v0": 4.771, "v1": -27.919, "v2": 39.196, "v3": -37.413, "v4": 20.571, "amplitude": 40.048, "phase_angle": 11.842, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 256.459, 190.441, 282.412 ], "x_axis": [ -0.714, 0.698, 0.045 ], "y_axis": [ 0.422, 0.379, 0.823 ], "z_axis": [ 0.558, 0.607, -0.566 ], "quaternion": [ 0.157, 0.344, 0.815, 0.439 ] } }, { "index": 9, "index_chain": 9, "chain_name": "a", "nt_resnum": 10, "nt_name": "A", "nt_code": "A", "nt_id": "///a/10", "linked_nts": [ "///a/9", "///a/11" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -63.836, "beta": 165.474, "gamma": 66.579, "delta": 78.785, "epsilon": -137.604, "zeta": -85.921, "epsilon_zeta": -51.683, "bb_type": "BI", "chi": -178.337, "glyco_bond": "anti", "C5prime_xyz": [ -1.510, 8.460, 1.558 ], "P_xyz": [ 1.065, 8.915, 1.637 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.006, "theta": -148.503, "eta_prime": -170.201, "theta_prime": -147.132, "eta_base": -133.961, "theta_base": -122.699, "v0": 2.084, "v1": -25.840, "v2": 38.587, "v3": -38.292, "v4": 22.799, "amplitude": 40.064, "phase_angle": 15.604, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.686, "filter_rmsd": 0.043, "frame": { "rmsd": 0.014, "origin": [ 257.227, 192.130, 278.578 ], "x_axis": [ -0.357, 0.850, 0.386 ], "y_axis": [ 0.673, -0.053, 0.738 ], "z_axis": [ 0.648, 0.524, -0.553 ], "quaternion": [ 0.096, 0.559, 0.682, 0.463 ] } }, { "index": 10, "index_chain": 10, "chain_name": "a", "nt_resnum": 11, "nt_name": "G", "nt_code": "G", "nt_id": "///a/11", "linked_nts": [ "///a/10", "///a/12" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -55.353, "beta": 161.028, "gamma": 57.473, "delta": 77.082, "epsilon": -134.845, "zeta": -71.586, "epsilon_zeta": -63.259, "bb_type": "BI", "chi": -163.003, "glyco_bond": "anti", "C5prime_xyz": [ -1.289, 8.727, 0.687 ], "P_xyz": [ 1.288, 9.061, 0.411 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.658, "theta": -136.033, "eta_prime": -176.114, "theta_prime": -135.714, "eta_base": -138.370, "theta_base": -108.057, "v0": 3.679, "v1": -27.579, "v2": 39.832, "v3": -38.645, "v4": 22.076, "amplitude": 40.966, "phase_angle": 13.514, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.727, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 257.617, 194.481, 275.789 ], "x_axis": [ 0.139, 0.745, 0.652 ], "y_axis": [ 0.835, -0.442, 0.327 ], "z_axis": [ 0.532, 0.499, -0.683 ], "quaternion": [ -0.057, 0.752, 0.525, 0.394 ] } }, { "index": 11, "index_chain": 11, "chain_name": "a", "nt_resnum": 12, "nt_name": "U", "nt_code": "U", "nt_id": "///a/12", "linked_nts": [ "///a/11", "///a/13" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end,multiplet", "alpha": -67.840, "beta": 168.614, "gamma": 61.175, "delta": 77.133, "epsilon": -137.504, "zeta": -107.851, "epsilon_zeta": -29.654, "bb_type": "--", "chi": -158.888, "glyco_bond": "anti", "C5prime_xyz": [ -1.662, 8.801, 0.419 ], "P_xyz": [ 0.816, 9.537, 0.160 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.648, "theta": -143.215, "eta_prime": -178.834, "theta_prime": -144.558, "eta_base": -134.643, "theta_base": -160.514, "v0": 0.220, "v1": -24.802, "v2": 38.577, "v3": -39.405, "v4": 24.682, "amplitude": 40.612, "phase_angle": 18.212, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.791, "filter_rmsd": 0.107, "frame": { "rmsd": 0.016, "origin": [ 258.470, 197.955, 274.828 ], "x_axis": [ 0.456, 0.236, 0.858 ], "y_axis": [ 0.713, -0.673, -0.193 ], "z_axis": [ 0.532, 0.700, -0.475 ], "quaternion": [ -0.277, 0.807, 0.294, 0.431 ] } }, { "index": 12, "index_chain": 12, "chain_name": "a", "nt_resnum": 13, "nt_name": "U", "nt_code": "U", "nt_id": "///a/13", "linked_nts": [ "///a/12", "///a/14" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-stack,non-canonical,helix,multiplet", "alpha": 82.058, "beta": 168.964, "gamma": -67.590, "delta": 145.483, "epsilon": -110.481, "zeta": -67.412, "epsilon_zeta": -43.069, "bb_type": "--", "chi": -111.340, "glyco_bond": "anti", "C5prime_xyz": [ -2.388, 8.336, -1.608 ], "P_xyz": [ -2.228, 10.934, -1.898 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -149.998, "theta": -90.581, "eta_prime": -149.152, "theta_prime": -86.819, "eta_base": -170.406, "theta_base": -54.368, "v0": -25.044, "v1": 38.253, "v2": -36.023, "v3": 22.461, "v4": 1.390, "amplitude": 38.547, "phase_angle": 159.150, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32m", "cluster": "7r", "suiteness": 0.585, "filter_rmsd": 0.098, "frame": { "rmsd": 0.018, "origin": [ 258.678, 204.739, 270.262 ], "x_axis": [ -0.003, 0.117, 0.993 ], "y_axis": [ 0.698, -0.711, 0.086 ], "z_axis": [ 0.716, 0.693, -0.080 ], "quaternion": [ -0.227, 0.668, 0.305, 0.639 ] } }, { "index": 13, "index_chain": 13, "chain_name": "a", "nt_resnum": 14, "nt_name": "U", "nt_code": "U", "nt_id": "///a/14", "linked_nts": [ "///a/13", "///a/15" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-stack", "alpha": -82.495, "beta": 171.128, "gamma": 63.448, "delta": 78.449, "epsilon": -144.384, "zeta": -92.480, "epsilon_zeta": -51.904, "bb_type": "BI", "chi": -148.261, "glyco_bond": "anti", "C5prime_xyz": [ -1.910, 8.824, -0.205 ], "P_xyz": [ 0.514, 9.630, -0.791 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 146.445, "theta": -138.047, "eta_prime": -168.302, "theta_prime": -173.322, "eta_base": -134.658, "theta_base": 133.572, "v0": -2.949, "v1": -20.680, "v2": 35.006, "v3": -37.614, "v4": 25.594, "amplitude": 37.997, "phase_angle": 22.885, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.608, "filter_rmsd": 0.101, "frame": { "rmsd": 0.013, "origin": [ 271.281, 198.683, 272.501 ], "x_axis": [ -0.326, -0.938, 0.120 ], "y_axis": [ -0.549, 0.085, -0.832 ], "z_axis": [ 0.770, -0.337, -0.542 ], "quaternion": [ 0.233, -0.532, 0.699, -0.418 ] } }, { "index": 14, "index_chain": 14, "chain_name": "a", "nt_resnum": 15, "nt_name": "G", "nt_code": "G", "nt_id": "///a/15", "linked_nts": [ "///a/14", "///a/16" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,canonical,helix", "alpha": 172.532, "beta": -176.721, "gamma": 57.856, "delta": 80.935, "epsilon": -117.321, "zeta": -67.167, "epsilon_zeta": -50.154, "bb_type": "--", "chi": -172.681, "glyco_bond": "anti", "C5prime_xyz": [ -1.570, 8.649, 1.243 ], "P_xyz": [ 0.853, 9.125, 2.122 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 54.366, "theta": -122.316, "eta_prime": 63.791, "theta_prime": -124.975, "eta_base": 39.284, "theta_base": -83.809, "v0": -1.210, "v1": -21.439, "v2": 34.602, "v3": -36.259, "v4": 23.621, "amplitude": 36.923, "phase_angle": 20.422, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.498, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 276.106, 206.636, 267.917 ], "x_axis": [ -0.767, 0.622, -0.156 ], "y_axis": [ -0.391, -0.647, -0.655 ], "z_axis": [ -0.508, -0.442, 0.739 ], "quaternion": [ 0.285, -0.187, -0.309, 0.888 ] } }, { "index": 15, "index_chain": 15, "chain_name": "a", "nt_resnum": 16, "nt_name": "A", "nt_code": "A", "nt_id": "///a/16", "linked_nts": [ "///a/15", "///a/17" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -109.261, "beta": 143.342, "gamma": 99.470, "delta": 78.854, "epsilon": -140.499, "zeta": -72.730, "epsilon_zeta": -67.770, "bb_type": "BI", "chi": -168.608, "glyco_bond": "anti", "C5prime_xyz": [ -1.499, 8.543, 1.003 ], "P_xyz": [ 0.399, 9.417, -0.546 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 141.783, "theta": -147.138, "eta_prime": 168.413, "theta_prime": -152.549, "eta_base": -129.251, "theta_base": -140.594, "v0": 3.594, "v1": -27.325, "v2": 39.417, "v3": -38.297, "v4": 21.888, "amplitude": 40.548, "phase_angle": 13.563, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.042, "frame": { "rmsd": 0.020, "origin": [ 273.224, 206.883, 269.878 ], "x_axis": [ -0.796, 0.115, -0.594 ], "y_axis": [ 0.036, -0.971, -0.235 ], "z_axis": [ -0.604, -0.209, 0.769 ], "quaternion": [ 0.021, -0.318, -0.118, 0.940 ] } }, { "index": 16, "index_chain": 16, "chain_name": "a", "nt_resnum": 17, "nt_name": "U", "nt_code": "U", "nt_id": "///a/17", "linked_nts": [ "///a/16", "///a/18" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -64.637, "beta": 173.766, "gamma": 64.543, "delta": 75.995, "epsilon": -143.220, "zeta": -76.044, "epsilon_zeta": -67.176, "bb_type": "BI", "chi": -153.097, "glyco_bond": "anti", "C5prime_xyz": [ -2.004, 8.862, 0.030 ], "P_xyz": [ 0.333, 9.907, -0.344 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.876, "theta": -150.824, "eta_prime": -172.152, "theta_prime": -149.637, "eta_base": -146.364, "theta_base": -112.805, "v0": -4.982, "v1": -20.181, "v2": 36.241, "v3": -40.118, "v4": 28.457, "amplitude": 40.177, "phase_angle": 25.573, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.740, "filter_rmsd": 0.103, "frame": { "rmsd": 0.012, "origin": [ 270.355, 208.737, 272.110 ], "x_axis": [ -0.684, -0.300, -0.665 ], "y_axis": [ 0.240, -0.953, 0.183 ], "z_axis": [ -0.689, -0.035, 0.724 ], "quaternion": [ -0.147, -0.369, 0.040, 0.917 ] } }, { "index": 17, "index_chain": 17, "chain_name": "a", "nt_resnum": 18, "nt_name": "C", "nt_code": "C", "nt_id": "///a/18", "linked_nts": [ "///a/17", "///a/19" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -96.985, "beta": 168.424, "gamma": 80.328, "delta": 79.824, "epsilon": -141.459, "zeta": -67.333, "epsilon_zeta": -74.126, "bb_type": "BI", "chi": -157.271, "glyco_bond": "anti", "C5prime_xyz": [ -1.293, 8.743, 0.356 ], "P_xyz": [ 1.150, 9.093, -0.464 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.824, "theta": -135.859, "eta_prime": 170.880, "theta_prime": -137.229, "eta_base": -139.794, "theta_base": -109.755, "v0": 3.425, "v1": -26.668, "v2": 38.541, "v3": -37.514, "v4": 21.442, "amplitude": 39.666, "phase_angle": 13.676, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.027, "filter_rmsd": 0.076, "frame": { "rmsd": 0.025, "origin": [ 266.823, 208.172, 273.150 ], "x_axis": [ -0.131, -0.784, -0.607 ], "y_axis": [ 0.454, -0.592, 0.666 ], "z_axis": [ -0.881, -0.189, 0.433 ], "quaternion": [ -0.421, -0.507, 0.163, 0.734 ] } }, { "index": 18, "index_chain": 18, "chain_name": "a", "nt_resnum": 19, "nt_name": "A", "nt_code": "A", "nt_id": "///a/19", "linked_nts": [ "///a/18", "///a/20" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -74.789, "beta": 174.414, "gamma": 72.780, "delta": 80.538, "epsilon": -152.512, "zeta": -73.577, "epsilon_zeta": -78.935, "bb_type": "BI", "chi": -145.991, "glyco_bond": "anti", "C5prime_xyz": [ -1.666, 8.756, -0.360 ], "P_xyz": [ 0.742, 9.341, -1.154 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.806, "theta": -149.846, "eta_prime": -169.808, "theta_prime": -151.495, "eta_base": -125.837, "theta_base": -129.032, "v0": -1.827, "v1": -21.797, "v2": 35.659, "v3": -37.616, "v4": 24.907, "amplitude": 38.245, "phase_angle": 21.193, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.407, "filter_rmsd": 0.042, "frame": { "rmsd": 0.016, "origin": [ 263.395, 206.210, 272.683 ], "x_axis": [ 0.188, -0.971, -0.147 ], "y_axis": [ 0.221, -0.103, 0.970 ], "z_axis": [ -0.957, -0.215, 0.195 ], "quaternion": [ 0.566, 0.524, -0.358, -0.527 ] } }, { "index": 19, "index_chain": 19, "chain_name": "a", "nt_resnum": 20, "nt_name": "U", "nt_code": "U", "nt_id": "///a/20", "linked_nts": [ "///a/19", "///a/21" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -73.089, "beta": 168.178, "gamma": 63.738, "delta": 81.238, "epsilon": -139.728, "zeta": -63.569, "epsilon_zeta": -76.159, "bb_type": "BI", "chi": -150.172, "glyco_bond": "anti", "C5prime_xyz": [ -1.692, 8.743, -0.087 ], "P_xyz": [ 0.781, 9.312, -0.629 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.521, "theta": -129.385, "eta_prime": -179.819, "theta_prime": -128.495, "eta_base": -145.129, "theta_base": -84.391, "v0": -0.349, "v1": -22.625, "v2": 35.600, "v3": -36.696, "v4": 23.397, "amplitude": 37.661, "phase_angle": 19.042, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.780, "filter_rmsd": 0.106, "frame": { "rmsd": 0.021, "origin": [ 260.369, 204.470, 272.527 ], "x_axis": [ 0.478, -0.832, 0.282 ], "y_axis": [ -0.040, 0.299, 0.953 ], "z_axis": [ -0.878, -0.467, 0.110 ], "quaternion": [ 0.687, 0.517, -0.422, -0.288 ] } }, { "index": 20, "index_chain": 20, "chain_name": "a", "nt_resnum": 21, "nt_name": "G", "nt_code": "G", "nt_id": "///a/21", "linked_nts": [ "///a/20", "///a/22" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -70.255, "beta": 165.039, "gamma": 67.424, "delta": 76.233, "epsilon": -144.045, "zeta": -68.520, "epsilon_zeta": -75.525, "bb_type": "BI", "chi": -151.236, "glyco_bond": "anti", "C5prime_xyz": [ -1.285, 8.840, 0.001 ], "P_xyz": [ 1.196, 9.239, -0.725 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.879, "theta": -152.684, "eta_prime": -171.763, "theta_prime": -162.517, "eta_base": -108.246, "theta_base": -172.589, "v0": 1.644, "v1": -25.916, "v2": 39.355, "v3": -39.277, "v4": 23.786, "amplitude": 41.011, "phase_angle": 16.337, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.620, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 259.546, 200.191, 275.097 ], "x_axis": [ 0.386, -0.208, 0.899 ], "y_axis": [ -0.566, 0.716, 0.409 ], "z_axis": [ -0.729, -0.666, 0.159 ], "quaternion": [ 0.752, 0.357, -0.541, 0.119 ] } }, { "index": 21, "index_chain": 21, "chain_name": "a", "nt_resnum": 22, "nt_name": "G", "nt_code": "G", "nt_id": "///a/22", "linked_nts": [ "///a/21", "///a/23" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -118.032, "beta": 133.807, "gamma": 125.885, "delta": 77.660, "epsilon": -124.271, "zeta": -75.370, "epsilon_zeta": -48.901, "bb_type": "--", "chi": -163.439, "glyco_bond": "anti", "C5prime_xyz": [ -1.041, 8.642, 0.743 ], "P_xyz": [ 0.208, 9.869, -1.174 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.821, "theta": -152.948, "eta_prime": 171.047, "theta_prime": -150.194, "eta_base": 173.203, "theta_base": -111.607, "v0": 4.381, "v1": -27.431, "v2": 39.097, "v3": -37.562, "v4": 20.898, "amplitude": 40.044, "phase_angle": 12.487, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 257.710, 196.865, 273.323 ], "x_axis": [ 0.383, -0.131, 0.914 ], "y_axis": [ -0.719, 0.579, 0.384 ], "z_axis": [ -0.580, -0.805, 0.127 ], "quaternion": [ 0.723, 0.411, -0.517, 0.203 ] } }, { "index": 22, "index_chain": 22, "chain_name": "a", "nt_resnum": 23, "nt_name": "C", "nt_code": "C", "nt_id": "///a/23", "linked_nts": [ "///a/22", "///a/24" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -56.266, "beta": 160.699, "gamma": 60.075, "delta": 78.495, "epsilon": -145.005, "zeta": -68.047, "epsilon_zeta": -76.958, "bb_type": "BI", "chi": -153.799, "glyco_bond": "anti", "C5prime_xyz": [ -1.592, 8.889, 0.109 ], "P_xyz": [ 0.921, 9.477, -0.294 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.521, "theta": -139.838, "eta_prime": -172.858, "theta_prime": -141.659, "eta_base": -119.215, "theta_base": -113.539, "v0": -2.886, "v1": -20.869, "v2": 35.299, "v3": -37.859, "v4": 25.728, "amplitude": 38.283, "phase_angle": 22.771, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.601, "filter_rmsd": 0.069, "frame": { "rmsd": 0.014, "origin": [ 257.792, 194.254, 275.894 ], "x_axis": [ -0.029, 0.431, 0.902 ], "y_axis": [ -0.932, 0.314, -0.180 ], "z_axis": [ -0.360, -0.846, 0.393 ], "quaternion": [ 0.648, 0.257, -0.487, 0.526 ] } }, { "index": 23, "index_chain": 23, "chain_name": "a", "nt_resnum": 24, "nt_name": "U", "nt_code": "U", "nt_id": "///a/24", "linked_nts": [ "///a/23", "///a/25" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -76.680, "beta": 169.123, "gamma": 62.853, "delta": 76.556, "epsilon": -144.486, "zeta": -85.494, "epsilon_zeta": -58.991, "bb_type": "BI", "chi": -151.971, "glyco_bond": "anti", "C5prime_xyz": [ -1.843, 8.816, -0.011 ], "P_xyz": [ 0.573, 9.609, -0.576 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.159, "theta": -157.503, "eta_prime": 175.530, "theta_prime": -156.404, "eta_base": -140.156, "theta_base": -139.471, "v0": -1.829, "v1": -23.148, "v2": 37.897, "v3": -39.916, "v4": 26.338, "amplitude": 40.612, "phase_angle": 21.070, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.749, "filter_rmsd": 0.105, "frame": { "rmsd": 0.016, "origin": [ 257.353, 192.287, 278.627 ], "x_axis": [ -0.438, 0.687, 0.580 ], "y_axis": [ -0.852, -0.112, -0.511 ], "z_axis": [ -0.286, -0.718, 0.634 ], "quaternion": [ 0.521, 0.100, -0.416, 0.739 ] } }, { "index": 24, "index_chain": 24, "chain_name": "a", "nt_resnum": 25, "nt_name": "C", "nt_code": "C", "nt_id": "///a/25", "linked_nts": [ "///a/24", "///a/26" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -64.506, "beta": 166.825, "gamma": 61.443, "delta": 79.201, "epsilon": -154.271, "zeta": -77.408, "epsilon_zeta": -76.862, "bb_type": "BI", "chi": -152.940, "glyco_bond": "anti", "C5prime_xyz": [ -1.600, 8.879, 0.065 ], "P_xyz": [ 0.905, 9.466, -0.329 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.766, "theta": -154.398, "eta_prime": 178.740, "theta_prime": -153.856, "eta_base": -155.537, "theta_base": -141.403, "v0": -2.668, "v1": -21.001, "v2": 35.285, "v3": -37.778, "v4": 25.515, "amplitude": 38.190, "phase_angle": 22.490, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.754, "filter_rmsd": 0.066, "frame": { "rmsd": 0.014, "origin": [ 257.041, 190.221, 282.099 ], "x_axis": [ -0.647, 0.754, 0.112 ], "y_axis": [ -0.631, -0.448, -0.634 ], "z_axis": [ -0.428, -0.481, 0.766 ], "quaternion": [ 0.409, -0.093, -0.329, 0.846 ] } }, { "index": 25, "index_chain": 25, "chain_name": "a", "nt_resnum": 26, "nt_name": "A", "nt_code": "A", "nt_id": "///a/26", "linked_nts": [ "///a/25", "///a/27" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -68.638, "beta": 178.922, "gamma": 60.150, "delta": 82.869, "epsilon": -115.880, "zeta": -68.622, "epsilon_zeta": -47.258, "bb_type": "--", "chi": -139.463, "glyco_bond": "anti", "C5prime_xyz": [ -1.755, 8.706, -0.742 ], "P_xyz": [ 0.719, 9.346, -1.278 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -176.088, "theta": -112.085, "eta_prime": -171.320, "theta_prime": -105.199, "eta_base": -155.467, "theta_base": -81.242, "v0": -2.762, "v1": -19.523, "v2": 33.023, "v3": -35.521, "v4": 24.168, "amplitude": 35.848, "phase_angle": 22.898, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.883, "filter_rmsd": 0.040, "frame": { "rmsd": 0.013, "origin": [ 256.205, 189.141, 285.818 ], "x_axis": [ -0.806, 0.562, -0.186 ], "y_axis": [ -0.428, -0.770, -0.473 ], "z_axis": [ -0.409, -0.302, 0.861 ], "quaternion": [ 0.267, -0.160, -0.209, 0.927 ] } }, { "index": 26, "index_chain": 26, "chain_name": "a", "nt_resnum": 27, "nt_name": "G", "nt_code": "G", "nt_id": "///a/27", "linked_nts": [ "///a/26", "///a/28" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -56.666, "beta": -178.574, "gamma": 66.552, "delta": 77.042, "epsilon": -135.310, "zeta": -77.496, "epsilon_zeta": -57.815, "bb_type": "BI", "chi": -171.375, "glyco_bond": "anti", "C5prime_xyz": [ -1.421, 8.671, 1.135 ], "P_xyz": [ 1.135, 9.196, 1.382 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -174.416, "theta": -143.632, "eta_prime": -151.085, "theta_prime": -139.504, "eta_base": -116.571, "theta_base": -99.653, "v0": 1.911, "v1": -25.947, "v2": 38.929, "v3": -38.740, "v4": 23.262, "amplitude": 40.479, "phase_angle": 15.907, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.354, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 245.374, 185.445, 286.406 ], "x_axis": [ -0.197, -0.161, -0.967 ], "y_axis": [ 0.889, -0.445, -0.107 ], "z_axis": [ -0.413, -0.881, 0.230 ], "quaternion": [ -0.384, -0.504, -0.361, 0.684 ] } }, { "index": 27, "index_chain": 27, "chain_name": "a", "nt_resnum": 28, "nt_name": "A", "nt_code": "A", "nt_id": "///a/28", "linked_nts": [ "///a/27", "///a/29" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -65.171, "beta": 156.857, "gamma": 69.861, "delta": 80.003, "epsilon": -143.320, "zeta": -77.833, "epsilon_zeta": -65.487, "bb_type": "BI", "chi": -153.870, "glyco_bond": "anti", "C5prime_xyz": [ -1.337, 8.724, 0.162 ], "P_xyz": [ 1.099, 9.025, -0.726 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.243, "theta": -115.201, "eta_prime": -171.893, "theta_prime": -130.250, "eta_base": -116.932, "theta_base": -120.548, "v0": 2.884, "v1": -26.032, "v2": 38.014, "v3": -37.308, "v4": 21.752, "amplitude": 39.256, "phase_angle": 14.448, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.489, "filter_rmsd": 0.044, "frame": { "rmsd": 0.015, "origin": [ 243.182, 183.131, 285.273 ], "x_axis": [ 0.302, -0.528, -0.794 ], "y_axis": [ 0.667, -0.477, 0.572 ], "z_axis": [ -0.681, -0.702, 0.208 ], "quaternion": [ 0.508, 0.627, 0.056, -0.588 ] } }, { "index": 28, "index_chain": 28, "chain_name": "a", "nt_resnum": 29, "nt_name": "U", "nt_code": "U", "nt_id": "///a/29", "linked_nts": [ "///a/28", "///a/30" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 105.893, "beta": -150.189, "gamma": -129.684, "delta": 82.229, "epsilon": -149.640, "zeta": -72.307, "epsilon_zeta": -77.333, "bb_type": "BI", "chi": -169.895, "glyco_bond": "anti", "C5prime_xyz": [ -1.212, 8.551, 1.148 ], "P_xyz": [ -0.578, 10.957, 0.382 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.587, "theta": -163.485, "eta_prime": -170.264, "theta_prime": -152.013, "eta_base": -136.359, "theta_base": -121.316, "v0": 3.523, "v1": -25.556, "v2": 36.792, "v3": -35.732, "v4": 20.321, "amplitude": 37.821, "phase_angle": 13.399, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.111, "frame": { "rmsd": 0.016, "origin": [ 240.215, 180.799, 282.800 ], "x_axis": [ 0.637, -0.554, -0.536 ], "y_axis": [ 0.463, -0.281, 0.841 ], "z_axis": [ -0.616, -0.784, 0.078 ], "quaternion": [ 0.599, 0.678, -0.033, -0.425 ] } }, { "index": 29, "index_chain": 29, "chain_name": "a", "nt_resnum": 30, "nt_name": "U", "nt_code": "U", "nt_id": "///a/30", "linked_nts": [ "///a/29", "///a/31" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 170.493, "beta": -165.678, "gamma": 178.494, "delta": 146.514, "epsilon": -121.134, "zeta": -50.188, "epsilon_zeta": -70.946, "bb_type": "--", "chi": -146.435, "glyco_bond": "anti", "C5prime_xyz": [ -2.008, 8.673, 0.191 ], "P_xyz": [ -0.017, 10.027, -0.802 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -152.974, "theta": -63.316, "eta_prime": -136.823, "theta_prime": -121.952, "eta_base": -108.354, "theta_base": -172.951, "v0": -22.456, "v1": 36.140, "v2": -35.353, "v3": 23.299, "v4": -0.787, "amplitude": 37.089, "phase_angle": 162.402, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "1t", "suiteness": 0.864, "filter_rmsd": 0.100, "frame": { "rmsd": 0.014, "origin": [ 239.107, 178.053, 280.538 ], "x_axis": [ 0.930, -0.366, 0.029 ], "y_axis": [ -0.093, -0.159, 0.983 ], "z_axis": [ -0.355, -0.917, -0.182 ], "quaternion": [ 0.630, 0.754, -0.152, -0.108 ] } }, { "index": 30, "index_chain": 30, "chain_name": "a", "nt_resnum": 31, "nt_name": "G", "nt_code": "G", "nt_id": "///a/31", "linked_nts": [ "///a/30", "///a/32" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": 123.504, "beta": 147.705, "gamma": 43.761, "delta": 144.257, "epsilon": -125.334, "zeta": -72.875, "epsilon_zeta": -52.458, "bb_type": "--", "chi": -109.458, "glyco_bond": "anti", "C5prime_xyz": [ -1.775, 8.261, -1.809 ], "P_xyz": [ 0.825, 8.539, -1.621 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -48.571, "theta": -39.012, "eta_prime": 38.477, "theta_prime": -69.564, "eta_base": 74.281, "theta_base": -65.343, "v0": -18.867, "v1": 32.045, "v2": -32.292, "v3": 22.246, "v4": -2.315, "amplitude": 33.407, "phase_angle": 165.151, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 223.789, 177.967, 284.545 ], "x_axis": [ 0.136, 0.983, -0.124 ], "y_axis": [ 0.982, -0.117, 0.146 ], "z_axis": [ 0.129, -0.142, -0.981 ], "quaternion": [ 0.096, 0.747, 0.657, 0.002 ] } }, { "index": 31, "index_chain": 31, "chain_name": "a", "nt_resnum": 32, "nt_name": "A", "nt_code": "A", "nt_id": "///a/32", "linked_nts": [ "///a/31", "///a/33" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 107.815, "beta": -152.398, "gamma": -101.824, "delta": 82.115, "epsilon": -131.429, "zeta": -91.885, "epsilon_zeta": -39.545, "bb_type": "--", "chi": 178.944, "glyco_bond": "anti", "C5prime_xyz": [ -1.076, 8.242, 1.754 ], "P_xyz": [ -0.638, 10.778, 2.232 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -162.073, "theta": 159.701, "eta_prime": -128.793, "theta_prime": 177.382, "eta_base": -96.183, "theta_base": -147.519, "v0": 5.265, "v1": -26.534, "v2": 36.478, "v3": -34.470, "v4": 18.504, "amplitude": 37.121, "phase_angle": 10.681, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.046, "frame": { "rmsd": 0.020, "origin": [ 239.598, 175.290, 278.467 ], "x_axis": [ 0.722, -0.112, 0.683 ], "y_axis": [ -0.691, -0.152, 0.706 ], "z_axis": [ 0.025, -0.982, -0.187 ], "quaternion": [ 0.588, 0.718, -0.280, 0.246 ] } }, { "index": 32, "index_chain": 32, "chain_name": "a", "nt_resnum": 33, "nt_name": "A", "nt_code": "A", "nt_id": "///a/33", "linked_nts": [ "///a/32", "///a/34" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -62.805, "beta": 158.279, "gamma": 57.119, "delta": 81.976, "epsilon": -138.531, "zeta": -74.964, "epsilon_zeta": -63.567, "bb_type": "BI", "chi": -167.667, "glyco_bond": "anti", "C5prime_xyz": [ -1.053, 8.450, 0.981 ], "P_xyz": [ 1.544, 8.448, 0.712 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.542, "theta": -136.521, "eta_prime": 177.359, "theta_prime": -136.107, "eta_base": -150.272, "theta_base": -111.315, "v0": 7.089, "v1": -28.848, "v2": 38.456, "v3": -35.404, "v4": 17.868, "amplitude": 38.867, "phase_angle": 8.332, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.591, "filter_rmsd": 0.042, "frame": { "rmsd": 0.020, "origin": [ 240.538, 172.604, 276.536 ], "x_axis": [ 0.282, -0.246, 0.927 ], "y_axis": [ -0.953, -0.180, 0.243 ], "z_axis": [ 0.107, -0.953, -0.285 ], "quaternion": [ 0.452, 0.661, -0.454, 0.391 ] } }, { "index": 33, "index_chain": 33, "chain_name": "a", "nt_resnum": 34, "nt_name": "C", "nt_code": "C", "nt_id": "///a/34", "linked_nts": [ "///a/33", "///a/35" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -68.098, "beta": 163.378, "gamma": 69.613, "delta": 80.724, "epsilon": -141.189, "zeta": -77.992, "epsilon_zeta": -63.197, "bb_type": "BI", "chi": -153.342, "glyco_bond": "anti", "C5prime_xyz": [ -1.516, 8.787, 0.092 ], "P_xyz": [ 0.960, 9.169, -0.628 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.096, "theta": -143.175, "eta_prime": -171.765, "theta_prime": -145.586, "eta_base": -128.506, "theta_base": -122.226, "v0": 1.548, "v1": -24.420, "v2": 36.698, "v3": -36.718, "v4": 22.172, "amplitude": 38.226, "phase_angle": 16.250, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.546, "filter_rmsd": 0.068, "frame": { "rmsd": 0.016, "origin": [ 242.513, 170.053, 276.862 ], "x_axis": [ -0.245, -0.369, 0.897 ], "y_axis": [ -0.886, -0.290, -0.362 ], "z_axis": [ 0.393, -0.883, -0.256 ], "quaternion": [ 0.229, 0.570, -0.550, 0.566 ] } }, { "index": 34, "index_chain": 34, "chain_name": "a", "nt_resnum": 35, "nt_name": "G", "nt_code": "G", "nt_id": "///a/35", "linked_nts": [ "///a/34", "///a/36" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -73.147, "beta": 177.213, "gamma": 55.797, "delta": 79.896, "epsilon": -148.037, "zeta": -74.321, "epsilon_zeta": -73.715, "bb_type": "BI", "chi": -161.755, "glyco_bond": "anti", "C5prime_xyz": [ -1.293, 8.776, 0.572 ], "P_xyz": [ 1.276, 9.215, 0.732 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.287, "theta": -147.299, "eta_prime": 172.658, "theta_prime": -145.079, "eta_base": -149.370, "theta_base": -116.295, "v0": 1.597, "v1": -25.095, "v2": 37.780, "v3": -37.755, "v4": 22.832, "amplitude": 39.352, "phase_angle": 16.252, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.905, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 244.255, 166.217, 277.509 ], "x_axis": [ -0.813, -0.005, 0.582 ], "y_axis": [ -0.581, -0.050, -0.812 ], "z_axis": [ 0.033, -0.999, 0.037 ], "quaternion": [ 0.209, 0.223, -0.657, 0.689 ] } }, { "index": 35, "index_chain": 35, "chain_name": "a", "nt_resnum": 36, "nt_name": "C", "nt_code": "C", "nt_id": "///a/36", "linked_nts": [ "///a/35", "///a/37" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -75.280, "beta": 175.902, "gamma": 60.091, "delta": 81.332, "epsilon": -145.408, "zeta": -67.150, "epsilon_zeta": -78.258, "bb_type": "BI", "chi": -160.740, "glyco_bond": "anti", "C5prime_xyz": [ -1.284, 8.723, 0.580 ], "P_xyz": [ 1.313, 9.033, 0.590 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.602, "theta": -136.757, "eta_prime": 176.953, "theta_prime": -136.093, "eta_base": -141.256, "theta_base": -100.146, "v0": 3.325, "v1": -25.844, "v2": 37.387, "v3": -36.274, "v4": 20.803, "amplitude": 38.471, "phase_angle": 13.633, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.854, "filter_rmsd": 0.073, "frame": { "rmsd": 0.018, "origin": [ 243.983, 163.102, 279.169 ], "x_axis": [ -0.980, 0.200, -0.002 ], "y_axis": [ -0.029, -0.151, -0.988 ], "z_axis": [ -0.198, -0.968, 0.153 ], "quaternion": [ 0.076, -0.066, -0.647, 0.756 ] } }, { "index": 36, "index_chain": 36, "chain_name": "a", "nt_resnum": 37, "nt_name": "U", "nt_code": "U", "nt_id": "///a/37", "linked_nts": [ "///a/36", "///a/38" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end,multiplet", "alpha": -72.271, "beta": 167.940, "gamma": 65.177, "delta": 77.007, "epsilon": -141.445, "zeta": -75.796, "epsilon_zeta": -65.650, "bb_type": "BI", "chi": -164.225, "glyco_bond": "anti", "C5prime_xyz": [ -1.391, 8.676, 0.794 ], "P_xyz": [ 1.161, 9.121, 0.530 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.273, "theta": -144.684, "eta_prime": -177.367, "theta_prime": -144.158, "eta_base": -121.425, "theta_base": -125.447, "v0": 2.993, "v1": -27.134, "v2": 39.857, "v3": -38.994, "v4": 22.649, "amplitude": 41.151, "phase_angle": 14.409, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.724, "filter_rmsd": 0.111, "frame": { "rmsd": 0.018, "origin": [ 241.229, 160.612, 280.202 ], "x_axis": [ -0.754, 0.138, -0.642 ], "y_axis": [ 0.574, -0.337, -0.746 ], "z_axis": [ -0.319, -0.931, 0.175 ], "quaternion": [ -0.145, -0.319, -0.557, 0.753 ] } }, { "index": 37, "index_chain": 37, "chain_name": "a", "nt_resnum": 38, "nt_name": "G", "nt_code": "G", "nt_id": "///a/38", "linked_nts": [ "///a/37", "///a/39" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -59.457, "beta": 167.721, "gamma": 64.466, "delta": 74.868, "epsilon": 174.752, "zeta": -94.979, "epsilon_zeta": -90.269, "bb_type": "BI", "chi": -166.552, "glyco_bond": "anti", "C5prime_xyz": [ -1.664, 8.784, 0.848 ], "P_xyz": [ 0.816, 9.538, 0.679 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.632, "theta": -179.936, "eta_prime": -168.326, "theta_prime": 149.299, "eta_base": -131.745, "theta_base": 126.898, "v0": -0.235, "v1": -24.972, "v2": 39.364, "v3": -40.508, "v4": 25.716, "amplitude": 41.609, "phase_angle": 18.903, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.704, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 237.882, 157.721, 281.474 ], "x_axis": [ -0.374, 0.012, -0.927 ], "y_axis": [ 0.866, -0.354, -0.354 ], "z_axis": [ -0.333, -0.935, 0.122 ], "quaternion": [ -0.314, -0.463, -0.474, 0.680 ] } }, { "index": 38, "index_chain": 38, "chain_name": "a", "nt_resnum": 39, "nt_name": "G", "nt_code": "G", "nt_id": "///a/39", "linked_nts": [ "///a/38", "///a/40" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 143.787, "beta": 132.894, "gamma": 156.111, "delta": 77.528, "epsilon": -146.012, "zeta": -63.948, "epsilon_zeta": -82.064, "bb_type": "BI", "chi": -178.406, "glyco_bond": "anti", "C5prime_xyz": [ -1.737, 8.631, 1.494 ], "P_xyz": [ -1.146, 10.836, 0.181 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 102.406, "theta": -179.133, "eta_prime": 89.530, "theta_prime": -166.911, "eta_base": 65.103, "theta_base": -127.609, "v0": -0.756, "v1": -23.750, "v2": 37.798, "v3": -39.169, "v4": 25.242, "amplitude": 40.122, "phase_angle": 19.597, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1f", "suiteness": 0.046, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 245.288, 154.852, 293.065 ], "x_axis": [ 0.340, 0.900, -0.274 ], "y_axis": [ -0.143, -0.238, -0.961 ], "z_axis": [ -0.930, 0.365, 0.048 ], "quaternion": [ 0.536, -0.618, -0.306, 0.486 ] } }, { "index": 39, "index_chain": 39, "chain_name": "a", "nt_resnum": 40, "nt_name": "C", "nt_code": "C", "nt_id": "///a/40", "linked_nts": [ "///a/39", "///a/41" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -69.564, "beta": 175.179, "gamma": 65.890, "delta": 75.742, "epsilon": -134.645, "zeta": -98.178, "epsilon_zeta": -36.467, "bb_type": "BI", "chi": -154.709, "glyco_bond": "anti", "C5prime_xyz": [ -1.711, 8.911, 0.183 ], "P_xyz": [ 0.769, 9.684, -0.104 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.402, "theta": -158.188, "eta_prime": -168.055, "theta_prime": -154.643, "eta_base": -120.529, "theta_base": -132.087, "v0": -3.336, "v1": -21.349, "v2": 36.728, "v3": -39.570, "v4": 27.038, "amplitude": 39.979, "phase_angle": 23.263, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.679, "filter_rmsd": 0.060, "frame": { "rmsd": 0.010, "origin": [ 243.091, 158.192, 294.273 ], "x_axis": [ -0.064, 0.636, -0.769 ], "y_axis": [ -0.439, -0.710, -0.551 ], "z_axis": [ -0.896, 0.302, 0.325 ], "quaternion": [ 0.371, -0.575, -0.086, 0.724 ] } }, { "index": 40, "index_chain": 40, "chain_name": "a", "nt_resnum": 41, "nt_name": "G", "nt_code": "G", "nt_id": "///a/41", "linked_nts": [ "///a/40", "///a/42" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -40.134, "beta": 149.432, "gamma": 49.764, "delta": 77.844, "epsilon": -174.530, "zeta": -91.091, "epsilon_zeta": -83.439, "bb_type": "BI", "chi": -155.342, "glyco_bond": "anti", "C5prime_xyz": [ -1.625, 8.839, 0.212 ], "P_xyz": [ 0.899, 9.299, -0.178 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.234, "theta": -145.755, "eta_prime": -176.361, "theta_prime": -154.960, "eta_base": -143.202, "theta_base": -133.503, "v0": -1.251, "v1": -22.550, "v2": 36.481, "v3": -38.209, "v4": 24.950, "amplitude": 38.934, "phase_angle": 20.447, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.239, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 239.878, 160.502, 295.402 ], "x_axis": [ -0.090, 0.208, -0.974 ], "y_axis": [ -0.421, -0.894, -0.152 ], "z_axis": [ -0.903, 0.396, 0.168 ], "quaternion": [ 0.214, -0.640, 0.083, 0.734 ] } }, { "index": 41, "index_chain": 41, "chain_name": "a", "nt_resnum": 42, "nt_name": "G", "nt_code": "G", "nt_id": "///a/42", "linked_nts": [ "///a/41", "///a/43" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem,multiplet", "alpha": 169.053, "beta": -143.706, "gamma": 153.297, "delta": 78.834, "epsilon": -106.083, "zeta": -100.510, "epsilon_zeta": -5.573, "bb_type": "--", "chi": -176.963, "glyco_bond": "anti", "C5prime_xyz": [ -1.050, 8.366, 1.566 ], "P_xyz": [ 1.154, 9.168, 0.451 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.924, "theta": -141.548, "eta_prime": 174.886, "theta_prime": -138.549, "eta_base": -148.643, "theta_base": -108.169, "v0": 6.643, "v1": -29.081, "v2": 39.481, "v3": -36.692, "v4": 18.950, "amplitude": 40.008, "phase_angle": 9.309, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.082, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 237.218, 163.202, 295.709 ], "x_axis": [ -0.209, -0.307, -0.928 ], "y_axis": [ -0.359, -0.859, 0.365 ], "z_axis": [ -0.910, 0.409, 0.069 ], "quaternion": [ 0.017, -0.629, 0.265, 0.731 ] } }, { "index": 42, "index_chain": 42, "chain_name": "a", "nt_resnum": 43, "nt_name": "C", "nt_code": "C", "nt_id": "///a/43", "linked_nts": [ "///a/42", "///a/44" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -32.356, "beta": 145.984, "gamma": 40.450, "delta": 76.975, "epsilon": -157.835, "zeta": -83.929, "epsilon_zeta": -73.906, "bb_type": "BI", "chi": -152.544, "glyco_bond": "anti", "C5prime_xyz": [ -1.710, 8.886, 0.034 ], "P_xyz": [ 0.842, 9.319, -0.156 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.130, "theta": -126.189, "eta_prime": 179.921, "theta_prime": -137.603, "eta_base": -132.531, "theta_base": -122.039, "v0": -3.194, "v1": -21.565, "v2": 36.832, "v3": -39.567, "v4": 26.961, "amplitude": 40.018, "phase_angle": 23.017, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.189, "filter_rmsd": 0.063, "frame": { "rmsd": 0.013, "origin": [ 234.707, 164.571, 293.701 ], "x_axis": [ -0.213, -0.823, -0.527 ], "y_axis": [ -0.395, -0.422, 0.816 ], "z_axis": [ -0.894, 0.382, -0.235 ], "quaternion": [ 0.181, 0.601, -0.506, -0.591 ] } }, { "index": 43, "index_chain": 43, "chain_name": "a", "nt_resnum": 44, "nt_name": "A", "nt_code": "A", "nt_id": "///a/44", "linked_nts": [ "///a/43", "///a/45" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 134.245, "beta": -148.947, "gamma": -161.184, "delta": 81.063, "epsilon": -114.805, "zeta": -76.539, "epsilon_zeta": -38.266, "bb_type": "--", "chi": -169.377, "glyco_bond": "anti", "C5prime_xyz": [ -1.316, 8.480, 1.079 ], "P_xyz": [ -0.317, 10.417, -0.361 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.151, "theta": -162.191, "eta_prime": -174.758, "theta_prime": -155.674, "eta_base": -140.273, "theta_base": -113.168, "v0": 5.030, "v1": -27.371, "v2": 38.137, "v3": -36.248, "v4": 19.779, "amplitude": 38.902, "phase_angle": 11.381, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.277, "filter_rmsd": 0.041, "frame": { "rmsd": 0.021, "origin": [ 232.266, 165.140, 290.524 ], "x_axis": [ -0.356, -0.919, -0.169 ], "y_axis": [ -0.398, -0.015, 0.917 ], "z_axis": [ -0.846, 0.394, -0.360 ], "quaternion": [ -0.259, -0.505, 0.652, 0.503 ] } }, { "index": 44, "index_chain": 44, "chain_name": "a", "nt_resnum": 45, "nt_name": "G", "nt_code": "G", "nt_id": "///a/45", "linked_nts": [ "///a/44", "///a/46" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -83.065, "beta": 142.759, "gamma": 90.893, "delta": 80.456, "epsilon": -143.897, "zeta": -66.929, "epsilon_zeta": -76.969, "bb_type": "BI", "chi": -169.818, "glyco_bond": "anti", "C5prime_xyz": [ -1.523, 8.674, 1.067 ], "P_xyz": [ 0.686, 9.382, -0.103 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.959, "theta": -137.890, "eta_prime": -176.308, "theta_prime": -142.278, "eta_base": -118.860, "theta_base": -106.521, "v0": -0.036, "v1": -23.332, "v2": 36.411, "v3": -37.469, "v4": 23.667, "amplitude": 38.431, "phase_angle": 18.658, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.021, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 229.067, 163.859, 288.586 ], "x_axis": [ -0.417, -0.760, 0.498 ], "y_axis": [ -0.256, 0.624, 0.738 ], "z_axis": [ -0.872, 0.181, -0.454 ], "quaternion": [ -0.434, -0.322, 0.790, 0.291 ] } }, { "index": 45, "index_chain": 45, "chain_name": "a", "nt_resnum": 46, "nt_name": "G", "nt_code": "G", "nt_id": "///a/46", "linked_nts": [ "///a/45", "///a/47" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -93.774, "beta": -176.500, "gamma": 74.706, "delta": 83.520, "epsilon": -148.889, "zeta": -165.711, "epsilon_zeta": 16.821, "bb_type": "--", "chi": -146.788, "glyco_bond": "anti", "C5prime_xyz": [ -1.427, 8.745, -0.280 ], "P_xyz": [ 1.085, 9.105, -0.866 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.800, "theta": 116.392, "eta_prime": -177.569, "theta_prime": 137.153, "eta_base": -124.806, "theta_base": 158.050, "v0": 2.427, "v1": -24.062, "v2": 35.163, "v3": -34.723, "v4": 20.451, "amplitude": 36.377, "phase_angle": 14.846, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.151, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 225.702, 162.422, 287.850 ], "x_axis": [ -0.455, -0.135, 0.880 ], "y_axis": [ -0.143, 0.987, 0.077 ], "z_axis": [ -0.879, -0.090, -0.468 ], "quaternion": [ 0.515, 0.081, -0.853, 0.004 ] } }, { "index": 46, "index_chain": 46, "chain_name": "a", "nt_resnum": 47, "nt_name": "C", "nt_code": "C", "nt_id": "///a/47", "linked_nts": [ "///a/46", "///a/48" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BII,non-stack,canonical,helix", "alpha": -36.957, "beta": -164.046, "gamma": 47.871, "delta": 142.062, "epsilon": -92.201, "zeta": 134.341, "epsilon_zeta": 133.457, "bb_type": "BII", "chi": -115.030, "glyco_bond": "anti", "C5prime_xyz": [ -2.429, 8.527, -1.623 ], "P_xyz": [ -0.589, 10.330, -1.125 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -103.538, "theta": 131.816, "eta_prime": -125.130, "theta_prime": 104.906, "eta_base": -173.492, "theta_base": 91.861, "v0": -28.046, "v1": 39.905, "v2": -35.925, "v3": 20.633, "v4": 4.389, "amplitude": 39.659, "phase_angle": 154.937, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "3b", "suiteness": 0.183, "filter_rmsd": 0.061, "frame": { "rmsd": 0.015, "origin": [ 221.014, 170.316, 274.119 ], "x_axis": [ 0.005, -0.999, -0.052 ], "y_axis": [ 0.001, -0.052, 0.999 ], "z_axis": [ -1.000, -0.005, 0.001 ], "quaternion": [ 0.488, 0.514, -0.485, -0.512 ] } }, { "index": 47, "index_chain": 47, "chain_name": "a", "nt_resnum": 48, "nt_name": "C", "nt_code": "C", "nt_id": "///a/48", "linked_nts": [ "///a/47", "///a/49" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -75.811, "beta": -170.064, "gamma": -87.691, "delta": 144.464, "epsilon": -105.252, "zeta": -75.011, "epsilon_zeta": -30.241, "bb_type": "--", "chi": -146.077, "glyco_bond": "anti", "C5prime_xyz": [ -2.246, 8.838, 0.052 ], "P_xyz": [ -2.344, 11.455, -0.067 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 120.493, "theta": -103.685, "eta_prime": 96.835, "theta_prime": -100.583, "eta_base": 79.914, "theta_base": -80.765, "v0": -27.725, "v1": 40.002, "v2": -36.172, "v3": 21.121, "v4": 3.895, "amplitude": 39.720, "phase_angle": 155.600, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.059, "frame": { "rmsd": 0.009, "origin": [ 231.483, 179.026, 280.288 ], "x_axis": [ 0.491, -0.709, 0.507 ], "y_axis": [ -0.871, -0.410, 0.271 ], "z_axis": [ 0.016, -0.574, -0.818 ], "quaternion": [ 0.256, 0.824, -0.479, 0.159 ] } }, { "index": 48, "index_chain": 48, "chain_name": "a", "nt_resnum": 49, "nt_name": "U", "nt_code": "U", "nt_id": "///a/49", "linked_nts": [ "///a/48", "///a/50" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": -94.774, "beta": -161.265, "gamma": 51.324, "delta": 141.184, "epsilon": -128.182, "zeta": -82.619, "epsilon_zeta": -45.563, "bb_type": "--", "chi": -128.001, "glyco_bond": "anti", "C5prime_xyz": [ -2.147, 8.638, -0.913 ], "P_xyz": [ -0.187, 9.984, 0.204 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 146.006, "theta": -58.016, "eta_prime": -164.036, "theta_prime": -118.231, "eta_base": -135.224, "theta_base": -156.257, "v0": -24.439, "v1": 36.013, "v2": -33.184, "v3": 19.898, "v4": 2.576, "amplitude": 36.022, "phase_angle": 157.105, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "2[", "suiteness": 0.410, "filter_rmsd": 0.099, "frame": { "rmsd": 0.016, "origin": [ 223.523, 171.865, 272.804 ], "x_axis": [ 0.285, -0.510, 0.812 ], "y_axis": [ -0.129, 0.819, 0.560 ], "z_axis": [ -0.950, -0.264, 0.168 ], "quaternion": [ 0.754, 0.273, -0.584, -0.127 ] } }, { "index": 49, "index_chain": 49, "chain_name": "a", "nt_resnum": 50, "nt_name": "A", "nt_code": "A", "nt_id": "///a/50", "linked_nts": [ "///a/49", "///a/51" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-stack", "alpha": 136.915, "beta": -174.655, "gamma": 55.980, "delta": 145.552, "epsilon": -84.976, "zeta": 102.168, "epsilon_zeta": 172.857, "bb_type": "--", "chi": -151.768, "glyco_bond": "anti", "C5prime_xyz": [ -1.823, 8.722, 0.457 ], "P_xyz": [ 0.076, 9.212, 2.207 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 24.283, "theta": 123.892, "eta_prime": 81.440, "theta_prime": 89.588, "eta_base": 85.371, "theta_base": 99.981, "v0": -23.077, "v1": 36.625, "v2": -35.452, "v3": 23.040, "v4": -0.224, "amplitude": 37.377, "phase_angle": 161.533, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "2z", "suiteness": 0.035, "filter_rmsd": 0.041, "frame": { "rmsd": 0.010, "origin": [ 215.700, 174.161, 266.676 ], "x_axis": [ 0.416, 0.481, -0.772 ], "y_axis": [ 0.163, 0.796, 0.584 ], "z_axis": [ 0.895, -0.368, 0.253 ], "quaternion": [ 0.785, 0.303, 0.531, 0.101 ] } }, { "index": 50, "index_chain": 50, "chain_name": "a", "nt_resnum": 51, "nt_name": "A", "nt_code": "A", "nt_id": "///a/51", "linked_nts": [ "///a/50", "///a/52" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": 160.642, "beta": 179.093, "gamma": -51.570, "delta": 152.423, "epsilon": -52.052, "zeta": -26.918, "epsilon_zeta": -25.134, "bb_type": "--", "chi": -115.068, "glyco_bond": "anti", "C5prime_xyz": [ -2.057, 8.391, -1.341 ], "P_xyz": [ -1.663, 10.980, -1.129 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 30.711, "theta": 31.529, "eta_prime": 21.258, "theta_prime": 27.835, "eta_base": -5.321, "theta_base": 35.618, "v0": -22.055, "v1": 38.634, "v2": -39.432, "v3": 27.772, "v4": -3.882, "amplitude": 40.545, "phase_angle": 166.545, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.018, "origin": [ 208.549, 183.529, 282.914 ], "x_axis": [ 0.506, -0.148, 0.850 ], "y_axis": [ 0.703, -0.499, -0.506 ], "z_axis": [ 0.499, 0.854, -0.148 ], "quaternion": [ -0.463, 0.734, 0.189, 0.460 ] } }, { "index": 51, "index_chain": 51, "chain_name": "a", "nt_resnum": 52, "nt_name": "C", "nt_code": "C", "nt_id": "///a/52", "linked_nts": [ "///a/51", "///a/53" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -126.386, "beta": -109.040, "gamma": 7.775, "delta": 78.047, "epsilon": 171.995, "zeta": -88.819, "epsilon_zeta": -99.186, "bb_type": "BI", "chi": -134.602, "glyco_bond": "anti", "C5prime_xyz": [ -2.245, 8.800, -1.083 ], "P_xyz": [ -1.521, 10.956, 0.196 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 93.004, "theta": 175.764, "eta_prime": 96.710, "theta_prime": -178.164, "eta_base": 92.011, "theta_base": -144.663, "v0": -8.306, "v1": -15.754, "v2": 32.138, "v3": -37.742, "v4": 29.175, "amplitude": 37.499, "phase_angle": 31.016, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.061, "frame": { "rmsd": 0.010, "origin": [ 214.019, 170.395, 271.312 ], "x_axis": [ 0.459, -0.220, 0.861 ], "y_axis": [ -0.257, 0.894, 0.366 ], "z_axis": [ -0.850, -0.389, 0.354 ], "quaternion": [ 0.823, 0.229, -0.520, 0.011 ] } }, { "index": 52, "index_chain": 52, "chain_name": "a", "nt_resnum": 53, "nt_name": "A", "nt_code": "A", "nt_id": "///a/53", "linked_nts": [ "///a/52", "///a/54" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 158.481, "beta": -145.101, "gamma": 166.831, "delta": 81.497, "epsilon": -137.601, "zeta": -65.393, "epsilon_zeta": -72.208, "bb_type": "BI", "chi": -179.996, "glyco_bond": "anti", "C5prime_xyz": [ -1.266, 8.311, 1.705 ], "P_xyz": [ 0.749, 9.567, 0.603 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.344, "theta": -114.270, "eta_prime": 176.506, "theta_prime": -127.312, "eta_base": -143.848, "theta_base": -91.648, "v0": 4.895, "v1": -26.396, "v2": 36.757, "v3": -34.849, "v4": 18.888, "amplitude": 37.473, "phase_angle": 11.222, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.387, "filter_rmsd": 0.043, "frame": { "rmsd": 0.016, "origin": [ 210.549, 167.852, 273.291 ], "x_axis": [ 0.445, 0.259, 0.857 ], "y_axis": [ -0.305, 0.944, -0.127 ], "z_axis": [ -0.842, -0.205, 0.499 ], "quaternion": [ 0.850, 0.023, -0.500, 0.166 ] } }, { "index": 53, "index_chain": 53, "chain_name": "a", "nt_resnum": 54, "nt_name": "C", "nt_code": "C", "nt_id": "///a/54", "linked_nts": [ "///a/53", "///a/55" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end,multiplet", "alpha": 164.440, "beta": -167.682, "gamma": 171.732, "delta": 80.346, "epsilon": 179.207, "zeta": -95.773, "epsilon_zeta": -85.020, "bb_type": "BI", "chi": -157.489, "glyco_bond": "anti", "C5prime_xyz": [ -1.439, 8.822, 0.345 ], "P_xyz": [ -0.218, 10.280, -1.455 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.998, "theta": 136.745, "eta_prime": -171.926, "theta_prime": 142.110, "eta_base": -109.877, "theta_base": 152.155, "v0": 0.043, "v1": -23.096, "v2": 35.991, "v3": -36.931, "v4": 23.324, "amplitude": 37.957, "phase_angle": 18.525, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.550, "filter_rmsd": 0.062, "frame": { "rmsd": 0.013, "origin": [ 210.773, 167.057, 277.400 ], "x_axis": [ 0.050, 0.762, 0.646 ], "y_axis": [ -0.813, 0.407, -0.417 ], "z_axis": [ -0.581, -0.504, 0.639 ], "quaternion": [ 0.724, 0.030, -0.424, 0.544 ] } }, { "index": 54, "index_chain": 54, "chain_name": "a", "nt_resnum": 55, "nt_name": "A", "nt_code": "A", "nt_id": "///a/55", "linked_nts": [ "///a/54", "///a/56" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end,multiplet", "alpha": -57.498, "beta": -161.604, "gamma": 44.500, "delta": 78.866, "epsilon": -129.608, "zeta": -67.505, "epsilon_zeta": -62.104, "bb_type": "BI", "chi": -179.212, "glyco_bond": "anti", "C5prime_xyz": [ -1.853, 8.613, 1.545 ], "P_xyz": [ 0.009, 9.192, 3.286 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -167.219, "theta": -131.141, "eta_prime": 176.731, "theta_prime": -121.472, "eta_base": 164.669, "theta_base": -60.294, "v0": -4.597, "v1": -18.806, "v2": 33.622, "v3": -37.183, "v4": 26.389, "amplitude": 37.252, "phase_angle": 25.503, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "&a", "suiteness": 0.774, "filter_rmsd": 0.043, "frame": { "rmsd": 0.012, "origin": [ 208.679, 157.825, 276.419 ], "x_axis": [ 0.645, 0.632, 0.430 ], "y_axis": [ -0.464, 0.771, -0.437 ], "z_axis": [ -0.607, 0.083, 0.790 ], "quaternion": [ 0.895, -0.145, -0.290, 0.306 ] } }, { "index": 55, "index_chain": 55, "chain_name": "a", "nt_resnum": 56, "nt_name": "U", "nt_code": "U", "nt_id": "///a/56", "linked_nts": [ "///a/55", "///a/57" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -62.130, "beta": 159.387, "gamma": 59.486, "delta": 80.781, "epsilon": -153.530, "zeta": -80.498, "epsilon_zeta": -73.032, "bb_type": "BI", "chi": -152.370, "glyco_bond": "anti", "C5prime_xyz": [ -1.679, 8.805, 0.038 ], "P_xyz": [ 0.839, 9.348, -0.410 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.664, "theta": -129.656, "eta_prime": -172.217, "theta_prime": -139.382, "eta_base": -95.506, "theta_base": -114.361, "v0": -1.702, "v1": -20.882, "v2": 34.216, "v3": -36.149, "v4": 23.890, "amplitude": 36.701, "phase_angle": 21.206, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.727, "filter_rmsd": 0.104, "frame": { "rmsd": 0.011, "origin": [ 208.654, 160.441, 279.767 ], "x_axis": [ -0.073, 0.996, 0.043 ], "y_axis": [ -0.903, -0.048, -0.427 ], "z_axis": [ -0.423, -0.070, 0.903 ], "quaternion": [ 0.668, -0.134, -0.175, 0.711 ] } }, { "index": 56, "index_chain": 56, "chain_name": "a", "nt_resnum": 57, "nt_name": "G", "nt_code": "G", "nt_id": "///a/57", "linked_nts": [ "///a/56", "///a/58" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -176.263, "beta": -166.107, "gamma": 144.419, "delta": 79.699, "epsilon": -107.886, "zeta": -94.082, "epsilon_zeta": -13.804, "bb_type": "--", "chi": -179.867, "glyco_bond": "anti", "C5prime_xyz": [ -1.272, 8.423, 1.683 ], "P_xyz": [ 0.940, 9.563, 0.938 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.694, "theta": -148.301, "eta_prime": 170.966, "theta_prime": -144.624, "eta_base": -148.762, "theta_base": -95.523, "v0": 3.542, "v1": -25.950, "v2": 37.331, "v3": -36.274, "v4": 20.689, "amplitude": 38.384, "phase_angle": 13.447, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 207.108, 162.283, 284.179 ], "x_axis": [ -0.297, 0.698, -0.652 ], "y_axis": [ -0.622, -0.659, -0.422 ], "z_axis": [ -0.724, 0.280, 0.630 ], "quaternion": [ 0.411, -0.428, -0.044, 0.804 ] } }, { "index": 57, "index_chain": 57, "chain_name": "a", "nt_resnum": 58, "nt_name": "C", "nt_code": "C", "nt_id": "///a/58", "linked_nts": [ "///a/57", "///a/59" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -59.282, "beta": 140.482, "gamma": 63.261, "delta": 81.657, "epsilon": -153.196, "zeta": -76.810, "epsilon_zeta": -76.386, "bb_type": "BI", "chi": -163.707, "glyco_bond": "anti", "C5prime_xyz": [ -1.262, 8.734, 0.761 ], "P_xyz": [ 1.280, 8.741, 0.100 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.635, "theta": -146.437, "eta_prime": 177.111, "theta_prime": -152.763, "eta_base": -114.913, "theta_base": -142.346, "v0": 2.813, "v1": -25.341, "v2": 36.883, "v3": -36.146, "v4": 21.007, "amplitude": 38.067, "phase_angle": 14.330, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.875, "filter_rmsd": 0.069, "frame": { "rmsd": 0.014, "origin": [ 204.682, 164.406, 284.656 ], "x_axis": [ -0.611, 0.028, -0.791 ], "y_axis": [ -0.407, -0.868, 0.284 ], "z_axis": [ -0.679, 0.495, 0.542 ], "quaternion": [ 0.125, -0.423, 0.224, 0.869 ] } }, { "index": 58, "index_chain": 58, "chain_name": "a", "nt_resnum": 59, "nt_name": "A", "nt_code": "A", "nt_id": "///a/59", "linked_nts": [ "///a/58", "///a/60" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -68.176, "beta": 174.940, "gamma": 67.200, "delta": 78.824, "epsilon": -177.356, "zeta": 139.650, "epsilon_zeta": 42.994, "bb_type": "--", "chi": -176.045, "glyco_bond": "anti", "C5prime_xyz": [ -1.437, 8.533, 1.412 ], "P_xyz": [ 1.099, 9.054, 1.728 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.374, "theta": 19.936, "eta_prime": -171.580, "theta_prime": -57.502, "eta_base": -142.127, "theta_base": -141.249, "v0": 1.496, "v1": -24.988, "v2": 37.689, "v3": -37.779, "v4": 22.864, "amplitude": 39.289, "phase_angle": 16.410, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.661, "filter_rmsd": 0.043, "frame": { "rmsd": 0.014, "origin": [ 202.303, 168.623, 287.307 ], "x_axis": [ -0.648, -0.347, -0.678 ], "y_axis": [ 0.040, -0.904, 0.425 ], "z_axis": [ -0.761, 0.248, 0.600 ], "quaternion": [ -0.109, -0.405, 0.190, 0.888 ] } }, { "index": 59, "index_chain": 59, "chain_name": "a", "nt_resnum": 60, "nt_name": "A", "nt_code": "A", "nt_id": "///a/60", "linked_nts": [ "///a/59", "///a/61" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-stack,non-canonical,helix-end", "alpha": -56.821, "beta": -121.996, "gamma": 89.607, "delta": 144.892, "epsilon": -87.379, "zeta": 146.474, "epsilon_zeta": 126.147, "bb_type": "BII", "chi": -94.688, "glyco_bond": "anti", "C5prime_xyz": [ -2.660, 7.735, -2.371 ], "P_xyz": [ -0.219, 8.518, -2.011 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -56.988, "theta": 164.701, "eta_prime": 37.952, "theta_prime": 139.798, "eta_base": 90.879, "theta_base": 174.832, "v0": -23.926, "v1": 36.799, "v2": -34.926, "v3": 22.055, "v4": 0.892, "amplitude": 37.216, "phase_angle": 159.794, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.042, "frame": { "rmsd": 0.025, "origin": [ 197.807, 170.367, 301.363 ], "x_axis": [ 0.743, 0.669, 0.004 ], "y_axis": [ 0.336, -0.368, -0.867 ], "z_axis": [ -0.578, 0.646, -0.498 ], "quaternion": [ -0.469, 0.808, 0.311, -0.178 ] } }, { "index": 60, "index_chain": 60, "chain_name": "a", "nt_resnum": 61, "nt_name": "G", "nt_code": "G", "nt_id": "///a/61", "linked_nts": [ "///a/60", "///a/62" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -98.927, "beta": 90.439, "gamma": 132.278, "delta": 78.005, "epsilon": -140.539, "zeta": -71.616, "epsilon_zeta": -68.923, "bb_type": "BI", "chi": -164.847, "glyco_bond": "anti", "C5prime_xyz": [ -1.320, 8.749, 0.761 ], "P_xyz": [ -0.994, 9.667, -1.681 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -140.255, "theta": -171.693, "eta_prime": -145.257, "theta_prime": -167.365, "eta_base": -110.283, "theta_base": -125.707, "v0": -0.045, "v1": -23.692, "v2": 37.106, "v3": -38.087, "v4": 24.095, "amplitude": 39.161, "phase_angle": 18.646, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 190.512, 167.698, 301.592 ], "x_axis": [ -0.849, 0.086, -0.521 ], "y_axis": [ 0.391, -0.561, -0.730 ], "z_axis": [ -0.355, -0.824, 0.442 ], "quaternion": [ -0.090, -0.260, -0.460, 0.844 ] } }, { "index": 61, "index_chain": 61, "chain_name": "a", "nt_resnum": 62, "nt_name": "U", "nt_code": "U", "nt_id": "///a/62", "linked_nts": [ "///a/61", "///a/63" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -64.559, "beta": 164.581, "gamma": 64.205, "delta": 82.698, "epsilon": -168.123, "zeta": -85.072, "epsilon_zeta": -83.052, "bb_type": "BI", "chi": -160.328, "glyco_bond": "anti", "C5prime_xyz": [ -1.401, 8.730, 0.540 ], "P_xyz": [ 1.187, 9.059, 0.399 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.763, "theta": -136.633, "eta_prime": -169.003, "theta_prime": -148.563, "eta_base": -110.701, "theta_base": -150.311, "v0": 0.005, "v1": -22.228, "v2": 34.703, "v3": -35.627, "v4": 22.571, "amplitude": 36.617, "phase_angle": 18.610, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.760, "filter_rmsd": 0.106, "frame": { "rmsd": 0.013, "origin": [ 187.223, 165.547, 301.949 ], "x_axis": [ -0.322, -0.223, -0.920 ], "y_axis": [ 0.803, -0.579, -0.141 ], "z_axis": [ -0.502, -0.784, 0.365 ], "quaternion": [ -0.341, -0.472, -0.307, 0.753 ] } }, { "index": 62, "index_chain": 62, "chain_name": "a", "nt_resnum": 63, "nt_name": "C", "nt_code": "C", "nt_id": "///a/63", "linked_nts": [ "///a/62", "///a/64" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 173.185, "beta": -152.276, "gamma": 149.998, "delta": 76.555, "epsilon": -110.883, "zeta": -80.458, "epsilon_zeta": -30.425, "bb_type": "--", "chi": -158.058, "glyco_bond": "anti", "C5prime_xyz": [ -1.540, 8.850, 0.407 ], "P_xyz": [ 0.338, 9.754, -1.115 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.921, "theta": -143.195, "eta_prime": 170.457, "theta_prime": -127.346, "eta_base": -176.327, "theta_base": -122.597, "v0": -1.694, "v1": -22.500, "v2": 36.872, "v3": -38.880, "v4": 25.567, "amplitude": 39.504, "phase_angle": 21.035, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.033, "filter_rmsd": 0.064, "frame": { "rmsd": 0.011, "origin": [ 184.610, 165.149, 303.559 ], "x_axis": [ -0.040, -0.416, -0.909 ], "y_axis": [ 0.660, -0.694, 0.288 ], "z_axis": [ -0.750, -0.588, 0.303 ], "quaternion": [ -0.377, -0.581, -0.105, 0.714 ] } }, { "index": 63, "index_chain": 63, "chain_name": "a", "nt_resnum": 64, "nt_name": "G", "nt_code": "G", "nt_id": "///a/64", "linked_nts": [ "///a/63", "///a/65" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": -69.325, "beta": -128.184, "gamma": 58.375, "delta": 146.620, "epsilon": -102.984, "zeta": 50.022, "epsilon_zeta": 206.994, "bb_type": "--", "chi": -76.358, "glyco_bond": "anti", "C5prime_xyz": [ -3.378, 7.210, -2.766 ], "P_xyz": [ -1.544, 9.035, -3.156 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -141.730, "theta": 88.709, "eta_prime": -132.352, "theta_prime": 54.600, "eta_base": -136.013, "theta_base": 6.884, "v0": -26.687, "v1": 40.293, "v2": -37.650, "v3": 23.302, "v4": 1.900, "amplitude": 40.458, "phase_angle": 158.528, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1[", "suiteness": 0.486, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 179.200, 157.388, 303.723 ], "x_axis": [ 0.433, -0.266, -0.861 ], "y_axis": [ 0.814, -0.294, 0.500 ], "z_axis": [ -0.386, -0.918, 0.090 ], "quaternion": [ 0.554, 0.640, 0.214, -0.487 ] } }, { "index": 64, "index_chain": 64, "chain_name": "a", "nt_resnum": 65, "nt_name": "A", "nt_code": "A", "nt_id": "///a/65", "linked_nts": [ "///a/64", "///a/66" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,BII,non-stack", "alpha": -175.742, "beta": -128.072, "gamma": -65.551, "delta": 140.419, "epsilon": -125.428, "zeta": -166.940, "epsilon_zeta": 41.512, "bb_type": "BII", "chi": 74.335, "glyco_bond": "syn", "C5prime_xyz": [ -4.755, 4.088, 1.961 ], "P_xyz": [ -6.807, 3.617, 3.485 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 24.785, "theta": 125.355, "eta_prime": 25.911, "theta_prime": 163.510, "eta_base": 66.065, "theta_base": -76.589, "v0": -11.200, "v1": 22.929, "v2": -25.196, "v3": 19.494, "v4": -5.366, "amplitude": 25.376, "phase_angle": 173.184, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.052, "frame": { "rmsd": 0.024, "origin": [ 189.803, 157.028, 317.601 ], "x_axis": [ 0.345, 0.010, 0.939 ], "y_axis": [ -0.817, 0.495, 0.295 ], "z_axis": [ -0.462, -0.869, 0.179 ], "quaternion": [ 0.710, 0.410, -0.493, 0.291 ] } }, { "index": 65, "index_chain": 65, "chain_name": "a", "nt_resnum": 66, "nt_name": "G", "nt_code": "G", "nt_id": "///a/66", "linked_nts": [ "///a/65", "///a/67" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end", "alpha": 139.094, "beta": 145.021, "gamma": -46.758, "delta": 87.635, "epsilon": -150.379, "zeta": -63.750, "epsilon_zeta": -86.630, "bb_type": "BI", "chi": -171.244, "glyco_bond": "anti", "C5prime_xyz": [ -0.849, 8.358, 1.136 ], "P_xyz": [ 0.887, 9.037, 2.947 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -62.559, "theta": -154.167, "eta_prime": -98.734, "theta_prime": -143.862, "eta_base": 153.535, "theta_base": -119.348, "v0": 11.266, "v1": -30.787, "v2": 37.597, "v3": -31.922, "v4": 13.184, "amplitude": 37.610, "phase_angle": 1.511, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 179.443, 163.984, 304.368 ], "x_axis": [ 0.774, -0.543, -0.325 ], "y_axis": [ 0.412, 0.043, 0.910 ], "z_axis": [ -0.480, -0.839, 0.257 ], "quaternion": [ 0.720, 0.607, -0.054, -0.332 ] } }, { "index": 66, "index_chain": 66, "chain_name": "a", "nt_resnum": 67, "nt_name": "C", "nt_code": "C", "nt_id": "///a/67", "linked_nts": [ "///a/66", "///a/68" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -79.296, "beta": -176.537, "gamma": 64.220, "delta": 79.544, "epsilon": -171.964, "zeta": -89.235, "epsilon_zeta": -82.730, "bb_type": "BI", "chi": -154.631, "glyco_bond": "anti", "C5prime_xyz": [ -1.617, 8.873, 0.158 ], "P_xyz": [ 0.887, 9.589, 0.091 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.568, "theta": -143.391, "eta_prime": -175.292, "theta_prime": -151.950, "eta_base": -145.412, "theta_base": -143.580, "v0": -1.878, "v1": -21.413, "v2": 35.167, "v3": -37.136, "v4": 24.607, "amplitude": 37.747, "phase_angle": 21.305, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.645, "filter_rmsd": 0.064, "frame": { "rmsd": 0.012, "origin": [ 177.749, 161.357, 302.680 ], "x_axis": [ 0.884, -0.451, 0.126 ], "y_axis": [ -0.089, 0.102, 0.991 ], "z_axis": [ -0.459, -0.887, 0.050 ], "quaternion": [ 0.713, 0.658, -0.205, -0.127 ] } }, { "index": 67, "index_chain": 67, "chain_name": "a", "nt_resnum": 68, "nt_name": "G", "nt_code": "G", "nt_id": "///a/68", "linked_nts": [ "///a/67", "///a/69" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": 148.387, "beta": -145.290, "gamma": -172.261, "delta": 80.290, "epsilon": -114.859, "zeta": -58.441, "epsilon_zeta": -56.417, "bb_type": "--", "chi": -168.625, "glyco_bond": "anti", "C5prime_xyz": [ -1.166, 8.569, 0.991 ], "P_xyz": [ 0.034, 10.178, -0.685 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -179.625, "theta": -136.906, "eta_prime": -172.406, "theta_prime": -133.940, "eta_base": -149.953, "theta_base": -80.599, "v0": 5.185, "v1": -27.789, "v2": 38.605, "v3": -36.641, "v4": 19.858, "amplitude": 39.355, "phase_angle": 11.200, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.563, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 176.345, 157.876, 300.384 ], "x_axis": [ 0.654, -0.641, 0.403 ], "y_axis": [ -0.425, 0.129, 0.896 ], "z_axis": [ -0.626, -0.757, -0.188 ], "quaternion": [ 0.631, 0.654, -0.407, -0.085 ] } }, { "index": 68, "index_chain": 68, "chain_name": "a", "nt_resnum": 69, "nt_name": "G", "nt_code": "G", "nt_id": "///a/69", "linked_nts": [ "///a/68", "///a/70" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -94.023, "beta": 151.627, "gamma": 91.185, "delta": 79.247, "epsilon": -136.338, "zeta": -117.175, "epsilon_zeta": -19.163, "bb_type": "--", "chi": -174.333, "glyco_bond": "anti", "C5prime_xyz": [ -1.449, 8.556, 1.319 ], "P_xyz": [ 0.862, 9.329, 0.379 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 149.467, "theta": -153.567, "eta_prime": -177.702, "theta_prime": -147.373, "eta_base": -98.817, "theta_base": -139.262, "v0": 3.493, "v1": -26.945, "v2": 38.888, "v3": -37.807, "v4": 21.628, "amplitude": 40.013, "phase_angle": 13.619, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 177.536, 153.591, 303.191 ], "x_axis": [ 0.113, -0.037, 0.993 ], "y_axis": [ -0.915, 0.385, 0.119 ], "z_axis": [ -0.387, -0.922, 0.010 ], "quaternion": [ 0.614, 0.424, -0.562, 0.358 ] } }, { "index": 69, "index_chain": 69, "chain_name": "a", "nt_resnum": 70, "nt_name": "A", "nt_code": "A", "nt_id": "///a/70", "linked_nts": [ "///a/69", "///a/71" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 10.859, "beta": 127.408, "gamma": 34.574, "delta": 144.114, "epsilon": -165.546, "zeta": -109.852, "epsilon_zeta": -55.694, "bb_type": "BI", "chi": -133.450, "glyco_bond": "anti", "C5prime_xyz": [ -2.579, 8.700, -0.558 ], "P_xyz": [ -0.212, 9.328, 0.417 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.722, "theta": -92.838, "eta_prime": -151.113, "theta_prime": -138.690, "eta_base": -132.642, "theta_base": -97.998, "v0": -28.920, "v1": 42.241, "v2": -38.439, "v3": 22.625, "v4": 3.572, "amplitude": 42.002, "phase_angle": 156.228, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.035, "frame": { "rmsd": 0.015, "origin": [ 178.394, 150.360, 303.401 ], "x_axis": [ -0.145, 0.408, 0.901 ], "y_axis": [ -0.946, 0.211, -0.248 ], "z_axis": [ -0.291, -0.888, 0.355 ], "quaternion": [ 0.596, 0.269, -0.500, 0.568 ] } }, { "index": 70, "index_chain": 70, "chain_name": "a", "nt_resnum": 71, "nt_name": "U", "nt_code": "U", "nt_id": "///a/71", "linked_nts": [ "///a/70", "///a/72" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": 139.501, "beta": -173.548, "gamma": 171.934, "delta": 79.296, "epsilon": -107.405, "zeta": -18.007, "epsilon_zeta": -89.399, "bb_type": "--", "chi": -160.746, "glyco_bond": "anti", "C5prime_xyz": [ -1.784, 8.872, 0.492 ], "P_xyz": [ -0.646, 10.618, -1.115 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 145.549, "theta": -119.910, "eta_prime": 156.386, "theta_prime": -124.222, "eta_base": -141.842, "theta_base": -91.911, "v0": -5.490, "v1": -17.934, "v2": 33.208, "v3": -37.270, "v4": 26.956, "amplitude": 37.227, "phase_angle": 26.869, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.104, "frame": { "rmsd": 0.009, "origin": [ 178.371, 147.535, 306.460 ], "x_axis": [ -0.785, 0.321, 0.530 ], "y_axis": [ -0.585, -0.100, -0.805 ], "z_axis": [ -0.205, -0.942, 0.267 ], "quaternion": [ 0.309, 0.111, -0.595, 0.733 ] } }, { "index": 71, "index_chain": 71, "chain_name": "a", "nt_resnum": 72, "nt_name": "A", "nt_code": "A", "nt_id": "///a/72", "linked_nts": [ "///a/71", "///a/73" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -112.481, "beta": 85.679, "gamma": 174.300, "delta": 83.281, "epsilon": -147.038, "zeta": -127.664, "epsilon_zeta": -19.374, "bb_type": "--", "chi": -166.362, "glyco_bond": "anti", "C5prime_xyz": [ -1.746, 8.733, 0.833 ], "P_xyz": [ -2.483, 10.483, -0.976 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -168.182, "theta": 114.045, "eta_prime": -157.968, "theta_prime": 127.833, "eta_base": -111.529, "theta_base": 136.913, "v0": -3.776, "v1": -18.082, "v2": 31.575, "v3": -34.726, "v4": 24.363, "amplitude": 34.767, "phase_angle": 24.742, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.037, "frame": { "rmsd": 0.010, "origin": [ 174.344, 146.624, 308.990 ], "x_axis": [ -0.927, 0.375, 0.001 ], "y_axis": [ -0.176, -0.434, -0.884 ], "z_axis": [ -0.331, -0.819, 0.468 ], "quaternion": [ 0.164, -0.098, -0.506, 0.841 ] } }, { "index": 72, "index_chain": 72, "chain_name": "a", "nt_resnum": 73, "nt_name": "A", "nt_code": "A", "nt_id": "///a/73", "linked_nts": [ "///a/72", "///a/74" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": 64.644, "beta": -156.703, "gamma": -91.473, "delta": 84.225, "epsilon": -131.573, "zeta": -63.894, "epsilon_zeta": -67.679, "bb_type": "BI", "chi": -168.279, "glyco_bond": "anti", "C5prime_xyz": [ -0.970, 8.298, 1.007 ], "P_xyz": [ -0.177, 10.737, 1.436 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.345, "theta": -167.720, "eta_prime": 167.295, "theta_prime": -150.468, "eta_base": 161.951, "theta_base": -93.163, "v0": 12.217, "v1": -32.389, "v2": 39.379, "v3": -33.332, "v4": 13.394, "amplitude": 39.385, "phase_angle": 1.002, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.036, "frame": { "rmsd": 0.012, "origin": [ 181.293, 140.795, 313.487 ], "x_axis": [ -0.793, 0.401, 0.459 ], "y_axis": [ -0.529, -0.079, -0.845 ], "z_axis": [ -0.303, -0.913, 0.274 ], "quaternion": [ 0.317, 0.053, -0.600, 0.732 ] } }, { "index": 73, "index_chain": 73, "chain_name": "a", "nt_resnum": 74, "nt_name": "A", "nt_code": "A", "nt_id": "///a/74", "linked_nts": [ "///a/73", "///a/75" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -65.572, "beta": 163.820, "gamma": 69.742, "delta": 79.905, "epsilon": -114.540, "zeta": -59.813, "epsilon_zeta": -54.727, "bb_type": "--", "chi": -164.534, "glyco_bond": "anti", "C5prime_xyz": [ -1.170, 8.595, 0.791 ], "P_xyz": [ 1.394, 8.834, 0.297 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.501, "theta": -106.447, "eta_prime": -161.002, "theta_prime": -99.857, "eta_base": -97.842, "theta_base": -53.573, "v0": 5.599, "v1": -28.132, "v2": 38.818, "v3": -36.590, "v4": 19.589, "amplitude": 39.498, "phase_angle": 10.642, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.500, "filter_rmsd": 0.039, "frame": { "rmsd": 0.007, "origin": [ 177.274, 139.590, 315.829 ], "x_axis": [ -0.925, 0.125, -0.359 ], "y_axis": [ 0.255, -0.495, -0.831 ], "z_axis": [ -0.282, -0.860, 0.425 ], "quaternion": [ -0.038, -0.190, -0.501, 0.843 ] } }, { "index": 74, "index_chain": 74, "chain_name": "a", "nt_resnum": 75, "nt_name": "G", "nt_code": "G", "nt_id": "///a/75", "linked_nts": [ "///a/74", "///a/76" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -63.735, "beta": 149.102, "gamma": 69.445, "delta": 80.293, "epsilon": -145.411, "zeta": -73.296, "epsilon_zeta": -72.115, "bb_type": "BI", "chi": -173.382, "glyco_bond": "anti", "C5prime_xyz": [ -1.293, 8.470, 1.298 ], "P_xyz": [ 1.229, 8.699, 0.601 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.009, "theta": -139.991, "eta_prime": -165.973, "theta_prime": -144.132, "eta_base": -83.313, "theta_base": -119.006, "v0": 6.665, "v1": -29.167, "v2": 39.542, "v3": -36.596, "v4": 18.886, "amplitude": 40.054, "phase_angle": 9.172, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.229, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 172.536, 136.468, 311.813 ], "x_axis": [ -0.013, -0.373, -0.928 ], "y_axis": [ 0.890, -0.428, 0.159 ], "z_axis": [ -0.456, -0.823, 0.337 ], "quaternion": [ -0.473, -0.519, -0.249, 0.667 ] } }, { "index": 75, "index_chain": 75, "chain_name": "a", "nt_resnum": 76, "nt_name": "G", "nt_code": "G", "nt_id": "///a/76", "linked_nts": [ "///a/75", "///a/77" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -63.988, "beta": -172.653, "gamma": 42.997, "delta": 79.255, "epsilon": -104.598, "zeta": -27.596, "epsilon_zeta": -77.003, "bb_type": "--", "chi": -172.243, "glyco_bond": "anti", "C5prime_xyz": [ -1.120, 8.450, 1.261 ], "P_xyz": [ 1.334, 8.524, 2.176 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.147, "theta": -99.272, "eta_prime": -177.683, "theta_prime": -108.649, "eta_base": -140.294, "theta_base": -102.124, "v0": 7.667, "v1": -29.885, "v2": 39.734, "v3": -36.373, "v4": 18.080, "amplitude": 40.112, "phase_angle": 7.868, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.759, "filter_rmsd": 0.008, "frame": { "rmsd": 0.008, "origin": [ 169.647, 133.846, 311.407 ], "x_axis": [ 0.683, -0.275, -0.677 ], "y_axis": [ 0.693, -0.050, 0.719 ], "z_axis": [ -0.232, -0.960, 0.156 ], "quaternion": [ 0.669, 0.628, 0.166, -0.362 ] } }, { "index": 76, "index_chain": 76, "chain_name": "a", "nt_resnum": 77, "nt_name": "G", "nt_code": "G", "nt_id": "///a/77", "linked_nts": [ "///a/76", "///a/78" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -108.706, "beta": 79.843, "gamma": -179.189, "delta": 79.109, "epsilon": -117.240, "zeta": -107.280, "epsilon_zeta": -9.960, "bb_type": "--", "chi": 179.176, "glyco_bond": "anti", "C5prime_xyz": [ -1.278, 8.372, 1.719 ], "P_xyz": [ -2.034, 10.698, 0.760 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -175.894, "theta": 137.925, "eta_prime": -169.900, "theta_prime": 161.101, "eta_base": -145.678, "theta_base": -159.670, "v0": 6.121, "v1": -28.837, "v2": 39.352, "v3": -36.874, "v4": 19.365, "amplitude": 39.954, "phase_angle": 9.966, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 168.656, 130.830, 308.474 ], "x_axis": [ 0.840, -0.218, -0.497 ], "y_axis": [ 0.493, -0.079, 0.867 ], "z_axis": [ -0.228, -0.973, 0.041 ], "quaternion": [ 0.671, 0.685, 0.100, -0.265 ] } }, { "index": 77, "index_chain": 77, "chain_name": "a", "nt_resnum": 78, "nt_name": "A", "nt_code": "A", "nt_id": "///a/78", "linked_nts": [ "///a/77", "///a/79" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -52.481, "beta": 135.621, "gamma": 60.285, "delta": 80.629, "epsilon": -122.088, "zeta": -88.731, "epsilon_zeta": -33.357, "bb_type": "--", "chi": -171.674, "glyco_bond": "anti", "C5prime_xyz": [ -1.224, 8.464, 1.195 ], "P_xyz": [ 1.307, 8.359, 0.528 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.038, "theta": -131.435, "eta_prime": 178.695, "theta_prime": -133.384, "eta_base": -143.018, "theta_base": -90.587, "v0": 6.547, "v1": -28.824, "v2": 38.996, "v3": -36.238, "v4": 18.734, "amplitude": 39.513, "phase_angle": 9.275, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.754, "filter_rmsd": 0.035, "frame": { "rmsd": 0.010, "origin": [ 167.627, 128.186, 307.504 ], "x_axis": [ 0.960, -0.279, 0.018 ], "y_axis": [ -0.054, -0.119, 0.991 ], "z_axis": [ -0.275, -0.953, -0.130 ], "quaternion": [ 0.654, 0.743, -0.112, -0.086 ] } }, { "index": 78, "index_chain": 78, "chain_name": "a", "nt_resnum": 79, "nt_name": "G", "nt_code": "G", "nt_id": "///a/79", "linked_nts": [ "///a/78", "///a/80" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -54.943, "beta": 146.287, "gamma": 58.443, "delta": 83.618, "epsilon": -118.599, "zeta": -102.271, "epsilon_zeta": -16.328, "bb_type": "--", "chi": -171.981, "glyco_bond": "anti", "C5prime_xyz": [ -1.156, 8.474, 1.232 ], "P_xyz": [ 1.443, 8.377, 0.830 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.378, "theta": -141.488, "eta_prime": -175.586, "theta_prime": -141.031, "eta_base": -109.826, "theta_base": -110.638, "v0": 7.368, "v1": -28.230, "v2": 37.219, "v3": -33.922, "v4": 16.769, "amplitude": 37.541, "phase_angle": 7.506, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.392, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 169.154, 124.706, 307.338 ], "x_axis": [ 0.626, -0.189, 0.757 ], "y_axis": [ -0.770, 0.004, 0.638 ], "z_axis": [ -0.124, -0.982, -0.143 ], "quaternion": [ 0.610, 0.664, -0.361, 0.238 ] } }, { "index": 79, "index_chain": 79, "chain_name": "a", "nt_resnum": 80, "nt_name": "C", "nt_code": "C", "nt_id": "///a/80", "linked_nts": [ "///a/79", "///a/81" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -52.831, "beta": 135.089, "gamma": 63.384, "delta": 84.384, "epsilon": -167.298, "zeta": -86.804, "epsilon_zeta": -80.495, "bb_type": "BI", "chi": -154.603, "glyco_bond": "anti", "C5prime_xyz": [ -1.422, 8.764, 0.188 ], "P_xyz": [ 1.022, 8.606, -0.781 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.249, "theta": -116.110, "eta_prime": -178.649, "theta_prime": -119.315, "eta_base": -125.962, "theta_base": -51.865, "v0": 2.627, "v1": -23.337, "v2": 33.962, "v3": -33.366, "v4": 19.447, "amplitude": 35.065, "phase_angle": 14.406, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.866, "filter_rmsd": 0.070, "frame": { "rmsd": 0.010, "origin": [ 169.854, 122.453, 307.353 ], "x_axis": [ 0.132, -0.223, 0.966 ], "y_axis": [ -0.961, -0.268, 0.069 ], "z_axis": [ 0.244, -0.937, -0.250 ], "quaternion": [ 0.392, 0.642, -0.461, 0.471 ] } }, { "index": 80, "index_chain": 80, "chain_name": "a", "nt_resnum": 81, "nt_name": "U", "nt_code": "U", "nt_id": "///a/81", "linked_nts": [ "///a/80", "///a/82" ], "nt_type": "RNA", "dbn": ".", "summary": "BI,non-canonical", "alpha": 171.585, "beta": -120.773, "gamma": 164.293, "delta": 146.714, "epsilon": -158.115, "zeta": -106.817, "epsilon_zeta": -51.299, "bb_type": "BI", "chi": -88.711, "glyco_bond": "--", "C5prime_xyz": [ -2.751, 7.626, -2.516 ], "P_xyz": [ -1.045, 6.542, -4.189 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.259, "theta": -144.426, "eta_prime": -128.862, "theta_prime": 152.273, "eta_base": -55.900, "theta_base": 163.612, "v0": -22.322, "v1": 36.507, "v2": -35.970, "v3": 24.001, "v4": -1.336, "amplitude": 37.580, "phase_angle": 163.167, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "1t", "suiteness": 0.199, "filter_rmsd": 0.103, "frame": { "rmsd": 0.007, "origin": [ 167.945, 120.013, 309.586 ], "x_axis": [ -0.401, -0.526, 0.750 ], "y_axis": [ -0.173, -0.760, -0.626 ], "z_axis": [ 0.900, -0.381, 0.213 ], "quaternion": [ -0.115, 0.535, -0.327, 0.770 ] } }, { "index": 81, "index_chain": 81, "chain_name": "a", "nt_resnum": 82, "nt_name": "U", "nt_code": "U", "nt_id": "///a/82", "linked_nts": [ "///a/81", "///a/83" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -136.117, "beta": 88.794, "gamma": 157.628, "delta": 146.683, "epsilon": -165.786, "zeta": -107.822, "epsilon_zeta": -57.964, "bb_type": "BI", "chi": -168.144, "glyco_bond": "anti", "C5prime_xyz": [ -2.143, 8.565, 1.297 ], "P_xyz": [ -0.741, 10.198, -0.231 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -119.265, "theta": 91.899, "eta_prime": -165.939, "theta_prime": 99.835, "eta_base": -162.593, "theta_base": 40.099, "v0": -23.500, "v1": 38.611, "v2": -38.022, "v3": 25.374, "v4": -1.501, "amplitude": 39.709, "phase_angle": 163.243, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.105, "frame": { "rmsd": 0.006, "origin": [ 173.991, 121.545, 308.678 ], "x_axis": [ -0.662, -0.341, 0.668 ], "y_axis": [ -0.398, -0.595, -0.698 ], "z_axis": [ 0.635, -0.728, 0.258 ], "quaternion": [ 0.018, 0.411, -0.450, 0.793 ] } }, { "index": 82, "index_chain": 82, "chain_name": "a", "nt_resnum": 83, "nt_name": "G", "nt_code": "G", "nt_id": "///a/83", "linked_nts": [ "///a/82", "///a/84" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix-end,stem-end", "alpha": -96.114, "beta": 67.020, "gamma": 148.189, "delta": 78.530, "epsilon": -156.656, "zeta": -73.823, "epsilon_zeta": -82.834, "bb_type": "BI", "chi": -124.640, "glyco_bond": "anti", "C5prime_xyz": [ -2.275, 8.512, -1.566 ], "P_xyz": [ -3.528, 7.755, -3.785 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -171.145, "theta": 146.075, "eta_prime": 157.963, "theta_prime": 158.351, "eta_base": 100.803, "theta_base": -179.475, "v0": -3.813, "v1": -20.442, "v2": 35.286, "v3": -38.302, "v4": 26.605, "amplitude": 38.616, "phase_angle": 23.967, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 169.247, 121.577, 306.043 ], "x_axis": [ 0.318, 0.386, 0.866 ], "y_axis": [ 0.818, 0.349, -0.456 ], "z_axis": [ -0.478, 0.854, -0.205 ], "quaternion": [ 0.605, -0.542, -0.556, -0.179 ] } }, { "index": 83, "index_chain": 83, "chain_name": "a", "nt_resnum": 84, "nt_name": "C", "nt_code": "C", "nt_id": "///a/84", "linked_nts": [ "///a/83", "///a/85" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -97.501, "beta": 153.174, "gamma": 87.835, "delta": 81.668, "epsilon": -148.161, "zeta": -74.651, "epsilon_zeta": -73.510, "bb_type": "BI", "chi": -145.268, "glyco_bond": "anti", "C5prime_xyz": [ -1.548, 8.777, -0.357 ], "P_xyz": [ 0.483, 8.961, -2.025 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.309, "theta": -145.558, "eta_prime": 169.382, "theta_prime": -153.036, "eta_base": -157.112, "theta_base": -130.807, "v0": 3.623, "v1": -25.467, "v2": 36.444, "v3": -35.200, "v4": 19.993, "amplitude": 37.418, "phase_angle": 13.101, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.070, "frame": { "rmsd": 0.011, "origin": [ 168.352, 124.221, 305.962 ], "x_axis": [ 0.703, 0.233, 0.671 ], "y_axis": [ 0.545, 0.429, -0.720 ], "z_axis": [ -0.456, 0.873, 0.174 ], "quaternion": [ 0.759, -0.525, -0.371, -0.103 ] } }, { "index": 84, "index_chain": 84, "chain_name": "a", "nt_resnum": 85, "nt_name": "U", "nt_code": "U", "nt_id": "///a/85", "linked_nts": [ "///a/84", "///a/86" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -62.406, "beta": 169.479, "gamma": 52.026, "delta": 75.783, "epsilon": -103.142, "zeta": -115.702, "epsilon_zeta": 12.560, "bb_type": "--", "chi": -159.891, "glyco_bond": "anti", "C5prime_xyz": [ -1.511, 8.758, 0.517 ], "P_xyz": [ 1.053, 9.275, 0.554 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.314, "theta": -152.198, "eta_prime": -177.524, "theta_prime": -145.297, "eta_base": -143.050, "theta_base": -113.475, "v0": 1.863, "v1": -25.669, "v2": 38.637, "v3": -38.557, "v4": 23.079, "amplitude": 40.195, "phase_angle": 16.003, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.910, "filter_rmsd": 0.110, "frame": { "rmsd": 0.009, "origin": [ 167.618, 127.557, 308.016 ], "x_axis": [ 0.993, 0.060, 0.104 ], "y_axis": [ 0.085, 0.267, -0.960 ], "z_axis": [ -0.086, 0.962, 0.260 ], "quaternion": [ 0.794, -0.605, -0.060, -0.008 ] } }, { "index": 85, "index_chain": 85, "chain_name": "a", "nt_resnum": 86, "nt_name": "C", "nt_code": "C", "nt_id": "///a/86", "linked_nts": [ "///a/85", "///a/87" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -50.407, "beta": 119.884, "gamma": 65.355, "delta": 76.707, "epsilon": -139.961, "zeta": -90.142, "epsilon_zeta": -49.819, "bb_type": "BI", "chi": -158.530, "glyco_bond": "anti", "C5prime_xyz": [ -1.515, 8.861, 0.415 ], "P_xyz": [ 0.758, 8.712, -0.851 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.799, "theta": -144.408, "eta_prime": 173.469, "theta_prime": -151.487, "eta_base": -143.978, "theta_base": -129.335, "v0": 0.419, "v1": -24.816, "v2": 38.617, "v3": -39.257, "v4": 24.468, "amplitude": 40.591, "phase_angle": 17.944, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.441, "filter_rmsd": 0.067, "frame": { "rmsd": 0.007, "origin": [ 168.462, 130.399, 308.889 ], "x_axis": [ 0.910, -0.033, -0.413 ], "y_axis": [ -0.356, 0.449, -0.820 ], "z_axis": [ 0.212, 0.893, 0.397 ], "quaternion": [ 0.830, -0.516, 0.188, 0.097 ] } }, { "index": 86, "index_chain": 86, "chain_name": "a", "nt_resnum": 87, "nt_name": "C", "nt_code": "C", "nt_id": "///a/87", "linked_nts": [ "///a/86", "///a/88" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -46.094, "beta": 155.223, "gamma": 49.570, "delta": 71.635, "epsilon": 71.794, "zeta": 84.024, "epsilon_zeta": -12.230, "bb_type": "--", "chi": -158.443, "glyco_bond": "anti", "C5prime_xyz": [ -1.460, 8.762, 0.434 ], "P_xyz": [ 1.131, 8.983, 0.228 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -167.362, "theta": -101.986, "eta_prime": -152.214, "theta_prime": -120.594, "eta_base": -116.165, "theta_base": -85.701, "v0": 4.462, "v1": -27.152, "v2": 38.643, "v3": -37.031, "v4": 20.578, "amplitude": 39.555, "phase_angle": 12.330, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.431, "filter_rmsd": 0.067, "frame": { "rmsd": 0.010, "origin": [ 170.496, 132.918, 310.293 ], "x_axis": [ 0.548, 0.066, -0.834 ], "y_axis": [ -0.738, 0.507, -0.445 ], "z_axis": [ 0.393, 0.859, 0.327 ], "quaternion": [ 0.772, -0.423, 0.398, 0.260 ] } }, { "index": 87, "index_chain": 87, "chain_name": "a", "nt_resnum": 88, "nt_name": "U", "nt_code": "U", "nt_id": "///a/88", "linked_nts": [ "///a/87", "///a/89" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 64.361, "beta": -149.133, "gamma": 171.966, "delta": 81.706, "epsilon": -100.195, "zeta": -142.717, "epsilon_zeta": 42.522, "bb_type": "--", "chi": -158.339, "glyco_bond": "anti", "C5prime_xyz": [ -1.525, 8.733, 0.439 ], "P_xyz": [ -0.040, 9.885, -1.377 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 139.363, "theta": -157.283, "eta_prime": 168.993, "theta_prime": -161.922, "eta_base": -135.681, "theta_base": -125.724, "v0": 2.193, "v1": -23.893, "v2": 35.351, "v3": -35.014, "v4": 20.751, "amplitude": 36.642, "phase_angle": 15.258, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.103, "frame": { "rmsd": 0.008, "origin": [ 172.728, 136.193, 309.723 ], "x_axis": [ -0.100, 0.254, -0.962 ], "y_axis": [ -0.867, 0.452, 0.210 ], "z_axis": [ 0.488, 0.855, 0.175 ], "quaternion": [ 0.618, -0.261, 0.587, 0.454 ] } }, { "index": 88, "index_chain": 88, "chain_name": "a", "nt_resnum": 89, "nt_name": "G", "nt_code": "G", "nt_id": "///a/89", "linked_nts": [ "///a/88", "///a/90" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": 101.154, "beta": -100.061, "gamma": 170.321, "delta": 83.401, "epsilon": -99.807, "zeta": -101.879, "epsilon_zeta": 2.072, "bb_type": "--", "chi": -171.497, "glyco_bond": "anti", "C5prime_xyz": [ -0.946, 8.431, 1.197 ], "P_xyz": [ 0.491, 8.758, -0.977 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 151.003, "theta": -140.748, "eta_prime": 168.877, "theta_prime": -142.229, "eta_base": -142.204, "theta_base": -97.623, "v0": 8.824, "v1": -29.583, "v2": 38.017, "v3": -33.759, "v4": 15.880, "amplitude": 38.192, "phase_angle": 5.483, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 173.671, 139.156, 309.221 ], "x_axis": [ -0.607, 0.266, -0.749 ], "y_axis": [ -0.589, 0.481, 0.649 ], "z_axis": [ 0.533, 0.835, -0.136 ], "quaternion": [ 0.430, -0.108, 0.746, 0.498 ] } }, { "index": 89, "index_chain": 89, "chain_name": "a", "nt_resnum": 90, "nt_name": "G", "nt_code": "G", "nt_id": "///a/90", "linked_nts": [ "///a/89", "///a/91" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,helix", "alpha": -50.782, "beta": 118.918, "gamma": 75.417, "delta": 88.141, "epsilon": -106.625, "zeta": -169.613, "epsilon_zeta": 62.988, "bb_type": "BII", "chi": -164.480, "glyco_bond": "anti", "C5prime_xyz": [ -1.704, 8.657, 0.769 ], "P_xyz": [ 0.630, 8.562, -0.452 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.708, "theta": 167.506, "eta_prime": -163.235, "theta_prime": 167.624, "eta_base": -98.433, "theta_base": 173.698, "v0": 0.536, "v1": -20.916, "v2": 32.156, "v3": -32.580, "v4": 20.335, "amplitude": 33.742, "phase_angle": 17.637, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.486, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 173.008, 142.366, 307.371 ], "x_axis": [ -0.860, 0.494, -0.127 ], "y_axis": [ 0.107, 0.418, 0.902 ], "z_axis": [ 0.499, 0.762, -0.412 ], "quaternion": [ 0.191, 0.183, 0.820, 0.507 ] } }, { "index": 90, "index_chain": 90, "chain_name": "a", "nt_resnum": 91, "nt_name": "A", "nt_code": "A", "nt_id": "///a/91", "linked_nts": [ "///a/90", "///a/92" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -40.930, "beta": 117.313, "gamma": 46.918, "delta": 80.060, "epsilon": -145.068, "zeta": -78.976, "epsilon_zeta": -66.091, "bb_type": "BI", "chi": -161.161, "glyco_bond": "anti", "C5prime_xyz": [ -1.420, 8.771, 0.578 ], "P_xyz": [ 1.136, 8.387, 0.232 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.686, "theta": -99.824, "eta_prime": -179.899, "theta_prime": -113.910, "eta_base": -176.701, "theta_base": -88.558, "v0": -0.614, "v1": -21.806, "v2": 34.664, "v3": -36.004, "v4": 23.090, "amplitude": 36.787, "phase_angle": 19.558, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "7a", "suiteness": 0.035, "filter_rmsd": 0.039, "frame": { "rmsd": 0.009, "origin": [ 179.826, 143.348, 305.693 ], "x_axis": [ -0.813, 0.537, -0.223 ], "y_axis": [ -0.021, 0.355, 0.935 ], "z_axis": [ 0.581, 0.765, -0.278 ], "quaternion": [ 0.257, 0.165, 0.782, 0.543 ] } }, { "index": 91, "index_chain": 91, "chain_name": "a", "nt_resnum": 92, "nt_name": "U", "nt_code": "U", "nt_id": "///a/92", "linked_nts": [ "///a/91", "///a/93" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": 125.982, "beta": -139.754, "gamma": -157.420, "delta": 81.448, "epsilon": -118.959, "zeta": -66.832, "epsilon_zeta": -52.127, "bb_type": "--", "chi": -169.989, "glyco_bond": "anti", "C5prime_xyz": [ -1.347, 8.611, 1.121 ], "P_xyz": [ -0.252, 10.458, -0.364 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.404, "theta": -152.017, "eta_prime": -165.215, "theta_prime": -143.314, "eta_base": -109.268, "theta_base": -85.748, "v0": 1.488, "v1": -23.815, "v2": 35.894, "v3": -35.970, "v4": 21.706, "amplitude": 37.404, "phase_angle": 16.333, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.079, "filter_rmsd": 0.109, "frame": { "rmsd": 0.009, "origin": [ 178.717, 147.103, 303.422 ], "x_axis": [ -0.609, 0.716, 0.342 ], "y_axis": [ 0.572, 0.097, 0.815 ], "z_axis": [ 0.550, 0.691, -0.469 ], "quaternion": [ 0.071, 0.437, 0.737, 0.511 ] } }, { "index": 92, "index_chain": 92, "chain_name": "a", "nt_resnum": 93, "nt_name": "U", "nt_code": "U", "nt_id": "///a/93", "linked_nts": [ "///a/92", "///a/94" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -68.066, "beta": 153.403, "gamma": 68.754, "delta": 78.337, "epsilon": -129.961, "zeta": -90.093, "epsilon_zeta": -39.868, "bb_type": "--", "chi": -155.346, "glyco_bond": "anti", "C5prime_xyz": [ -1.683, 8.796, 0.229 ], "P_xyz": [ 0.713, 9.332, -0.658 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.288, "theta": -149.865, "eta_prime": -173.610, "theta_prime": -144.353, "eta_base": -99.760, "theta_base": -170.969, "v0": -0.736, "v1": -22.855, "v2": 36.427, "v3": -37.874, "v4": 24.343, "amplitude": 38.687, "phase_angle": 19.680, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.341, "filter_rmsd": 0.103, "frame": { "rmsd": 0.006, "origin": [ 178.362, 151.396, 304.357 ], "x_axis": [ 0.049, 0.521, 0.852 ], "y_axis": [ 0.960, -0.259, 0.104 ], "z_axis": [ 0.275, 0.813, -0.513 ], "quaternion": [ -0.263, 0.675, 0.549, 0.418 ] } }, { "index": 93, "index_chain": 93, "chain_name": "a", "nt_resnum": 94, "nt_name": "C", "nt_code": "C", "nt_id": "///a/94", "linked_nts": [ "///a/93", "///a/95" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -68.370, "beta": 171.382, "gamma": 66.391, "delta": 141.929, "epsilon": -146.843, "zeta": -146.792, "epsilon_zeta": -0.051, "bb_type": "--", "chi": -100.102, "glyco_bond": "anti", "C5prime_xyz": [ -2.808, 8.104, -2.132 ], "P_xyz": [ -0.498, 9.067, -2.885 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.660, "theta": -174.434, "eta_prime": -162.546, "theta_prime": 163.122, "eta_base": 174.564, "theta_base": -159.026, "v0": -27.972, "v1": 39.304, "v2": -34.903, "v3": 19.720, "v4": 4.949, "amplitude": 38.849, "phase_angle": 153.951, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.596, "filter_rmsd": 0.061, "frame": { "rmsd": 0.010, "origin": [ 177.630, 153.244, 302.020 ], "x_axis": [ 0.059, -0.002, 0.998 ], "y_axis": [ 0.991, 0.124, -0.058 ], "z_axis": [ -0.124, 0.992, 0.009 ], "quaternion": [ 0.546, -0.481, -0.514, -0.454 ] } }, { "index": 94, "index_chain": 94, "chain_name": "a", "nt_resnum": 95, "nt_name": "A", "nt_code": "A", "nt_id": "///a/95", "linked_nts": [ "///a/94", "///a/96" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -113.214, "beta": 155.695, "gamma": 59.784, "delta": 79.616, "epsilon": -141.153, "zeta": -63.871, "epsilon_zeta": -77.282, "bb_type": "BI", "chi": -179.888, "glyco_bond": "anti", "C5prime_xyz": [ -1.101, 8.287, 1.627 ], "P_xyz": [ 1.520, 8.380, 1.466 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 141.367, "theta": -129.040, "eta_prime": 134.727, "theta_prime": -129.338, "eta_base": -175.674, "theta_base": -101.221, "v0": 7.577, "v1": -29.945, "v2": 39.787, "v3": -36.359, "v4": 18.146, "amplitude": 40.168, "phase_angle": 7.895, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.044, "frame": { "rmsd": 0.015, "origin": [ 177.120, 157.501, 299.669 ], "x_axis": [ 0.522, -0.252, 0.815 ], "y_axis": [ 0.772, -0.267, -0.577 ], "z_axis": [ 0.363, 0.930, 0.055 ], "quaternion": [ 0.572, -0.658, -0.197, -0.448 ] } }, { "index": 95, "index_chain": 95, "chain_name": "a", "nt_resnum": 96, "nt_name": "G", "nt_code": "G", "nt_id": "///a/96", "linked_nts": [ "///a/95", "///a/97" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -71.357, "beta": -175.610, "gamma": 61.494, "delta": 80.297, "epsilon": -143.589, "zeta": -80.906, "epsilon_zeta": -62.682, "bb_type": "BI", "chi": -178.559, "glyco_bond": "anti", "C5prime_xyz": [ -1.397, 8.507, 1.568 ], "P_xyz": [ 1.080, 8.751, 2.389 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.075, "theta": -150.648, "eta_prime": -169.462, "theta_prime": -146.781, "eta_base": -120.242, "theta_base": -126.916, "v0": 0.314, "v1": -23.000, "v2": 35.633, "v3": -36.431, "v4": 22.788, "amplitude": 37.494, "phase_angle": 18.128, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.824, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 178.619, 160.840, 302.776 ], "x_axis": [ 0.819, -0.547, 0.176 ], "y_axis": [ 0.125, -0.129, -0.984 ], "z_axis": [ 0.561, 0.827, -0.037 ], "quaternion": [ 0.643, -0.704, 0.150, -0.261 ] } }, { "index": 96, "index_chain": 96, "chain_name": "a", "nt_resnum": 97, "nt_name": "C", "nt_code": "C", "nt_id": "///a/97", "linked_nts": [ "///a/96", "///a/98" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -65.420, "beta": 161.411, "gamma": 70.501, "delta": 78.885, "epsilon": -141.211, "zeta": -32.415, "epsilon_zeta": -108.796, "bb_type": "--", "chi": -167.080, "glyco_bond": "anti", "C5prime_xyz": [ -1.343, 8.739, 0.932 ], "P_xyz": [ 1.201, 9.171, 0.594 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.558, "theta": -103.768, "eta_prime": -171.033, "theta_prime": -116.011, "eta_base": -139.645, "theta_base": -81.930, "v0": 0.533, "v1": -24.671, "v2": 38.210, "v3": -38.813, "v4": 24.085, "amplitude": 40.125, "phase_angle": 17.772, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.498, "filter_rmsd": 0.069, "frame": { "rmsd": 0.011, "origin": [ 180.153, 164.057, 304.816 ], "x_axis": [ 0.889, -0.350, -0.295 ], "y_axis": [ -0.248, 0.173, -0.953 ], "z_axis": [ 0.384, 0.921, 0.067 ], "quaternion": [ 0.730, -0.642, 0.233, -0.035 ] } }, { "index": 97, "index_chain": 97, "chain_name": "a", "nt_resnum": 98, "nt_name": "G", "nt_code": "G", "nt_id": "///a/98", "linked_nts": [ "///a/97", "///a/99" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -153.413, "beta": 143.344, "gamma": 145.844, "delta": 80.363, "epsilon": -124.224, "zeta": -85.400, "epsilon_zeta": -38.823, "bb_type": "--", "chi": -178.536, "glyco_bond": "anti", "C5prime_xyz": [ -1.230, 8.375, 1.599 ], "P_xyz": [ 0.048, 10.304, 0.409 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.608, "theta": -168.778, "eta_prime": -178.017, "theta_prime": -161.710, "eta_base": -114.689, "theta_base": -129.978, "v0": 5.011, "v1": -27.700, "v2": 38.815, "v3": -36.943, "v4": 20.104, "amplitude": 39.612, "phase_angle": 11.514, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 184.975, 165.175, 304.210 ], "x_axis": [ 0.410, -0.243, -0.879 ], "y_axis": [ -0.737, 0.479, -0.477 ], "z_axis": [ 0.537, 0.843, 0.017 ], "quaternion": [ 0.690, -0.478, 0.513, 0.179 ] } }, { "index": 98, "index_chain": 98, "chain_name": "a", "nt_resnum": 99, "nt_name": "G", "nt_code": "G", "nt_id": "///a/99", "linked_nts": [ "///a/98", "///a/100" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -48.074, "beta": 166.813, "gamma": 45.017, "delta": 80.060, "epsilon": -147.011, "zeta": -75.675, "epsilon_zeta": -71.336, "bb_type": "BI", "chi": -158.706, "glyco_bond": "anti", "C5prime_xyz": [ -1.250, 8.843, 0.445 ], "P_xyz": [ 1.293, 9.299, 0.811 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.522, "theta": -116.888, "eta_prime": -177.248, "theta_prime": -126.498, "eta_base": -138.102, "theta_base": -101.089, "v0": -1.653, "v1": -20.971, "v2": 34.354, "v3": -36.258, "v4": 24.005, "amplitude": 36.840, "phase_angle": 21.169, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.485, "filter_rmsd": 0.022, "frame": { "rmsd": 0.022, "origin": [ 188.347, 166.522, 303.872 ], "x_axis": [ -0.225, -0.055, -0.973 ], "y_axis": [ -0.757, 0.638, 0.139 ], "z_axis": [ 0.613, 0.768, -0.186 ], "quaternion": [ 0.554, -0.284, 0.716, 0.317 ] } }, { "index": 99, "index_chain": 99, "chain_name": "a", "nt_resnum": 100, "nt_name": "C", "nt_code": "C", "nt_id": "///a/100", "linked_nts": [ "///a/99", "///a/101" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 110.445, "beta": -159.180, "gamma": -144.569, "delta": 82.574, "epsilon": -125.536, "zeta": -66.954, "epsilon_zeta": -58.582, "bb_type": "--", "chi": -171.138, "glyco_bond": "anti", "C5prime_xyz": [ -1.004, 8.423, 1.269 ], "P_xyz": [ 0.117, 10.640, 0.562 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.064, "theta": -161.947, "eta_prime": 176.456, "theta_prime": -152.181, "eta_base": -135.874, "theta_base": -109.826, "v0": 7.573, "v1": -29.180, "v2": 38.787, "v3": -35.350, "v4": 17.510, "amplitude": 39.139, "phase_angle": 7.684, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.073, "frame": { "rmsd": 0.017, "origin": [ 190.896, 167.791, 300.725 ], "x_axis": [ -0.681, 0.154, -0.716 ], "y_axis": [ -0.496, 0.622, 0.606 ], "z_axis": [ 0.538, 0.768, -0.348 ], "quaternion": [ 0.385, -0.105, 0.814, 0.422 ] } }, { "index": 100, "index_chain": 100, "chain_name": "a", "nt_resnum": 101, "nt_name": "G", "nt_code": "G", "nt_id": "///a/101", "linked_nts": [ "///a/100", "///a/102" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -65.742, "beta": 159.352, "gamma": 68.252, "delta": 74.996, "epsilon": -142.942, "zeta": -40.853, "epsilon_zeta": -102.089, "bb_type": "BI", "chi": -166.268, "glyco_bond": "anti", "C5prime_xyz": [ -1.822, 8.835, 0.820 ], "P_xyz": [ 0.596, 9.704, 0.515 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.285, "theta": -122.467, "eta_prime": -173.519, "theta_prime": -134.149, "eta_base": -118.043, "theta_base": -76.080, "v0": -2.837, "v1": -22.993, "v2": 38.715, "v3": -41.377, "v4": 27.916, "amplitude": 41.878, "phase_angle": 22.411, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.461, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 191.151, 169.514, 297.379 ], "x_axis": [ -0.879, 0.441, -0.183 ], "y_axis": [ 0.089, 0.528, 0.845 ], "z_axis": [ 0.468, 0.726, -0.503 ], "quaternion": [ 0.191, 0.155, 0.853, 0.461 ] } }, { "index": 101, "index_chain": 101, "chain_name": "a", "nt_resnum": 102, "nt_name": "G", "nt_code": "G", "nt_id": "///a/102", "linked_nts": [ "///a/101", "///a/103" ], "nt_type": "RNA", "dbn": ".", "summary": "syn", "alpha": -145.674, "beta": 133.168, "gamma": 153.106, "delta": 77.531, "epsilon": -138.458, "zeta": 82.778, "epsilon_zeta": 138.764, "bb_type": "--", "chi": -1.627, "glyco_bond": "syn", "C5prime_xyz": [ -4.912, 4.035, -2.000 ], "P_xyz": [ -7.119, 2.946, -1.150 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.893, "theta": 5.820, "eta_prime": -178.229, "theta_prime": -29.142, "eta_base": -91.847, "theta_base": -51.865, "v0": 6.482, "v1": -30.492, "v2": 41.699, "v3": -39.001, "v4": 20.438, "amplitude": 42.333, "phase_angle": 9.929, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1f", "suiteness": 0.010, "filter_rmsd": 0.032, "frame": { "rmsd": 0.032, "origin": [ 190.262, 175.717, 297.053 ], "x_axis": [ -0.520, -0.054, -0.853 ], "y_axis": [ 0.679, -0.632, -0.374 ], "z_axis": [ -0.519, -0.773, 0.365 ], "quaternion": [ -0.231, -0.432, -0.361, 0.793 ] } }, { "index": 102, "index_chain": 102, "chain_name": "a", "nt_resnum": 103, "nt_name": "A", "nt_code": "A", "nt_id": "///a/103", "linked_nts": [ "///a/102", "///a/104" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-canonical,helix-end", "alpha": 52.933, "beta": 139.259, "gamma": 164.270, "delta": 147.645, "epsilon": -90.688, "zeta": -44.574, "epsilon_zeta": -46.114, "bb_type": "--", "chi": 58.778, "glyco_bond": "syn", "C5prime_xyz": [ -5.371, 4.124, 1.218 ], "P_xyz": [ -6.031, 3.020, 3.480 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 108.960, "theta": -88.251, "eta_prime": 126.698, "theta_prime": -73.468, "eta_base": -179.426, "theta_base": -23.315, "v0": -23.519, "v1": 37.692, "v2": -36.731, "v3": 24.110, "v4": -0.614, "amplitude": 38.597, "phase_angle": 162.112, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "5q", "suiteness": 0.489, "filter_rmsd": 0.048, "frame": { "rmsd": 0.019, "origin": [ 192.337, 178.493, 299.300 ], "x_axis": [ -0.694, 0.719, 0.029 ], "y_axis": [ 0.699, 0.683, -0.209 ], "z_axis": [ -0.170, -0.125, -0.977 ], "quaternion": [ -0.054, 0.387, 0.916, -0.091 ] } }, { "index": 103, "index_chain": 103, "chain_name": "a", "nt_resnum": 104, "nt_name": "C", "nt_code": "C", "nt_id": "///a/104", "linked_nts": [ "///a/103", "///a/105" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BI", "alpha": -80.811, "beta": -177.306, "gamma": 61.016, "delta": 79.404, "epsilon": -141.098, "zeta": -57.744, "epsilon_zeta": -83.354, "bb_type": "BI", "chi": 7.944, "glyco_bond": "syn", "C5prime_xyz": [ -5.527, 4.491, -1.206 ], "P_xyz": [ -5.883, 1.978, -1.833 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 144.604, "theta": -127.880, "eta_prime": -169.184, "theta_prime": -123.833, "eta_base": -140.126, "theta_base": -141.686, "v0": -0.851, "v1": -22.590, "v2": 36.135, "v3": -37.624, "v4": 24.262, "amplitude": 38.418, "phase_angle": 19.849, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.463, "filter_rmsd": 0.076, "frame": { "rmsd": 0.022, "origin": [ 200.329, 173.971, 296.085 ], "x_axis": [ 0.106, -0.980, -0.167 ], "y_axis": [ 0.465, -0.099, 0.879 ], "z_axis": [ -0.879, -0.171, 0.446 ], "quaternion": [ 0.603, 0.436, -0.295, -0.600 ] } }, { "index": 104, "index_chain": 104, "chain_name": "a", "nt_resnum": 105, "nt_name": "G", "nt_code": "G", "nt_id": "///a/105", "linked_nts": [ "///a/104", "///a/106" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -81.326, "beta": 170.713, "gamma": 72.292, "delta": 79.785, "epsilon": -143.799, "zeta": -60.454, "epsilon_zeta": -83.345, "bb_type": "BI", "chi": -156.888, "glyco_bond": "anti", "C5prime_xyz": [ -1.343, 8.788, 0.302 ], "P_xyz": [ 1.160, 9.237, -0.251 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.646, "theta": -109.396, "eta_prime": -170.306, "theta_prime": -118.651, "eta_base": -169.557, "theta_base": -79.161, "v0": 1.417, "v1": -25.073, "v2": 37.897, "v3": -38.077, "v4": 23.182, "amplitude": 39.545, "phase_angle": 16.599, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.362, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 203.486, 171.450, 294.296 ], "x_axis": [ -0.276, 0.815, -0.510 ], "y_axis": [ 0.431, 0.579, 0.692 ], "z_axis": [ 0.859, -0.029, -0.511 ], "quaternion": [ 0.445, 0.405, 0.769, 0.215 ] } }, { "index": 105, "index_chain": 105, "chain_name": "a", "nt_resnum": 106, "nt_name": "G", "nt_code": "G", "nt_id": "///a/106", "linked_nts": [ "///a/105", "///a/107" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -170.839, "beta": -173.774, "gamma": 136.474, "delta": 81.181, "epsilon": -123.221, "zeta": -78.422, "epsilon_zeta": -44.798, "bb_type": "--", "chi": 179.795, "glyco_bond": "anti", "C5prime_xyz": [ -0.869, 8.167, 1.701 ], "P_xyz": [ 1.373, 9.147, 0.850 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 146.904, "theta": -141.985, "eta_prime": 173.199, "theta_prime": -139.255, "eta_base": -120.745, "theta_base": -116.213, "v0": 9.555, "v1": -31.067, "v2": 39.847, "v3": -35.341, "v4": 16.259, "amplitude": 40.007, "phase_angle": 5.115, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.024, "frame": { "rmsd": 0.024, "origin": [ 206.000, 176.065, 291.226 ], "x_axis": [ -0.176, 0.806, 0.565 ], "y_axis": [ 0.509, -0.417, 0.753 ], "z_axis": [ 0.843, 0.420, -0.337 ], "quaternion": [ 0.133, 0.628, 0.523, 0.560 ] } }, { "index": 106, "index_chain": 106, "chain_name": "a", "nt_resnum": 107, "nt_name": "G", "nt_code": "G", "nt_id": "///a/107", "linked_nts": [ "///a/106", "///a/108" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -49.781, "beta": 174.030, "gamma": 52.938, "delta": 80.585, "epsilon": -138.873, "zeta": -84.377, "epsilon_zeta": -54.497, "bb_type": "BI", "chi": -166.673, "glyco_bond": "anti", "C5prime_xyz": [ -1.493, 8.726, 0.877 ], "P_xyz": [ 1.006, 9.276, 1.321 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 179.589, "theta": -149.407, "eta_prime": -165.276, "theta_prime": -145.246, "eta_base": -129.682, "theta_base": -121.938, "v0": -1.747, "v1": -21.426, "v2": 35.013, "v3": -36.982, "v4": 24.520, "amplitude": 37.558, "phase_angle": 21.212, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.559, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 208.123, 180.256, 289.534 ], "x_axis": [ 0.035, 0.343, 0.939 ], "y_axis": [ 0.470, -0.835, 0.287 ], "z_axis": [ 0.882, 0.431, -0.191 ], "quaternion": [ -0.050, 0.718, 0.283, 0.634 ] } }, { "index": 107, "index_chain": 107, "chain_name": "a", "nt_resnum": 108, "nt_name": "U", "nt_code": "U", "nt_id": "///a/108", "linked_nts": [ "///a/107", "///a/109" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -58.995, "beta": 158.281, "gamma": 60.942, "delta": 82.046, "epsilon": -149.458, "zeta": -75.524, "epsilon_zeta": -73.934, "bb_type": "BI", "chi": -141.706, "glyco_bond": "anti", "C5prime_xyz": [ -1.815, 8.729, -0.609 ], "P_xyz": [ 0.615, 9.190, -1.417 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.520, "theta": -146.400, "eta_prime": -173.791, "theta_prime": -141.940, "eta_base": -140.447, "theta_base": -116.211, "v0": -2.546, "v1": -20.048, "v2": 33.659, "v3": -36.059, "v4": 24.420, "amplitude": 36.440, "phase_angle": 22.532, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.739, "filter_rmsd": 0.103, "frame": { "rmsd": 0.019, "origin": [ 209.752, 182.470, 289.248 ], "x_axis": [ 0.336, 0.001, 0.942 ], "y_axis": [ 0.688, -0.683, -0.245 ], "z_axis": [ 0.643, 0.731, -0.230 ], "quaternion": [ -0.325, 0.750, 0.230, 0.528 ] } }, { "index": 108, "index_chain": 108, "chain_name": "a", "nt_resnum": 109, "nt_name": "G", "nt_code": "G", "nt_id": "///a/109", "linked_nts": [ "///a/108", "///a/110" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -67.224, "beta": 165.894, "gamma": 84.414, "delta": 141.053, "epsilon": -139.786, "zeta": 160.929, "epsilon_zeta": 59.285, "bb_type": "BII", "chi": -135.227, "glyco_bond": "anti", "C5prime_xyz": [ -1.839, 8.797, -0.539 ], "P_xyz": [ 0.714, 9.297, -0.587 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -169.555, "theta": 142.829, "eta_prime": -137.097, "theta_prime": 118.577, "eta_base": -108.869, "theta_base": 125.138, "v0": -24.980, "v1": 35.897, "v2": -32.511, "v3": 18.926, "v4": 3.631, "amplitude": 35.726, "phase_angle": 155.508, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.143, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 213.545, 185.415, 290.218 ], "x_axis": [ 0.349, -0.645, 0.680 ], "y_axis": [ 0.396, -0.556, -0.731 ], "z_axis": [ 0.849, 0.524, 0.062 ], "quaternion": [ -0.462, 0.679, -0.092, 0.563 ] } }, { "index": 109, "index_chain": 109, "chain_name": "a", "nt_resnum": 110, "nt_name": "A", "nt_code": "A", "nt_id": "///a/110", "linked_nts": [ "///a/109", "///a/111" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -70.129, "beta": 146.531, "gamma": 23.136, "delta": 80.144, "epsilon": -136.644, "zeta": -67.332, "epsilon_zeta": -69.312, "bb_type": "BI", "chi": -177.548, "glyco_bond": "anti", "C5prime_xyz": [ -1.649, 8.524, 1.496 ], "P_xyz": [ 0.683, 8.627, 2.668 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.593, "theta": -128.614, "eta_prime": 144.628, "theta_prime": -122.875, "eta_base": 148.829, "theta_base": -81.357, "v0": -0.672, "v1": -22.469, "v2": 35.694, "v3": -37.064, "v4": 23.767, "amplitude": 37.881, "phase_angle": 19.561, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.130, "filter_rmsd": 0.044, "frame": { "rmsd": 0.021, "origin": [ 208.524, 188.001, 285.152 ], "x_axis": [ 0.474, -0.305, 0.826 ], "y_axis": [ 0.679, -0.470, -0.563 ], "z_axis": [ 0.560, 0.828, -0.016 ], "quaternion": [ -0.497, 0.700, 0.134, 0.495 ] } }, { "index": 110, "index_chain": 110, "chain_name": "a", "nt_resnum": 111, "nt_name": "G", "nt_code": "G", "nt_id": "///a/111", "linked_nts": [ "///a/110", "///a/112" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -66.723, "beta": 163.657, "gamma": 68.377, "delta": 82.773, "epsilon": -132.530, "zeta": -76.553, "epsilon_zeta": -55.977, "bb_type": "BI", "chi": -167.826, "glyco_bond": "anti", "C5prime_xyz": [ -1.627, 8.710, 0.982 ], "P_xyz": [ 0.941, 9.232, 0.967 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.796, "theta": -134.376, "eta_prime": -164.632, "theta_prime": -133.535, "eta_base": -104.990, "theta_base": -92.454, "v0": -0.438, "v1": -20.889, "v2": 33.027, "v3": -34.173, "v4": 21.821, "amplitude": 34.988, "phase_angle": 19.273, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.591, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 211.648, 190.639, 287.529 ], "x_axis": [ 0.865, -0.483, 0.136 ], "y_axis": [ 0.087, -0.122, -0.989 ], "z_axis": [ 0.494, 0.867, -0.064 ], "quaternion": [ 0.648, -0.716, 0.138, -0.220 ] } }, { "index": 111, "index_chain": 111, "chain_name": "a", "nt_resnum": 112, "nt_name": "U", "nt_code": "U", "nt_id": "///a/112", "linked_nts": [ "///a/111", "///a/113" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -65.588, "beta": 160.988, "gamma": 61.356, "delta": 82.349, "epsilon": -121.765, "zeta": -74.245, "epsilon_zeta": -47.520, "bb_type": "--", "chi": -159.786, "glyco_bond": "anti", "C5prime_xyz": [ -1.488, 8.735, 0.507 ], "P_xyz": [ 1.096, 9.126, 0.253 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.201, "theta": -128.543, "eta_prime": -173.650, "theta_prime": -120.807, "eta_base": -116.812, "theta_base": -112.751, "v0": 1.640, "v1": -23.877, "v2": 35.769, "v3": -35.740, "v4": 21.498, "amplitude": 37.224, "phase_angle": 16.075, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.759, "filter_rmsd": 0.107, "frame": { "rmsd": 0.012, "origin": [ 215.333, 192.605, 287.628 ], "x_axis": [ 0.632, -0.485, -0.605 ], "y_axis": [ -0.510, 0.327, -0.795 ], "z_axis": [ 0.584, 0.811, -0.041 ], "quaternion": [ 0.693, -0.580, 0.429, 0.009 ] } }, { "index": 112, "index_chain": 112, "chain_name": "a", "nt_resnum": 113, "nt_name": "A", "nt_code": "A", "nt_id": "///a/113", "linked_nts": [ "///a/112", "///a/114" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix-end", "alpha": -53.009, "beta": -145.928, "gamma": 61.866, "delta": 144.908, "epsilon": -121.562, "zeta": 92.962, "epsilon_zeta": 145.476, "bb_type": "--", "chi": -88.541, "glyco_bond": "anti", "C5prime_xyz": [ -3.186, 7.612, -2.484 ], "P_xyz": [ -1.272, 9.354, -2.840 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -141.232, "theta": 84.603, "eta_prime": -121.940, "theta_prime": 76.616, "eta_base": -121.517, "theta_base": 62.229, "v0": -28.125, "v1": 40.770, "v2": -37.001, "v3": 21.797, "v4": 3.740, "amplitude": 40.520, "phase_angle": 155.943, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1[", "suiteness": 0.715, "filter_rmsd": 0.040, "frame": { "rmsd": 0.018, "origin": [ 221.447, 198.067, 285.506 ], "x_axis": [ 0.289, -0.428, -0.856 ], "y_axis": [ -0.797, 0.387, -0.463 ], "z_axis": [ 0.530, 0.817, -0.229 ], "quaternion": [ 0.602, -0.532, 0.576, 0.154 ] } }, { "index": 113, "index_chain": 113, "chain_name": "a", "nt_resnum": 114, "nt_name": "A", "nt_code": "A", "nt_id": "///a/114", "linked_nts": [ "///a/113", "///a/115" ], "nt_type": "RNA", "dbn": ".", "summary": "", "alpha": -97.779, "beta": 145.413, "gamma": 65.425, "delta": 146.104, "epsilon": -110.749, "zeta": -133.071, "epsilon_zeta": 22.322, "bb_type": "--", "chi": -76.463, "glyco_bond": "--", "C5prime_xyz": [ -3.371, 7.070, -2.804 ], "P_xyz": [ -1.175, 7.090, -4.239 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.562, "theta": -98.711, "eta_prime": -159.983, "theta_prime": -122.999, "eta_base": 170.454, "theta_base": -93.044, "v0": -25.424, "v1": 38.887, "v2": -36.742, "v3": 23.013, "v4": 1.258, "amplitude": 39.258, "phase_angle": 159.377, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "0b", "suiteness": 0.556, "filter_rmsd": 0.038, "frame": { "rmsd": 0.019, "origin": [ 215.676, 196.762, 288.457 ], "x_axis": [ 0.971, 0.082, 0.222 ], "y_axis": [ -0.151, 0.938, 0.312 ], "z_axis": [ -0.183, -0.337, 0.924 ], "quaternion": [ 0.979, 0.166, -0.104, 0.059 ] } }, { "index": 114, "index_chain": 114, "chain_name": "a", "nt_resnum": 115, "nt_name": "U", "nt_code": "U", "nt_id": "///a/115", "linked_nts": [ "///a/114", "///a/116" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BII,non-stack,non-canonical,multiplet", "alpha": 77.757, "beta": -113.828, "gamma": -109.164, "delta": 153.017, "epsilon": -95.479, "zeta": 155.417, "epsilon_zeta": 109.105, "bb_type": "BII", "chi": -168.605, "glyco_bond": "anti", "C5prime_xyz": [ -1.924, 8.403, 1.466 ], "P_xyz": [ -0.948, 10.779, 0.942 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -101.387, "theta": 79.960, "eta_prime": -93.556, "theta_prime": 89.110, "eta_base": -72.478, "theta_base": 80.599, "v0": -19.136, "v1": 36.283, "v2": -38.560, "v3": 28.508, "v4": -6.116, "amplitude": 39.148, "phase_angle": 170.062, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.110, "frame": { "rmsd": 0.011, "origin": [ 214.870, 205.620, 299.298 ], "x_axis": [ 0.408, 0.833, -0.375 ], "y_axis": [ -0.472, -0.159, -0.867 ], "z_axis": [ -0.781, 0.531, 0.328 ], "quaternion": [ 0.628, -0.556, -0.162, 0.519 ] } }, { "index": 115, "index_chain": 115, "chain_name": "a", "nt_resnum": 116, "nt_name": "G", "nt_code": "G", "nt_id": "///a/116", "linked_nts": [ "///a/115", "///a/117" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,canonical,helix-end,stem-end", "alpha": 171.129, "beta": 155.787, "gamma": 71.580, "delta": 84.423, "epsilon": -116.057, "zeta": -96.506, "epsilon_zeta": -19.552, "bb_type": "--", "chi": 179.629, "glyco_bond": "anti", "C5prime_xyz": [ -1.221, 8.322, 1.709 ], "P_xyz": [ 1.393, 8.442, 1.468 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 119.423, "theta": -127.358, "eta_prime": 109.333, "theta_prime": -123.651, "eta_base": 110.462, "theta_base": -74.868, "v0": 6.620, "v1": -28.066, "v2": 37.587, "v3": -34.681, "v4": 17.741, "amplitude": 38.026, "phase_angle": 8.716, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "4g", "suiteness": 0.066, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 216.883, 199.444, 292.723 ], "x_axis": [ -0.119, 0.958, 0.262 ], "y_axis": [ -0.989, -0.138, 0.053 ], "z_axis": [ 0.087, -0.253, 0.963 ], "quaternion": [ 0.653, 0.117, -0.067, 0.745 ] } }, { "index": 116, "index_chain": 116, "chain_name": "a", "nt_resnum": 117, "nt_name": "C", "nt_code": "C", "nt_id": "///a/117", "linked_nts": [ "///a/116", "///a/118" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -29.345, "beta": 139.871, "gamma": 46.495, "delta": 80.342, "epsilon": -145.102, "zeta": -61.193, "epsilon_zeta": -83.908, "bb_type": "BI", "chi": -138.900, "glyco_bond": "anti", "C5prime_xyz": [ -1.699, 8.755, -0.753 ], "P_xyz": [ 0.833, 8.764, -1.417 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.007, "theta": -122.674, "eta_prime": -168.239, "theta_prime": -137.098, "eta_base": -99.230, "theta_base": -123.882, "v0": -1.001, "v1": -22.256, "v2": 35.609, "v3": -37.154, "v4": 24.069, "amplitude": 37.903, "phase_angle": 20.037, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.313, "filter_rmsd": 0.069, "frame": { "rmsd": 0.016, "origin": [ 216.641, 201.220, 295.663 ], "x_axis": [ -0.718, 0.526, 0.455 ], "y_axis": [ -0.477, -0.849, 0.229 ], "z_axis": [ 0.507, -0.052, 0.860 ], "quaternion": [ 0.271, 0.260, 0.048, 0.926 ] } }, { "index": 117, "index_chain": 117, "chain_name": "a", "nt_resnum": 118, "nt_name": "C", "nt_code": "C", "nt_id": "///a/118", "linked_nts": [ "///a/117", "///a/119" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem,multiplet", "alpha": -147.768, "beta": 154.176, "gamma": 130.593, "delta": 81.972, "epsilon": -120.803, "zeta": -80.591, "epsilon_zeta": -40.212, "bb_type": "--", "chi": -167.254, "glyco_bond": "anti", "C5prime_xyz": [ -1.110, 8.616, 1.019 ], "P_xyz": [ 0.656, 9.882, -0.391 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.288, "theta": -150.668, "eta_prime": 167.654, "theta_prime": -148.127, "eta_base": -161.149, "theta_base": -115.133, "v0": 3.730, "v1": -25.750, "v2": 36.887, "v3": -35.687, "v4": 20.129, "amplitude": 37.866, "phase_angle": 13.061, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.077, "frame": { "rmsd": 0.020, "origin": [ 217.632, 202.346, 299.906 ], "x_axis": [ -0.992, 0.103, -0.077 ], "y_axis": [ -0.105, -0.994, 0.021 ], "z_axis": [ -0.074, 0.029, 0.997 ], "quaternion": [ 0.052, -0.038, 0.012, 0.998 ] } }, { "index": 118, "index_chain": 118, "chain_name": "a", "nt_resnum": 119, "nt_name": "U", "nt_code": "U", "nt_id": "///a/119", "linked_nts": [ "///a/118", "///a/120" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -56.742, "beta": 167.420, "gamma": 43.966, "delta": 78.550, "epsilon": -150.887, "zeta": -72.055, "epsilon_zeta": -78.832, "bb_type": "BI", "chi": -161.829, "glyco_bond": "anti", "C5prime_xyz": [ -1.465, 8.738, 0.626 ], "P_xyz": [ 1.072, 9.267, 0.957 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.919, "theta": -149.705, "eta_prime": 173.749, "theta_prime": -148.443, "eta_base": -138.063, "theta_base": -121.459, "v0": 1.386, "v1": -24.989, "v2": 37.821, "v3": -37.924, "v4": 23.017, "amplitude": 39.453, "phase_angle": 16.539, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.506, "filter_rmsd": 0.106, "frame": { "rmsd": 0.014, "origin": [ 215.405, 203.235, 303.249 ], "x_axis": [ -0.730, -0.529, -0.433 ], "y_axis": [ 0.537, -0.836, 0.115 ], "z_axis": [ -0.422, -0.148, 0.894 ], "quaternion": [ -0.287, -0.230, -0.009, 0.930 ] } }, { "index": 119, "index_chain": 119, "chain_name": "a", "nt_resnum": 120, "nt_name": "A", "nt_code": "A", "nt_id": "///a/120", "linked_nts": [ "///a/119", "///a/121" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -73.082, "beta": 168.316, "gamma": 66.127, "delta": 77.623, "epsilon": -137.386, "zeta": -57.533, "epsilon_zeta": -79.853, "bb_type": "BI", "chi": -154.833, "glyco_bond": "anti", "C5prime_xyz": [ -1.348, 8.720, 0.193 ], "P_xyz": [ 1.134, 9.162, -0.435 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.050, "theta": -134.083, "eta_prime": -179.706, "theta_prime": -138.856, "eta_base": -139.947, "theta_base": -124.124, "v0": 3.474, "v1": -27.272, "v2": 39.576, "v3": -38.505, "v4": 22.101, "amplitude": 40.748, "phase_angle": 13.774, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.686, "filter_rmsd": 0.042, "frame": { "rmsd": 0.013, "origin": [ 212.909, 203.463, 305.188 ], "x_axis": [ -0.391, -0.885, -0.253 ], "y_axis": [ 0.721, -0.466, 0.513 ], "z_axis": [ -0.572, 0.019, 0.820 ], "quaternion": [ -0.491, -0.252, 0.163, 0.818 ] } }, { "index": 120, "index_chain": 120, "chain_name": "a", "nt_resnum": 121, "nt_name": "G", "nt_code": "G", "nt_id": "///a/121", "linked_nts": [ "///a/120", "///a/122" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -109.391, "beta": 137.664, "gamma": 128.619, "delta": 78.813, "epsilon": -135.657, "zeta": -65.103, "epsilon_zeta": -70.555, "bb_type": "BI", "chi": -177.982, "glyco_bond": "anti", "C5prime_xyz": [ -1.377, 8.496, 1.542 ], "P_xyz": [ 0.127, 10.111, 0.147 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.229, "theta": -152.688, "eta_prime": -168.437, "theta_prime": -146.133, "eta_base": -133.120, "theta_base": -131.413, "v0": 3.277, "v1": -27.023, "v2": 39.264, "v3": -38.262, "v4": 22.099, "amplitude": 40.461, "phase_angle": 13.969, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 208.859, 202.662, 306.786 ], "x_axis": [ -0.028, -0.996, -0.089 ], "y_axis": [ 0.790, -0.076, 0.608 ], "z_axis": [ -0.612, -0.053, 0.789 ], "quaternion": [ 0.649, 0.255, -0.202, -0.688 ] } }, { "index": 121, "index_chain": 121, "chain_name": "a", "nt_resnum": 122, "nt_name": "G", "nt_code": "G", "nt_id": "///a/122", "linked_nts": [ "///a/121", "///a/123" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -63.708, "beta": -165.415, "gamma": 55.594, "delta": 142.874, "epsilon": -156.011, "zeta": -147.548, "epsilon_zeta": -8.463, "bb_type": "--", "chi": -121.938, "glyco_bond": "anti", "C5prime_xyz": [ -2.357, 8.682, -1.141 ], "P_xyz": [ -0.254, 10.103, -0.425 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.353, "theta": -150.503, "eta_prime": -153.881, "theta_prime": -157.150, "eta_base": -131.377, "theta_base": -126.227, "v0": -27.373, "v1": 39.841, "v2": -36.279, "v3": 21.323, "v4": 3.614, "amplitude": 39.685, "phase_angle": 156.089, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.788, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 205.340, 201.161, 307.240 ], "x_axis": [ 0.577, -0.815, -0.051 ], "y_axis": [ 0.556, 0.347, 0.755 ], "z_axis": [ -0.598, -0.464, 0.653 ], "quaternion": [ 0.803, 0.380, -0.170, -0.427 ] } }, { "index": 122, "index_chain": 122, "chain_name": "a", "nt_resnum": 123, "nt_name": "A", "nt_code": "A", "nt_id": "///a/123", "linked_nts": [ "///a/122", "///a/124" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": 0.928, "beta": 153.928, "gamma": 4.833, "delta": 146.595, "epsilon": -132.247, "zeta": -145.934, "epsilon_zeta": 13.687, "bb_type": "--", "chi": -100.962, "glyco_bond": "anti", "C5prime_xyz": [ -2.329, 8.048, -2.102 ], "P_xyz": [ -0.305, 9.659, -1.777 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -168.237, "theta": -137.290, "eta_prime": -153.669, "theta_prime": 176.059, "eta_base": -121.787, "theta_base": 122.939, "v0": -23.332, "v1": 37.134, "v2": -36.017, "v3": 23.434, "v4": -0.263, "amplitude": 37.947, "phase_angle": 161.649, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.013, "origin": [ 202.210, 199.433, 308.960 ], "x_axis": [ 0.639, -0.590, 0.493 ], "y_axis": [ 0.140, 0.720, 0.680 ], "z_axis": [ -0.756, -0.365, 0.543 ], "quaternion": [ 0.852, 0.307, -0.367, -0.214 ] } }, { "index": 123, "index_chain": 123, "chain_name": "a", "nt_resnum": 124, "nt_name": "A", "nt_code": "A", "nt_id": "///a/124", "linked_nts": [ "///a/123", "///a/125" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": 56.850, "beta": -149.041, "gamma": 166.409, "delta": 146.687, "epsilon": -131.783, "zeta": -51.878, "epsilon_zeta": -79.906, "bb_type": "BI", "chi": -152.489, "glyco_bond": "anti", "C5prime_xyz": [ -1.857, 8.633, 0.588 ], "P_xyz": [ 0.596, 9.386, 0.100 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 97.153, "theta": -97.348, "eta_prime": 109.152, "theta_prime": -136.359, "eta_base": 74.623, "theta_base": -120.836, "v0": -21.891, "v1": 35.998, "v2": -35.638, "v3": 23.877, "v4": -1.453, "amplitude": 37.175, "phase_angle": 163.467, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.018, "origin": [ 199.919, 203.675, 304.411 ], "x_axis": [ 0.871, 0.488, -0.061 ], "y_axis": [ -0.188, 0.446, 0.875 ], "z_axis": [ 0.455, -0.750, 0.480 ], "quaternion": [ 0.836, 0.486, 0.154, 0.202 ] } }, { "index": 124, "index_chain": 124, "chain_name": "a", "nt_resnum": 125, "nt_name": "U", "nt_code": "U", "nt_id": "///a/125", "linked_nts": [ "///a/124", "///a/126" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -156.153, "beta": 98.418, "gamma": 162.624, "delta": 81.408, "epsilon": -146.513, "zeta": -75.563, "epsilon_zeta": -70.950, "bb_type": "BI", "chi": -159.133, "glyco_bond": "anti", "C5prime_xyz": [ -1.602, 8.764, 0.450 ], "P_xyz": [ -2.128, 10.378, -1.540 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.209, "theta": 155.151, "eta_prime": 178.520, "theta_prime": 175.389, "eta_base": -151.232, "theta_base": -147.718, "v0": -0.179, "v1": -22.662, "v2": 35.491, "v3": -36.557, "v4": 23.208, "amplitude": 37.501, "phase_angle": 18.846, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.105, "frame": { "rmsd": 0.010, "origin": [ 200.438, 195.271, 307.947 ], "x_axis": [ 0.732, 0.030, 0.680 ], "y_axis": [ -0.555, 0.605, 0.571 ], "z_axis": [ -0.394, -0.796, 0.459 ], "quaternion": [ 0.836, 0.409, -0.321, 0.175 ] } }, { "index": 125, "index_chain": 125, "chain_name": "a", "nt_resnum": 126, "nt_name": "C", "nt_code": "C", "nt_id": "///a/126", "linked_nts": [ "///a/125", "///a/127" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -67.149, "beta": 166.492, "gamma": 68.187, "delta": 78.605, "epsilon": -141.345, "zeta": -63.896, "epsilon_zeta": -77.448, "bb_type": "BI", "chi": -156.043, "glyco_bond": "anti", "C5prime_xyz": [ -1.508, 8.832, 0.274 ], "P_xyz": [ 1.002, 9.293, -0.279 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.487, "theta": -132.095, "eta_prime": -170.926, "theta_prime": -133.903, "eta_base": -129.006, "theta_base": -100.660, "v0": 0.388, "v1": -24.308, "v2": 37.719, "v3": -38.418, "v4": 23.933, "amplitude": 39.654, "phase_angle": 17.971, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.620, "filter_rmsd": 0.067, "frame": { "rmsd": 0.011, "origin": [ 200.354, 191.448, 310.555 ], "x_axis": [ 0.255, 0.344, 0.904 ], "y_axis": [ -0.891, 0.447, 0.081 ], "z_axis": [ -0.376, -0.826, 0.420 ], "quaternion": [ 0.728, 0.311, -0.439, 0.424 ] } }, { "index": 126, "index_chain": 126, "chain_name": "a", "nt_resnum": 127, "nt_name": "U", "nt_code": "U", "nt_id": "///a/127", "linked_nts": [ "///a/126", "///a/128" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -84.854, "beta": 172.251, "gamma": 74.428, "delta": 78.527, "epsilon": -139.384, "zeta": -167.224, "epsilon_zeta": 27.840, "bb_type": "--", "chi": -153.901, "glyco_bond": "anti", "C5prime_xyz": [ -1.732, 8.811, 0.115 ], "P_xyz": [ 0.685, 9.554, -0.550 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.707, "theta": 115.751, "eta_prime": -177.976, "theta_prime": 123.756, "eta_base": -127.145, "theta_base": 132.158, "v0": -0.820, "v1": -22.817, "v2": 36.446, "v3": -37.868, "v4": 24.407, "amplitude": 38.725, "phase_angle": 19.753, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.267, "filter_rmsd": 0.102, "frame": { "rmsd": 0.012, "origin": [ 200.336, 189.837, 314.092 ], "x_axis": [ -0.262, 0.719, 0.644 ], "y_axis": [ -0.935, -0.025, -0.353 ], "z_axis": [ -0.238, -0.695, 0.679 ], "quaternion": [ 0.590, 0.145, -0.374, 0.701 ] } }, { "index": 127, "index_chain": 127, "chain_name": "a", "nt_resnum": 128, "nt_name": "G", "nt_code": "G", "nt_id": "///a/128", "linked_nts": [ "///a/127", "///a/129" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -79.949, "beta": 160.422, "gamma": 38.599, "delta": 80.669, "epsilon": -140.090, "zeta": -63.147, "epsilon_zeta": -76.942, "bb_type": "BI", "chi": -167.708, "glyco_bond": "anti", "C5prime_xyz": [ -1.270, 8.687, 0.963 ], "P_xyz": [ 1.257, 8.926, 1.552 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.424, "theta": -128.547, "eta_prime": 150.387, "theta_prime": -122.651, "eta_base": 134.448, "theta_base": -65.840, "v0": 1.275, "v1": -24.266, "v2": 36.664, "v3": -36.890, "v4": 22.499, "amplitude": 38.278, "phase_angle": 16.697, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "3a", "suiteness": 0.617, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 198.436, 178.936, 308.644 ], "x_axis": [ 0.664, 0.730, 0.166 ], "y_axis": [ -0.744, 0.619, 0.251 ], "z_axis": [ 0.080, -0.290, 0.954 ], "quaternion": [ 0.900, 0.150, -0.024, 0.409 ] } }, { "index": 128, "index_chain": 128, "chain_name": "a", "nt_resnum": 129, "nt_name": "C", "nt_code": "C", "nt_id": "///a/129", "linked_nts": [ "///a/128", "///a/130" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -71.908, "beta": 164.876, "gamma": 71.030, "delta": 84.582, "epsilon": -128.721, "zeta": -66.598, "epsilon_zeta": -62.123, "bb_type": "BI", "chi": -140.471, "glyco_bond": "anti", "C5prime_xyz": [ -1.474, 8.720, -0.639 ], "P_xyz": [ 0.990, 8.834, -1.550 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.288, "theta": -86.637, "eta_prime": -162.708, "theta_prime": -100.103, "eta_base": -90.285, "theta_base": -74.762, "v0": 1.733, "v1": -22.361, "v2": 33.337, "v3": -33.224, "v4": 19.935, "amplitude": 34.649, "phase_angle": 15.817, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.476, "filter_rmsd": 0.069, "frame": { "rmsd": 0.013, "origin": [ 200.145, 180.962, 311.600 ], "x_axis": [ -0.075, 0.860, 0.505 ], "y_axis": [ -0.876, -0.299, 0.379 ], "z_axis": [ 0.477, -0.414, 0.775 ], "quaternion": [ 0.592, 0.335, -0.012, 0.733 ] } }, { "index": 129, "index_chain": 129, "chain_name": "a", "nt_resnum": 130, "nt_name": "C", "nt_code": "C", "nt_id": "///a/130", "linked_nts": [ "///a/129", "///a/131" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 146.118, "beta": -171.034, "gamma": -172.659, "delta": 81.867, "epsilon": -112.894, "zeta": -82.882, "epsilon_zeta": -30.011, "bb_type": "--", "chi": -179.210, "glyco_bond": "anti", "C5prime_xyz": [ -1.018, 8.283, 1.745 ], "P_xyz": [ 0.659, 10.188, 1.277 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.098, "theta": -157.022, "eta_prime": 178.745, "theta_prime": -149.021, "eta_base": -130.852, "theta_base": -121.131, "v0": 6.764, "v1": -27.916, "v2": 37.659, "v3": -34.586, "v4": 17.472, "amplitude": 38.080, "phase_angle": 8.527, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.349, "filter_rmsd": 0.073, "frame": { "rmsd": 0.017, "origin": [ 198.235, 184.121, 319.015 ], "x_axis": [ -0.874, 0.393, -0.286 ], "y_axis": [ -0.290, -0.894, -0.342 ], "z_axis": [ -0.390, -0.216, 0.895 ], "quaternion": [ 0.178, -0.177, -0.146, 0.957 ] } }, { "index": 130, "index_chain": 130, "chain_name": "a", "nt_resnum": 131, "nt_name": "U", "nt_code": "U", "nt_id": "///a/131", "linked_nts": [ "///a/130", "///a/132" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -61.597, "beta": 168.500, "gamma": 53.130, "delta": 78.203, "epsilon": -149.093, "zeta": -75.099, "epsilon_zeta": -73.993, "bb_type": "BI", "chi": -159.848, "glyco_bond": "anti", "C5prime_xyz": [ -1.741, 8.805, 0.456 ], "P_xyz": [ 0.743, 9.561, 0.545 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.959, "theta": -149.829, "eta_prime": 176.853, "theta_prime": -149.096, "eta_base": -147.111, "theta_base": -122.142, "v0": -2.789, "v1": -21.335, "v2": 36.014, "v3": -38.532, "v4": 26.092, "amplitude": 39.002, "phase_angle": 22.574, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.357, "filter_rmsd": 0.101, "frame": { "rmsd": 0.011, "origin": [ 196.164, 185.441, 322.261 ], "x_axis": [ -0.754, -0.103, -0.649 ], "y_axis": [ 0.175, -0.983, -0.047 ], "z_axis": [ -0.633, -0.149, 0.760 ], "quaternion": [ -0.074, -0.343, -0.052, 0.935 ] } }, { "index": 131, "index_chain": 131, "chain_name": "a", "nt_resnum": 132, "nt_name": "G", "nt_code": "G", "nt_id": "///a/132", "linked_nts": [ "///a/131", "///a/133" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -62.236, "beta": 167.653, "gamma": 57.086, "delta": 74.019, "epsilon": -116.628, "zeta": -97.720, "epsilon_zeta": -18.908, "bb_type": "--", "chi": -168.227, "glyco_bond": "anti", "C5prime_xyz": [ -1.558, 8.733, 0.958 ], "P_xyz": [ 0.969, 9.388, 0.939 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.509, "theta": -124.447, "eta_prime": -177.233, "theta_prime": -135.087, "eta_base": -139.432, "theta_base": -129.058, "v0": 1.482, "v1": -26.733, "v2": 40.670, "v3": -40.860, "v4": 24.733, "amplitude": 42.445, "phase_angle": 16.626, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.831, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 192.371, 185.927, 324.657 ], "x_axis": [ -0.483, -0.594, -0.644 ], "y_axis": [ 0.593, -0.762, 0.258 ], "z_axis": [ -0.644, -0.257, 0.721 ], "quaternion": [ -0.345, -0.374, 0.000, 0.861 ] } }, { "index": 132, "index_chain": 132, "chain_name": "a", "nt_resnum": 133, "nt_name": "G", "nt_code": "G", "nt_id": "///a/133", "linked_nts": [ "///a/132", "///a/134" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 85.489, "beta": -128.346, "gamma": -122.567, "delta": 79.812, "epsilon": -124.710, "zeta": -69.409, "epsilon_zeta": -55.301, "bb_type": "--", "chi": -169.199, "glyco_bond": "anti", "C5prime_xyz": [ -1.122, 8.536, 1.071 ], "P_xyz": [ -0.912, 10.930, 0.043 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.849, "theta": -176.245, "eta_prime": 179.640, "theta_prime": -161.662, "eta_base": -158.379, "theta_base": -114.145, "v0": 6.264, "v1": -28.479, "v2": 38.767, "v3": -36.205, "v4": 18.891, "amplitude": 39.327, "phase_angle": 9.681, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 188.373, 186.739, 324.899 ], "x_axis": [ -0.245, -0.742, -0.624 ], "y_axis": [ 0.575, -0.630, 0.522 ], "z_axis": [ -0.781, -0.231, 0.581 ], "quaternion": [ -0.420, -0.448, 0.093, 0.783 ] } }, { "index": 133, "index_chain": 133, "chain_name": "a", "nt_resnum": 134, "nt_name": "U", "nt_code": "U", "nt_id": "///a/134", "linked_nts": [ "///a/133", "///a/135" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -66.473, "beta": 156.596, "gamma": 72.903, "delta": 75.628, "epsilon": -136.090, "zeta": -68.739, "epsilon_zeta": -67.351, "bb_type": "BI", "chi": -158.835, "glyco_bond": "anti", "C5prime_xyz": [ -1.789, 8.823, 0.390 ], "P_xyz": [ 0.548, 9.594, -0.458 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.564, "theta": -134.297, "eta_prime": -171.198, "theta_prime": -139.885, "eta_base": -113.435, "theta_base": -106.683, "v0": -1.221, "v1": -23.830, "v2": 38.430, "v3": -40.196, "v4": 26.084, "amplitude": 40.966, "phase_angle": 20.265, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.303, "filter_rmsd": 0.104, "frame": { "rmsd": 0.007, "origin": [ 185.392, 184.560, 324.131 ], "x_axis": [ 0.140, -0.975, -0.174 ], "y_axis": [ 0.366, -0.112, 0.924 ], "z_axis": [ -0.920, -0.193, 0.341 ], "quaternion": [ 0.585, 0.477, -0.319, -0.573 ] } }, { "index": 134, "index_chain": 134, "chain_name": "a", "nt_resnum": 135, "nt_name": "A", "nt_code": "A", "nt_id": "///a/135", "linked_nts": [ "///a/134", "///a/136" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -110.565, "beta": 173.036, "gamma": 85.853, "delta": 79.235, "epsilon": -148.253, "zeta": -44.196, "epsilon_zeta": -104.057, "bb_type": "BI", "chi": -168.653, "glyco_bond": "anti", "C5prime_xyz": [ -1.539, 8.659, 0.974 ], "P_xyz": [ 0.919, 9.425, 0.482 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 148.105, "theta": -131.057, "eta_prime": 166.198, "theta_prime": -143.105, "eta_base": -141.091, "theta_base": -136.251, "v0": 0.583, "v1": -24.008, "v2": 36.909, "v3": -37.532, "v4": 23.299, "amplitude": 38.742, "phase_angle": 17.694, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.013, "origin": [ 182.889, 181.563, 324.341 ], "x_axis": [ 0.788, -0.556, 0.267 ], "y_axis": [ 0.052, 0.491, 0.870 ], "z_axis": [ -0.614, -0.671, 0.415 ], "quaternion": [ 0.821, 0.470, -0.268, -0.185 ] } }, { "index": 135, "index_chain": 135, "chain_name": "a", "nt_resnum": 136, "nt_name": "G", "nt_code": "G", "nt_id": "///a/136", "linked_nts": [ "///a/135", "///a/137" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -132.916, "beta": 129.421, "gamma": 149.845, "delta": 80.432, "epsilon": -137.433, "zeta": -60.800, "epsilon_zeta": -76.633, "bb_type": "BI", "chi": -175.659, "glyco_bond": "anti", "C5prime_xyz": [ -1.238, 8.523, 1.442 ], "P_xyz": [ -0.366, 10.548, 0.000 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 179.430, "theta": -163.774, "eta_prime": -170.955, "theta_prime": -153.018, "eta_base": -144.107, "theta_base": -103.975, "v0": 3.224, "v1": -25.626, "v2": 37.023, "v3": -36.103, "v4": 20.736, "amplitude": 38.123, "phase_angle": 13.801, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.013, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 181.704, 177.737, 323.128 ], "x_axis": [ 0.653, -0.477, 0.588 ], "y_axis": [ -0.327, 0.522, 0.788 ], "z_axis": [ -0.683, -0.707, 0.185 ], "quaternion": [ 0.768, 0.486, -0.413, -0.049 ] } }, { "index": 136, "index_chain": 136, "chain_name": "a", "nt_resnum": 137, "nt_name": "U", "nt_code": "U", "nt_id": "///a/137", "linked_nts": [ "///a/136", "///a/138" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -79.204, "beta": 178.286, "gamma": 67.036, "delta": 83.353, "epsilon": -118.223, "zeta": 114.703, "epsilon_zeta": 127.073, "bb_type": "--", "chi": -162.084, "glyco_bond": "anti", "C5prime_xyz": [ -1.383, 8.705, 0.655 ], "P_xyz": [ 1.207, 9.056, 0.742 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.683, "theta": 58.784, "eta_prime": -166.750, "theta_prime": 60.213, "eta_base": -107.239, "theta_base": 77.801, "v0": 1.228, "v1": -23.226, "v2": 35.126, "v3": -35.293, "v4": 21.485, "amplitude": 36.663, "phase_angle": 16.646, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.574, "filter_rmsd": 0.105, "frame": { "rmsd": 0.007, "origin": [ 181.428, 173.752, 325.556 ], "x_axis": [ 0.191, 0.160, 0.969 ], "y_axis": [ -0.757, 0.652, 0.042 ], "z_axis": [ -0.624, -0.741, 0.245 ], "quaternion": [ 0.723, 0.271, -0.551, 0.317 ] } }, { "index": 137, "index_chain": 137, "chain_name": "a", "nt_resnum": 138, "nt_name": "G", "nt_code": "G", "nt_id": "///a/138", "linked_nts": [ "///a/137", "///a/139" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix", "alpha": -139.082, "beta": -165.504, "gamma": 54.029, "delta": 79.182, "epsilon": -144.305, "zeta": -58.922, "epsilon_zeta": -85.383, "bb_type": "BI", "chi": -165.225, "glyco_bond": "anti", "C5prime_xyz": [ -1.706, 8.831, 0.760 ], "P_xyz": [ 0.641, 9.595, 1.640 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.996, "theta": -137.579, "eta_prime": 165.261, "theta_prime": -139.583, "eta_base": 167.202, "theta_base": -100.216, "v0": -2.763, "v1": -20.659, "v2": 34.819, "v3": -37.345, "v4": 25.308, "amplitude": 37.734, "phase_angle": 22.668, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 167.376, 181.198, 318.296 ], "x_axis": [ 0.785, -0.071, -0.616 ], "y_axis": [ 0.520, -0.467, 0.716 ], "z_axis": [ -0.338, -0.882, -0.329 ], "quaternion": [ 0.497, 0.803, 0.140, -0.297 ] } }, { "index": 138, "index_chain": 138, "chain_name": "a", "nt_resnum": 139, "nt_name": "G", "nt_code": "G", "nt_id": "///a/139", "linked_nts": [ "///a/138", "///a/140" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -119.511, "beta": 147.131, "gamma": 114.048, "delta": 82.170, "epsilon": -147.135, "zeta": -66.319, "epsilon_zeta": -80.816, "bb_type": "BI", "chi": -179.872, "glyco_bond": "anti", "C5prime_xyz": [ -1.287, 8.377, 1.681 ], "P_xyz": [ 0.750, 9.566, 0.532 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.447, "theta": -149.358, "eta_prime": 177.781, "theta_prime": -153.791, "eta_base": -122.427, "theta_base": -142.378, "v0": 4.639, "v1": -26.726, "v2": 37.349, "v3": -35.637, "v4": 19.566, "amplitude": 38.143, "phase_angle": 11.715, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 167.379, 178.863, 315.487 ], "x_axis": [ 0.955, -0.294, -0.040 ], "y_axis": [ -0.091, -0.421, 0.902 ], "z_axis": [ -0.282, -0.858, -0.429 ], "quaternion": [ 0.526, 0.837, -0.115, -0.096 ] } }, { "index": 139, "index_chain": 139, "chain_name": "a", "nt_resnum": 140, "nt_name": "G", "nt_code": "G", "nt_id": "///a/140", "linked_nts": [ "///a/139", "///a/141" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -80.693, "beta": -177.839, "gamma": 68.267, "delta": 78.312, "epsilon": -158.788, "zeta": -79.513, "epsilon_zeta": -79.275, "bb_type": "BI", "chi": -168.546, "glyco_bond": "anti", "C5prime_xyz": [ -1.896, 8.803, 0.933 ], "P_xyz": [ 0.529, 9.734, 1.250 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.976, "theta": -162.297, "eta_prime": -176.107, "theta_prime": -161.911, "eta_base": -147.963, "theta_base": -140.608, "v0": -4.343, "v1": -19.565, "v2": 34.525, "v3": -37.929, "v4": 26.645, "amplitude": 38.067, "phase_angle": 24.913, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.537, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 167.085, 177.319, 311.476 ], "x_axis": [ 0.821, -0.432, 0.373 ], "y_axis": [ -0.514, -0.275, 0.813 ], "z_axis": [ -0.248, -0.859, -0.448 ], "quaternion": [ 0.524, 0.798, -0.296, 0.039 ] } }, { "index": 140, "index_chain": 140, "chain_name": "a", "nt_resnum": 141, "nt_name": "G", "nt_code": "G", "nt_id": "///a/141", "linked_nts": [ "///a/140", "///a/142" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end", "alpha": -66.966, "beta": 162.056, "gamma": 72.319, "delta": 81.260, "epsilon": -148.197, "zeta": -85.874, "epsilon_zeta": -62.323, "bb_type": "BI", "chi": -172.726, "glyco_bond": "anti", "C5prime_xyz": [ -1.512, 8.702, 1.218 ], "P_xyz": [ 1.058, 9.223, 1.192 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.334, "theta": -157.824, "eta_prime": -171.624, "theta_prime": -158.838, "eta_base": -139.825, "theta_base": -141.296, "v0": -1.480, "v1": -20.873, "v2": 33.971, "v3": -35.722, "v4": 23.528, "amplitude": 36.356, "phase_angle": 20.867, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.415, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 167.153, 175.165, 308.163 ], "x_axis": [ 0.478, -0.590, 0.651 ], "y_axis": [ -0.824, -0.044, 0.565 ], "z_axis": [ -0.305, -0.806, -0.507 ], "quaternion": [ 0.481, 0.712, -0.496, 0.121 ] } }, { "index": 141, "index_chain": 141, "chain_name": "a", "nt_resnum": 142, "nt_name": "G", "nt_code": "G", "nt_id": "///a/142", "linked_nts": [ "///a/141", "///a/143" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -72.032, "beta": 157.950, "gamma": 71.240, "delta": 84.646, "epsilon": -146.261, "zeta": -50.497, "epsilon_zeta": -95.765, "bb_type": "BI", "chi": -165.362, "glyco_bond": "anti", "C5prime_xyz": [ -1.370, 8.640, 0.840 ], "P_xyz": [ 1.194, 8.894, 0.354 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.904, "theta": -125.590, "eta_prime": -177.000, "theta_prime": -140.332, "eta_base": -146.016, "theta_base": -128.768, "v0": 3.378, "v1": -24.359, "v2": 34.877, "v3": -33.863, "v4": 19.271, "amplitude": 35.840, "phase_angle": 13.311, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.424, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 167.262, 173.196, 305.264 ], "x_axis": [ 0.012, -0.697, 0.717 ], "y_axis": [ -0.977, 0.145, 0.158 ], "z_axis": [ -0.214, -0.703, -0.679 ], "quaternion": [ -0.346, -0.622, 0.673, -0.203 ] } }, { "index": 142, "index_chain": 142, "chain_name": "a", "nt_resnum": 143, "nt_name": "A", "nt_code": "A", "nt_id": "///a/143", "linked_nts": [ "///a/142", "///a/144" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -132.331, "beta": 135.733, "gamma": 137.166, "delta": 82.574, "epsilon": -142.416, "zeta": -63.876, "epsilon_zeta": -78.540, "bb_type": "BI", "chi": 167.001, "glyco_bond": "anti", "C5prime_xyz": [ -1.521, 8.067, 2.316 ], "P_xyz": [ 0.168, 9.946, 1.619 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.063, "theta": -159.953, "eta_prime": -177.628, "theta_prime": -153.297, "eta_base": -140.377, "theta_base": -116.975, "v0": 2.815, "v1": -24.466, "v2": 35.554, "v3": -34.845, "v4": 20.211, "amplitude": 36.681, "phase_angle": 14.243, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.050, "frame": { "rmsd": 0.021, "origin": [ 168.681, 169.833, 303.129 ], "x_axis": [ -0.364, -0.428, 0.827 ], "y_axis": [ -0.869, 0.477, -0.135 ], "z_axis": [ -0.337, -0.768, -0.545 ], "quaternion": [ -0.377, -0.420, 0.772, -0.292 ] } }, { "index": 143, "index_chain": 143, "chain_name": "a", "nt_resnum": 144, "nt_name": "U", "nt_code": "U", "nt_id": "///a/144", "linked_nts": [ "///a/143", "///a/145" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -73.072, "beta": -173.708, "gamma": 55.962, "delta": 82.639, "epsilon": -150.367, "zeta": -92.713, "epsilon_zeta": -57.653, "bb_type": "BI", "chi": -160.739, "glyco_bond": "anti", "C5prime_xyz": [ -1.363, 8.677, 0.615 ], "P_xyz": [ 1.190, 9.002, 1.124 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.595, "theta": -166.335, "eta_prime": -172.407, "theta_prime": -168.851, "eta_base": -122.853, "theta_base": -179.436, "v0": 3.139, "v1": -24.634, "v2": 35.616, "v3": -34.736, "v4": 19.876, "amplitude": 36.668, "phase_angle": 13.758, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.868, "filter_rmsd": 0.105, "frame": { "rmsd": 0.011, "origin": [ 168.610, 165.754, 302.268 ], "x_axis": [ -0.911, -0.150, 0.385 ], "y_axis": [ -0.376, 0.687, -0.622 ], "z_axis": [ -0.171, -0.711, -0.682 ], "quaternion": [ -0.153, -0.145, 0.906, -0.368 ] } }, { "index": 144, "index_chain": 144, "chain_name": "a", "nt_resnum": 145, "nt_name": "A", "nt_code": "A", "nt_id": "///a/145", "linked_nts": [ "///a/144", "///a/146" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -70.536, "beta": 154.902, "gamma": 72.564, "delta": 77.247, "epsilon": -142.682, "zeta": -57.218, "epsilon_zeta": -85.464, "bb_type": "BI", "chi": -176.135, "glyco_bond": "anti", "C5prime_xyz": [ -2.148, 8.731, 1.279 ], "P_xyz": [ 0.257, 9.712, 1.392 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.187, "theta": -129.802, "eta_prime": 173.323, "theta_prime": -128.007, "eta_base": 168.827, "theta_base": -78.336, "v0": -8.185, "v1": -16.588, "v2": 33.490, "v3": -39.180, "v4": 29.899, "amplitude": 38.862, "phase_angle": 30.484, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.308, "filter_rmsd": 0.044, "frame": { "rmsd": 0.015, "origin": [ 172.455, 162.598, 300.501 ], "x_axis": [ -0.834, 0.036, 0.550 ], "y_axis": [ -0.394, 0.660, -0.640 ], "z_axis": [ -0.386, -0.751, -0.536 ], "quaternion": [ -0.269, -0.103, 0.870, -0.399 ] } }, { "index": 145, "index_chain": 145, "chain_name": "a", "nt_resnum": 146, "nt_name": "A", "nt_code": "A", "nt_id": "///a/146", "linked_nts": [ "///a/145", "///a/147" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -77.526, "beta": 167.252, "gamma": 71.409, "delta": 80.480, "epsilon": -114.618, "zeta": -62.135, "epsilon_zeta": -52.484, "bb_type": "--", "chi": -159.825, "glyco_bond": "anti", "C5prime_xyz": [ -1.498, 8.731, 0.476 ], "P_xyz": [ 1.016, 9.270, 0.003 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.786, "theta": -108.323, "eta_prime": -163.708, "theta_prime": -102.451, "eta_base": -95.278, "theta_base": -50.467, "v0": -0.656, "v1": -22.572, "v2": 35.945, "v3": -37.282, "v4": 23.947, "amplitude": 38.147, "phase_angle": 19.563, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.416, "filter_rmsd": 0.039, "frame": { "rmsd": 0.013, "origin": [ 167.735, 160.211, 299.494 ], "x_axis": [ -0.834, 0.401, -0.380 ], "y_axis": [ 0.513, 0.308, -0.801 ], "z_axis": [ -0.204, -0.863, -0.462 ], "quaternion": [ 0.054, 0.283, 0.807, -0.516 ] } }, { "index": 146, "index_chain": 146, "chain_name": "a", "nt_resnum": 147, "nt_name": "C", "nt_code": "C", "nt_id": "///a/147", "linked_nts": [ "///a/146", "///a/148" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -59.871, "beta": 153.306, "gamma": 62.627, "delta": 79.015, "epsilon": -135.316, "zeta": -81.085, "epsilon_zeta": -54.232, "bb_type": "BI", "chi": -152.146, "glyco_bond": "anti", "C5prime_xyz": [ -1.584, 8.879, 0.048 ], "P_xyz": [ 0.931, 9.252, -0.603 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.036, "theta": -111.473, "eta_prime": -167.940, "theta_prime": -125.245, "eta_base": -93.312, "theta_base": -102.512, "v0": -1.443, "v1": -21.680, "v2": 35.398, "v3": -37.161, "v4": 24.321, "amplitude": 37.850, "phase_angle": 20.736, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.343, "filter_rmsd": 0.065, "frame": { "rmsd": 0.008, "origin": [ 164.903, 162.087, 294.154 ], "x_axis": [ 0.245, 0.635, -0.733 ], "y_axis": [ 0.824, -0.535, -0.188 ], "z_axis": [ -0.511, -0.558, -0.654 ], "quaternion": [ 0.118, 0.780, 0.468, -0.399 ] } }, { "index": 147, "index_chain": 147, "chain_name": "a", "nt_resnum": 148, "nt_name": "G", "nt_code": "G", "nt_id": "///a/148", "linked_nts": [ "///a/147", "///a/149" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 101.417, "beta": -163.433, "gamma": -128.782, "delta": 87.599, "epsilon": -109.235, "zeta": -79.141, "epsilon_zeta": -30.093, "bb_type": "--", "chi": -179.533, "glyco_bond": "anti", "C5prime_xyz": [ -0.860, 8.113, 1.712 ], "P_xyz": [ 0.306, 10.443, 1.812 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.391, "theta": -156.546, "eta_prime": 177.537, "theta_prime": -142.342, "eta_base": -137.227, "theta_base": -79.391, "v0": 10.584, "v1": -29.157, "v2": 35.727, "v3": -30.626, "v4": 12.692, "amplitude": 35.746, "phase_angle": 1.864, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 163.209, 162.232, 288.429 ], "x_axis": [ 0.858, 0.445, -0.255 ], "y_axis": [ 0.512, -0.714, 0.477 ], "z_axis": [ 0.030, -0.540, -0.841 ], "quaternion": [ 0.275, 0.924, 0.259, -0.061 ] } }, { "index": 148, "index_chain": 148, "chain_name": "a", "nt_resnum": 149, "nt_name": "U", "nt_code": "U", "nt_id": "///a/149", "linked_nts": [ "///a/148", "///a/150" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -51.025, "beta": 148.764, "gamma": 51.518, "delta": 78.700, "epsilon": -155.802, "zeta": -81.162, "epsilon_zeta": -74.641, "bb_type": "BI", "chi": -165.230, "glyco_bond": "anti", "C5prime_xyz": [ -1.490, 8.717, 0.837 ], "P_xyz": [ 1.108, 8.973, 0.646 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 149.556, "theta": -154.341, "eta_prime": -179.591, "theta_prime": -159.672, "eta_base": -101.572, "theta_base": -163.589, "v0": 1.209, "v1": -24.739, "v2": 37.605, "v3": -37.789, "v4": 23.042, "amplitude": 39.276, "phase_angle": 16.773, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.202, "filter_rmsd": 0.107, "frame": { "rmsd": 0.007, "origin": [ 166.266, 161.973, 285.702 ], "x_axis": [ 0.926, -0.248, 0.284 ], "y_axis": [ -0.337, -0.882, 0.330 ], "z_axis": [ 0.169, -0.402, -0.900 ], "quaternion": [ 0.190, 0.963, -0.152, 0.118 ] } }, { "index": 149, "index_chain": 149, "chain_name": "a", "nt_resnum": 150, "nt_name": "C", "nt_code": "C", "nt_id": "///a/150", "linked_nts": [ "///a/149", "///a/151" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -59.177, "beta": 163.001, "gamma": 58.823, "delta": 77.641, "epsilon": -147.168, "zeta": -72.312, "epsilon_zeta": -74.856, "bb_type": "BI", "chi": -158.649, "glyco_bond": "anti", "C5prime_xyz": [ -1.647, 8.900, 0.389 ], "P_xyz": [ 0.872, 9.563, 0.144 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.801, "theta": -145.104, "eta_prime": 178.911, "theta_prime": -145.754, "eta_base": -170.864, "theta_base": -111.886, "v0": -1.596, "v1": -22.321, "v2": 36.468, "v3": -38.230, "v4": 25.130, "amplitude": 39.010, "phase_angle": 20.800, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.828, "filter_rmsd": 0.064, "frame": { "rmsd": 0.008, "origin": [ 166.454, 163.509, 282.892 ], "x_axis": [ 0.798, -0.510, 0.322 ], "y_axis": [ -0.536, -0.844, -0.007 ], "z_axis": [ 0.275, -0.167, -0.947 ], "quaternion": [ 0.042, 0.947, -0.276, 0.158 ] } }, { "index": 150, "index_chain": 150, "chain_name": "a", "nt_resnum": 151, "nt_name": "C", "nt_code": "C", "nt_id": "///a/151", "linked_nts": [ "///a/150", "///a/152" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -64.611, "beta": 166.559, "gamma": 57.915, "delta": 76.005, "epsilon": -141.366, "zeta": -83.352, "epsilon_zeta": -58.014, "bb_type": "BI", "chi": -162.567, "glyco_bond": "anti", "C5prime_xyz": [ -1.457, 8.840, 0.666 ], "P_xyz": [ 1.103, 9.402, 0.603 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.343, "theta": -154.122, "eta_prime": 179.493, "theta_prime": -154.332, "eta_base": -130.612, "theta_base": -136.659, "v0": 0.056, "v1": -24.312, "v2": 38.123, "v3": -39.049, "v4": 24.559, "amplitude": 40.198, "phase_angle": 18.492, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.879, "filter_rmsd": 0.065, "frame": { "rmsd": 0.006, "origin": [ 169.184, 162.744, 280.519 ], "x_axis": [ 0.265, -0.873, 0.409 ], "y_axis": [ -0.876, -0.395, -0.276 ], "z_axis": [ 0.403, -0.285, -0.870 ], "quaternion": [ 0.003, 0.795, -0.550, 0.255 ] } }, { "index": 151, "index_chain": 151, "chain_name": "a", "nt_resnum": 152, "nt_name": "G", "nt_code": "G", "nt_id": "///a/152", "linked_nts": [ "///a/151", "///a/153" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end,multiplet", "alpha": -64.406, "beta": 158.772, "gamma": 62.393, "delta": 77.893, "epsilon": -149.032, "zeta": -68.905, "epsilon_zeta": -80.127, "bb_type": "BI", "chi": -175.371, "glyco_bond": "anti", "C5prime_xyz": [ -1.669, 8.633, 1.372 ], "P_xyz": [ 0.865, 9.262, 1.395 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.128, "theta": -143.306, "eta_prime": 175.458, "theta_prime": -144.104, "eta_base": -152.350, "theta_base": -109.896, "v0": 0.448, "v1": -24.441, "v2": 37.764, "v3": -38.482, "v4": 23.966, "amplitude": 39.687, "phase_angle": 17.908, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.710, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 172.065, 162.198, 278.169 ], "x_axis": [ -0.224, -0.855, 0.467 ], "y_axis": [ -0.907, 0.008, -0.420 ], "z_axis": [ 0.356, -0.518, -0.778 ], "quaternion": [ -0.039, -0.622, 0.709, -0.331 ] } }, { "index": 152, "index_chain": 152, "chain_name": "a", "nt_resnum": 153, "nt_name": "G", "nt_code": "G", "nt_id": "///a/153", "linked_nts": [ "///a/152", "///a/154" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -72.467, "beta": -172.304, "gamma": 47.657, "delta": 80.596, "epsilon": -136.511, "zeta": -77.932, "epsilon_zeta": -58.579, "bb_type": "BI", "chi": -168.384, "glyco_bond": "anti", "C5prime_xyz": [ -1.195, 8.585, 1.011 ], "P_xyz": [ 1.300, 8.870, 1.766 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.289, "theta": -130.004, "eta_prime": 175.856, "theta_prime": -169.415, "eta_base": -135.552, "theta_base": 141.160, "v0": 4.563, "v1": -26.427, "v2": 37.062, "v3": -35.477, "v4": 19.525, "amplitude": 37.875, "phase_angle": 11.888, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.841, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 174.065, 159.200, 277.007 ], "x_axis": [ -0.843, -0.494, 0.211 ], "y_axis": [ -0.504, 0.591, -0.630 ], "z_axis": [ 0.187, -0.638, -0.747 ], "quaternion": [ -0.007, -0.280, 0.892, -0.355 ] } }, { "index": 153, "index_chain": 153, "chain_name": "a", "nt_resnum": 154, "nt_name": "A", "nt_code": "A", "nt_id": "///a/154", "linked_nts": [ "///a/153", "///a/155" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical", "alpha": 172.894, "beta": 146.928, "gamma": 51.514, "delta": 80.713, "epsilon": -115.849, "zeta": -85.355, "epsilon_zeta": -30.494, "bb_type": "--", "chi": -164.704, "glyco_bond": "anti", "C5prime_xyz": [ -1.377, 8.592, 0.776 ], "P_xyz": [ 1.211, 8.688, 0.404 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 26.764, "theta": -129.240, "eta_prime": 47.526, "theta_prime": -126.022, "eta_base": 27.166, "theta_base": -87.567, "v0": 4.552, "v1": -26.981, "v2": 37.921, "v3": -36.259, "v4": 20.042, "amplitude": 38.766, "phase_angle": 11.982, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.853, "filter_rmsd": 0.036, "frame": { "rmsd": 0.011, "origin": [ 181.753, 164.887, 268.747 ], "x_axis": [ -0.501, 0.864, 0.060 ], "y_axis": [ -0.865, -0.497, -0.064 ], "z_axis": [ -0.026, -0.084, 0.996 ], "quaternion": [ 0.500, 0.010, -0.043, 0.865 ] } }, { "index": 154, "index_chain": 154, "chain_name": "a", "nt_resnum": 155, "nt_name": "A", "nt_code": "A", "nt_id": "///a/155", "linked_nts": [ "///a/154", "///a/156" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -64.610, "beta": 133.731, "gamma": 88.389, "delta": 82.050, "epsilon": -139.347, "zeta": -67.516, "epsilon_zeta": -71.831, "bb_type": "BI", "chi": -154.818, "glyco_bond": "anti", "C5prime_xyz": [ -1.378, 8.679, 0.202 ], "P_xyz": [ 0.558, 8.851, -1.563 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.276, "theta": -132.465, "eta_prime": -163.740, "theta_prime": -140.173, "eta_base": -104.100, "theta_base": -99.541, "v0": 3.743, "v1": -25.836, "v2": 36.942, "v3": -35.680, "v4": 20.200, "amplitude": 37.917, "phase_angle": 13.026, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.132, "filter_rmsd": 0.038, "frame": { "rmsd": 0.011, "origin": [ 179.779, 167.100, 271.999 ], "x_axis": [ -0.928, 0.328, 0.178 ], "y_axis": [ -0.287, -0.932, 0.220 ], "z_axis": [ 0.238, 0.153, 0.959 ], "quaternion": [ 0.157, 0.106, 0.095, 0.977 ] } }, { "index": 155, "index_chain": 155, "chain_name": "a", "nt_resnum": 156, "nt_name": "A", "nt_code": "A", "nt_id": "///a/156", "linked_nts": [ "///a/155", "///a/157" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -67.525, "beta": 170.133, "gamma": 51.242, "delta": 79.784, "epsilon": -146.221, "zeta": 6.328, "epsilon_zeta": 207.450, "bb_type": "--", "chi": -171.566, "glyco_bond": "anti", "C5prime_xyz": [ -1.202, 8.463, 1.187 ], "P_xyz": [ 1.406, 8.622, 1.444 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.637, "theta": -73.551, "eta_prime": 176.911, "theta_prime": -77.007, "eta_base": -116.357, "theta_base": -49.593, "v0": 6.434, "v1": -28.758, "v2": 39.113, "v3": -36.404, "v4": 18.855, "amplitude": 39.652, "phase_angle": 9.464, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.942, "filter_rmsd": 0.041, "frame": { "rmsd": 0.009, "origin": [ 177.265, 167.826, 275.871 ], "x_axis": [ -0.818, -0.562, -0.121 ], "y_axis": [ 0.564, -0.826, 0.021 ], "z_axis": [ -0.111, -0.051, 0.992 ], "quaternion": [ -0.295, -0.061, -0.008, 0.953 ] } }, { "index": 156, "index_chain": 156, "chain_name": "a", "nt_resnum": 157, "nt_name": "C", "nt_code": "C", "nt_id": "///a/157", "linked_nts": [ "///a/156", "///a/158" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix-end,stem-end,multiplet", "alpha": -151.886, "beta": 140.031, "gamma": 172.461, "delta": 78.467, "epsilon": -152.411, "zeta": -73.221, "epsilon_zeta": -79.190, "bb_type": "BI", "chi": -146.571, "glyco_bond": "anti", "C5prime_xyz": [ -1.866, 8.901, -0.322 ], "P_xyz": [ -2.147, 10.645, -2.268 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -163.241, "theta": 161.772, "eta_prime": -132.444, "theta_prime": 173.314, "eta_base": -69.884, "theta_base": -150.144, "v0": -3.484, "v1": -20.466, "v2": 35.177, "v3": -38.157, "v4": 26.237, "amplitude": 38.402, "phase_angle": 23.650, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.057, "frame": { "rmsd": 0.009, "origin": [ 172.257, 162.087, 277.049 ], "x_axis": [ -0.280, -0.792, 0.542 ], "y_axis": [ 0.787, 0.134, 0.603 ], "z_axis": [ -0.550, 0.596, 0.585 ], "quaternion": [ 0.600, 0.003, -0.455, -0.658 ] } }, { "index": 157, "index_chain": 157, "chain_name": "a", "nt_resnum": 158, "nt_name": "G", "nt_code": "G", "nt_id": "///a/158", "linked_nts": [ "///a/157", "///a/159" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -69.826, "beta": 166.026, "gamma": 60.068, "delta": 76.885, "epsilon": -149.640, "zeta": -75.998, "epsilon_zeta": -73.642, "bb_type": "BI", "chi": -169.596, "glyco_bond": "anti", "C5prime_xyz": [ -1.466, 8.693, 1.060 ], "P_xyz": [ 1.083, 9.291, 1.020 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.211, "theta": -152.598, "eta_prime": 174.835, "theta_prime": -152.716, "eta_base": -138.989, "theta_base": -134.838, "v0": 2.143, "v1": -25.905, "v2": 38.600, "v3": -38.307, "v4": 22.827, "amplitude": 40.069, "phase_angle": 15.562, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.864, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 169.288, 163.155, 280.031 ], "x_axis": [ 0.366, -0.747, 0.556 ], "y_axis": [ 0.842, 0.520, 0.145 ], "z_axis": [ -0.397, 0.415, 0.819 ], "quaternion": [ 0.822, -0.082, -0.290, -0.483 ] } }, { "index": 158, "index_chain": 158, "chain_name": "a", "nt_resnum": 159, "nt_name": "G", "nt_code": "G", "nt_id": "///a/159", "linked_nts": [ "///a/158", "///a/160" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -64.207, "beta": 173.262, "gamma": 56.859, "delta": 78.677, "epsilon": -150.142, "zeta": -78.374, "epsilon_zeta": -71.768, "bb_type": "BI", "chi": -172.780, "glyco_bond": "anti", "C5prime_xyz": [ -1.585, 8.645, 1.232 ], "P_xyz": [ 0.921, 9.210, 1.709 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.307, "theta": -153.860, "eta_prime": -179.784, "theta_prime": -152.039, "eta_base": -148.662, "theta_base": -131.483, "v0": 0.127, "v1": -23.540, "v2": 36.650, "v3": -37.636, "v4": 23.629, "amplitude": 38.633, "phase_angle": 18.434, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.916, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 166.337, 163.004, 282.529 ], "x_axis": [ 0.781, -0.490, 0.387 ], "y_axis": [ 0.573, 0.809, -0.132 ], "z_axis": [ -0.249, 0.325, 0.913 ], "quaternion": [ 0.936, -0.122, -0.170, -0.284 ] } }, { "index": 159, "index_chain": 159, "chain_name": "a", "nt_resnum": 160, "nt_name": "G", "nt_code": "G", "nt_id": "///a/160", "linked_nts": [ "///a/159", "///a/161" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -63.692, "beta": 168.591, "gamma": 61.501, "delta": 80.595, "epsilon": -135.376, "zeta": -91.681, "epsilon_zeta": -43.695, "bb_type": "BI", "chi": -171.015, "glyco_bond": "anti", "C5prime_xyz": [ -1.557, 8.687, 1.147 ], "P_xyz": [ 0.993, 9.178, 1.439 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.147, "theta": -153.188, "eta_prime": -174.233, "theta_prime": -151.704, "eta_base": -143.790, "theta_base": -128.576, "v0": -0.369, "v1": -22.348, "v2": 35.205, "v3": -36.385, "v4": 23.203, "amplitude": 37.266, "phase_angle": 19.142, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.854, "filter_rmsd": 0.008, "frame": { "rmsd": 0.008, "origin": [ 164.421, 162.222, 285.779 ], "x_axis": [ 0.966, -0.058, 0.251 ], "y_axis": [ 0.134, 0.945, -0.298 ], "z_axis": [ -0.220, 0.322, 0.921 ], "quaternion": [ 0.979, -0.158, -0.120, -0.049 ] } }, { "index": 160, "index_chain": 160, "chain_name": "a", "nt_resnum": 161, "nt_name": "C", "nt_code": "C", "nt_id": "///a/161", "linked_nts": [ "///a/160", "///a/162" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -62.183, "beta": 151.337, "gamma": 62.044, "delta": 80.631, "epsilon": -142.903, "zeta": -66.968, "epsilon_zeta": -75.935, "bb_type": "BI", "chi": -157.833, "glyco_bond": "anti", "C5prime_xyz": [ -1.336, 8.810, 0.357 ], "P_xyz": [ 1.205, 9.006, -0.264 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.750, "theta": -132.663, "eta_prime": 177.792, "theta_prime": -138.464, "eta_base": -146.241, "theta_base": -118.843, "v0": 0.844, "v1": -23.415, "v2": 35.810, "v3": -36.249, "v4": 22.348, "amplitude": 37.508, "phase_angle": 17.305, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.535, "filter_rmsd": 0.069, "frame": { "rmsd": 0.012, "origin": [ 163.814, 161.859, 288.527 ], "x_axis": [ 0.884, 0.441, 0.157 ], "y_axis": [ -0.419, 0.895, -0.151 ], "z_axis": [ -0.208, 0.068, 0.976 ], "quaternion": [ 0.969, -0.057, -0.094, 0.222 ] } }, { "index": 161, "index_chain": 161, "chain_name": "a", "nt_resnum": 162, "nt_name": "G", "nt_code": "G", "nt_id": "///a/162", "linked_nts": [ "///a/161", "///a/163" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical", "alpha": -72.823, "beta": -173.447, "gamma": 39.736, "delta": 77.576, "epsilon": -154.402, "zeta": -79.216, "epsilon_zeta": -75.186, "bb_type": "BI", "chi": -163.855, "glyco_bond": "anti", "C5prime_xyz": [ -1.543, 8.735, 0.692 ], "P_xyz": [ 0.825, 9.533, 1.452 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.456, "theta": -163.595, "eta_prime": 164.549, "theta_prime": -159.079, "eta_base": -155.795, "theta_base": -150.225, "v0": 1.694, "v1": -25.389, "v2": 38.121, "v3": -38.193, "v4": 22.984, "amplitude": 39.698, "phase_angle": 16.203, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.625, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 164.973, 161.812, 292.409 ], "x_axis": [ 0.523, 0.687, -0.505 ], "y_axis": [ -0.846, 0.489, -0.210 ], "z_axis": [ 0.103, 0.537, 0.837 ], "quaternion": [ 0.844, -0.221, 0.180, 0.454 ] } }, { "index": 162, "index_chain": 162, "chain_name": "a", "nt_resnum": 163, "nt_name": "C", "nt_code": "C", "nt_id": "///a/163", "linked_nts": [ "///a/162", "///a/164" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -63.741, "beta": 168.936, "gamma": 63.632, "delta": 79.133, "epsilon": -136.285, "zeta": -89.800, "epsilon_zeta": -46.485, "bb_type": "BI", "chi": -154.399, "glyco_bond": "anti", "C5prime_xyz": [ -1.639, 8.907, 0.151 ], "P_xyz": [ 0.861, 9.597, -0.153 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.075, "theta": -153.826, "eta_prime": -175.368, "theta_prime": -151.129, "eta_base": -163.806, "theta_base": -133.866, "v0": -3.202, "v1": -20.087, "v2": 34.373, "v3": -37.215, "v4": 25.476, "amplitude": 37.457, "phase_angle": 23.412, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.772, "filter_rmsd": 0.063, "frame": { "rmsd": 0.007, "origin": [ 166.982, 161.651, 295.264 ], "x_axis": [ 0.216, 0.796, -0.566 ], "y_axis": [ -0.920, 0.360, 0.155 ], "z_axis": [ 0.327, 0.487, 0.810 ], "quaternion": [ 0.772, -0.107, 0.289, 0.555 ] } }, { "index": 163, "index_chain": 163, "chain_name": "a", "nt_resnum": 164, "nt_name": "U", "nt_code": "U", "nt_id": "///a/164", "linked_nts": [ "///a/163", "///a/165" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -59.857, "beta": 166.624, "gamma": 54.690, "delta": 78.928, "epsilon": -151.588, "zeta": -87.347, "epsilon_zeta": -64.241, "bb_type": "BI", "chi": -155.442, "glyco_bond": "anti", "C5prime_xyz": [ -1.656, 8.822, 0.235 ], "P_xyz": [ 0.855, 9.498, 0.089 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.684, "theta": -161.831, "eta_prime": 178.792, "theta_prime": -161.863, "eta_base": -156.142, "theta_base": -163.344, "v0": -1.542, "v1": -21.986, "v2": 35.818, "v3": -37.700, "v4": 24.763, "amplitude": 38.331, "phase_angle": 20.865, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.704, "filter_rmsd": 0.104, "frame": { "rmsd": 0.010, "origin": [ 169.584, 164.146, 298.840 ], "x_axis": [ -0.261, 0.684, -0.681 ], "y_axis": [ -0.946, -0.040, 0.322 ], "z_axis": [ 0.193, 0.728, 0.658 ], "quaternion": [ 0.582, -0.174, 0.375, 0.700 ] } }, { "index": 164, "index_chain": 164, "chain_name": "a", "nt_resnum": 165, "nt_name": "A", "nt_code": "A", "nt_id": "///a/165", "linked_nts": [ "///a/164", "///a/166" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -54.032, "beta": 168.317, "gamma": 56.455, "delta": 80.930, "epsilon": -155.301, "zeta": -79.845, "epsilon_zeta": -75.456, "bb_type": "BI", "chi": -151.262, "glyco_bond": "anti", "C5prime_xyz": [ -2.122, 8.849, -0.097 ], "P_xyz": [ 0.254, 9.922, -0.175 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 179.371, "theta": -157.903, "eta_prime": -175.026, "theta_prime": -155.665, "eta_base": -171.723, "theta_base": -121.465, "v0": -8.672, "v1": -14.226, "v2": 30.159, "v3": -36.088, "v4": 28.269, "amplitude": 35.702, "phase_angle": 32.354, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.745, "filter_rmsd": 0.041, "frame": { "rmsd": 0.017, "origin": [ 172.981, 165.948, 301.697 ], "x_axis": [ -0.423, 0.557, -0.714 ], "y_axis": [ -0.885, -0.088, 0.456 ], "z_axis": [ 0.192, 0.826, 0.531 ], "quaternion": [ 0.505, -0.183, 0.449, 0.714 ] } }, { "index": 165, "index_chain": 165, "chain_name": "a", "nt_resnum": 166, "nt_name": "A", "nt_code": "A", "nt_id": "///a/166", "linked_nts": [ "///a/165", "///a/167" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -70.422, "beta": 172.584, "gamma": 60.144, "delta": 83.181, "epsilon": -139.696, "zeta": -94.756, "epsilon_zeta": -44.940, "bb_type": "BI", "chi": -133.701, "glyco_bond": "anti", "C5prime_xyz": [ -1.480, 8.592, -1.025 ], "P_xyz": [ 1.002, 8.839, -1.792 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.982, "theta": -158.979, "eta_prime": -177.222, "theta_prime": 173.095, "eta_base": -137.120, "theta_base": 136.964, "v0": 1.991, "v1": -23.723, "v2": 35.143, "v3": -34.944, "v4": 20.810, "amplitude": 36.473, "phase_angle": 15.522, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.861, "filter_rmsd": 0.042, "frame": { "rmsd": 0.014, "origin": [ 173.509, 169.330, 302.880 ], "x_axis": [ -0.836, 0.470, -0.284 ], "y_axis": [ -0.409, -0.188, 0.893 ], "z_axis": [ 0.367, 0.862, 0.349 ], "quaternion": [ 0.285, 0.027, 0.570, 0.770 ] } }, { "index": 166, "index_chain": 166, "chain_name": "a", "nt_resnum": 167, "nt_name": "U", "nt_code": "U", "nt_id": "///a/167", "linked_nts": [ "///a/166", "///a/168" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -72.903, "beta": 169.987, "gamma": -56.140, "delta": 153.391, "epsilon": -90.597, "zeta": -83.423, "epsilon_zeta": -7.174, "bb_type": "--", "chi": -140.539, "glyco_bond": "anti", "C5prime_xyz": [ -1.812, 8.654, -0.032 ], "P_xyz": [ -1.409, 10.911, 1.226 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 87.287, "theta": -79.191, "eta_prime": 83.526, "theta_prime": -84.322, "eta_base": 57.024, "theta_base": -53.728, "v0": -20.827, "v1": 37.552, "v2": -38.910, "v3": 27.885, "v4": -4.654, "amplitude": 39.805, "phase_angle": 167.824, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32m", "cluster": "1o", "suiteness": 0.064, "filter_rmsd": 0.105, "frame": { "rmsd": 0.011, "origin": [ 183.476, 167.718, 313.466 ], "x_axis": [ -0.060, -0.777, 0.626 ], "y_axis": [ -0.987, 0.139, 0.078 ], "z_axis": [ -0.147, -0.613, -0.776 ], "quaternion": [ -0.275, -0.628, 0.703, -0.191 ] } }, { "index": 167, "index_chain": 167, "chain_name": "a", "nt_resnum": 168, "nt_name": "A", "nt_code": "A", "nt_id": "///a/168", "linked_nts": [ "///a/167", "///a/169" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -68.796, "beta": -150.355, "gamma": 59.006, "delta": 81.112, "epsilon": -132.472, "zeta": -62.880, "epsilon_zeta": -69.592, "bb_type": "BI", "chi": -163.596, "glyco_bond": "anti", "C5prime_xyz": [ -1.245, 8.594, 0.744 ], "P_xyz": [ 1.214, 8.701, 1.601 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -174.313, "theta": -122.172, "eta_prime": -139.662, "theta_prime": -116.831, "eta_base": -130.464, "theta_base": -68.994, "v0": 3.878, "v1": -26.057, "v2": 37.195, "v3": -35.937, "v4": 20.279, "amplitude": 38.163, "phase_angle": 12.930, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.674, "filter_rmsd": 0.042, "frame": { "rmsd": 0.015, "origin": [ 168.740, 172.730, 304.989 ], "x_axis": [ -0.417, -0.128, 0.900 ], "y_axis": [ 0.908, -0.094, 0.407 ], "z_axis": [ 0.033, 0.987, 0.156 ], "quaternion": [ -0.402, 0.361, 0.540, 0.645 ] } }, { "index": 168, "index_chain": 168, "chain_name": "a", "nt_resnum": 169, "nt_name": "C", "nt_code": "C", "nt_id": "///a/169", "linked_nts": [ "///a/168", "///a/170" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -71.850, "beta": 168.012, "gamma": 64.637, "delta": 80.827, "epsilon": -147.296, "zeta": -70.561, "epsilon_zeta": -76.735, "bb_type": "BI", "chi": -152.024, "glyco_bond": "anti", "C5prime_xyz": [ -1.569, 8.870, 0.010 ], "P_xyz": [ 0.938, 9.425, -0.439 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.251, "theta": -142.163, "eta_prime": -173.235, "theta_prime": -141.583, "eta_base": -107.272, "theta_base": -117.836, "v0": -2.032, "v1": -20.843, "v2": 34.438, "v3": -36.525, "v4": 24.355, "amplitude": 37.052, "phase_angle": 21.649, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.684, "filter_rmsd": 0.066, "frame": { "rmsd": 0.011, "origin": [ 167.548, 174.394, 308.420 ], "x_axis": [ 0.381, -0.313, 0.870 ], "y_axis": [ 0.903, 0.328, -0.277 ], "z_axis": [ -0.199, 0.891, 0.408 ], "quaternion": [ 0.727, -0.401, -0.368, -0.418 ] } }, { "index": 169, "index_chain": 169, "chain_name": "a", "nt_resnum": 170, "nt_name": "C", "nt_code": "C", "nt_id": "///a/170", "linked_nts": [ "///a/169", "///a/171" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -68.849, "beta": -171.480, "gamma": 48.385, "delta": 80.995, "epsilon": -176.367, "zeta": -92.604, "epsilon_zeta": -83.763, "bb_type": "BI", "chi": -155.568, "glyco_bond": "anti", "C5prime_xyz": [ -1.484, 8.829, 0.257 ], "P_xyz": [ 0.972, 9.500, 0.825 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.262, "theta": -153.101, "eta_prime": -179.036, "theta_prime": -165.447, "eta_base": -142.355, "theta_base": -100.382, "v0": -0.961, "v1": -21.825, "v2": 34.969, "v3": -36.495, "v4": 23.637, "amplitude": 37.224, "phase_angle": 20.046, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.872, "filter_rmsd": 0.065, "frame": { "rmsd": 0.012, "origin": [ 166.898, 177.995, 312.244 ], "x_axis": [ 0.812, -0.486, 0.322 ], "y_axis": [ 0.519, 0.349, -0.780 ], "z_axis": [ 0.267, 0.801, 0.536 ], "quaternion": [ 0.821, -0.481, -0.017, -0.306 ] } }, { "index": 170, "index_chain": 170, "chain_name": "a", "nt_resnum": 171, "nt_name": "G", "nt_code": "G", "nt_id": "///a/171", "linked_nts": [ "///a/170", "///a/172" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BI,non-canonical,helix", "alpha": 144.842, "beta": -152.394, "gamma": -177.343, "delta": 80.782, "epsilon": -140.763, "zeta": -51.720, "epsilon_zeta": -89.043, "bb_type": "BI", "chi": 12.571, "glyco_bond": "syn", "C5prime_xyz": [ -5.464, 4.045, -1.028 ], "P_xyz": [ -6.883, 2.453, 0.472 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.307, "theta": -145.030, "eta_prime": 169.493, "theta_prime": -140.233, "eta_base": -106.956, "theta_base": -159.660, "v0": -0.274, "v1": -22.624, "v2": 35.530, "v3": -36.696, "v4": 23.323, "amplitude": 37.579, "phase_angle": 19.008, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.543, "filter_rmsd": 0.022, "frame": { "rmsd": 0.022, "origin": [ 168.602, 180.322, 313.080 ], "x_axis": [ -0.406, -0.669, 0.623 ], "y_axis": [ -0.912, 0.344, -0.226 ], "z_axis": [ -0.063, -0.660, -0.749 ], "quaternion": [ -0.217, -0.500, 0.790, -0.280 ] } }, { "index": 171, "index_chain": 171, "chain_name": "a", "nt_resnum": 172, "nt_name": "C", "nt_code": "C", "nt_id": "///a/172", "linked_nts": [ "///a/171", "///a/173" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix", "alpha": -82.697, "beta": -174.430, "gamma": 56.830, "delta": 80.525, "epsilon": -146.442, "zeta": -72.605, "epsilon_zeta": -73.837, "bb_type": "BI", "chi": -161.828, "glyco_bond": "anti", "C5prime_xyz": [ -1.313, 8.775, 0.644 ], "P_xyz": [ 1.217, 9.198, 1.130 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.389, "theta": -144.451, "eta_prime": -176.836, "theta_prime": -140.893, "eta_base": -176.780, "theta_base": -110.760, "v0": 1.015, "v1": -23.650, "v2": 36.062, "v3": -36.373, "v4": 22.295, "amplitude": 37.716, "phase_angle": 17.033, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.568, "filter_rmsd": 0.064, "frame": { "rmsd": 0.010, "origin": [ 167.835, 180.595, 317.535 ], "x_axis": [ 0.823, 0.103, -0.558 ], "y_axis": [ -0.452, 0.714, -0.535 ], "z_axis": [ 0.343, 0.693, 0.634 ], "quaternion": [ 0.890, -0.345, 0.253, 0.156 ] } }, { "index": 172, "index_chain": 172, "chain_name": "a", "nt_resnum": 173, "nt_name": "A", "nt_code": "A", "nt_id": "///a/173", "linked_nts": [ "///a/172", "///a/174" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -68.491, "beta": 177.030, "gamma": 55.385, "delta": 82.585, "epsilon": -118.650, "zeta": -88.397, "epsilon_zeta": -30.252, "bb_type": "--", "chi": -169.831, "glyco_bond": "anti", "C5prime_xyz": [ -1.474, 8.543, 1.124 ], "P_xyz": [ 1.057, 8.890, 1.689 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.966, "theta": -140.989, "eta_prime": -174.653, "theta_prime": -137.704, "eta_base": -135.896, "theta_base": -109.043, "v0": 2.836, "v1": -24.453, "v2": 35.552, "v3": -34.894, "v4": 20.223, "amplitude": 36.684, "phase_angle": 14.269, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.979, "filter_rmsd": 0.038, "frame": { "rmsd": 0.013, "origin": [ 170.766, 183.051, 319.821 ], "x_axis": [ 0.278, 0.246, -0.928 ], "y_axis": [ -0.892, 0.425, -0.155 ], "z_axis": [ 0.357, 0.871, 0.338 ], "quaternion": [ 0.714, -0.359, 0.450, 0.398 ] } }, { "index": 173, "index_chain": 173, "chain_name": "a", "nt_resnum": 174, "nt_name": "U", "nt_code": "U", "nt_id": "///a/174", "linked_nts": [ "///a/173", "///a/175" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -75.040, "beta": 134.886, "gamma": 88.090, "delta": 79.335, "epsilon": -131.672, "zeta": -69.345, "epsilon_zeta": -62.327, "bb_type": "BI", "chi": -152.251, "glyco_bond": "anti", "C5prime_xyz": [ -1.598, 8.756, 0.046 ], "P_xyz": [ 0.255, 9.038, -1.776 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.686, "theta": -132.217, "eta_prime": -176.713, "theta_prime": -132.437, "eta_base": -133.812, "theta_base": -122.571, "v0": 1.827, "v1": -24.638, "v2": 36.895, "v3": -36.760, "v4": 22.020, "amplitude": 38.360, "phase_angle": 15.885, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.116, "filter_rmsd": 0.108, "frame": { "rmsd": 0.011, "origin": [ 172.787, 185.183, 319.988 ], "x_axis": [ -0.027, 0.605, -0.796 ], "y_axis": [ -0.707, 0.551, 0.444 ], "z_axis": [ 0.707, 0.574, 0.413 ], "quaternion": [ 0.696, -0.047, 0.540, 0.471 ] } }, { "index": 174, "index_chain": 174, "chain_name": "a", "nt_resnum": 175, "nt_name": "A", "nt_code": "A", "nt_id": "///a/175", "linked_nts": [ "///a/174", "///a/176" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -61.669, "beta": -166.059, "gamma": 53.000, "delta": 139.110, "epsilon": -72.745, "zeta": -139.158, "epsilon_zeta": 66.412, "bb_type": "--", "chi": -106.523, "glyco_bond": "anti", "C5prime_xyz": [ -2.342, 8.159, -1.972 ], "P_xyz": [ -0.129, 9.551, -1.841 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -153.002, "theta": -107.439, "eta_prime": -133.583, "theta_prime": -142.012, "eta_base": -120.960, "theta_base": -121.117, "v0": -23.665, "v1": 34.600, "v2": -31.806, "v3": 18.961, "v4": 2.743, "amplitude": 34.616, "phase_angle": 156.755, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.733, "filter_rmsd": 0.041, "frame": { "rmsd": 0.017, "origin": [ 175.363, 187.961, 319.142 ], "x_axis": [ -0.765, 0.221, -0.604 ], "y_axis": [ -0.472, 0.445, 0.761 ], "z_axis": [ 0.437, 0.868, -0.236 ], "quaternion": [ 0.333, -0.080, 0.782, 0.521 ] } }, { "index": 175, "index_chain": 175, "chain_name": "a", "nt_resnum": 176, "nt_name": "C", "nt_code": "C", "nt_id": "///a/176", "linked_nts": [ "///a/175", "///a/177" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BI,non-canonical,helix", "alpha": 34.118, "beta": -142.876, "gamma": -158.827, "delta": 144.455, "epsilon": -158.887, "zeta": -102.987, "epsilon_zeta": -55.900, "bb_type": "BI", "chi": 58.551, "glyco_bond": "syn", "C5prime_xyz": [ -5.517, 4.835, 1.246 ], "P_xyz": [ -6.005, 3.557, 3.494 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 131.502, "theta": 154.201, "eta_prime": 150.772, "theta_prime": 117.635, "eta_base": -173.466, "theta_base": 44.033, "v0": -27.292, "v1": 40.077, "v2": -36.687, "v3": 22.007, "v4": 3.036, "amplitude": 39.915, "phase_angle": 156.799, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.071, "frame": { "rmsd": 0.021, "origin": [ 177.636, 191.436, 321.324 ], "x_axis": [ 0.673, -0.288, -0.681 ], "y_axis": [ 0.737, 0.185, 0.650 ], "z_axis": [ -0.061, -0.940, 0.337 ], "quaternion": [ 0.741, 0.536, 0.209, -0.346 ] } }, { "index": 176, "index_chain": 176, "chain_name": "a", "nt_resnum": 177, "nt_name": "G", "nt_code": "G", "nt_id": "///a/177", "linked_nts": [ "///a/176", "///a/178" ], "nt_type": "RNA", "dbn": ".", "summary": "turn", "alpha": -105.268, "beta": 106.846, "gamma": 28.431, "delta": 86.857, "epsilon": -76.035, "zeta": -147.640, "epsilon_zeta": 71.605, "bb_type": "--", "chi": 164.582, "glyco_bond": "--", "C5prime_xyz": [ -1.814, 8.224, 2.358 ], "P_xyz": [ 0.212, 6.992, 3.477 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 93.892, "theta": -130.221, "eta_prime": 80.465, "theta_prime": -116.763, "eta_base": 49.545, "theta_base": -103.447, "v0": -3.022, "v1": -17.470, "v2": 29.882, "v3": -32.369, "v4": 22.419, "amplitude": 32.630, "phase_angle": 23.684, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.024, "frame": { "rmsd": 0.024, "origin": [ 179.900, 188.456, 328.203 ], "x_axis": [ -0.549, -0.014, 0.835 ], "y_axis": [ 0.513, 0.784, 0.350 ], "z_axis": [ -0.659, 0.621, -0.424 ], "quaternion": [ -0.450, 0.150, 0.830, 0.293 ] } }, { "index": 177, "index_chain": 177, "chain_name": "a", "nt_resnum": 178, "nt_name": "U", "nt_code": "U", "nt_id": "///a/178", "linked_nts": [ "///a/177", "///a/179" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -33.423, "beta": 140.311, "gamma": 64.124, "delta": 82.801, "epsilon": -146.561, "zeta": -77.091, "epsilon_zeta": -69.470, "bb_type": "BI", "chi": -152.724, "glyco_bond": "anti", "C5prime_xyz": [ -1.601, 8.803, 0.069 ], "P_xyz": [ 0.874, 8.926, -0.769 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -156.415, "theta": -115.236, "eta_prime": -147.471, "theta_prime": -130.245, "eta_base": -139.015, "theta_base": -106.739, "v0": -1.944, "v1": -19.872, "v2": 32.831, "v3": -34.863, "v4": 23.277, "amplitude": 35.335, "phase_angle": 21.702, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.102, "frame": { "rmsd": 0.008, "origin": [ 176.104, 194.725, 320.603 ], "x_axis": [ -0.444, 0.570, 0.691 ], "y_axis": [ 0.895, 0.240, 0.377 ], "z_axis": [ 0.049, 0.786, -0.617 ], "quaternion": [ -0.211, 0.483, 0.758, 0.383 ] } }, { "index": 178, "index_chain": 178, "chain_name": "a", "nt_resnum": 179, "nt_name": "C", "nt_code": "C", "nt_id": "///a/179", "linked_nts": [ "///a/178", "///a/180" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -173.991, "beta": -164.673, "gamma": 135.383, "delta": 80.199, "epsilon": -103.629, "zeta": -105.822, "epsilon_zeta": 2.193, "bb_type": "--", "chi": -152.596, "glyco_bond": "anti", "C5prime_xyz": [ -1.453, 8.820, 0.085 ], "P_xyz": [ 0.497, 9.504, -1.514 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 151.538, "theta": -151.338, "eta_prime": 169.345, "theta_prime": -148.538, "eta_base": -149.000, "theta_base": -119.327, "v0": 1.148, "v1": -23.720, "v2": 36.082, "v3": -36.371, "v4": 22.216, "amplitude": 37.709, "phase_angle": 16.890, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.065, "frame": { "rmsd": 0.008, "origin": [ 175.056, 198.287, 320.047 ], "x_axis": [ 0.161, 0.249, 0.955 ], "y_axis": [ 0.972, 0.126, -0.197 ], "z_axis": [ -0.169, 0.960, -0.222 ], "quaternion": [ 0.516, -0.560, -0.545, -0.350 ] } }, { "index": 179, "index_chain": 179, "chain_name": "a", "nt_resnum": 180, "nt_name": "C", "nt_code": "C", "nt_id": "///a/180", "linked_nts": [ "///a/179", "///a/181" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -54.573, "beta": 135.624, "gamma": 60.328, "delta": 79.271, "epsilon": -144.512, "zeta": -68.756, "epsilon_zeta": -75.756, "bb_type": "BI", "chi": -151.424, "glyco_bond": "anti", "C5prime_xyz": [ -1.599, 8.891, -0.017 ], "P_xyz": [ 0.841, 8.966, -0.948 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.078, "theta": -131.731, "eta_prime": 174.115, "theta_prime": -135.650, "eta_base": -145.129, "theta_base": -103.752, "v0": -1.957, "v1": -21.369, "v2": 35.251, "v3": -37.269, "v4": 24.790, "amplitude": 37.877, "phase_angle": 21.459, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.775, "filter_rmsd": 0.065, "frame": { "rmsd": 0.008, "origin": [ 175.251, 201.987, 320.892 ], "x_axis": [ 0.672, -0.175, 0.720 ], "y_axis": [ 0.741, 0.167, -0.651 ], "z_axis": [ -0.006, 0.970, 0.242 ], "quaternion": [ 0.721, -0.562, -0.252, -0.317 ] } }, { "index": 180, "index_chain": 180, "chain_name": "a", "nt_resnum": 181, "nt_name": "U", "nt_code": "U", "nt_id": "///a/181", "linked_nts": [ "///a/180", "///a/182" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -69.298, "beta": 175.918, "gamma": 56.883, "delta": 85.759, "epsilon": -99.365, "zeta": -105.549, "epsilon_zeta": 6.184, "bb_type": "--", "chi": -149.187, "glyco_bond": "anti", "C5prime_xyz": [ -1.630, 8.777, -0.136 ], "P_xyz": [ 0.934, 9.330, -0.186 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.879, "theta": -108.441, "eta_prime": -166.034, "theta_prime": -150.719, "eta_base": -122.554, "theta_base": 140.748, "v0": -2.861, "v1": -18.176, "v2": 30.940, "v3": -33.413, "v4": 22.910, "amplitude": 33.687, "phase_angle": 23.299, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.912, "filter_rmsd": 0.102, "frame": { "rmsd": 0.008, "origin": [ 177.041, 204.645, 323.413 ], "x_axis": [ 0.934, -0.356, 0.020 ], "y_axis": [ 0.166, 0.386, -0.908 ], "z_axis": [ 0.315, 0.851, 0.419 ], "quaternion": [ 0.828, -0.531, 0.089, -0.158 ] } }, { "index": 181, "index_chain": 181, "chain_name": "a", "nt_resnum": 182, "nt_name": "G", "nt_code": "G", "nt_id": "///a/182", "linked_nts": [ "///a/181", "///a/183" ], "nt_type": "RNA", "dbn": ".", "summary": "BI", "alpha": 78.900, "beta": -135.234, "gamma": 105.590, "delta": 80.649, "epsilon": -176.529, "zeta": -93.375, "epsilon_zeta": -83.154, "bb_type": "BI", "chi": -55.794, "glyco_bond": "--", "C5prime_xyz": [ -3.603, 5.884, -3.360 ], "P_xyz": [ -2.364, 4.023, -4.694 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 13.928, "theta": -143.160, "eta_prime": 42.671, "theta_prime": -173.036, "eta_base": 26.472, "theta_base": 124.136, "v0": -0.069, "v1": -22.742, "v2": 35.551, "v3": -36.590, "v4": 23.167, "amplitude": 37.537, "phase_angle": 18.724, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 171.068, 214.610, 317.507 ], "x_axis": [ -0.704, -0.711, 0.000 ], "y_axis": [ 0.531, -0.525, 0.665 ], "z_axis": [ -0.472, 0.468, 0.747 ], "quaternion": [ -0.360, -0.137, 0.328, 0.863 ] } }, { "index": 182, "index_chain": 182, "chain_name": "a", "nt_resnum": 183, "nt_name": "A", "nt_code": "A", "nt_id": "///a/183", "linked_nts": [ "///a/182", "///a/184" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 138.660, "beta": -153.432, "gamma": 165.573, "delta": 85.362, "epsilon": -110.085, "zeta": -56.006, "epsilon_zeta": -54.079, "bb_type": "--", "chi": -92.268, "glyco_bond": "anti", "C5prime_xyz": [ -2.454, 7.371, -2.921 ], "P_xyz": [ -2.326, 6.227, -5.280 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 148.791, "theta": -114.825, "eta_prime": 148.016, "theta_prime": -107.852, "eta_base": 114.280, "theta_base": -71.676, "v0": 0.710, "v1": -21.019, "v2": 32.079, "v3": -32.536, "v4": 20.117, "amplitude": 33.616, "phase_angle": 17.392, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.388, "filter_rmsd": 0.037, "frame": { "rmsd": 0.008, "origin": [ 172.946, 216.483, 321.968 ], "x_axis": [ -0.823, -0.292, -0.487 ], "y_axis": [ 0.002, -0.860, 0.511 ], "z_axis": [ -0.568, 0.419, 0.708 ], "quaternion": [ -0.080, -0.287, 0.252, 0.921 ] } }, { "index": 183, "index_chain": 183, "chain_name": "a", "nt_resnum": 184, "nt_name": "G", "nt_code": "G", "nt_id": "///a/184", "linked_nts": [ "///a/183", "///a/185" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -68.476, "beta": 160.106, "gamma": 58.876, "delta": 82.439, "epsilon": -115.622, "zeta": -66.811, "epsilon_zeta": -48.811, "bb_type": "--", "chi": -163.644, "glyco_bond": "anti", "C5prime_xyz": [ -1.194, 8.575, 0.730 ], "P_xyz": [ 1.407, 8.619, 0.336 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.954, "theta": -110.125, "eta_prime": -168.569, "theta_prime": -103.766, "eta_base": -121.271, "theta_base": -71.358, "v0": 7.129, "v1": -28.580, "v2": 38.030, "v3": -34.932, "v4": 17.571, "amplitude": 38.419, "phase_angle": 8.165, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.264, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 171.181, 209.031, 319.653 ], "x_axis": [ 0.869, -0.435, -0.234 ], "y_axis": [ 0.255, -0.011, 0.967 ], "z_axis": [ -0.423, -0.900, 0.102 ], "quaternion": [ 0.700, 0.667, -0.068, -0.247 ] } }, { "index": 184, "index_chain": 184, "chain_name": "a", "nt_resnum": 185, "nt_name": "G", "nt_code": "G", "nt_id": "///a/185", "linked_nts": [ "///a/184", "///a/186" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -62.579, "beta": 144.010, "gamma": 86.202, "delta": 80.999, "epsilon": -146.301, "zeta": -69.622, "epsilon_zeta": -76.679, "bb_type": "BI", "chi": -171.956, "glyco_bond": "anti", "C5prime_xyz": [ -1.230, 8.517, 1.210 ], "P_xyz": [ 1.067, 9.010, 0.030 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.980, "theta": -141.074, "eta_prime": -153.585, "theta_prime": -148.413, "eta_base": -86.992, "theta_base": -126.303, "v0": 6.268, "v1": -28.512, "v2": 38.800, "v3": -36.188, "v4": 18.835, "amplitude": 39.353, "phase_angle": 9.621, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.141, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 174.748, 203.201, 321.103 ], "x_axis": [ 0.595, -0.294, 0.748 ], "y_axis": [ -0.667, 0.338, 0.664 ], "z_axis": [ -0.448, -0.894, 0.005 ], "quaternion": [ 0.696, 0.559, -0.429, 0.134 ] } }, { "index": 185, "index_chain": 185, "chain_name": "a", "nt_resnum": 186, "nt_name": "G", "nt_code": "G", "nt_id": "///a/186", "linked_nts": [ "///a/185", "///a/187" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -76.305, "beta": 166.256, "gamma": 74.940, "delta": 80.172, "epsilon": -147.178, "zeta": -74.671, "epsilon_zeta": -72.506, "bb_type": "BI", "chi": -172.193, "glyco_bond": "anti", "C5prime_xyz": [ -1.380, 8.606, 1.198 ], "P_xyz": [ 1.170, 9.132, 0.912 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.481, "theta": -146.893, "eta_prime": -173.297, "theta_prime": -148.443, "eta_base": -127.852, "theta_base": -130.151, "v0": 2.586, "v1": -25.552, "v2": 37.468, "v3": -36.962, "v4": 21.691, "amplitude": 38.758, "phase_angle": 14.822, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.312, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 175.348, 199.633, 320.879 ], "x_axis": [ 0.103, -0.109, 0.989 ], "y_axis": [ -0.920, 0.367, 0.136 ], "z_axis": [ -0.377, -0.924, -0.062 ], "quaternion": [ 0.593, 0.447, -0.576, 0.342 ] } }, { "index": 186, "index_chain": 186, "chain_name": "a", "nt_resnum": 187, "nt_name": "A", "nt_code": "A", "nt_id": "///a/187", "linked_nts": [ "///a/186", "///a/188" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -65.157, "beta": 179.130, "gamma": 51.829, "delta": 81.346, "epsilon": -154.722, "zeta": -80.035, "epsilon_zeta": -74.687, "bb_type": "BI", "chi": -170.688, "glyco_bond": "anti", "C5prime_xyz": [ -1.577, 8.615, 1.156 ], "P_xyz": [ 0.855, 9.111, 1.990 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.743, "theta": -157.382, "eta_prime": -179.253, "theta_prime": -153.825, "eta_base": -146.316, "theta_base": -132.258, "v0": 0.104, "v1": -22.245, "v2": 34.606, "v3": -35.533, "v4": 22.366, "amplitude": 36.483, "phase_angle": 18.458, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.977, "filter_rmsd": 0.041, "frame": { "rmsd": 0.012, "origin": [ 175.998, 195.661, 320.926 ], "x_axis": [ -0.263, 0.344, 0.901 ], "y_axis": [ -0.819, 0.415, -0.397 ], "z_axis": [ -0.510, -0.843, 0.172 ], "quaternion": [ 0.575, 0.194, -0.613, 0.505 ] } }, { "index": 187, "index_chain": 187, "chain_name": "a", "nt_resnum": 188, "nt_name": "G", "nt_code": "G", "nt_id": "///a/188", "linked_nts": [ "///a/187", "///a/189" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -64.730, "beta": 172.321, "gamma": 59.436, "delta": 85.522, "epsilon": -145.076, "zeta": -88.971, "epsilon_zeta": -56.105, "bb_type": "BI", "chi": -162.589, "glyco_bond": "anti", "C5prime_xyz": [ -1.288, 8.706, 0.713 ], "P_xyz": [ 1.302, 8.954, 0.957 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.989, "theta": -155.234, "eta_prime": -173.451, "theta_prime": -153.253, "eta_base": -144.792, "theta_base": -152.470, "v0": 1.411, "v1": -21.880, "v2": 32.758, "v3": -32.845, "v4": 19.880, "amplitude": 34.125, "phase_angle": 16.275, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.859, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 175.989, 191.992, 321.893 ], "x_axis": [ -0.653, 0.460, 0.601 ], "y_axis": [ -0.597, 0.175, -0.783 ], "z_axis": [ -0.465, -0.870, 0.161 ], "quaternion": [ -0.413, -0.053, 0.646, -0.640 ] } }, { "index": 188, "index_chain": 188, "chain_name": "a", "nt_resnum": 189, "nt_name": "A", "nt_code": "A", "nt_id": "///a/189", "linked_nts": [ "///a/188", "///a/190" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -50.726, "beta": -175.925, "gamma": 66.918, "delta": 77.170, "epsilon": -155.301, "zeta": -73.785, "epsilon_zeta": -81.515, "bb_type": "BI", "chi": -123.842, "glyco_bond": "anti", "C5prime_xyz": [ -2.592, 8.545, -1.602 ], "P_xyz": [ -0.595, 9.697, -2.821 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -155.745, "theta": -157.012, "eta_prime": -153.782, "theta_prime": -154.812, "eta_base": -157.513, "theta_base": -121.058, "v0": -11.065, "v1": -13.408, "v2": 31.118, "v3": -38.437, "v4": 31.217, "amplitude": 38.035, "phase_angle": 35.101, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.507, "filter_rmsd": 0.040, "frame": { "rmsd": 0.014, "origin": [ 176.573, 184.744, 323.137 ], "x_axis": [ -0.830, -0.021, 0.558 ], "y_axis": [ -0.558, 0.041, -0.829 ], "z_axis": [ -0.006, -0.999, -0.046 ], "quaternion": [ -0.203, -0.209, 0.692, -0.660 ] } }, { "index": 189, "index_chain": 189, "chain_name": "a", "nt_resnum": 190, "nt_name": "A", "nt_code": "A", "nt_id": "///a/190", "linked_nts": [ "///a/189", "///a/191" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -73.013, "beta": 171.734, "gamma": 55.529, "delta": 81.663, "epsilon": -134.411, "zeta": -107.356, "epsilon_zeta": -27.055, "bb_type": "--", "chi": -123.197, "glyco_bond": "anti", "C5prime_xyz": [ -1.821, 8.435, -1.596 ], "P_xyz": [ 0.586, 8.812, -2.563 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.757, "theta": -176.396, "eta_prime": 176.948, "theta_prime": 156.482, "eta_base": -144.171, "theta_base": 118.009, "v0": -0.999, "v1": -21.067, "v2": 33.799, "v3": -35.253, "v4": 22.953, "amplitude": 35.999, "phase_angle": 20.134, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.889, "filter_rmsd": 0.041, "frame": { "rmsd": 0.016, "origin": [ 174.529, 182.037, 323.148 ], "x_axis": [ -0.901, 0.432, 0.048 ], "y_axis": [ -0.169, -0.246, -0.954 ], "z_axis": [ -0.400, -0.868, 0.295 ], "quaternion": [ 0.192, -0.113, -0.583, 0.781 ] } }, { "index": 190, "index_chain": 190, "chain_name": "a", "nt_resnum": 191, "nt_name": "A", "nt_code": "A", "nt_id": "///a/191", "linked_nts": [ "///a/190", "///a/192" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII", "alpha": -106.007, "beta": 149.995, "gamma": -5.923, "delta": 154.388, "epsilon": -86.208, "zeta": 144.246, "epsilon_zeta": 129.546, "bb_type": "BII", "chi": -114.339, "glyco_bond": "anti", "C5prime_xyz": [ -2.016, 8.332, -1.403 ], "P_xyz": [ -0.305, 9.885, -0.172 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 86.641, "theta": 170.532, "eta_prime": 93.566, "theta_prime": 162.096, "eta_base": 74.842, "theta_base": -154.421, "v0": -20.780, "v1": 37.600, "v2": -39.007, "v3": 28.053, "v4": -4.816, "amplitude": 39.878, "phase_angle": 168.003, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.019, "origin": [ 181.975, 171.656, 314.463 ], "x_axis": [ 0.394, 0.632, -0.667 ], "y_axis": [ -0.836, 0.548, 0.025 ], "z_axis": [ 0.381, 0.548, 0.745 ], "quaternion": [ 0.820, -0.160, 0.320, 0.448 ] } }, { "index": 191, "index_chain": 191, "chain_name": "a", "nt_resnum": 192, "nt_name": "G", "nt_code": "G", "nt_id": "///a/192", "linked_nts": [ "///a/191", "///a/193" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -81.099, "beta": 108.119, "gamma": 92.626, "delta": 81.122, "epsilon": -176.011, "zeta": -91.401, "epsilon_zeta": -84.610, "bb_type": "BI", "chi": -167.016, "glyco_bond": "anti", "C5prime_xyz": [ -1.372, 8.705, 0.927 ], "P_xyz": [ 0.459, 8.911, -0.943 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -169.007, "theta": -142.438, "eta_prime": -145.457, "theta_prime": -164.679, "eta_base": -92.812, "theta_base": -162.254, "v0": 1.587, "v1": -24.108, "v2": 36.126, "v3": -36.111, "v4": 21.812, "amplitude": 37.613, "phase_angle": 16.165, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 181.073, 168.797, 321.724 ], "x_axis": [ -0.196, 0.404, 0.894 ], "y_axis": [ -0.909, 0.267, -0.320 ], "z_axis": [ -0.367, -0.875, 0.315 ], "quaternion": [ 0.589, 0.236, -0.536, 0.558 ] } }, { "index": 192, "index_chain": 192, "chain_name": "a", "nt_resnum": 193, "nt_name": "U", "nt_code": "U", "nt_id": "///a/193", "linked_nts": [ "///a/192", "///a/194" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -174.482, "beta": -137.852, "gamma": 138.722, "delta": 79.445, "epsilon": -139.926, "zeta": -70.122, "epsilon_zeta": -69.804, "bb_type": "BI", "chi": -165.858, "glyco_bond": "anti", "C5prime_xyz": [ -1.536, 8.734, 0.840 ], "P_xyz": [ 0.790, 9.210, -0.238 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.957, "theta": -136.342, "eta_prime": 174.429, "theta_prime": -142.804, "eta_base": -164.237, "theta_base": -116.361, "v0": -0.913, "v1": -21.960, "v2": 35.334, "v3": -36.750, "v4": 23.717, "amplitude": 37.584, "phase_angle": 19.925, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.105, "frame": { "rmsd": 0.009, "origin": [ 182.162, 165.826, 322.632 ], "x_axis": [ -0.565, 0.430, 0.704 ], "y_axis": [ -0.810, -0.125, -0.573 ], "z_axis": [ -0.158, -0.894, 0.419 ], "quaternion": [ 0.427, 0.188, -0.505, 0.726 ] } }, { "index": 193, "index_chain": 193, "chain_name": "a", "nt_resnum": 194, "nt_name": "G", "nt_code": "G", "nt_id": "///a/194", "linked_nts": [ "///a/193", "///a/195" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -64.647, "beta": 170.898, "gamma": 56.299, "delta": 75.773, "epsilon": -150.452, "zeta": -77.272, "epsilon_zeta": -73.180, "bb_type": "BI", "chi": -174.220, "glyco_bond": "anti", "C5prime_xyz": [ -1.726, 8.733, 1.276 ], "P_xyz": [ 0.717, 9.446, 1.854 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.232, "theta": -156.188, "eta_prime": -179.456, "theta_prime": -154.804, "eta_base": -131.098, "theta_base": -143.590, "v0": -3.168, "v1": -21.797, "v2": 37.194, "v3": -39.971, "v4": 27.226, "amplitude": 40.403, "phase_angle": 22.991, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.891, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 181.280, 163.296, 326.342 ], "x_axis": [ -0.851, 0.519, 0.083 ], "y_axis": [ -0.254, -0.268, -0.929 ], "z_axis": [ -0.460, -0.812, 0.360 ], "quaternion": [ 0.246, -0.120, -0.553, 0.787 ] } }, { "index": 194, "index_chain": 194, "chain_name": "a", "nt_resnum": 195, "nt_name": "G", "nt_code": "G", "nt_id": "///a/195", "linked_nts": [ "///a/194", "///a/196" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -62.124, "beta": 177.689, "gamma": 52.181, "delta": 74.498, "epsilon": -139.867, "zeta": -91.811, "epsilon_zeta": -48.056, "bb_type": "BI", "chi": -154.956, "glyco_bond": "anti", "C5prime_xyz": [ -1.583, 8.905, 0.168 ], "P_xyz": [ 0.885, 9.759, 0.161 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.352, "theta": -127.344, "eta_prime": 178.224, "theta_prime": -132.598, "eta_base": -163.500, "theta_base": -100.687, "v0": -0.836, "v1": -24.369, "v2": 38.942, "v3": -40.477, "v4": 26.046, "amplitude": 41.371, "phase_angle": 19.732, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.813, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 181.086, 161.477, 329.881 ], "x_axis": [ -0.918, 0.312, -0.245 ], "y_axis": [ 0.026, -0.570, -0.821 ], "z_axis": [ -0.396, -0.760, 0.515 ], "quaternion": [ 0.083, -0.185, -0.456, 0.866 ] } }, { "index": 195, "index_chain": 195, "chain_name": "a", "nt_resnum": 196, "nt_name": "G", "nt_code": "G", "nt_id": "///a/196", "linked_nts": [ "///a/195", "///a/197" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 123.543, "beta": -136.705, "gamma": -161.778, "delta": 79.176, "epsilon": -108.096, "zeta": -91.473, "epsilon_zeta": -16.623, "bb_type": "--", "chi": -175.651, "glyco_bond": "anti", "C5prime_xyz": [ -1.066, 8.385, 1.425 ], "P_xyz": [ 0.071, 10.226, -0.023 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.411, "theta": -167.584, "eta_prime": -177.537, "theta_prime": -160.643, "eta_base": -126.923, "theta_base": -115.671, "v0": 8.038, "v1": -31.282, "v2": 41.459, "v3": -37.821, "v4": 18.823, "amplitude": 41.839, "phase_angle": 7.732, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.064, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 177.203, 160.879, 331.340 ], "x_axis": [ -0.702, 0.063, -0.709 ], "y_axis": [ 0.431, -0.755, -0.494 ], "z_axis": [ -0.566, -0.653, 0.503 ], "quaternion": [ -0.107, -0.371, -0.333, 0.860 ] } }, { "index": 196, "index_chain": 196, "chain_name": "a", "nt_resnum": 197, "nt_name": "G", "nt_code": "G", "nt_id": "///a/197", "linked_nts": [ "///a/196", "///a/198" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -65.705, "beta": 133.713, "gamma": 77.170, "delta": 78.463, "epsilon": -148.993, "zeta": -131.706, "epsilon_zeta": -17.287, "bb_type": "--", "chi": -175.923, "glyco_bond": "anti", "C5prime_xyz": [ -1.201, 8.452, 1.431 ], "P_xyz": [ 1.126, 8.757, 0.295 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.198, "theta": 159.280, "eta_prime": 179.632, "theta_prime": 155.638, "eta_base": -116.382, "theta_base": 148.282, "v0": 6.796, "v1": -30.585, "v2": 41.540, "v3": -38.611, "v4": 20.044, "amplitude": 42.112, "phase_angle": 9.447, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.548, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 173.763, 159.478, 331.475 ], "x_axis": [ -0.263, -0.418, -0.870 ], "y_axis": [ 0.669, -0.728, 0.147 ], "z_axis": [ -0.695, -0.543, 0.471 ], "quaternion": [ -0.346, -0.499, -0.126, 0.785 ] } }, { "index": 197, "index_chain": 197, "chain_name": "a", "nt_resnum": 198, "nt_name": "G", "nt_code": "G", "nt_id": "///a/198", "linked_nts": [ "///a/197", "///a/199" ], "nt_type": "RNA", "dbn": ".", "summary": "non-canonical,multiplet", "alpha": -53.635, "beta": 166.086, "gamma": 31.999, "delta": 81.496, "epsilon": -125.713, "zeta": -85.982, "epsilon_zeta": -39.731, "bb_type": "--", "chi": 176.634, "glyco_bond": "--", "C5prime_xyz": [ -0.906, 8.101, 1.861 ], "P_xyz": [ 1.516, 7.679, 2.762 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.278, "theta": -135.593, "eta_prime": 157.618, "theta_prime": -127.375, "eta_base": 139.363, "theta_base": -88.590, "v0": 10.032, "v1": -31.264, "v2": 39.580, "v3": -34.804, "v4": 15.610, "amplitude": 39.691, "phase_angle": 4.281, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "7a", "suiteness": 0.499, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 173.044, 161.644, 338.156 ], "x_axis": [ 0.169, -0.008, -0.986 ], "y_axis": [ 0.551, -0.829, 0.101 ], "z_axis": [ -0.818, -0.560, -0.135 ], "quaternion": [ 0.226, 0.730, 0.186, -0.617 ] } }, { "index": 198, "index_chain": 198, "chain_name": "a", "nt_resnum": 199, "nt_name": "A", "nt_code": "A", "nt_id": "///a/199", "linked_nts": [ "///a/198", "///a/200" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical", "alpha": -47.881, "beta": 152.476, "gamma": 56.501, "delta": 83.942, "epsilon": -133.460, "zeta": -73.259, "epsilon_zeta": -60.201, "bb_type": "BI", "chi": -172.881, "glyco_bond": "anti", "C5prime_xyz": [ -1.192, 8.385, 1.268 ], "P_xyz": [ 1.427, 8.330, 1.106 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.248, "theta": -128.564, "eta_prime": -168.876, "theta_prime": -130.517, "eta_base": -112.070, "theta_base": -97.142, "v0": 7.465, "v1": -28.022, "v2": 36.800, "v3": -33.497, "v4": 16.454, "amplitude": 37.099, "phase_angle": 7.277, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.469, "filter_rmsd": 0.035, "frame": { "rmsd": 0.009, "origin": [ 170.318, 160.730, 335.843 ], "x_axis": [ 0.399, -0.615, -0.680 ], "y_axis": [ 0.242, -0.644, 0.725 ], "z_axis": [ -0.884, -0.454, -0.109 ], "quaternion": [ 0.402, 0.734, -0.127, -0.533 ] } }, { "index": 199, "index_chain": 199, "chain_name": "a", "nt_resnum": 200, "nt_name": "U", "nt_code": "U", "nt_id": "///a/200", "linked_nts": [ "///a/199", "///a/201" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -73.730, "beta": 159.572, "gamma": 71.312, "delta": 80.180, "epsilon": -146.260, "zeta": -80.420, "epsilon_zeta": -65.840, "bb_type": "BI", "chi": -163.162, "glyco_bond": "anti", "C5prime_xyz": [ -1.424, 8.699, 0.697 ], "P_xyz": [ 1.092, 9.107, 0.071 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.307, "theta": -152.026, "eta_prime": -176.912, "theta_prime": -158.010, "eta_base": -118.381, "theta_base": -157.192, "v0": 3.311, "v1": -25.809, "v2": 37.237, "v3": -36.269, "v4": 20.754, "amplitude": 38.325, "phase_angle": 13.684, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.435, "filter_rmsd": 0.111, "frame": { "rmsd": 0.010, "origin": [ 168.573, 158.926, 333.556 ], "x_axis": [ 0.410, -0.909, -0.073 ], "y_axis": [ -0.258, -0.193, 0.947 ], "z_axis": [ -0.875, -0.369, -0.314 ], "quaternion": [ 0.475, 0.692, -0.422, -0.343 ] } }, { "index": 200, "index_chain": 200, "chain_name": "a", "nt_resnum": 201, "nt_name": "C", "nt_code": "C", "nt_id": "///a/201", "linked_nts": [ "///a/200", "///a/202" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -94.721, "beta": 162.261, "gamma": 82.883, "delta": 81.062, "epsilon": -144.752, "zeta": -67.198, "epsilon_zeta": -77.555, "bb_type": "BI", "chi": -160.593, "glyco_bond": "anti", "C5prime_xyz": [ -1.364, 8.761, 0.566 ], "P_xyz": [ 1.064, 9.221, -0.318 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.906, "theta": -102.048, "eta_prime": 169.547, "theta_prime": -112.271, "eta_base": -173.402, "theta_base": -66.105, "v0": 3.021, "v1": -25.221, "v2": 36.569, "v3": -35.801, "v4": 20.658, "amplitude": 37.701, "phase_angle": 14.075, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.012, "filter_rmsd": 0.068, "frame": { "rmsd": 0.009, "origin": [ 166.912, 158.954, 331.297 ], "x_axis": [ 0.384, -0.859, 0.339 ], "y_axis": [ -0.634, 0.022, 0.773 ], "z_axis": [ -0.671, -0.512, -0.537 ], "quaternion": [ 0.466, 0.689, -0.542, -0.121 ] } }, { "index": 201, "index_chain": 201, "chain_name": "a", "nt_resnum": 202, "nt_name": "U", "nt_code": "U", "nt_id": "///a/202", "linked_nts": [ "///a/201", "///a/203" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": 162.052, "beta": -150.034, "gamma": 157.599, "delta": 80.324, "epsilon": -145.523, "zeta": -55.998, "epsilon_zeta": -89.526, "bb_type": "BI", "chi": -167.522, "glyco_bond": "anti", "C5prime_xyz": [ -1.293, 8.599, 0.970 ], "P_xyz": [ 0.542, 9.604, -0.611 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 144.454, "theta": -139.281, "eta_prime": -178.830, "theta_prime": 166.019, "eta_base": -99.304, "theta_base": 79.752, "v0": 4.998, "v1": -27.612, "v2": 38.494, "v3": -36.529, "v4": 19.852, "amplitude": 39.261, "phase_angle": 11.346, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.268, "filter_rmsd": 0.108, "frame": { "rmsd": 0.008, "origin": [ 166.312, 153.860, 333.088 ], "x_axis": [ -0.255, -0.369, 0.894 ], "y_axis": [ -0.851, 0.525, -0.026 ], "z_axis": [ -0.459, -0.767, -0.448 ], "quaternion": [ -0.453, -0.409, 0.746, -0.266 ] } }, { "index": 202, "index_chain": 202, "chain_name": "a", "nt_resnum": 203, "nt_name": "U", "nt_code": "U", "nt_id": "///a/203", "linked_nts": [ "///a/202", "///a/204" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn", "alpha": -176.810, "beta": 111.778, "gamma": 46.942, "delta": 83.989, "epsilon": -99.924, "zeta": -148.905, "epsilon_zeta": 48.980, "bb_type": "--", "chi": 74.727, "glyco_bond": "syn", "C5prime_xyz": [ -4.807, 4.673, 2.432 ], "P_xyz": [ -3.259, 2.719, 3.276 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 20.522, "theta": -104.124, "eta_prime": 44.380, "theta_prime": -119.222, "eta_base": 33.509, "theta_base": -157.120, "v0": 2.091, "v1": -21.959, "v2": 32.359, "v3": -32.175, "v4": 18.956, "amplitude": 33.534, "phase_angle": 15.212, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.187, "filter_rmsd": 0.116, "frame": { "rmsd": 0.017, "origin": [ 160.218, 159.287, 325.644 ], "x_axis": [ -0.571, 0.420, -0.705 ], "y_axis": [ -0.067, -0.880, -0.470 ], "z_axis": [ -0.818, -0.221, 0.531 ], "quaternion": [ 0.141, -0.441, -0.200, 0.863 ] } }, { "index": 203, "index_chain": 203, "chain_name": "a", "nt_resnum": 204, "nt_name": "C", "nt_code": "C", "nt_id": "///a/204", "linked_nts": [ "///a/203", "///a/205" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-stack", "alpha": -158.999, "beta": -104.638, "gamma": -61.786, "delta": 80.888, "epsilon": -149.982, "zeta": 152.297, "epsilon_zeta": 57.721, "bb_type": "--", "chi": 48.353, "glyco_bond": "syn", "C5prime_xyz": [ -5.665, 4.492, 1.134 ], "P_xyz": [ -8.112, 5.421, 1.385 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -14.667, "theta": -1.802, "eta_prime": -24.309, "theta_prime": 35.016, "eta_base": -34.355, "theta_base": 43.284, "v0": -8.479, "v1": -13.673, "v2": 29.189, "v3": -34.965, "v4": 27.383, "amplitude": 34.596, "phase_angle": 32.465, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.071, "frame": { "rmsd": 0.010, "origin": [ 173.240, 149.935, 331.383 ], "x_axis": [ 0.775, 0.172, 0.608 ], "y_axis": [ -0.351, 0.918, 0.188 ], "z_axis": [ -0.525, -0.359, 0.772 ], "quaternion": [ 0.931, 0.147, -0.304, 0.140 ] } }, { "index": 204, "index_chain": 204, "chain_name": "a", "nt_resnum": 205, "nt_name": "G", "nt_code": "G", "nt_id": "///a/205", "linked_nts": [ "///a/204", "///a/206" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-canonical,helix-end", "alpha": -113.674, "beta": -137.896, "gamma": 19.076, "delta": 81.004, "epsilon": -148.707, "zeta": 13.348, "epsilon_zeta": 197.946, "bb_type": "--", "chi": 26.428, "glyco_bond": "syn", "C5prime_xyz": [ -5.437, 3.623, -0.264 ], "P_xyz": [ -6.122, 1.749, -1.953 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.056, "theta": -79.812, "eta_prime": 142.768, "theta_prime": -72.937, "eta_base": 160.930, "theta_base": -50.277, "v0": 2.559, "v1": -24.391, "v2": 35.669, "v3": -35.234, "v4": 20.594, "amplitude": 36.883, "phase_angle": 14.738, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 163.269, 158.669, 327.049 ], "x_axis": [ -0.606, 0.774, -0.182 ], "y_axis": [ 0.008, -0.224, -0.975 ], "z_axis": [ -0.795, -0.592, 0.130 ], "quaternion": [ 0.274, -0.349, -0.560, 0.700 ] } }, { "index": 205, "index_chain": 205, "chain_name": "a", "nt_resnum": 206, "nt_name": "G", "nt_code": "G", "nt_id": "///a/206", "linked_nts": [ "///a/205", "///a/207" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -164.871, "beta": 146.402, "gamma": 140.809, "delta": 82.000, "epsilon": -142.771, "zeta": -66.371, "epsilon_zeta": -76.401, "bb_type": "BI", "chi": -170.968, "glyco_bond": "anti", "C5prime_xyz": [ -0.896, 8.395, 1.153 ], "P_xyz": [ 0.391, 10.024, -0.439 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.163, "theta": -161.486, "eta_prime": -159.960, "theta_prime": -158.838, "eta_base": -104.337, "theta_base": -124.656, "v0": 9.871, "v1": -31.193, "v2": 39.561, "v3": -34.855, "v4": 15.834, "amplitude": 39.685, "phase_angle": 4.520, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 165.776, 159.175, 331.351 ], "x_axis": [ 0.580, -0.708, 0.403 ], "y_axis": [ 0.380, -0.202, -0.903 ], "z_axis": [ 0.720, 0.677, 0.152 ], "quaternion": [ 0.618, -0.638, 0.129, -0.440 ] } }, { "index": 206, "index_chain": 206, "chain_name": "a", "nt_resnum": 207, "nt_name": "A", "nt_code": "A", "nt_id": "///a/207", "linked_nts": [ "///a/206", "///a/208" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -72.599, "beta": 165.146, "gamma": 72.446, "delta": 80.424, "epsilon": -142.971, "zeta": -33.140, "epsilon_zeta": -109.831, "bb_type": "BI", "chi": -178.776, "glyco_bond": "anti", "C5prime_xyz": [ -1.315, 8.375, 1.588 ], "P_xyz": [ 1.284, 8.751, 1.481 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.133, "theta": -101.848, "eta_prime": -170.373, "theta_prime": -101.940, "eta_base": -116.643, "theta_base": -52.777, "v0": 5.111, "v1": -27.454, "v2": 38.181, "v3": -36.181, "v4": 19.611, "amplitude": 38.920, "phase_angle": 11.181, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.426, "filter_rmsd": 0.038, "frame": { "rmsd": 0.008, "origin": [ 168.737, 160.194, 333.791 ], "x_axis": [ 0.682, -0.690, -0.242 ], "y_axis": [ -0.054, 0.282, -0.958 ], "z_axis": [ 0.730, 0.666, 0.155 ], "quaternion": [ 0.728, -0.558, 0.334, -0.219 ] } }, { "index": 207, "index_chain": 207, "chain_name": "a", "nt_resnum": 208, "nt_name": "C", "nt_code": "C", "nt_id": "///a/208", "linked_nts": [ "///a/207", "///a/209" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -93.842, "beta": -176.609, "gamma": 68.110, "delta": 79.320, "epsilon": -114.928, "zeta": -101.465, "epsilon_zeta": -13.463, "bb_type": "--", "chi": -162.321, "glyco_bond": "anti", "C5prime_xyz": [ -1.396, 8.823, 0.651 ], "P_xyz": [ 1.171, 9.327, 0.844 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.109, "theta": -146.082, "eta_prime": -164.195, "theta_prime": -141.543, "eta_base": -85.210, "theta_base": -116.479, "v0": -0.829, "v1": -22.217, "v2": 35.591, "v3": -37.045, "v4": 23.842, "amplitude": 37.834, "phase_angle": 19.829, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.060, "filter_rmsd": 0.065, "frame": { "rmsd": 0.005, "origin": [ 174.110, 159.012, 330.890 ], "x_axis": [ 0.157, 0.064, -0.985 ], "y_axis": [ -0.566, 0.823, -0.037 ], "z_axis": [ 0.809, 0.564, 0.166 ], "quaternion": [ 0.733, -0.205, 0.612, 0.215 ] } }, { "index": 208, "index_chain": 208, "chain_name": "a", "nt_resnum": 209, "nt_name": "C", "nt_code": "C", "nt_id": "///a/209", "linked_nts": [ "///a/208", "///a/210" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -51.454, "beta": 147.943, "gamma": 49.868, "delta": 78.256, "epsilon": -145.402, "zeta": -69.846, "epsilon_zeta": -75.556, "bb_type": "BI", "chi": -164.824, "glyco_bond": "anti", "C5prime_xyz": [ -1.467, 8.854, 0.761 ], "P_xyz": [ 1.124, 9.174, 0.793 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.145, "theta": -139.640, "eta_prime": 172.815, "theta_prime": -142.416, "eta_base": -151.922, "theta_base": -118.575, "v0": -2.150, "v1": -21.738, "v2": 36.025, "v3": -38.186, "v4": 25.456, "amplitude": 38.765, "phase_angle": 21.669, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.661, "filter_rmsd": 0.067, "frame": { "rmsd": 0.008, "origin": [ 177.812, 160.849, 330.590 ], "x_axis": [ -0.517, 0.170, -0.839 ], "y_axis": [ -0.559, 0.675, 0.482 ], "z_axis": [ 0.648, 0.718, -0.254 ], "quaternion": [ 0.475, -0.124, 0.782, 0.384 ] } }, { "index": 209, "index_chain": 209, "chain_name": "a", "nt_resnum": 210, "nt_name": "U", "nt_code": "U", "nt_id": "///a/210", "linked_nts": [ "///a/209", "///a/211" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -70.026, "beta": 164.442, "gamma": 62.985, "delta": 76.601, "epsilon": -149.299, "zeta": -78.874, "epsilon_zeta": -70.425, "bb_type": "BI", "chi": -161.093, "glyco_bond": "anti", "C5prime_xyz": [ -1.734, 8.858, 0.526 ], "P_xyz": [ 0.728, 9.667, 0.316 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.910, "theta": -154.341, "eta_prime": 179.012, "theta_prime": -154.564, "eta_base": -138.547, "theta_base": -126.822, "v0": -3.272, "v1": -21.468, "v2": 36.690, "v3": -39.480, "v4": 26.979, "amplitude": 39.900, "phase_angle": 23.142, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.786, "filter_rmsd": 0.097, "frame": { "rmsd": 0.011, "origin": [ 179.781, 161.954, 328.431 ], "x_axis": [ -0.768, 0.440, -0.465 ], "y_axis": [ -0.123, 0.612, 0.782 ], "z_axis": [ 0.628, 0.657, -0.416 ], "quaternion": [ 0.327, 0.095, 0.836, 0.430 ] } }, { "index": 210, "index_chain": 210, "chain_name": "a", "nt_resnum": 211, "nt_name": "C", "nt_code": "C", "nt_id": "///a/211", "linked_nts": [ "///a/210", "///a/212" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -60.185, "beta": 163.250, "gamma": 56.359, "delta": 79.071, "epsilon": -140.315, "zeta": -84.027, "epsilon_zeta": -56.289, "bb_type": "BI", "chi": -156.164, "glyco_bond": "anti", "C5prime_xyz": [ -1.506, 8.862, 0.284 ], "P_xyz": [ 1.057, 9.361, 0.127 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.879, "theta": -151.171, "eta_prime": -179.669, "theta_prime": -151.215, "eta_base": -140.030, "theta_base": -127.215, "v0": -0.383, "v1": -22.993, "v2": 36.371, "v3": -37.494, "v4": 23.901, "amplitude": 38.492, "phase_angle": 19.110, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.867, "filter_rmsd": 0.066, "frame": { "rmsd": 0.008, "origin": [ 180.973, 163.324, 325.980 ], "x_axis": [ -0.763, 0.645, 0.042 ], "y_axis": [ 0.395, 0.414, 0.820 ], "z_axis": [ 0.512, 0.642, -0.570 ], "quaternion": [ 0.142, 0.314, 0.829, 0.441 ] } }, { "index": 211, "index_chain": 211, "chain_name": "a", "nt_resnum": 212, "nt_name": "A", "nt_code": "A", "nt_id": "///a/212", "linked_nts": [ "///a/211", "///a/213" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -65.260, "beta": 156.376, "gamma": 63.147, "delta": 77.065, "epsilon": -131.475, "zeta": -73.543, "epsilon_zeta": -57.932, "bb_type": "BI", "chi": -161.472, "glyco_bond": "anti", "C5prime_xyz": [ -1.382, 8.693, 0.575 ], "P_xyz": [ 1.109, 9.104, -0.036 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.034, "theta": -135.032, "eta_prime": 177.205, "theta_prime": -134.390, "eta_base": -146.019, "theta_base": -100.904, "v0": 3.340, "v1": -27.441, "v2": 39.913, "v3": -39.010, "v4": 22.490, "amplitude": 41.142, "phase_angle": 14.040, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.685, "filter_rmsd": 0.038, "frame": { "rmsd": 0.010, "origin": [ 181.985, 165.741, 323.315 ], "x_axis": [ -0.526, 0.701, 0.482 ], "y_axis": [ 0.750, 0.114, 0.652 ], "z_axis": [ 0.402, 0.704, -0.585 ], "quaternion": [ -0.027, 0.486, 0.746, 0.455 ] } }, { "index": 212, "index_chain": 212, "chain_name": "a", "nt_resnum": 213, "nt_name": "C", "nt_code": "C", "nt_id": "///a/213", "linked_nts": [ "///a/212", "///a/214" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -62.189, "beta": 158.633, "gamma": 69.130, "delta": 76.291, "epsilon": -141.643, "zeta": -70.379, "epsilon_zeta": -71.264, "bb_type": "BI", "chi": -151.612, "glyco_bond": "anti", "C5prime_xyz": [ -1.777, 8.902, -0.032 ], "P_xyz": [ 0.585, 9.562, -0.897 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.790, "theta": -141.200, "eta_prime": -171.449, "theta_prime": -143.345, "eta_base": -120.219, "theta_base": -113.728, "v0": -2.884, "v1": -21.851, "v2": 36.951, "v3": -39.557, "v4": 26.761, "amplitude": 40.026, "phase_angle": 22.605, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.494, "filter_rmsd": 0.061, "frame": { "rmsd": 0.009, "origin": [ 181.008, 169.146, 322.621 ], "x_axis": [ -0.031, 0.597, 0.802 ], "y_axis": [ 0.994, -0.066, 0.088 ], "z_axis": [ 0.105, 0.800, -0.591 ], "quaternion": [ -0.279, 0.638, 0.624, 0.356 ] } }, { "index": 213, "index_chain": 213, "chain_name": "a", "nt_resnum": 214, "nt_name": "G", "nt_code": "G", "nt_id": "///a/214", "linked_nts": [ "///a/213", "///a/215" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -66.874, "beta": 164.114, "gamma": 64.262, "delta": 73.933, "epsilon": -146.741, "zeta": -72.944, "epsilon_zeta": -73.797, "bb_type": "BI", "chi": -158.758, "glyco_bond": "anti", "C5prime_xyz": [ -1.730, 8.868, 0.359 ], "P_xyz": [ 0.661, 9.709, -0.275 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.006, "theta": -149.290, "eta_prime": -179.310, "theta_prime": -147.526, "eta_base": -131.937, "theta_base": -112.651, "v0": -1.049, "v1": -24.740, "v2": 39.708, "v3": -41.293, "v4": 26.712, "amplitude": 42.237, "phase_angle": 19.931, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.683, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 180.829, 173.460, 322.477 ], "x_axis": [ 0.515, 0.310, 0.799 ], "y_axis": [ 0.850, -0.306, -0.429 ], "z_axis": [ 0.112, 0.900, -0.421 ], "quaternion": [ -0.444, 0.749, 0.387, 0.304 ] } }, { "index": 214, "index_chain": 214, "chain_name": "a", "nt_resnum": 215, "nt_name": "C", "nt_code": "C", "nt_id": "///a/215", "linked_nts": [ "///a/214", "///a/216" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -66.785, "beta": 165.727, "gamma": 69.713, "delta": 81.231, "epsilon": -145.773, "zeta": -72.492, "epsilon_zeta": -73.281, "bb_type": "BI", "chi": -152.391, "glyco_bond": "anti", "C5prime_xyz": [ -1.599, 8.865, 0.047 ], "P_xyz": [ 0.895, 9.396, -0.532 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.528, "theta": -142.307, "eta_prime": -169.788, "theta_prime": -143.101, "eta_base": -122.620, "theta_base": -125.822, "v0": -2.196, "v1": -20.396, "v2": 33.952, "v3": -36.096, "v4": 24.186, "amplitude": 36.602, "phase_angle": 21.936, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.511, "filter_rmsd": 0.064, "frame": { "rmsd": 0.010, "origin": [ 181.491, 176.745, 323.502 ], "x_axis": [ 0.893, -0.021, 0.450 ], "y_axis": [ 0.440, -0.183, -0.879 ], "z_axis": [ 0.101, 0.983, -0.153 ], "quaternion": [ 0.624, -0.746, -0.140, -0.185 ] } }, { "index": 215, "index_chain": 215, "chain_name": "a", "nt_resnum": 216, "nt_name": "U", "nt_code": "U", "nt_id": "///a/216", "linked_nts": [ "///a/215", "///a/217" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -63.651, "beta": -175.309, "gamma": 52.282, "delta": 78.987, "epsilon": -159.936, "zeta": -84.993, "epsilon_zeta": -74.944, "bb_type": "BI", "chi": -160.400, "glyco_bond": "anti", "C5prime_xyz": [ -1.795, 8.863, 0.476 ], "P_xyz": [ 0.549, 9.803, 1.159 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.546, "theta": -136.867, "eta_prime": -174.302, "theta_prime": -146.215, "eta_base": -146.239, "theta_base": -126.475, "v0": -6.785, "v1": -16.515, "v2": 32.141, "v3": -37.003, "v4": 27.654, "amplitude": 36.763, "phase_angle": 29.042, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.938, "filter_rmsd": 0.101, "frame": { "rmsd": 0.012, "origin": [ 183.024, 182.476, 324.080 ], "x_axis": [ 0.853, -0.513, 0.097 ], "y_axis": [ -0.122, -0.375, -0.919 ], "z_axis": [ 0.508, 0.772, -0.382 ], "quaternion": [ 0.523, -0.808, 0.197, -0.187 ] } }, { "index": 216, "index_chain": 216, "chain_name": "a", "nt_resnum": 217, "nt_name": "A", "nt_code": "A", "nt_id": "///a/217", "linked_nts": [ "///a/216", "///a/218" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 152.210, "beta": -158.956, "gamma": 168.592, "delta": 80.162, "epsilon": -114.309, "zeta": -76.724, "epsilon_zeta": -37.585, "bb_type": "--", "chi": -176.737, "glyco_bond": "anti", "C5prime_xyz": [ -1.445, 8.472, 1.506 ], "P_xyz": [ 0.346, 10.046, 0.493 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.490, "theta": -145.865, "eta_prime": 166.333, "theta_prime": -140.113, "eta_base": -159.691, "theta_base": -90.317, "v0": 1.619, "v1": -24.614, "v2": 36.936, "v3": -37.044, "v4": 22.314, "amplitude": 38.472, "phase_angle": 16.246, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.681, "filter_rmsd": 0.042, "frame": { "rmsd": 0.014, "origin": [ 185.169, 184.966, 324.783 ], "x_axis": [ 0.542, -0.801, -0.253 ], "y_axis": [ -0.436, -0.011, -0.900 ], "z_axis": [ 0.718, 0.598, -0.356 ], "quaternion": [ 0.542, -0.691, 0.448, -0.168 ] } }, { "index": 217, "index_chain": 217, "chain_name": "a", "nt_resnum": 218, "nt_name": "U", "nt_code": "U", "nt_id": "///a/218", "linked_nts": [ "///a/217", "///a/219" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -65.392, "beta": 153.927, "gamma": 70.847, "delta": 80.460, "epsilon": -137.387, "zeta": -99.028, "epsilon_zeta": -38.360, "bb_type": "BI", "chi": -147.913, "glyco_bond": "anti", "C5prime_xyz": [ -1.730, 8.812, -0.240 ], "P_xyz": [ 0.635, 9.266, -1.219 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.095, "theta": -162.983, "eta_prime": -171.210, "theta_prime": -166.931, "eta_base": -107.453, "theta_base": -168.382, "v0": -3.203, "v1": -19.999, "v2": 34.265, "v3": -37.103, "v4": 25.465, "amplitude": 37.354, "phase_angle": 23.463, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.228, "filter_rmsd": 0.099, "frame": { "rmsd": 0.013, "origin": [ 188.567, 184.246, 323.078 ], "x_axis": [ 0.134, -0.538, -0.833 ], "y_axis": [ -0.414, 0.733, -0.540 ], "z_axis": [ 0.900, 0.417, -0.125 ], "quaternion": [ 0.660, -0.362, 0.657, -0.047 ] } }, { "index": 218, "index_chain": 218, "chain_name": "a", "nt_resnum": 219, "nt_name": "C", "nt_code": "C", "nt_id": "///a/219", "linked_nts": [ "///a/218", "///a/220" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -60.603, "beta": 153.158, "gamma": 55.174, "delta": 74.555, "epsilon": -141.905, "zeta": -76.787, "epsilon_zeta": -65.118, "bb_type": "BI", "chi": -149.410, "glyco_bond": "anti", "C5prime_xyz": [ -1.821, 8.901, -0.154 ], "P_xyz": [ 0.592, 9.547, -0.833 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.464, "theta": -147.282, "eta_prime": 167.385, "theta_prime": -148.616, "eta_base": 175.515, "theta_base": -128.439, "v0": -2.566, "v1": -22.659, "v2": 37.966, "v3": -40.432, "v4": 27.123, "amplitude": 40.978, "phase_angle": 22.106, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.408, "filter_rmsd": 0.064, "frame": { "rmsd": 0.010, "origin": [ 192.378, 185.733, 324.492 ], "x_axis": [ -0.136, -0.475, -0.870 ], "y_axis": [ -0.343, 0.846, -0.408 ], "z_axis": [ 0.929, 0.243, -0.278 ], "quaternion": [ 0.598, -0.272, 0.752, -0.055 ] } }, { "index": 219, "index_chain": 219, "chain_name": "a", "nt_resnum": 220, "nt_name": "A", "nt_code": "A", "nt_id": "///a/220", "linked_nts": [ "///a/219", "///a/221" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -61.729, "beta": 162.309, "gamma": 61.479, "delta": 73.641, "epsilon": -146.051, "zeta": -73.158, "epsilon_zeta": -72.893, "bb_type": "BI", "chi": -158.103, "glyco_bond": "anti", "C5prime_xyz": [ -1.957, 8.784, 0.333 ], "P_xyz": [ 0.402, 9.728, -0.264 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.754, "theta": -149.533, "eta_prime": 178.908, "theta_prime": -149.124, "eta_base": -146.459, "theta_base": -120.262, "v0": -0.976, "v1": -24.757, "v2": 39.715, "v3": -41.298, "v4": 26.669, "amplitude": 42.230, "phase_angle": 19.875, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.693, "filter_rmsd": 0.040, "frame": { "rmsd": 0.017, "origin": [ 196.004, 185.115, 322.472 ], "x_axis": [ -0.462, -0.108, -0.881 ], "y_axis": [ -0.198, 0.980, -0.016 ], "z_axis": [ 0.865, 0.167, -0.474 ], "quaternion": [ 0.511, -0.090, 0.854, 0.044 ] } }, { "index": 220, "index_chain": 220, "chain_name": "a", "nt_resnum": 221, "nt_name": "G", "nt_code": "G", "nt_id": "///a/221", "linked_nts": [ "///a/220", "///a/222" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -64.004, "beta": 165.839, "gamma": 66.473, "delta": 76.506, "epsilon": -140.616, "zeta": -116.445, "epsilon_zeta": -24.171, "bb_type": "--", "chi": -162.798, "glyco_bond": "anti", "C5prime_xyz": [ -1.684, 8.821, 0.658 ], "P_xyz": [ 0.789, 9.607, 0.372 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.411, "theta": -138.811, "eta_prime": -172.760, "theta_prime": -141.702, "eta_base": -130.946, "theta_base": -103.791, "v0": -1.803, "v1": -22.679, "v2": 37.179, "v3": -39.250, "v4": 25.862, "amplitude": 39.861, "phase_angle": 21.137, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.612, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 198.151, 184.252, 318.927 ], "x_axis": [ -0.637, 0.429, -0.641 ], "y_axis": [ 0.158, 0.886, 0.436 ], "z_axis": [ 0.755, 0.176, -0.632 ], "quaternion": [ 0.393, 0.165, 0.888, 0.172 ] } }, { "index": 221, "index_chain": 221, "chain_name": "a", "nt_resnum": 222, "nt_name": "A", "nt_code": "A", "nt_id": "///a/222", "linked_nts": [ "///a/221", "///a/223" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 138.603, "beta": -115.377, "gamma": 168.869, "delta": 77.948, "epsilon": -114.215, "zeta": -79.666, "epsilon_zeta": -34.549, "bb_type": "--", "chi": -166.423, "glyco_bond": "anti", "C5prime_xyz": [ -1.304, 8.529, 0.921 ], "P_xyz": [ 0.185, 9.116, -1.124 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.330, "theta": -134.345, "eta_prime": 178.400, "theta_prime": -138.563, "eta_base": -127.021, "theta_base": -103.535, "v0": 5.391, "v1": -28.478, "v2": 39.778, "v3": -37.695, "v4": 20.307, "amplitude": 40.543, "phase_angle": 11.151, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.018, "origin": [ 198.875, 185.190, 315.772 ], "x_axis": [ -0.408, 0.843, -0.351 ], "y_axis": [ 0.690, 0.536, 0.486 ], "z_axis": [ 0.598, -0.043, -0.800 ], "quaternion": [ 0.286, 0.463, 0.828, 0.134 ] } }, { "index": 222, "index_chain": 222, "chain_name": "a", "nt_resnum": 223, "nt_name": "U", "nt_code": "U", "nt_id": "///a/223", "linked_nts": [ "///a/222", "///a/224" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -54.551, "beta": 162.264, "gamma": 54.077, "delta": 76.105, "epsilon": -142.778, "zeta": -69.767, "epsilon_zeta": -73.011, "bb_type": "BI", "chi": -151.039, "glyco_bond": "anti", "C5prime_xyz": [ -1.790, 8.804, -0.025 ], "P_xyz": [ 0.675, 9.489, -0.414 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.217, "theta": -142.737, "eta_prime": -178.679, "theta_prime": -142.765, "eta_base": -123.350, "theta_base": -109.219, "v0": -1.192, "v1": -23.534, "v2": 38.049, "v3": -39.732, "v4": 25.796, "amplitude": 40.554, "phase_angle": 20.244, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.369, "filter_rmsd": 0.105, "frame": { "rmsd": 0.012, "origin": [ 198.760, 187.703, 312.604 ], "x_axis": [ -0.002, 0.946, 0.325 ], "y_axis": [ 0.929, -0.118, 0.349 ], "z_axis": [ 0.369, 0.302, -0.879 ], "quaternion": [ 0.017, 0.706, 0.664, 0.246 ] } }, { "index": 223, "index_chain": 223, "chain_name": "a", "nt_resnum": 224, "nt_name": "G", "nt_code": "G", "nt_id": "///a/224", "linked_nts": [ "///a/223", "///a/225" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -73.452, "beta": 164.347, "gamma": 69.612, "delta": 74.516, "epsilon": -144.653, "zeta": -65.398, "epsilon_zeta": -79.255, "bb_type": "BI", "chi": -162.015, "glyco_bond": "anti", "C5prime_xyz": [ -1.439, 8.759, 0.597 ], "P_xyz": [ 0.977, 9.395, -0.081 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.267, "theta": -142.046, "eta_prime": 179.796, "theta_prime": -143.687, "eta_base": -128.976, "theta_base": -121.264, "v0": 3.232, "v1": -28.695, "v2": 41.926, "v3": -41.058, "v4": 23.848, "amplitude": 43.273, "phase_angle": 14.337, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.501, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 199.854, 191.200, 310.161 ], "x_axis": [ 0.503, 0.616, 0.607 ], "y_axis": [ 0.768, -0.641, 0.014 ], "z_axis": [ 0.398, 0.459, -0.795 ], "quaternion": [ -0.130, 0.857, 0.403, 0.293 ] } }, { "index": 224, "index_chain": 224, "chain_name": "a", "nt_resnum": 225, "nt_name": "A", "nt_code": "A", "nt_id": "///a/225", "linked_nts": [ "///a/224", "///a/226" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -73.621, "beta": 164.244, "gamma": 78.512, "delta": 73.055, "epsilon": -144.162, "zeta": -82.208, "epsilon_zeta": -61.954, "bb_type": "BI", "chi": -168.694, "glyco_bond": "anti", "C5prime_xyz": [ -1.781, 8.729, 0.945 ], "P_xyz": [ 0.573, 9.728, 0.421 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.049, "theta": -157.969, "eta_prime": -172.057, "theta_prime": -158.274, "eta_base": -130.463, "theta_base": -140.414, "v0": -0.948, "v1": -25.188, "v2": 40.418, "v3": -41.928, "v4": 27.034, "amplitude": 42.951, "phase_angle": 19.774, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.154, "filter_rmsd": 0.041, "frame": { "rmsd": 0.016, "origin": [ 200.680, 194.878, 308.965 ], "x_axis": [ 0.786, 0.196, 0.586 ], "y_axis": [ 0.475, -0.798, -0.370 ], "z_axis": [ 0.395, 0.570, -0.720 ], "quaternion": [ -0.259, 0.909, 0.185, 0.270 ] } }, { "index": 225, "index_chain": 225, "chain_name": "a", "nt_resnum": 226, "nt_name": "G", "nt_code": "G", "nt_id": "///a/226", "linked_nts": [ "///a/225", "///a/227" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -53.242, "beta": 174.321, "gamma": 44.279, "delta": 78.532, "epsilon": -169.179, "zeta": -86.080, "epsilon_zeta": -83.100, "bb_type": "BI", "chi": -161.427, "glyco_bond": "anti", "C5prime_xyz": [ -1.408, 8.819, 0.581 ], "P_xyz": [ 1.055, 9.449, 1.148 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.039, "theta": -136.931, "eta_prime": 177.686, "theta_prime": -137.274, "eta_base": -153.415, "theta_base": -105.141, "v0": -1.993, "v1": -21.727, "v2": 35.815, "v3": -37.914, "v4": 25.246, "amplitude": 38.494, "phase_angle": 21.503, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.642, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 201.253, 198.397, 307.976 ], "x_axis": [ 0.763, -0.392, 0.513 ], "y_axis": [ 0.072, -0.738, -0.671 ], "z_axis": [ 0.642, 0.549, -0.535 ], "quaternion": [ -0.350, 0.871, -0.092, 0.331 ] } }, { "index": 226, "index_chain": 226, "chain_name": "a", "nt_resnum": 227, "nt_name": "C", "nt_code": "C", "nt_id": "///a/227", "linked_nts": [ "///a/226", "///a/228" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 164.150, "beta": -132.939, "gamma": 162.078, "delta": 75.546, "epsilon": -113.252, "zeta": -94.460, "epsilon_zeta": -18.792, "bb_type": "--", "chi": -155.756, "glyco_bond": "anti", "C5prime_xyz": [ -1.633, 8.842, 0.273 ], "P_xyz": [ 0.002, 9.490, -1.631 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.133, "theta": -151.173, "eta_prime": -171.171, "theta_prime": -150.500, "eta_base": -125.860, "theta_base": -129.603, "v0": -1.049, "v1": -23.414, "v2": 37.795, "v3": -39.449, "v4": 25.481, "amplitude": 40.246, "phase_angle": 20.099, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.263, "filter_rmsd": 0.066, "frame": { "rmsd": 0.014, "origin": [ 204.214, 200.197, 308.098 ], "x_axis": [ 0.865, -0.500, -0.024 ], "y_axis": [ -0.144, -0.202, -0.969 ], "z_axis": [ 0.480, 0.842, -0.247 ], "quaternion": [ 0.595, -0.761, 0.212, -0.150 ] } }, { "index": 227, "index_chain": 227, "chain_name": "a", "nt_resnum": 228, "nt_name": "C", "nt_code": "C", "nt_id": "///a/228", "linked_nts": [ "///a/227", "///a/229" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -57.862, "beta": 159.879, "gamma": 56.428, "delta": 77.238, "epsilon": -149.047, "zeta": -80.136, "epsilon_zeta": -68.910, "bb_type": "BI", "chi": -146.163, "glyco_bond": "anti", "C5prime_xyz": [ -1.811, 8.862, -0.333 ], "P_xyz": [ 0.620, 9.470, -0.961 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.678, "theta": -153.876, "eta_prime": 176.555, "theta_prime": -153.500, "eta_base": -152.095, "theta_base": -136.775, "v0": -3.075, "v1": -21.456, "v2": 36.416, "v3": -39.207, "v4": 26.692, "amplitude": 39.554, "phase_angle": 22.976, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.257, "filter_rmsd": 0.066, "frame": { "rmsd": 0.013, "origin": [ 208.066, 202.682, 307.293 ], "x_axis": [ 0.385, -0.855, -0.348 ], "y_axis": [ -0.478, 0.138, -0.868 ], "z_axis": [ 0.790, 0.500, -0.355 ], "quaternion": [ 0.540, -0.633, 0.526, -0.174 ] } }, { "index": 228, "index_chain": 228, "chain_name": "a", "nt_resnum": 229, "nt_name": "U", "nt_code": "U", "nt_id": "///a/229", "linked_nts": [ "///a/228", "///a/230" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -59.089, "beta": 171.257, "gamma": 58.537, "delta": 77.083, "epsilon": -140.592, "zeta": -79.740, "epsilon_zeta": -60.852, "bb_type": "BI", "chi": -154.717, "glyco_bond": "anti", "C5prime_xyz": [ -1.821, 8.803, 0.172 ], "P_xyz": [ 0.635, 9.598, -0.048 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.704, "theta": -147.439, "eta_prime": -175.008, "theta_prime": -145.450, "eta_base": -150.191, "theta_base": -111.829, "v0": -1.002, "v1": -23.451, "v2": 37.638, "v3": -39.200, "v4": 25.361, "amplitude": 40.048, "phase_angle": 19.978, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.855, "filter_rmsd": 0.104, "frame": { "rmsd": 0.011, "origin": [ 212.805, 204.248, 305.904 ], "x_axis": [ -0.019, -0.828, -0.560 ], "y_axis": [ -0.665, 0.429, -0.612 ], "z_axis": [ 0.747, 0.361, -0.559 ], "quaternion": [ 0.461, -0.527, 0.708, -0.088 ] } }, { "index": 229, "index_chain": 229, "chain_name": "a", "nt_resnum": 230, "nt_name": "A", "nt_code": "A", "nt_id": "///a/230", "linked_nts": [ "///a/229", "///a/231" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -53.714, "beta": 168.743, "gamma": 43.419, "delta": 75.030, "epsilon": -135.187, "zeta": -73.832, "epsilon_zeta": -61.355, "bb_type": "BI", "chi": -163.484, "glyco_bond": "anti", "C5prime_xyz": [ -1.454, 8.644, 0.705 ], "P_xyz": [ 1.100, 9.122, 0.894 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.289, "theta": -145.419, "eta_prime": 174.943, "theta_prime": -143.503, "eta_base": -138.555, "theta_base": -117.630, "v0": 3.843, "v1": -28.418, "v2": 41.155, "v3": -39.911, "v4": 22.678, "amplitude": 42.318, "phase_angle": 13.465, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.682, "filter_rmsd": 0.042, "frame": { "rmsd": 0.016, "origin": [ 215.869, 203.728, 302.649 ], "x_axis": [ -0.657, -0.476, -0.585 ], "y_axis": [ -0.518, 0.849, -0.108 ], "z_axis": [ 0.548, 0.232, -0.804 ], "quaternion": [ 0.311, -0.273, 0.910, 0.034 ] } }, { "index": 230, "index_chain": 230, "chain_name": "a", "nt_resnum": 231, "nt_name": "G", "nt_code": "G", "nt_id": "///a/231", "linked_nts": [ "///a/230", "///a/232" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem,multiplet", "alpha": -78.350, "beta": 151.471, "gamma": 88.305, "delta": 75.267, "epsilon": -125.936, "zeta": -82.225, "epsilon_zeta": -43.711, "bb_type": "--", "chi": -178.363, "glyco_bond": "anti", "C5prime_xyz": [ -1.421, 8.485, 1.600 ], "P_xyz": [ 0.895, 9.396, 0.891 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.039, "theta": -148.290, "eta_prime": -175.695, "theta_prime": -149.168, "eta_base": -134.494, "theta_base": -124.361, "v0": 3.976, "v1": -28.293, "v2": 40.766, "v3": -39.434, "v4": 22.337, "amplitude": 41.878, "phase_angle": 13.232, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 217.347, 202.280, 299.152 ], "x_axis": [ -0.896, -0.015, -0.443 ], "y_axis": [ -0.096, 0.982, 0.162 ], "z_axis": [ 0.433, 0.188, -0.882 ], "quaternion": [ 0.226, -0.029, 0.970, 0.090 ] } }, { "index": 231, "index_chain": 231, "chain_name": "a", "nt_resnum": 232, "nt_name": "G", "nt_code": "G", "nt_id": "///a/232", "linked_nts": [ "///a/231", "///a/233" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -70.823, "beta": 156.554, "gamma": 71.715, "delta": 75.424, "epsilon": -131.805, "zeta": -66.351, "epsilon_zeta": -65.455, "bb_type": "BI", "chi": -168.731, "glyco_bond": "anti", "C5prime_xyz": [ -1.528, 8.691, 1.000 ], "P_xyz": [ 0.897, 9.373, 0.371 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.703, "theta": -130.772, "eta_prime": 178.456, "theta_prime": -130.570, "eta_base": -140.424, "theta_base": -94.985, "v0": 2.135, "v1": -27.077, "v2": 40.418, "v3": -40.295, "v4": 24.013, "amplitude": 41.996, "phase_angle": 15.755, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.324, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 217.527, 200.898, 296.014 ], "x_axis": [ -0.818, 0.498, -0.288 ], "y_axis": [ 0.460, 0.867, 0.191 ], "z_axis": [ 0.345, 0.023, -0.938 ], "quaternion": [ 0.166, 0.252, 0.952, 0.056 ] } }, { "index": 232, "index_chain": 232, "chain_name": "a", "nt_resnum": 233, "nt_name": "U", "nt_code": "U", "nt_id": "///a/233", "linked_nts": [ "///a/232", "///a/234" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end,stem-end", "alpha": -71.848, "beta": 173.068, "gamma": 69.014, "delta": 77.101, "epsilon": -119.739, "zeta": -143.069, "epsilon_zeta": 23.330, "bb_type": "--", "chi": -146.695, "glyco_bond": "anti", "C5prime_xyz": [ -2.017, 8.842, -0.336 ], "P_xyz": [ 0.329, 9.749, -1.032 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.895, "theta": 146.601, "eta_prime": -169.386, "theta_prime": -178.053, "eta_base": -119.290, "theta_base": -148.626, "v0": -4.665, "v1": -19.665, "v2": 35.071, "v3": -38.716, "v4": 27.401, "amplitude": 38.805, "phase_angle": 25.341, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.508, "filter_rmsd": 0.100, "frame": { "rmsd": 0.010, "origin": [ 215.366, 201.726, 292.824 ], "x_axis": [ -0.380, 0.925, -0.021 ], "y_axis": [ 0.925, 0.379, -0.016 ], "z_axis": [ -0.007, -0.025, -1.000 ], "quaternion": [ 0.004, 0.557, 0.830, -0.012 ] } }, { "index": 233, "index_chain": 233, "chain_name": "a", "nt_resnum": 234, "nt_name": "C", "nt_code": "C", "nt_id": "///a/234", "linked_nts": [ "///a/233", "///a/235" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -76.641, "beta": -163.629, "gamma": 67.099, "delta": 78.034, "epsilon": -146.739, "zeta": -74.487, "epsilon_zeta": -72.252, "bb_type": "BI", "chi": -157.827, "glyco_bond": "anti", "C5prime_xyz": [ -1.415, 8.817, 0.396 ], "P_xyz": [ 1.145, 9.298, 0.625 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -143.782, "theta": -148.663, "eta_prime": -175.449, "theta_prime": -148.088, "eta_base": 173.221, "theta_base": -129.636, "v0": 1.662, "v1": -25.574, "v2": 38.403, "v3": -38.400, "v4": 23.128, "amplitude": 39.986, "phase_angle": 16.179, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "7a", "suiteness": 0.162, "filter_rmsd": 0.069, "frame": { "rmsd": 0.014, "origin": [ 219.987, 201.599, 280.811 ], "x_axis": [ -0.680, 0.607, 0.410 ], "y_axis": [ 0.507, -0.013, 0.862 ], "z_axis": [ 0.529, 0.794, -0.299 ], "quaternion": [ 0.042, 0.397, 0.701, 0.591 ] } }, { "index": 234, "index_chain": 234, "chain_name": "a", "nt_resnum": 235, "nt_name": "G", "nt_code": "G", "nt_id": "///a/235", "linked_nts": [ "///a/234", "///a/236" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -80.687, "beta": 169.827, "gamma": 69.913, "delta": 76.010, "epsilon": -145.306, "zeta": -67.847, "epsilon_zeta": -77.459, "bb_type": "BI", "chi": -162.020, "glyco_bond": "anti", "C5prime_xyz": [ -1.549, 8.740, 0.591 ], "P_xyz": [ 0.909, 9.413, 0.033 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.341, "theta": -142.894, "eta_prime": 173.791, "theta_prime": -144.360, "eta_base": -154.116, "theta_base": -114.151, "v0": 2.710, "v1": -27.359, "v2": 40.301, "v3": -39.730, "v4": 23.320, "amplitude": 41.701, "phase_angle": 14.890, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.468, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 220.537, 204.662, 278.772 ], "x_axis": [ -0.462, 0.417, 0.783 ], "y_axis": [ 0.807, -0.170, 0.566 ], "z_axis": [ 0.369, 0.893, -0.258 ], "quaternion": [ -0.166, 0.491, 0.623, 0.586 ] } }, { "index": 235, "index_chain": 235, "chain_name": "a", "nt_resnum": 236, "nt_name": "G", "nt_code": "G", "nt_id": "///a/236", "linked_nts": [ "///a/235", "///a/237" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -69.971, "beta": 171.807, "gamma": 62.525, "delta": 75.492, "epsilon": -133.033, "zeta": -75.789, "epsilon_zeta": -57.245, "bb_type": "BI", "chi": -167.482, "glyco_bond": "anti", "C5prime_xyz": [ -1.436, 8.743, 0.901 ], "P_xyz": [ 1.089, 9.413, 0.889 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.804, "theta": -150.064, "eta_prime": -178.512, "theta_prime": -133.465, "eta_base": -131.927, "theta_base": -134.524, "v0": 1.437, "v1": -25.937, "v2": 39.308, "v3": -39.485, "v4": 23.996, "amplitude": 41.022, "phase_angle": 16.618, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.765, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 219.588, 208.467, 279.011 ], "x_axis": [ 0.040, 0.023, 0.999 ], "y_axis": [ 0.954, -0.297, -0.032 ], "z_axis": [ 0.295, 0.955, -0.034 ], "quaternion": [ -0.421, 0.585, 0.417, 0.553 ] } }, { "index": 236, "index_chain": 236, "chain_name": "a", "nt_resnum": 237, "nt_name": "A", "nt_code": "A", "nt_id": "///a/237", "linked_nts": [ "///a/236", "///a/238" ], "nt_type": "RNA", "dbn": ".", "summary": "turn", "alpha": -67.821, "beta": -130.121, "gamma": 54.901, "delta": 145.951, "epsilon": -101.579, "zeta": 80.022, "epsilon_zeta": 178.398, "bb_type": "--", "chi": -64.006, "glyco_bond": "--", "C5prime_xyz": [ -3.470, 6.563, -3.088 ], "P_xyz": [ -1.649, 8.208, -4.008 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -139.135, "theta": 119.164, "eta_prime": -133.067, "theta_prime": 75.880, "eta_base": -146.365, "theta_base": 79.248, "v0": -23.968, "v1": 37.791, "v2": -36.415, "v3": 23.500, "v4": 0.086, "amplitude": 38.487, "phase_angle": 161.112, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1[", "suiteness": 0.818, "filter_rmsd": 0.041, "frame": { "rmsd": 0.016, "origin": [ 219.545, 214.246, 279.216 ], "x_axis": [ 0.090, -0.171, 0.981 ], "y_axis": [ 0.996, 0.013, -0.089 ], "z_axis": [ 0.003, 0.985, 0.172 ], "quaternion": [ 0.565, -0.476, -0.433, -0.517 ] } }, { "index": 237, "index_chain": 237, "chain_name": "a", "nt_resnum": 238, "nt_name": "U", "nt_code": "U", "nt_id": "///a/238", "linked_nts": [ "///a/237", "///a/239" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix", "alpha": 61.465, "beta": -177.214, "gamma": 48.115, "delta": 143.146, "epsilon": -129.388, "zeta": 72.634, "epsilon_zeta": 157.978, "bb_type": "--", "chi": -139.620, "glyco_bond": "anti", "C5prime_xyz": [ -2.244, 8.766, -0.326 ], "P_xyz": [ -0.446, 9.988, 1.126 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -17.447, "theta": 93.595, "eta_prime": -7.387, "theta_prime": 54.559, "eta_base": -8.221, "theta_base": -18.064, "v0": -26.173, "v1": 38.768, "v2": -35.924, "v3": 21.798, "v4": 2.437, "amplitude": 38.857, "phase_angle": 157.597, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "6p", "suiteness": 0.810, "filter_rmsd": 0.100, "frame": { "rmsd": 0.013, "origin": [ 229.633, 211.976, 263.843 ], "x_axis": [ 0.810, 0.579, -0.089 ], "y_axis": [ -0.248, 0.475, 0.844 ], "z_axis": [ 0.531, -0.662, 0.529 ], "quaternion": [ 0.839, 0.449, 0.185, 0.247 ] } }, { "index": 238, "index_chain": 238, "chain_name": "a", "nt_resnum": 239, "nt_name": "U", "nt_code": "U", "nt_id": "///a/239", "linked_nts": [ "///a/238", "///a/240" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": 47.435, "beta": 136.446, "gamma": 113.453, "delta": 78.413, "epsilon": -146.622, "zeta": -84.353, "epsilon_zeta": -62.269, "bb_type": "BI", "chi": -161.606, "glyco_bond": "anti", "C5prime_xyz": [ -1.588, 8.795, 0.615 ], "P_xyz": [ -0.108, 9.841, -1.310 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -16.037, "theta": -173.683, "eta_prime": -0.537, "theta_prime": -163.328, "eta_base": 77.565, "theta_base": -164.350, "v0": -1.266, "v1": -22.418, "v2": 36.130, "v3": -37.791, "v4": 24.626, "amplitude": 38.538, "phase_angle": 20.360, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.102, "frame": { "rmsd": 0.010, "origin": [ 218.929, 211.111, 279.860 ], "x_axis": [ 0.879, -0.154, 0.451 ], "y_axis": [ 0.468, 0.098, -0.878 ], "z_axis": [ 0.091, 0.983, 0.158 ], "quaternion": [ 0.731, -0.637, -0.123, -0.213 ] } }, { "index": 239, "index_chain": 239, "chain_name": "a", "nt_resnum": 240, "nt_name": "A", "nt_code": "A", "nt_id": "///a/240", "linked_nts": [ "///a/239", "///a/241" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,helix-end,multiplet", "alpha": -70.906, "beta": -151.025, "gamma": 73.560, "delta": 145.726, "epsilon": -91.198, "zeta": 172.818, "epsilon_zeta": 95.984, "bb_type": "BII", "chi": -111.008, "glyco_bond": "anti", "C5prime_xyz": [ -2.820, 8.293, -1.694 ], "P_xyz": [ -0.742, 9.844, -1.267 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -133.855, "theta": 169.586, "eta_prime": -127.136, "theta_prime": 150.650, "eta_base": -142.315, "theta_base": 160.624, "v0": -28.477, "v1": 41.741, "v2": -38.228, "v3": 22.817, "v4": 3.249, "amplitude": 41.620, "phase_angle": 156.708, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1[", "suiteness": 0.372, "filter_rmsd": 0.041, "frame": { "rmsd": 0.017, "origin": [ 217.491, 218.017, 282.529 ], "x_axis": [ 0.773, -0.511, 0.376 ], "y_axis": [ 0.401, -0.065, -0.914 ], "z_axis": [ 0.491, 0.857, 0.155 ], "quaternion": [ 0.682, -0.649, 0.042, -0.334 ] } }, { "index": 240, "index_chain": 240, "chain_name": "a", "nt_resnum": 241, "nt_name": "G", "nt_code": "G", "nt_id": "///a/241", "linked_nts": [ "///a/240", "///a/242" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix-end,stem-end,multiplet", "alpha": -93.037, "beta": 73.645, "gamma": 171.024, "delta": 78.714, "epsilon": -150.102, "zeta": -72.354, "epsilon_zeta": -77.748, "bb_type": "BI", "chi": -173.024, "glyco_bond": "anti", "C5prime_xyz": [ -1.563, 8.680, 1.245 ], "P_xyz": [ -2.365, 10.454, -0.517 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -95.127, "theta": 140.806, "eta_prime": -124.350, "theta_prime": 166.960, "eta_base": -114.642, "theta_base": -154.245, "v0": -0.592, "v1": -23.177, "v2": 36.715, "v3": -38.066, "v4": 24.365, "amplitude": 38.931, "phase_angle": 19.424, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 210.460, 221.695, 283.001 ], "x_axis": [ -0.273, 0.960, 0.069 ], "y_axis": [ 0.398, 0.177, -0.900 ], "z_axis": [ -0.876, -0.218, -0.430 ], "quaternion": [ -0.344, 0.495, 0.686, -0.408 ] } }, { "index": 241, "index_chain": 241, "chain_name": "a", "nt_resnum": 242, "nt_name": "C", "nt_code": "C", "nt_id": "///a/242", "linked_nts": [ "///a/241", "///a/243" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -77.544, "beta": 175.195, "gamma": 64.998, "delta": 82.202, "epsilon": -147.785, "zeta": -68.556, "epsilon_zeta": -79.229, "bb_type": "BI", "chi": -161.999, "glyco_bond": "anti", "C5prime_xyz": [ -1.335, 8.764, 0.636 ], "P_xyz": [ 1.261, 9.136, 0.629 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.532, "theta": -139.326, "eta_prime": -178.986, "theta_prime": -140.089, "eta_base": -135.878, "theta_base": -122.740, "v0": 0.947, "v1": -23.168, "v2": 35.301, "v3": -35.651, "v4": 21.885, "amplitude": 36.934, "phase_angle": 17.098, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.695, "filter_rmsd": 0.065, "frame": { "rmsd": 0.010, "origin": [ 207.093, 221.593, 283.204 ], "x_axis": [ 0.004, 0.878, -0.478 ], "y_axis": [ 0.378, -0.444, -0.813 ], "z_axis": [ -0.926, -0.177, -0.333 ], "quaternion": [ -0.238, 0.667, 0.471, -0.526 ] } }, { "index": 242, "index_chain": 242, "chain_name": "a", "nt_resnum": 243, "nt_name": "U", "nt_code": "U", "nt_id": "///a/243", "linked_nts": [ "///a/242", "///a/244" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -71.180, "beta": 177.236, "gamma": 61.238, "delta": 79.139, "epsilon": -142.020, "zeta": -49.879, "epsilon_zeta": -92.140, "bb_type": "BI", "chi": -154.786, "glyco_bond": "anti", "C5prime_xyz": [ -1.789, 8.858, 0.163 ], "P_xyz": [ 0.672, 9.745, 0.148 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.642, "theta": -136.489, "eta_prime": -175.277, "theta_prime": -145.784, "eta_base": -144.739, "theta_base": -130.255, "v0": -3.401, "v1": -19.805, "v2": 34.138, "v3": -37.028, "v4": 25.532, "amplitude": 37.286, "phase_angle": 23.716, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.870, "filter_rmsd": 0.101, "frame": { "rmsd": 0.010, "origin": [ 203.147, 222.569, 282.909 ], "x_axis": [ 0.313, 0.582, -0.751 ], "y_axis": [ 0.254, -0.813, -0.525 ], "z_axis": [ -0.915, -0.027, -0.402 ], "quaternion": [ -0.157, 0.795, 0.263, -0.524 ] } }, { "index": 243, "index_chain": 243, "chain_name": "a", "nt_resnum": 244, "nt_name": "A", "nt_code": "A", "nt_id": "///a/244", "linked_nts": [ "///a/243", "///a/245" ], "nt_type": "RNA", "dbn": ".", "summary": "", "alpha": -150.531, "beta": 106.271, "gamma": -169.126, "delta": 146.695, "epsilon": -143.859, "zeta": -163.128, "epsilon_zeta": 19.269, "bb_type": "--", "chi": -12.702, "glyco_bond": "--", "C5prime_xyz": [ -5.050, 5.075, -2.143 ], "P_xyz": [ -7.511, 4.202, -2.078 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -134.093, "theta": 84.357, "eta_prime": -144.611, "theta_prime": 107.539, "eta_base": -136.009, "theta_base": 146.484, "v0": -24.917, "v1": 38.442, "v2": -36.459, "v3": 23.060, "v4": 0.964, "amplitude": 38.846, "phase_angle": 159.810, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.044, "frame": { "rmsd": 0.016, "origin": [ 200.404, 222.997, 281.662 ], "x_axis": [ -0.496, 0.867, 0.047 ], "y_axis": [ -0.867, -0.497, 0.027 ], "z_axis": [ 0.047, -0.027, 0.999 ], "quaternion": [ 0.501, 0.027, -0.000, 0.865 ] } }, { "index": 244, "index_chain": 244, "chain_name": "a", "nt_resnum": 245, "nt_name": "G", "nt_code": "G", "nt_id": "///a/245", "linked_nts": [ "///a/244", "///a/246" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,BII,non-canonical,multiplet", "alpha": -106.498, "beta": 109.178, "gamma": -178.079, "delta": 147.652, "epsilon": -94.101, "zeta": 128.850, "epsilon_zeta": 137.048, "bb_type": "BII", "chi": -42.880, "glyco_bond": "--", "C5prime_xyz": [ -4.021, 5.842, -3.042 ], "P_xyz": [ -6.014, 4.676, -4.296 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -53.026, "theta": 85.789, "eta_prime": -93.419, "theta_prime": 72.120, "eta_base": -97.839, "theta_base": 64.075, "v0": -24.409, "v1": 38.234, "v2": -36.700, "v3": 23.494, "v4": 0.391, "amplitude": 38.884, "phase_angle": 160.707, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "4s", "suiteness": 0.147, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 191.063, 218.323, 288.841 ], "x_axis": [ -0.751, -0.238, 0.616 ], "y_axis": [ 0.266, -0.963, -0.047 ], "z_axis": [ 0.604, 0.128, 0.786 ], "quaternion": [ -0.135, 0.326, 0.022, 0.935 ] } }, { "index": 245, "index_chain": 245, "chain_name": "a", "nt_resnum": 246, "nt_name": "U", "nt_code": "U", "nt_id": "///a/246", "linked_nts": [ "///a/245", "///a/247" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix-end,stem-end,multiplet", "alpha": 37.639, "beta": -164.446, "gamma": 178.312, "delta": 82.781, "epsilon": -109.993, "zeta": -87.424, "epsilon_zeta": -22.569, "bb_type": "--", "chi": -167.659, "glyco_bond": "anti", "C5prime_xyz": [ -1.713, 8.799, 0.911 ], "P_xyz": [ -0.245, 10.578, -0.307 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 112.798, "theta": -154.458, "eta_prime": 91.084, "theta_prime": -149.181, "eta_base": 99.095, "theta_base": -111.279, "v0": -5.278, "v1": -16.712, "v2": 30.961, "v3": -34.837, "v4": 25.308, "amplitude": 34.772, "phase_angle": 27.076, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "6n", "suiteness": 0.043, "filter_rmsd": 0.104, "frame": { "rmsd": 0.010, "origin": [ 196.687, 221.793, 284.793 ], "x_axis": [ -0.995, -0.053, 0.084 ], "y_axis": [ 0.058, -0.996, 0.060 ], "z_axis": [ 0.080, 0.065, 0.995 ], "quaternion": [ -0.028, 0.041, 0.031, 0.998 ] } }, { "index": 246, "index_chain": 246, "chain_name": "a", "nt_resnum": 247, "nt_name": "U", "nt_code": "U", "nt_id": "///a/247", "linked_nts": [ "///a/246", "///a/248" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-stack,canonical,non-canonical,helix,stem,multiplet", "alpha": -59.502, "beta": 169.366, "gamma": 27.888, "delta": 78.243, "epsilon": -170.261, "zeta": -93.276, "epsilon_zeta": -76.985, "bb_type": "BI", "chi": -165.540, "glyco_bond": "anti", "C5prime_xyz": [ -1.400, 8.670, 0.866 ], "P_xyz": [ 1.008, 9.123, 1.764 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 138.340, "theta": -148.624, "eta_prime": 157.380, "theta_prime": -151.733, "eta_base": -150.344, "theta_base": -138.122, "v0": 2.049, "v1": -25.758, "v2": 38.653, "v3": -38.383, "v4": 22.852, "amplitude": 40.150, "phase_angle": 15.695, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.038, "filter_rmsd": 0.109, "frame": { "rmsd": 0.013, "origin": [ 195.040, 221.489, 289.577 ], "x_axis": [ -0.548, -0.563, -0.619 ], "y_axis": [ 0.780, -0.611, -0.136 ], "z_axis": [ -0.302, -0.557, 0.774 ], "quaternion": [ -0.392, -0.269, -0.202, 0.856 ] } }, { "index": 247, "index_chain": 247, "chain_name": "a", "nt_resnum": 248, "nt_name": "G", "nt_code": "G", "nt_id": "///a/248", "linked_nts": [ "///a/247", "///a/249" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 163.738, "beta": -142.248, "gamma": 163.168, "delta": 80.340, "epsilon": -137.042, "zeta": -72.943, "epsilon_zeta": -64.099, "bb_type": "BI", "chi": 178.295, "glyco_bond": "anti", "C5prime_xyz": [ -1.260, 8.375, 1.770 ], "P_xyz": [ 0.842, 9.485, 0.709 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.434, "theta": -147.989, "eta_prime": 175.628, "theta_prime": -150.241, "eta_base": -156.006, "theta_base": -132.130, "v0": 3.566, "v1": -25.847, "v2": 37.223, "v3": -36.119, "v4": 20.497, "amplitude": 38.258, "phase_angle": 13.358, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.322, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 192.500, 221.659, 291.866 ], "x_axis": [ -0.184, -0.762, -0.621 ], "y_axis": [ 0.884, -0.405, 0.234 ], "z_axis": [ -0.430, -0.506, 0.748 ], "quaternion": [ 0.538, 0.344, 0.089, -0.764 ] } }, { "index": 248, "index_chain": 248, "chain_name": "a", "nt_resnum": 249, "nt_name": "G", "nt_code": "G", "nt_id": "///a/249", "linked_nts": [ "///a/248", "///a/250" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -62.869, "beta": 173.501, "gamma": 58.256, "delta": 78.614, "epsilon": -142.188, "zeta": -74.677, "epsilon_zeta": -67.510, "bb_type": "BI", "chi": -166.990, "glyco_bond": "anti", "C5prime_xyz": [ -1.820, 8.807, 0.860 ], "P_xyz": [ 0.634, 9.576, 1.265 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.977, "theta": -144.279, "eta_prime": -173.424, "theta_prime": -142.792, "eta_base": -139.845, "theta_base": -109.738, "v0": -4.138, "v1": -19.979, "v2": 35.077, "v3": -38.381, "v4": 26.872, "amplitude": 38.577, "phase_angle": 24.594, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.897, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 188.926, 220.464, 293.019 ], "x_axis": [ 0.297, -0.844, -0.446 ], "y_axis": [ 0.836, 0.004, 0.549 ], "z_axis": [ -0.461, -0.536, 0.707 ], "quaternion": [ 0.709, 0.383, -0.005, -0.593 ] } }, { "index": 249, "index_chain": 249, "chain_name": "a", "nt_resnum": 250, "nt_name": "U", "nt_code": "U", "nt_id": "///a/250", "linked_nts": [ "///a/249", "///a/251" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -63.018, "beta": 164.939, "gamma": 56.917, "delta": 78.190, "epsilon": -147.617, "zeta": -73.720, "epsilon_zeta": -73.897, "bb_type": "BI", "chi": -151.837, "glyco_bond": "anti", "C5prime_xyz": [ -1.791, 8.843, -0.002 ], "P_xyz": [ 0.675, 9.610, -0.370 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.260, "theta": -148.084, "eta_prime": -179.268, "theta_prime": -150.564, "eta_base": -132.543, "theta_base": -130.607, "v0": -2.536, "v1": -21.178, "v2": 35.499, "v3": -37.912, "v4": 25.514, "amplitude": 38.366, "phase_angle": 22.288, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.918, "filter_rmsd": 0.101, "frame": { "rmsd": 0.010, "origin": [ 187.157, 217.892, 293.643 ], "x_axis": [ 0.708, -0.704, -0.059 ], "y_axis": [ 0.409, 0.340, 0.847 ], "z_axis": [ -0.576, -0.624, 0.529 ], "quaternion": [ 0.803, 0.458, -0.161, -0.347 ] } }, { "index": 250, "index_chain": 250, "chain_name": "a", "nt_resnum": 251, "nt_name": "G", "nt_code": "G", "nt_id": "///a/251", "linked_nts": [ "///a/250", "///a/252" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -71.601, "beta": 169.116, "gamma": 55.699, "delta": 78.231, "epsilon": -148.282, "zeta": -68.864, "epsilon_zeta": -79.418, "bb_type": "BI", "chi": -164.957, "glyco_bond": "anti", "C5prime_xyz": [ -1.856, 8.836, 0.723 ], "P_xyz": [ 0.596, 9.696, 0.979 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.524, "theta": -144.990, "eta_prime": 170.913, "theta_prime": -145.237, "eta_base": -155.046, "theta_base": -105.629, "v0": -4.328, "v1": -19.635, "v2": 34.647, "v3": -38.104, "v4": 26.813, "amplitude": 38.213, "phase_angle": 24.950, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.924, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 185.498, 214.792, 294.235 ], "x_axis": [ 0.990, -0.119, 0.077 ], "y_axis": [ 0.011, 0.607, 0.795 ], "z_axis": [ -0.142, -0.786, 0.602 ], "quaternion": [ 0.894, 0.442, -0.061, -0.037 ] } }, { "index": 251, "index_chain": 251, "chain_name": "a", "nt_resnum": 252, "nt_name": "G", "nt_code": "G", "nt_id": "///a/252", "linked_nts": [ "///a/251", "///a/253" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -83.247, "beta": 169.220, "gamma": 68.252, "delta": 78.635, "epsilon": -151.103, "zeta": -69.297, "epsilon_zeta": -81.806, "bb_type": "BI", "chi": -175.103, "glyco_bond": "anti", "C5prime_xyz": [ -1.468, 8.619, 1.372 ], "P_xyz": [ 1.082, 9.146, 1.511 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.927, "theta": -148.004, "eta_prime": 175.093, "theta_prime": -148.578, "eta_base": -126.947, "theta_base": -133.990, "v0": 1.570, "v1": -25.168, "v2": 37.803, "v3": -37.893, "v4": 22.873, "amplitude": 39.386, "phase_angle": 16.303, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.500, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 186.841, 211.413, 295.925 ], "x_axis": [ 0.755, 0.490, 0.436 ], "y_axis": [ -0.655, 0.549, 0.518 ], "z_axis": [ 0.014, -0.677, 0.736 ], "quaternion": [ 0.872, 0.343, -0.121, 0.328 ] } }, { "index": 252, "index_chain": 252, "chain_name": "a", "nt_resnum": 253, "nt_name": "G", "nt_code": "G", "nt_id": "///a/253", "linked_nts": [ "///a/252", "///a/254" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -81.291, "beta": 159.410, "gamma": 94.668, "delta": 80.017, "epsilon": -141.809, "zeta": -57.968, "epsilon_zeta": -83.841, "bb_type": "BI", "chi": -175.942, "glyco_bond": "anti", "C5prime_xyz": [ -1.534, 8.621, 1.401 ], "P_xyz": [ 0.840, 9.516, 0.773 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -177.651, "theta": -131.145, "eta_prime": -161.902, "theta_prime": -132.359, "eta_base": -131.111, "theta_base": -78.836, "v0": -0.876, "v1": -22.235, "v2": 35.520, "v3": -37.005, "v4": 23.885, "amplitude": 37.771, "phase_angle": 19.881, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 188.656, 207.546, 297.239 ], "x_axis": [ 0.403, 0.434, 0.806 ], "y_axis": [ -0.908, 0.297, 0.295 ], "z_axis": [ -0.111, -0.851, 0.514 ], "quaternion": [ 0.744, 0.385, -0.308, 0.451 ] } }, { "index": 253, "index_chain": 253, "chain_name": "a", "nt_resnum": 254, "nt_name": "G", "nt_code": "G", "nt_id": "///a/254", "linked_nts": [ "///a/253", "///a/255" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -82.870, "beta": 174.308, "gamma": 65.122, "delta": 81.511, "epsilon": -134.166, "zeta": -88.286, "epsilon_zeta": -45.880, "bb_type": "BI", "chi": -155.413, "glyco_bond": "anti", "C5prime_xyz": [ -1.359, 8.738, 0.214 ], "P_xyz": [ 1.203, 9.104, -0.152 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.306, "theta": -147.618, "eta_prime": -175.116, "theta_prime": -146.653, "eta_base": -100.068, "theta_base": -142.315, "v0": 2.975, "v1": -25.464, "v2": 37.040, "v3": -36.301, "v4": 21.040, "amplitude": 38.212, "phase_angle": 14.226, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.565, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 189.247, 206.737, 301.285 ], "x_axis": [ -0.503, 0.405, 0.764 ], "y_axis": [ -0.855, -0.364, -0.370 ], "z_axis": [ 0.128, -0.839, 0.530 ], "quaternion": [ 0.407, 0.288, -0.390, 0.774 ] } }, { "index": 254, "index_chain": 254, "chain_name": "a", "nt_resnum": 255, "nt_name": "U", "nt_code": "U", "nt_id": "///a/255", "linked_nts": [ "///a/254", "///a/256" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -60.004, "beta": 161.799, "gamma": 57.895, "delta": 81.610, "epsilon": -146.645, "zeta": -66.669, "epsilon_zeta": -79.976, "bb_type": "BI", "chi": -148.841, "glyco_bond": "anti", "C5prime_xyz": [ -1.952, 8.859, -0.209 ], "P_xyz": [ 0.512, 9.631, -0.544 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.364, "theta": -102.826, "eta_prime": -179.145, "theta_prime": -146.587, "eta_base": -165.498, "theta_base": 140.012, "v0": -6.726, "v1": -16.122, "v2": 31.320, "v3": -36.117, "v4": 27.081, "amplitude": 35.868, "phase_angle": 29.168, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.701, "filter_rmsd": 0.101, "frame": { "rmsd": 0.014, "origin": [ 190.931, 204.494, 303.719 ], "x_axis": [ -0.755, 0.534, 0.380 ], "y_axis": [ -0.655, -0.587, -0.476 ], "z_axis": [ -0.031, -0.608, 0.793 ], "quaternion": [ 0.336, 0.099, -0.306, 0.885 ] } }, { "index": 255, "index_chain": 255, "chain_name": "a", "nt_resnum": 256, "nt_name": "A", "nt_code": "A", "nt_id": "///a/256", "linked_nts": [ "///a/255", "///a/257" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn", "alpha": 109.014, "beta": 155.533, "gamma": 108.895, "delta": 79.008, "epsilon": -116.908, "zeta": -65.936, "epsilon_zeta": -50.972, "bb_type": "--", "chi": -5.714, "glyco_bond": "syn", "C5prime_xyz": [ -5.402, 4.537, -1.769 ], "P_xyz": [ -6.391, 2.159, -1.361 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 19.002, "theta": -126.669, "eta_prime": 44.269, "theta_prime": -123.839, "eta_base": 28.147, "theta_base": -147.382, "v0": -6.527, "v1": -17.541, "v2": 33.452, "v3": -38.225, "v4": 28.148, "amplitude": 37.981, "phase_angle": 28.267, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.045, "frame": { "rmsd": 0.019, "origin": [ 194.705, 194.650, 301.429 ], "x_axis": [ 0.970, 0.139, 0.201 ], "y_axis": [ -0.233, 0.273, 0.933 ], "z_axis": [ 0.075, -0.952, 0.297 ], "quaternion": [ 0.797, 0.591, -0.040, 0.117 ] } }, { "index": 256, "index_chain": 256, "chain_name": "a", "nt_resnum": 257, "nt_name": "A", "nt_code": "A", "nt_id": "///a/257", "linked_nts": [ "///a/256", "///a/258" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -72.828, "beta": 172.212, "gamma": 58.957, "delta": 83.208, "epsilon": -137.908, "zeta": -104.248, "epsilon_zeta": -33.661, "bb_type": "BI", "chi": -124.130, "glyco_bond": "anti", "C5prime_xyz": [ -1.851, 8.444, -1.513 ], "P_xyz": [ 0.552, 8.826, -2.454 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.447, "theta": -168.986, "eta_prime": -175.831, "theta_prime": -165.880, "eta_base": 176.388, "theta_base": -155.405, "v0": -0.660, "v1": -21.052, "v2": 33.425, "v3": -34.743, "v4": 22.385, "amplitude": 35.492, "phase_angle": 19.652, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.460, "filter_rmsd": 0.043, "frame": { "rmsd": 0.018, "origin": [ 196.697, 197.588, 301.618 ], "x_axis": [ -0.566, -0.171, -0.806 ], "y_axis": [ -0.738, 0.542, 0.403 ], "z_axis": [ 0.368, 0.823, -0.433 ], "quaternion": [ 0.368, -0.285, 0.797, 0.385 ] } }, { "index": 257, "index_chain": 257, "chain_name": "a", "nt_resnum": 258, "nt_name": "A", "nt_code": "A", "nt_id": "///a/258", "linked_nts": [ "///a/257", "///a/259" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -86.123, "beta": 172.394, "gamma": 58.097, "delta": 83.236, "epsilon": -145.070, "zeta": -59.476, "epsilon_zeta": -85.593, "bb_type": "BI", "chi": -168.721, "glyco_bond": "anti", "C5prime_xyz": [ -1.286, 8.569, 1.009 ], "P_xyz": [ 1.302, 8.857, 1.244 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.860, "theta": -126.912, "eta_prime": 158.547, "theta_prime": -125.097, "eta_base": 172.001, "theta_base": -83.371, "v0": 3.026, "v1": -24.633, "v2": 35.648, "v3": -34.791, "v4": 20.050, "amplitude": 36.725, "phase_angle": 13.915, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.246, "filter_rmsd": 0.040, "frame": { "rmsd": 0.010, "origin": [ 198.500, 204.163, 299.741 ], "x_axis": [ -0.534, -0.815, -0.226 ], "y_axis": [ -0.577, 0.156, 0.802 ], "z_axis": [ -0.618, 0.559, -0.553 ], "quaternion": [ -0.131, -0.465, 0.749, 0.454 ] } }, { "index": 258, "index_chain": 258, "chain_name": "a", "nt_resnum": 259, "nt_name": "G", "nt_code": "G", "nt_id": "///a/259", "linked_nts": [ "///a/258", "///a/260" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -78.659, "beta": 178.527, "gamma": 66.247, "delta": 81.836, "epsilon": -132.121, "zeta": -130.675, "epsilon_zeta": -1.447, "bb_type": "--", "chi": -153.878, "glyco_bond": "anti", "C5prime_xyz": [ -1.282, 8.790, 0.123 ], "P_xyz": [ 1.297, 9.157, -0.168 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.774, "theta": -145.552, "eta_prime": -168.573, "theta_prime": -155.336, "eta_base": -109.204, "theta_base": -170.273, "v0": 0.732, "v1": -22.903, "v2": 35.148, "v3": -35.628, "v4": 22.057, "amplitude": 36.848, "phase_angle": 17.472, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.613, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 194.921, 203.506, 297.140 ], "x_axis": [ -0.810, -0.390, 0.439 ], "y_axis": [ -0.061, 0.799, 0.598 ], "z_axis": [ -0.584, 0.457, -0.671 ], "quaternion": [ -0.282, -0.124, 0.906, 0.291 ] } }, { "index": 259, "index_chain": 259, "chain_name": "a", "nt_resnum": 260, "nt_name": "G", "nt_code": "G", "nt_id": "///a/260", "linked_nts": [ "///a/259", "///a/261" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,BI", "alpha": 27.188, "beta": 101.315, "gamma": 173.942, "delta": 78.016, "epsilon": 145.272, "zeta": -78.949, "epsilon_zeta": -135.779, "bb_type": "BI", "chi": -48.509, "glyco_bond": "--", "C5prime_xyz": [ -3.602, 5.256, -3.426 ], "P_xyz": [ -6.032, 4.597, -4.132 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 9.826, "theta": 89.236, "eta_prime": -11.317, "theta_prime": 83.176, "eta_base": -26.877, "theta_base": 46.124, "v0": 3.784, "v1": -24.753, "v2": 35.167, "v3": -33.938, "v4": 19.260, "amplitude": 36.069, "phase_angle": 12.836, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 192.933, 217.781, 291.297 ], "x_axis": [ 0.629, 0.356, -0.691 ], "y_axis": [ 0.450, -0.892, -0.050 ], "z_axis": [ -0.634, -0.280, -0.721 ], "quaternion": [ 0.064, 0.900, 0.224, -0.368 ] } }, { "index": 260, "index_chain": 260, "chain_name": "a", "nt_resnum": 261, "nt_name": "C", "nt_code": "C", "nt_id": "///a/261", "linked_nts": [ "///a/260", "///a/262" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI,canonical,helix,stem-end", "alpha": -159.474, "beta": 177.010, "gamma": 44.274, "delta": 80.825, "epsilon": -143.690, "zeta": -65.678, "epsilon_zeta": -78.013, "bb_type": "BI", "chi": -160.375, "glyco_bond": "anti", "C5prime_xyz": [ -1.519, 8.879, 0.505 ], "P_xyz": [ 0.890, 9.622, 1.198 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 74.327, "theta": -137.503, "eta_prime": 62.349, "theta_prime": -133.421, "eta_base": 81.801, "theta_base": -99.296, "v0": -3.007, "v1": -19.662, "v2": 33.465, "v3": -36.073, "v4": 24.690, "amplitude": 36.405, "phase_angle": 23.184, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.063, "frame": { "rmsd": 0.011, "origin": [ 188.374, 208.006, 297.934 ], "x_axis": [ 0.243, 0.836, 0.493 ], "y_axis": [ 0.922, -0.041, -0.384 ], "z_axis": [ -0.301, 0.548, -0.781 ], "quaternion": [ -0.324, 0.718, 0.612, 0.067 ] } }, { "index": 261, "index_chain": 261, "chain_name": "a", "nt_resnum": 262, "nt_name": "C", "nt_code": "C", "nt_id": "///a/262", "linked_nts": [ "///a/261", "///a/263" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -76.871, "beta": 174.257, "gamma": 64.767, "delta": 80.002, "epsilon": -147.200, "zeta": -69.033, "epsilon_zeta": -78.167, "bb_type": "BI", "chi": -154.836, "glyco_bond": "anti", "C5prime_xyz": [ -1.675, 8.907, 0.154 ], "P_xyz": [ 0.815, 9.673, -0.046 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.541, "theta": -144.293, "eta_prime": -175.951, "theta_prime": -146.804, "eta_base": -129.556, "theta_base": -120.189, "v0": -4.563, "v1": -18.749, "v2": 33.519, "v3": -37.035, "v4": 26.259, "amplitude": 37.123, "phase_angle": 25.456, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.710, "filter_rmsd": 0.059, "frame": { "rmsd": 0.012, "origin": [ 187.206, 211.923, 296.201 ], "x_axis": [ 0.802, 0.531, 0.275 ], "y_axis": [ 0.560, -0.507, -0.655 ], "z_axis": [ -0.208, 0.679, -0.704 ], "quaternion": [ -0.384, 0.868, 0.314, 0.019 ] } }, { "index": 262, "index_chain": 262, "chain_name": "a", "nt_resnum": 263, "nt_name": "U", "nt_code": "U", "nt_id": "///a/263", "linked_nts": [ "///a/262", "///a/264" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -94.515, "beta": 160.594, "gamma": 85.219, "delta": 77.337, "epsilon": -135.495, "zeta": -91.850, "epsilon_zeta": -43.645, "bb_type": "BI", "chi": -146.989, "glyco_bond": "anti", "C5prime_xyz": [ -1.803, 8.830, -0.283 ], "P_xyz": [ 0.325, 9.434, -1.673 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.298, "theta": -159.265, "eta_prime": 175.676, "theta_prime": -161.370, "eta_base": -143.891, "theta_base": -142.210, "v0": -2.054, "v1": -21.984, "v2": 36.315, "v3": -38.436, "v4": 25.565, "amplitude": 39.036, "phase_angle": 21.520, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.010, "filter_rmsd": 0.103, "frame": { "rmsd": 0.009, "origin": [ 187.064, 214.357, 295.444 ], "x_axis": [ 0.973, 0.229, -0.025 ], "y_axis": [ 0.067, -0.382, -0.922 ], "z_axis": [ -0.220, 0.895, -0.387 ], "quaternion": [ 0.549, -0.828, -0.089, 0.074 ] } }, { "index": 263, "index_chain": 263, "chain_name": "a", "nt_resnum": 264, "nt_name": "A", "nt_code": "A", "nt_id": "///a/264", "linked_nts": [ "///a/263", "///a/265" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -65.487, "beta": 156.769, "gamma": 58.531, "delta": 78.528, "epsilon": -123.197, "zeta": -131.561, "epsilon_zeta": 8.364, "bb_type": "--", "chi": -162.083, "glyco_bond": "anti", "C5prime_xyz": [ -1.469, 8.683, 0.583 ], "P_xyz": [ 1.065, 9.103, 0.122 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.847, "theta": -137.104, "eta_prime": 172.403, "theta_prime": -140.822, "eta_base": -159.316, "theta_base": -114.703, "v0": 1.866, "v1": -25.445, "v2": 38.069, "v3": -37.975, "v4": 22.765, "amplitude": 39.589, "phase_angle": 15.924, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.598, "filter_rmsd": 0.039, "frame": { "rmsd": 0.015, "origin": [ 186.922, 218.401, 294.148 ], "x_axis": [ 0.914, -0.334, -0.230 ], "y_axis": [ -0.366, -0.439, -0.820 ], "z_axis": [ 0.173, 0.834, -0.524 ], "quaternion": [ -0.488, 0.848, -0.206, -0.017 ] } }, { "index": 264, "index_chain": 264, "chain_name": "a", "nt_resnum": 265, "nt_name": "C", "nt_code": "C", "nt_id": "///a/265", "linked_nts": [ "///a/264", "///a/266" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 117.689, "beta": -100.840, "gamma": -177.680, "delta": 79.883, "epsilon": 163.983, "zeta": 78.120, "epsilon_zeta": 85.863, "bb_type": "--", "chi": -164.496, "glyco_bond": "anti", "C5prime_xyz": [ -1.262, 8.738, 0.796 ], "P_xyz": [ -0.057, 9.227, -1.477 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.160, "theta": -91.730, "eta_prime": -165.352, "theta_prime": -132.054, "eta_base": -122.177, "theta_base": -111.481, "v0": 0.996, "v1": -22.775, "v2": 34.576, "v3": -34.937, "v4": 21.518, "amplitude": 36.170, "phase_angle": 17.073, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.067, "frame": { "rmsd": 0.011, "origin": [ 188.843, 220.131, 293.384 ], "x_axis": [ 0.693, -0.495, -0.524 ], "y_axis": [ -0.571, 0.067, -0.818 ], "z_axis": [ 0.440, 0.866, -0.236 ], "quaternion": [ 0.617, -0.682, 0.391, 0.031 ] } }, { "index": 265, "index_chain": 265, "chain_name": "a", "nt_resnum": 266, "nt_name": "C", "nt_code": "C", "nt_id": "///a/266", "linked_nts": [ "///a/265", "///a/267" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -74.590, "beta": -75.045, "gamma": -121.060, "delta": 86.109, "epsilon": -122.672, "zeta": -73.866, "epsilon_zeta": -48.806, "bb_type": "--", "chi": -171.655, "glyco_bond": "anti", "C5prime_xyz": [ -0.856, 8.349, 1.311 ], "P_xyz": [ -1.251, 10.686, 0.108 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 131.364, "theta": 169.391, "eta_prime": 152.364, "theta_prime": -172.472, "eta_base": -159.389, "theta_base": -134.034, "v0": 10.356, "v1": -29.862, "v2": 37.220, "v3": -32.143, "v4": 13.771, "amplitude": 37.266, "phase_angle": 2.847, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.081, "frame": { "rmsd": 0.022, "origin": [ 193.415, 221.904, 291.632 ], "x_axis": [ 0.028, -0.679, -0.734 ], "y_axis": [ -0.889, 0.318, -0.329 ], "z_axis": [ 0.457, 0.662, -0.595 ], "quaternion": [ 0.433, -0.571, 0.687, 0.121 ] } }, { "index": 266, "index_chain": 266, "chain_name": "a", "nt_resnum": 267, "nt_name": "A", "nt_code": "A", "nt_id": "///a/267", "linked_nts": [ "///a/266", "///a/268" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -60.977, "beta": 163.112, "gamma": 52.659, "delta": 75.682, "epsilon": -139.518, "zeta": -75.629, "epsilon_zeta": -63.889, "bb_type": "BI", "chi": -156.595, "glyco_bond": "anti", "C5prime_xyz": [ -1.801, 8.782, 0.270 ], "P_xyz": [ 0.670, 9.550, -0.054 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.602, "theta": -143.596, "eta_prime": 176.481, "theta_prime": -134.311, "eta_base": -136.576, "theta_base": -98.782, "v0": 0.386, "v1": -25.360, "v2": 39.407, "v3": -40.235, "v4": 25.067, "amplitude": 41.450, "phase_angle": 18.064, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.584, "filter_rmsd": 0.038, "frame": { "rmsd": 0.014, "origin": [ 195.636, 222.009, 289.466 ], "x_axis": [ -0.502, -0.457, -0.734 ], "y_axis": [ -0.633, 0.773, -0.048 ], "z_axis": [ 0.590, 0.440, -0.677 ], "quaternion": [ 0.385, -0.317, 0.859, 0.114 ] } }, { "index": 267, "index_chain": 267, "chain_name": "a", "nt_resnum": 268, "nt_name": "A", "nt_code": "A", "nt_id": "///a/268", "linked_nts": [ "///a/267", "///a/269" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,canonical,helix-end,stem-end,multiplet", "alpha": -57.034, "beta": 163.800, "gamma": 86.444, "delta": 144.501, "epsilon": -97.605, "zeta": 140.786, "epsilon_zeta": 121.608, "bb_type": "BII", "chi": -103.188, "glyco_bond": "anti", "C5prime_xyz": [ -2.782, 8.093, -1.966 ], "P_xyz": [ -0.469, 8.661, -3.061 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -140.603, "theta": 170.613, "eta_prime": -115.271, "theta_prime": 149.346, "eta_base": -86.448, "theta_base": -162.690, "v0": -26.562, "v1": 39.164, "v2": -36.041, "v3": 21.676, "v4": 2.835, "amplitude": 39.129, "phase_angle": 157.088, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.076, "filter_rmsd": 0.038, "frame": { "rmsd": 0.015, "origin": [ 195.899, 221.823, 286.034 ], "x_axis": [ -0.777, -0.034, -0.628 ], "y_axis": [ 0.030, 0.995, -0.092 ], "z_axis": [ 0.628, -0.090, -0.773 ], "quaternion": [ 0.334, -0.001, 0.941, -0.048 ] } }, { "index": 268, "index_chain": 268, "chain_name": "a", "nt_resnum": 269, "nt_name": "G", "nt_code": "G", "nt_id": "///a/269", "linked_nts": [ "///a/268", "///a/270" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end,stem-end", "alpha": 67.174, "beta": -112.331, "gamma": -163.383, "delta": 83.851, "epsilon": -120.903, "zeta": -81.095, "epsilon_zeta": -39.808, "bb_type": "--", "chi": 175.193, "glyco_bond": "anti", "C5prime_xyz": [ -0.998, 8.103, 1.970 ], "P_xyz": [ 0.386, 9.704, 0.432 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -168.942, "theta": -157.527, "eta_prime": -173.729, "theta_prime": -152.899, "eta_base": -118.637, "theta_base": -118.958, "v0": 8.865, "v1": -29.545, "v2": 37.967, "v3": -33.781, "v4": 15.780, "amplitude": 38.140, "phase_angle": 5.451, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "0i", "suiteness": 0.098, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 202.787, 220.877, 284.533 ], "x_axis": [ 0.269, 0.454, -0.849 ], "y_axis": [ -0.186, 0.890, 0.417 ], "z_axis": [ 0.945, 0.045, 0.324 ], "quaternion": [ 0.788, 0.118, 0.569, 0.203 ] } }, { "index": 269, "index_chain": 269, "chain_name": "a", "nt_resnum": 270, "nt_name": "G", "nt_code": "G", "nt_id": "///a/270", "linked_nts": [ "///a/269", "///a/271" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -51.990, "beta": 165.428, "gamma": 50.169, "delta": 80.728, "epsilon": -132.672, "zeta": -83.309, "epsilon_zeta": -49.363, "bb_type": "BI", "chi": -168.735, "glyco_bond": "anti", "C5prime_xyz": [ -1.291, 8.621, 1.049 ], "P_xyz": [ 1.290, 8.875, 1.315 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.197, "theta": -142.020, "eta_prime": -172.808, "theta_prime": -139.320, "eta_base": -124.138, "theta_base": -114.458, "v0": 3.592, "v1": -26.340, "v2": 37.829, "v3": -36.732, "v4": 20.899, "amplitude": 38.885, "phase_angle": 13.382, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.518, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 207.105, 220.774, 283.644 ], "x_axis": [ 0.043, 0.932, -0.360 ], "y_axis": [ -0.345, 0.353, 0.870 ], "z_axis": [ 0.938, 0.086, 0.336 ], "quaternion": [ 0.658, 0.298, 0.493, 0.485 ] } }, { "index": 270, "index_chain": 270, "chain_name": "a", "nt_resnum": 271, "nt_name": "C", "nt_code": "C", "nt_id": "///a/271", "linked_nts": [ "///a/270", "///a/272" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end,multiplet", "alpha": -61.424, "beta": 155.374, "gamma": 65.415, "delta": 76.283, "epsilon": -137.839, "zeta": -68.226, "epsilon_zeta": -69.613, "bb_type": "BI", "chi": -148.728, "glyco_bond": "anti", "C5prime_xyz": [ -1.724, 8.855, -0.173 ], "P_xyz": [ 0.651, 9.319, -1.158 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.803, "theta": -134.640, "eta_prime": -177.156, "theta_prime": -137.399, "eta_base": -137.897, "theta_base": -111.839, "v0": 0.994, "v1": -25.275, "v2": 38.696, "v3": -39.064, "v4": 23.939, "amplitude": 40.495, "phase_angle": 17.142, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.582, "filter_rmsd": 0.069, "frame": { "rmsd": 0.012, "origin": [ 209.857, 221.482, 282.868 ], "x_axis": [ -0.007, 0.994, 0.109 ], "y_axis": [ 0.023, -0.108, 0.994 ], "z_axis": [ 1.000, 0.009, -0.023 ], "quaternion": [ 0.464, 0.530, 0.480, 0.523 ] } }, { "index": 271, "index_chain": 271, "chain_name": "a", "nt_resnum": 272, "nt_name": "G", "nt_code": "G", "nt_id": "///a/272", "linked_nts": [ "///a/271", "///a/273" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -70.350, "beta": 179.636, "gamma": 53.640, "delta": 76.873, "epsilon": -150.347, "zeta": -152.046, "epsilon_zeta": 1.699, "bb_type": "--", "chi": -154.460, "glyco_bond": "anti", "C5prime_xyz": [ -1.716, 8.873, 0.118 ], "P_xyz": [ 0.728, 9.784, 0.115 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.311, "theta": 156.990, "eta_prime": 175.418, "theta_prime": 171.057, "eta_base": -142.944, "theta_base": 157.677, "v0": -2.145, "v1": -22.369, "v2": 36.981, "v3": -39.173, "v4": 26.079, "amplitude": 39.770, "phase_angle": 21.585, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.851, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 213.204, 224.377, 282.673 ], "x_axis": [ -0.512, 0.614, 0.601 ], "y_axis": [ 0.113, -0.645, 0.756 ], "z_axis": [ 0.852, 0.455, 0.260 ], "quaternion": [ 0.161, 0.467, 0.389, 0.777 ] } }, { "index": 272, "index_chain": 272, "chain_name": "a", "nt_resnum": 273, "nt_name": "A", "nt_code": "A", "nt_id": "///a/273", "linked_nts": [ "///a/272", "///a/274" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": 36.545, "beta": 153.161, "gamma": -34.901, "delta": 152.003, "epsilon": -117.544, "zeta": 66.616, "epsilon_zeta": 175.840, "bb_type": "--", "chi": -143.142, "glyco_bond": "anti", "C5prime_xyz": [ -1.053, 8.276, 0.242 ], "P_xyz": [ 0.189, 9.283, 2.304 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -165.705, "theta": 83.208, "eta_prime": -176.553, "theta_prime": 35.780, "eta_base": 154.546, "theta_base": -26.392, "v0": -7.102, "v1": 24.818, "v2": -32.018, "v3": 28.767, "v4": -13.870, "amplitude": 32.207, "phase_angle": 186.207, "puckering": "C3'-exo", "sugar_class": "--", "bin": "32m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.038, "frame": { "rmsd": 0.020, "origin": [ 220.450, 222.722, 278.999 ], "x_axis": [ -0.980, -0.100, -0.171 ], "y_axis": [ -0.097, -0.514, 0.853 ], "z_axis": [ -0.173, 0.852, 0.494 ], "quaternion": [ -0.001, -0.100, 0.493, 0.864 ] } }, { "index": 273, "index_chain": 273, "chain_name": "a", "nt_resnum": 274, "nt_name": "C", "nt_code": "C", "nt_id": "///a/274", "linked_nts": [ "///a/273", "///a/275" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": 65.887, "beta": 173.142, "gamma": 76.633, "delta": 146.911, "epsilon": -149.385, "zeta": 41.291, "epsilon_zeta": 169.324, "bb_type": "--", "chi": -145.907, "glyco_bond": "anti", "C5prime_xyz": [ -1.694, 8.749, 0.177 ], "P_xyz": [ 0.764, 9.001, 1.055 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -15.586, "theta": 29.110, "eta_prime": 29.175, "theta_prime": -1.699, "eta_base": 84.851, "theta_base": -5.686, "v0": -20.768, "v1": 35.085, "v2": -35.295, "v3": 24.196, "v4": -2.353, "amplitude": 36.557, "phase_angle": 164.902, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "6p", "suiteness": 0.229, "filter_rmsd": 0.064, "frame": { "rmsd": 0.010, "origin": [ 221.749, 220.669, 296.462 ], "x_axis": [ 0.351, 0.936, -0.003 ], "y_axis": [ 0.407, -0.155, -0.900 ], "z_axis": [ -0.843, 0.315, -0.436 ], "quaternion": [ -0.436, 0.697, 0.482, -0.303 ] } }, { "index": 274, "index_chain": 274, "chain_name": "a", "nt_resnum": 275, "nt_name": "G", "nt_code": "G", "nt_id": "///a/275", "linked_nts": [ "///a/274", "///a/276" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": -116.915, "beta": -152.277, "gamma": 39.304, "delta": 137.217, "epsilon": -129.742, "zeta": 126.485, "epsilon_zeta": 103.773, "bb_type": "--", "chi": -107.169, "glyco_bond": "anti", "C5prime_xyz": [ -2.364, 8.385, -1.931 ], "P_xyz": [ -0.580, 10.261, -1.565 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 151.603, "theta": 103.467, "eta_prime": -167.446, "theta_prime": 101.868, "eta_base": -151.608, "theta_base": 130.153, "v0": -26.574, "v1": 36.134, "v2": -31.386, "v3": 16.879, "v4": 5.926, "amplitude": 35.607, "phase_angle": 151.818, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 225.178, 217.850, 280.488 ], "x_axis": [ 0.909, 0.124, 0.397 ], "y_axis": [ -0.299, -0.470, 0.830 ], "z_axis": [ 0.290, -0.874, -0.391 ], "quaternion": [ 0.512, 0.832, -0.052, 0.207 ] } }, { "index": 275, "index_chain": 275, "chain_name": "a", "nt_resnum": 276, "nt_name": "A", "nt_code": "A", "nt_id": "///a/276", "linked_nts": [ "///a/275", "///a/277" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -86.607, "beta": 150.849, "gamma": 52.266, "delta": 79.448, "epsilon": -142.349, "zeta": -37.437, "epsilon_zeta": -104.911, "bb_type": "BI", "chi": -168.418, "glyco_bond": "anti", "C5prime_xyz": [ -1.558, 8.624, 0.956 ], "P_xyz": [ 1.025, 8.994, 0.819 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.075, "theta": -102.500, "eta_prime": 171.289, "theta_prime": -102.693, "eta_base": -177.648, "theta_base": -47.268, "v0": 1.537, "v1": -25.142, "v2": 37.747, "v3": -37.906, "v4": 22.931, "amplitude": 39.345, "phase_angle": 16.384, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.523, "filter_rmsd": 0.040, "frame": { "rmsd": 0.016, "origin": [ 214.422, 216.789, 278.413 ], "x_axis": [ 0.768, -0.316, -0.557 ], "y_axis": [ 0.389, -0.461, 0.798 ], "z_axis": [ -0.508, -0.830, -0.231 ], "quaternion": [ 0.519, 0.784, 0.023, -0.340 ] } }, { "index": 276, "index_chain": 276, "chain_name": "a", "nt_resnum": 277, "nt_name": "U", "nt_code": "U", "nt_id": "///a/277", "linked_nts": [ "///a/276", "///a/278" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -99.523, "beta": 179.829, "gamma": 73.429, "delta": 82.267, "epsilon": -143.500, "zeta": -59.244, "epsilon_zeta": -84.256, "bb_type": "BI", "chi": -151.370, "glyco_bond": "anti", "C5prime_xyz": [ -1.628, 8.814, -0.032 ], "P_xyz": [ 0.900, 9.382, -0.408 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.212, "theta": -127.510, "eta_prime": -171.278, "theta_prime": -127.864, "eta_base": -87.708, "theta_base": -83.119, "v0": -1.509, "v1": -20.722, "v2": 33.770, "v3": -35.478, "v4": 23.350, "amplitude": 36.140, "phase_angle": 20.865, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.022, "filter_rmsd": 0.105, "frame": { "rmsd": 0.012, "origin": [ 218.562, 212.845, 277.429 ], "x_axis": [ 0.673, -0.439, 0.595 ], "y_axis": [ -0.722, -0.215, 0.657 ], "z_axis": [ -0.161, -0.872, -0.462 ], "quaternion": [ 0.499, 0.766, -0.379, 0.142 ] } }, { "index": 277, "index_chain": 277, "chain_name": "a", "nt_resnum": 278, "nt_name": "C", "nt_code": "C", "nt_id": "///a/278", "linked_nts": [ "///a/277", "///a/279" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -82.435, "beta": 167.677, "gamma": 71.289, "delta": 80.236, "epsilon": -149.075, "zeta": -75.563, "epsilon_zeta": -73.512, "bb_type": "BI", "chi": -159.868, "glyco_bond": "anti", "C5prime_xyz": [ -1.378, 8.830, 0.498 ], "P_xyz": [ 1.170, 9.311, 0.084 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.645, "theta": -148.485, "eta_prime": -175.327, "theta_prime": -150.109, "eta_base": -109.886, "theta_base": -133.240, "v0": -0.073, "v1": -22.675, "v2": 35.486, "v3": -36.398, "v4": 23.056, "amplitude": 37.451, "phase_angle": 18.646, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.393, "filter_rmsd": 0.066, "frame": { "rmsd": 0.010, "origin": [ 219.633, 208.269, 278.873 ], "x_axis": [ -0.111, -0.187, 0.976 ], "y_axis": [ -0.991, 0.092, -0.095 ], "z_axis": [ -0.072, -0.978, -0.195 ], "quaternion": [ -0.443, -0.498, 0.591, -0.454 ] } }, { "index": 278, "index_chain": 278, "chain_name": "a", "nt_resnum": 279, "nt_name": "C", "nt_code": "C", "nt_id": "///a/279", "linked_nts": [ "///a/278", "///a/280" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -71.523, "beta": 169.809, "gamma": 65.203, "delta": 80.407, "epsilon": -142.275, "zeta": -72.012, "epsilon_zeta": -70.264, "bb_type": "BI", "chi": -142.676, "glyco_bond": "anti", "C5prime_xyz": [ -1.583, 8.831, -0.541 ], "P_xyz": [ 0.892, 9.312, -1.252 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.964, "theta": -140.171, "eta_prime": -177.907, "theta_prime": -141.459, "eta_base": -148.984, "theta_base": -115.254, "v0": -1.601, "v1": -21.055, "v2": 34.355, "v3": -36.173, "v4": 23.835, "amplitude": 36.796, "phase_angle": 20.984, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.738, "filter_rmsd": 0.068, "frame": { "rmsd": 0.013, "origin": [ 220.708, 205.571, 278.913 ], "x_axis": [ -0.534, -0.156, 0.831 ], "y_axis": [ -0.817, -0.159, -0.554 ], "z_axis": [ 0.219, -0.975, -0.042 ], "quaternion": [ 0.257, 0.409, -0.595, 0.642 ] } }, { "index": 279, "index_chain": 279, "chain_name": "a", "nt_resnum": 280, "nt_name": "G", "nt_code": "G", "nt_id": "///a/280", "linked_nts": [ "///a/279", "///a/281" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -68.544, "beta": 171.640, "gamma": 53.355, "delta": 78.740, "epsilon": -141.642, "zeta": -72.523, "epsilon_zeta": -69.119, "bb_type": "BI", "chi": -161.760, "glyco_bond": "anti", "C5prime_xyz": [ -1.640, 8.771, 0.581 ], "P_xyz": [ 0.868, 9.483, 0.702 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.491, "theta": -145.708, "eta_prime": 175.498, "theta_prime": -143.907, "eta_base": -143.930, "theta_base": -107.907, "v0": 0.315, "v1": -23.972, "v2": 37.099, "v3": -37.922, "v4": 23.720, "amplitude": 39.034, "phase_angle": 18.116, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.965, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 220.317, 201.237, 280.586 ], "x_axis": [ -0.874, 0.331, 0.356 ], "y_axis": [ -0.374, 0.009, -0.927 ], "z_axis": [ -0.310, -0.944, 0.116 ], "quaternion": [ 0.250, 0.016, -0.664, 0.704 ] } }, { "index": 280, "index_chain": 280, "chain_name": "a", "nt_resnum": 281, "nt_name": "U", "nt_code": "U", "nt_id": "///a/281", "linked_nts": [ "///a/280", "///a/282" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -87.085, "beta": 152.897, "gamma": 91.750, "delta": 80.969, "epsilon": -137.320, "zeta": -76.903, "epsilon_zeta": -60.416, "bb_type": "BI", "chi": -148.474, "glyco_bond": "anti", "C5prime_xyz": [ -1.601, 8.756, -0.168 ], "P_xyz": [ 0.434, 9.164, -1.756 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.038, "theta": -143.433, "eta_prime": -173.090, "theta_prime": -148.529, "eta_base": -123.983, "theta_base": -128.562, "v0": 1.250, "v1": -23.767, "v2": 36.022, "v3": -36.226, "v4": 22.125, "amplitude": 37.615, "phase_angle": 16.734, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.109, "frame": { "rmsd": 0.013, "origin": [ 218.604, 199.605, 282.132 ], "x_axis": [ -0.983, 0.146, -0.109 ], "y_axis": [ 0.013, -0.537, -0.843 ], "z_axis": [ -0.181, -0.831, 0.527 ], "quaternion": [ 0.038, -0.083, -0.479, 0.873 ] } }, { "index": 281, "index_chain": 281, "chain_name": "a", "nt_resnum": 282, "nt_name": "A", "nt_code": "A", "nt_id": "///a/282", "linked_nts": [ "///a/281", "///a/283" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -57.796, "beta": 165.970, "gamma": 50.995, "delta": 75.120, "epsilon": -162.988, "zeta": -85.592, "epsilon_zeta": -77.396, "bb_type": "BI", "chi": -163.054, "glyco_bond": "anti", "C5prime_xyz": [ -1.848, 8.748, 0.629 ], "P_xyz": [ 0.598, 9.633, 0.711 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.758, "theta": -133.115, "eta_prime": 177.693, "theta_prime": -151.195, "eta_base": -143.715, "theta_base": -174.145, "v0": -1.531, "v1": -23.564, "v2": 38.357, "v3": -40.228, "v4": 26.341, "amplitude": 40.996, "phase_angle": 20.669, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.825, "filter_rmsd": 0.038, "frame": { "rmsd": 0.018, "origin": [ 215.879, 196.553, 284.631 ], "x_axis": [ -0.697, 0.217, -0.683 ], "y_axis": [ 0.542, -0.465, -0.700 ], "z_axis": [ -0.469, -0.859, 0.206 ], "quaternion": [ -0.106, -0.374, -0.506, 0.769 ] } }, { "index": 282, "index_chain": 282, "chain_name": "a", "nt_resnum": 283, "nt_name": "A", "nt_code": "A", "nt_id": "///a/283", "linked_nts": [ "///a/282", "///a/284" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 154.608, "beta": -134.757, "gamma": -67.734, "delta": 88.012, "epsilon": -174.055, "zeta": -88.324, "epsilon_zeta": -85.731, "bb_type": "BI", "chi": -163.315, "glyco_bond": "anti", "C5prime_xyz": [ -0.953, 8.366, 0.772 ], "P_xyz": [ -0.576, 10.842, 1.467 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -58.810, "theta": 169.412, "eta_prime": -58.974, "theta_prime": -176.096, "eta_base": -66.291, "theta_base": -155.850, "v0": 10.422, "v1": -29.510, "v2": 36.308, "v3": -31.225, "v4": 13.270, "amplitude": 36.338, "phase_angle": 2.338, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.042, "frame": { "rmsd": 0.022, "origin": [ 215.392, 187.234, 292.964 ], "x_axis": [ 0.095, -0.992, -0.077 ], "y_axis": [ 0.253, 0.099, -0.962 ], "z_axis": [ 0.963, 0.072, 0.261 ], "quaternion": [ 0.603, -0.429, 0.431, -0.516 ] } }, { "index": 283, "index_chain": 283, "chain_name": "a", "nt_resnum": 284, "nt_name": "C", "nt_code": "C", "nt_id": "///a/284", "linked_nts": [ "///a/283", "///a/285" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 176.995, "beta": -138.116, "gamma": 149.308, "delta": 77.453, "epsilon": -128.865, "zeta": -71.812, "epsilon_zeta": -57.053, "bb_type": "BI", "chi": -156.896, "glyco_bond": "anti", "C5prime_xyz": [ -1.503, 8.770, 0.342 ], "P_xyz": [ 0.387, 9.263, -1.382 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.931, "theta": -133.564, "eta_prime": 179.290, "theta_prime": -137.110, "eta_base": -160.836, "theta_base": -106.159, "v0": 2.733, "v1": -26.253, "v2": 38.643, "v3": -38.015, "v4": 22.172, "amplitude": 39.950, "phase_angle": 14.700, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.010, "filter_rmsd": 0.070, "frame": { "rmsd": 0.018, "origin": [ 217.094, 187.537, 295.733 ], "x_axis": [ 0.418, -0.865, -0.279 ], "y_axis": [ 0.515, 0.478, -0.712 ], "z_axis": [ 0.749, 0.154, 0.645 ], "quaternion": [ 0.797, -0.272, 0.322, -0.433 ] } }, { "index": 284, "index_chain": 284, "chain_name": "a", "nt_resnum": 285, "nt_name": "U", "nt_code": "U", "nt_id": "///a/285", "linked_nts": [ "///a/284", "///a/286" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -65.982, "beta": 171.506, "gamma": 63.957, "delta": 76.671, "epsilon": -150.388, "zeta": -79.958, "epsilon_zeta": -70.430, "bb_type": "BI", "chi": -152.110, "glyco_bond": "anti", "C5prime_xyz": [ -1.707, 8.831, 0.020 ], "P_xyz": [ 0.767, 9.541, -0.465 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.252, "theta": -155.800, "eta_prime": -175.300, "theta_prime": -155.668, "eta_base": -125.098, "theta_base": -135.544, "v0": -0.763, "v1": -23.830, "v2": 38.070, "v3": -39.312, "v4": 25.292, "amplitude": 40.391, "phase_angle": 19.520, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.654, "filter_rmsd": 0.103, "frame": { "rmsd": 0.021, "origin": [ 221.004, 184.964, 296.837 ], "x_axis": [ 0.401, -0.336, -0.852 ], "y_axis": [ 0.253, 0.935, -0.250 ], "z_axis": [ 0.880, -0.115, 0.460 ], "quaternion": [ 0.836, -0.040, 0.518, -0.176 ] } }, { "index": 285, "index_chain": 285, "chain_name": "a", "nt_resnum": 286, "nt_name": "G", "nt_code": "G", "nt_id": "///a/286", "linked_nts": [ "///a/285", "///a/287" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -59.711, "beta": 173.747, "gamma": 54.872, "delta": 81.635, "epsilon": -169.989, "zeta": 28.421, "epsilon_zeta": 161.589, "bb_type": "--", "chi": -160.920, "glyco_bond": "anti", "C5prime_xyz": [ -1.345, 8.813, 0.551 ], "P_xyz": [ 1.197, 9.314, 0.887 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.701, "theta": -76.807, "eta_prime": -177.128, "theta_prime": -82.411, "eta_base": -146.658, "theta_base": -54.529, "v0": -2.651, "v1": -19.700, "v2": 33.120, "v3": -35.538, "v4": 24.119, "amplitude": 35.897, "phase_angle": 22.685, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.886, "filter_rmsd": 0.027, "frame": { "rmsd": 0.027, "origin": [ 224.469, 183.030, 298.233 ], "x_axis": [ 0.107, 0.188, -0.976 ], "y_axis": [ 0.017, 0.981, 0.191 ], "z_axis": [ 0.994, -0.037, 0.102 ], "quaternion": [ 0.740, 0.077, 0.666, 0.058 ] } }, { "index": 286, "index_chain": 286, "chain_name": "a", "nt_resnum": 287, "nt_name": "G", "nt_code": "G", "nt_id": "///a/287", "linked_nts": [ "///a/286", "///a/288" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -157.321, "beta": 121.299, "gamma": 147.936, "delta": 84.552, "epsilon": -158.220, "zeta": -78.686, "epsilon_zeta": -79.534, "bb_type": "BI", "chi": -169.866, "glyco_bond": "anti", "C5prime_xyz": [ -1.110, 8.468, 1.080 ], "P_xyz": [ -0.534, 10.313, -0.656 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.601, "theta": -165.754, "eta_prime": -148.784, "theta_prime": -161.045, "eta_base": -82.446, "theta_base": -120.094, "v0": 5.452, "v1": -26.482, "v2": 36.330, "v3": -34.175, "v4": 18.135, "amplitude": 36.928, "phase_angle": 10.328, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 229.448, 187.865, 293.202 ], "x_axis": [ 0.329, 0.934, -0.142 ], "y_axis": [ -0.018, 0.157, 0.987 ], "z_axis": [ 0.944, -0.322, 0.068 ], "quaternion": [ 0.623, 0.525, 0.436, 0.382 ] } }, { "index": 287, "index_chain": 287, "chain_name": "a", "nt_resnum": 288, "nt_name": "U", "nt_code": "U", "nt_id": "///a/288", "linked_nts": [ "///a/287", "///a/289" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem", "alpha": -177.838, "beta": -146.899, "gamma": 144.732, "delta": 80.655, "epsilon": -121.364, "zeta": -71.980, "epsilon_zeta": -49.384, "bb_type": "--", "chi": -158.377, "glyco_bond": "anti", "C5prime_xyz": [ -1.417, 8.739, 0.429 ], "P_xyz": [ 0.683, 9.294, -1.012 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.055, "theta": -129.507, "eta_prime": -177.578, "theta_prime": -131.966, "eta_base": -124.353, "theta_base": -102.279, "v0": 0.739, "v1": -23.049, "v2": 35.391, "v3": -35.934, "v4": 22.189, "amplitude": 37.108, "phase_angle": 17.496, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.109, "frame": { "rmsd": 0.013, "origin": [ 232.200, 188.897, 291.956 ], "x_axis": [ 0.294, 0.819, 0.493 ], "y_axis": [ 0.135, -0.546, 0.827 ], "z_axis": [ 0.946, -0.177, -0.271 ], "quaternion": [ 0.345, 0.727, 0.328, 0.495 ] } }, { "index": 288, "index_chain": 288, "chain_name": "a", "nt_resnum": 289, "nt_name": "C", "nt_code": "C", "nt_id": "///a/289", "linked_nts": [ "///a/288", "///a/290" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -62.444, "beta": -179.805, "gamma": 41.708, "delta": 76.769, "epsilon": -164.112, "zeta": -87.734, "epsilon_zeta": -76.379, "bb_type": "BI", "chi": -156.360, "glyco_bond": "anti", "C5prime_xyz": [ -1.543, 8.822, 0.293 ], "P_xyz": [ 0.901, 9.584, 0.700 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.521, "theta": -142.585, "eta_prime": 173.200, "theta_prime": -143.762, "eta_base": -137.639, "theta_base": -109.266, "v0": 0.679, "v1": -25.079, "v2": 38.597, "v3": -39.242, "v4": 24.324, "amplitude": 40.505, "phase_angle": 17.655, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.493, "filter_rmsd": 0.069, "frame": { "rmsd": 0.017, "origin": [ 237.218, 190.812, 292.953 ], "x_axis": [ -0.290, 0.247, 0.925 ], "y_axis": [ -0.123, -0.968, 0.220 ], "z_axis": [ 0.949, -0.050, 0.311 ], "quaternion": [ 0.115, 0.585, 0.053, 0.801 ] } }, { "index": 289, "index_chain": 289, "chain_name": "a", "nt_resnum": 290, "nt_name": "U", "nt_code": "U", "nt_id": "///a/290", "linked_nts": [ "///a/289", "///a/291" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 168.579, "beta": -143.871, "gamma": 156.306, "delta": 83.304, "epsilon": -125.213, "zeta": -68.751, "epsilon_zeta": -56.462, "bb_type": "--", "chi": -165.395, "glyco_bond": "anti", "C5prime_xyz": [ -1.269, 8.563, 0.877 ], "P_xyz": [ 0.678, 9.305, -0.716 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.046, "theta": -131.331, "eta_prime": 179.609, "theta_prime": -134.545, "eta_base": -131.705, "theta_base": -96.526, "v0": 4.978, "v1": -26.278, "v2": 36.522, "v3": -34.578, "v4": 18.693, "amplitude": 37.216, "phase_angle": 11.082, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.178, "filter_rmsd": 0.105, "frame": { "rmsd": 0.018, "origin": [ 239.248, 192.023, 295.027 ], "x_axis": [ -0.350, -0.310, 0.884 ], "y_axis": [ 0.309, -0.929, -0.204 ], "z_axis": [ 0.885, 0.202, 0.421 ], "quaternion": [ -0.188, 0.538, -0.001, 0.822 ] } }, { "index": 290, "index_chain": 290, "chain_name": "a", "nt_resnum": 291, "nt_name": "G", "nt_code": "G", "nt_id": "///a/291", "linked_nts": [ "///a/290", "///a/292" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -66.383, "beta": 176.027, "gamma": 50.500, "delta": 79.861, "epsilon": -110.520, "zeta": -95.760, "epsilon_zeta": -14.760, "bb_type": "--", "chi": -156.316, "glyco_bond": "anti", "C5prime_xyz": [ -1.420, 8.727, 0.318 ], "P_xyz": [ 1.117, 9.276, 0.454 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.807, "theta": -111.478, "eta_prime": -175.913, "theta_prime": -150.577, "eta_base": -121.951, "theta_base": 158.082, "v0": 2.458, "v1": -25.690, "v2": 37.913, "v3": -37.528, "v4": 22.152, "amplitude": 39.273, "phase_angle": 15.122, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.687, "filter_rmsd": 0.024, "frame": { "rmsd": 0.024, "origin": [ 240.927, 191.395, 299.283 ], "x_axis": [ -0.289, -0.930, 0.229 ], "y_axis": [ 0.584, -0.361, -0.727 ], "z_axis": [ 0.758, -0.077, 0.648 ], "quaternion": [ -0.499, 0.325, -0.265, 0.758 ] } }, { "index": 291, "index_chain": 291, "chain_name": "a", "nt_resnum": 292, "nt_name": "A", "nt_code": "A", "nt_id": "///a/292", "linked_nts": [ "///a/291", "///a/293" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI", "alpha": 81.103, "beta": -166.053, "gamma": 115.418, "delta": 89.192, "epsilon": -144.467, "zeta": -47.651, "epsilon_zeta": -96.817, "bb_type": "BI", "chi": -171.656, "glyco_bond": "anti", "C5prime_xyz": [ -1.585, 8.583, 1.187 ], "P_xyz": [ 0.955, 9.149, 0.854 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 12.259, "theta": -114.864, "eta_prime": 39.091, "theta_prime": -119.473, "eta_base": 23.797, "theta_base": -67.417, "v0": -3.498, "v1": -15.715, "v2": 27.674, "v3": -30.474, "v4": 21.513, "amplitude": 30.542, "phase_angle": 25.030, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.016, "origin": [ 250.752, 198.700, 298.786 ], "x_axis": [ 0.164, 0.235, -0.958 ], "y_axis": [ -0.074, -0.965, -0.250 ], "z_axis": [ -0.984, 0.112, -0.141 ], "quaternion": [ -0.120, 0.753, 0.053, -0.644 ] } }, { "index": 292, "index_chain": 292, "chain_name": "a", "nt_resnum": 293, "nt_name": "G", "nt_code": "G", "nt_id": "///a/293", "linked_nts": [ "///a/292", "///a/294" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -99.101, "beta": 169.622, "gamma": 77.096, "delta": 83.299, "epsilon": -148.271, "zeta": -67.858, "epsilon_zeta": -80.413, "bb_type": "BI", "chi": -152.241, "glyco_bond": "anti", "C5prime_xyz": [ -1.437, 8.757, 0.054 ], "P_xyz": [ 1.030, 9.194, -0.675 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.706, "theta": -139.656, "eta_prime": -174.587, "theta_prime": -141.974, "eta_base": -96.333, "theta_base": -100.946, "v0": 0.914, "v1": -22.512, "v2": 34.253, "v3": -34.613, "v4": 21.340, "amplitude": 35.847, "phase_angle": 17.147, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.026, "filter_rmsd": 0.024, "frame": { "rmsd": 0.024, "origin": [ 247.804, 198.406, 294.771 ], "x_axis": [ -0.084, -0.706, -0.703 ], "y_axis": [ -0.325, -0.647, 0.689 ], "z_axis": [ -0.942, 0.287, -0.175 ], "quaternion": [ 0.153, 0.659, -0.391, -0.624 ] } }, { "index": 293, "index_chain": 293, "chain_name": "a", "nt_resnum": 294, "nt_name": "A", "nt_code": "A", "nt_id": "///a/294", "linked_nts": [ "///a/293", "///a/295" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -83.523, "beta": 168.738, "gamma": 69.499, "delta": 83.730, "epsilon": -149.167, "zeta": -63.790, "epsilon_zeta": -85.378, "bb_type": "BI", "chi": -153.907, "glyco_bond": "anti", "C5prime_xyz": [ -1.165, 8.616, 0.188 ], "P_xyz": [ 1.382, 8.784, -0.394 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.607, "theta": -96.006, "eta_prime": -178.715, "theta_prime": -100.003, "eta_base": -119.443, "theta_base": -68.005, "v0": 5.343, "v1": -26.768, "v2": 36.769, "v3": -34.605, "v4": 18.573, "amplitude": 37.401, "phase_angle": 10.546, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.456, "filter_rmsd": 0.042, "frame": { "rmsd": 0.020, "origin": [ 244.557, 197.529, 292.997 ], "x_axis": [ -0.143, -0.990, -0.007 ], "y_axis": [ -0.357, 0.045, 0.933 ], "z_axis": [ -0.923, 0.136, -0.359 ], "quaternion": [ -0.368, -0.541, 0.622, 0.430 ] } }, { "index": 294, "index_chain": 294, "chain_name": "a", "nt_resnum": 295, "nt_name": "G", "nt_code": "G", "nt_id": "///a/295", "linked_nts": [ "///a/294", "///a/296" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 144.502, "beta": -138.446, "gamma": -178.967, "delta": 81.988, "epsilon": -143.930, "zeta": -69.024, "epsilon_zeta": -74.906, "bb_type": "BI", "chi": -169.752, "glyco_bond": "anti", "C5prime_xyz": [ -1.274, 8.552, 1.064 ], "P_xyz": [ 0.079, 9.905, -0.727 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.703, "theta": -158.452, "eta_prime": -155.390, "theta_prime": -157.693, "eta_base": -88.216, "theta_base": -121.369, "v0": 5.384, "v1": -27.737, "v2": 38.280, "v3": -36.137, "v4": 19.444, "amplitude": 38.970, "phase_angle": 10.793, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.608, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 240.448, 192.506, 293.705 ], "x_axis": [ -0.487, -0.516, 0.704 ], "y_axis": [ -0.274, 0.856, 0.438 ], "z_axis": [ -0.829, 0.020, -0.559 ], "quaternion": [ -0.450, -0.232, 0.852, 0.134 ] } }, { "index": 295, "index_chain": 295, "chain_name": "a", "nt_resnum": 296, "nt_name": "G", "nt_code": "G", "nt_id": "///a/296", "linked_nts": [ "///a/295", "///a/297" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -69.490, "beta": 169.157, "gamma": 65.522, "delta": 81.349, "epsilon": -125.713, "zeta": -63.486, "epsilon_zeta": -62.227, "bb_type": "--", "chi": -169.328, "glyco_bond": "anti", "C5prime_xyz": [ -1.272, 8.622, 1.066 ], "P_xyz": [ 1.329, 8.922, 1.010 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.352, "theta": -130.371, "eta_prime": -169.007, "theta_prime": -138.301, "eta_base": -117.931, "theta_base": -122.214, "v0": 2.821, "v1": -25.473, "v2": 37.222, "v3": -36.480, "v4": 21.239, "amplitude": 38.431, "phase_angle": 14.405, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.733, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 236.578, 190.705, 292.823 ], "x_axis": [ -0.530, 0.199, 0.824 ], "y_axis": [ 0.128, 0.980, -0.154 ], "z_axis": [ -0.838, 0.024, -0.545 ], "quaternion": [ -0.476, 0.093, 0.874, -0.037 ] } }, { "index": 296, "index_chain": 296, "chain_name": "a", "nt_resnum": 297, "nt_name": "A", "nt_code": "A", "nt_id": "///a/297", "linked_nts": [ "///a/296", "///a/298" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -112.757, "beta": 126.550, "gamma": 120.787, "delta": 80.912, "epsilon": -116.819, "zeta": -72.361, "epsilon_zeta": -44.458, "bb_type": "--", "chi": -174.814, "glyco_bond": "anti", "C5prime_xyz": [ -1.157, 8.380, 1.371 ], "P_xyz": [ 0.246, 9.702, -0.374 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.561, "theta": -142.544, "eta_prime": 176.298, "theta_prime": -138.534, "eta_base": -147.726, "theta_base": -87.727, "v0": 6.066, "v1": -28.384, "v2": 38.783, "v3": -36.286, "v4": 19.063, "amplitude": 39.373, "phase_angle": 9.931, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.015, "origin": [ 233.800, 189.288, 292.433 ], "x_axis": [ -0.438, 0.571, 0.694 ], "y_axis": [ 0.106, 0.800, -0.591 ], "z_axis": [ -0.893, -0.186, -0.411 ], "quaternion": [ -0.488, 0.208, 0.814, -0.239 ] } }, { "index": 297, "index_chain": 297, "chain_name": "a", "nt_resnum": 298, "nt_name": "U", "nt_code": "U", "nt_id": "///a/298", "linked_nts": [ "///a/297", "///a/299" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end", "alpha": -68.615, "beta": 151.825, "gamma": 79.093, "delta": 82.694, "epsilon": -135.746, "zeta": -98.822, "epsilon_zeta": -36.923, "bb_type": "BI", "chi": -151.870, "glyco_bond": "anti", "C5prime_xyz": [ -1.607, 8.744, 0.016 ], "P_xyz": [ 0.708, 9.050, -1.176 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.563, "theta": -129.363, "eta_prime": -164.464, "theta_prime": -137.962, "eta_base": -94.185, "theta_base": -134.268, "v0": 0.809, "v1": -23.100, "v2": 35.296, "v3": -35.707, "v4": 22.064, "amplitude": 36.971, "phase_angle": 17.313, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.075, "filter_rmsd": 0.103, "frame": { "rmsd": 0.013, "origin": [ 230.212, 191.397, 293.728 ], "x_axis": [ -0.331, 0.943, -0.020 ], "y_axis": [ 0.041, -0.007, -0.999 ], "z_axis": [ -0.943, -0.332, -0.036 ], "quaternion": [ -0.396, 0.422, 0.583, -0.571 ] } }, { "index": 298, "index_chain": 298, "chain_name": "a", "nt_resnum": 299, "nt_name": "G", "nt_code": "G", "nt_id": "///a/299", "linked_nts": [ "///a/298", "///a/300" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,multiplet", "alpha": 86.370, "beta": -167.135, "gamma": -101.051, "delta": 156.334, "epsilon": -126.921, "zeta": 155.894, "epsilon_zeta": 77.185, "bb_type": "BII", "chi": -120.827, "glyco_bond": "anti", "C5prime_xyz": [ -0.829, 8.187, -0.874 ], "P_xyz": [ 0.752, 10.030, -1.783 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -161.353, "theta": 88.867, "eta_prime": -150.504, "theta_prime": 83.521, "eta_base": -140.611, "theta_base": 95.687, "v0": -6.581, "v1": 25.950, "v2": -34.320, "v3": 31.356, "v4": -15.885, "amplitude": 34.651, "phase_angle": 187.928, "puckering": "C3'-exo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 227.061, 191.433, 295.079 ], "x_axis": [ 0.262, 0.866, -0.427 ], "y_axis": [ -0.138, -0.404, -0.904 ], "z_axis": [ -0.955, 0.296, 0.014 ], "quaternion": [ -0.467, 0.643, 0.283, -0.538 ] } }, { "index": 299, "index_chain": 299, "chain_name": "a", "nt_resnum": 300, "nt_name": "A", "nt_code": "A", "nt_id": "///a/300", "linked_nts": [ "///a/299", "///a/301" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -54.017, "beta": -134.967, "gamma": -71.663, "delta": 83.017, "epsilon": -145.683, "zeta": -50.486, "epsilon_zeta": -95.197, "bb_type": "BI", "chi": -171.073, "glyco_bond": "anti", "C5prime_xyz": [ -1.147, 8.452, 1.162 ], "P_xyz": [ -1.129, 10.944, 1.947 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 142.662, "theta": -172.467, "eta_prime": 118.578, "theta_prime": -153.082, "eta_base": 122.552, "theta_base": -97.990, "v0": 6.287, "v1": -27.610, "v2": 37.152, "v3": -34.517, "v4": 17.862, "amplitude": 37.635, "phase_angle": 9.182, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23m", "cluster": "0k", "suiteness": 0.021, "filter_rmsd": 0.039, "frame": { "rmsd": 0.011, "origin": [ 230.189, 175.556, 292.104 ], "x_axis": [ 0.534, 0.547, 0.645 ], "y_axis": [ -0.451, 0.829, -0.330 ], "z_axis": [ -0.715, -0.114, 0.690 ], "quaternion": [ 0.874, -0.062, -0.389, 0.285 ] } }, { "index": 300, "index_chain": 300, "chain_name": "a", "nt_resnum": 301, "nt_name": "U", "nt_code": "U", "nt_id": "///a/301", "linked_nts": [ "///a/300", "///a/302" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -87.780, "beta": -165.625, "gamma": 63.422, "delta": 86.514, "epsilon": -140.932, "zeta": -46.684, "epsilon_zeta": -94.248, "bb_type": "BI", "chi": -159.693, "glyco_bond": "anti", "C5prime_xyz": [ -1.434, 8.715, 0.502 ], "P_xyz": [ 1.090, 9.107, 1.076 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.547, "theta": -107.246, "eta_prime": -167.615, "theta_prime": -105.272, "eta_base": -110.766, "theta_base": -67.955, "v0": -0.326, "v1": -20.169, "v2": 31.704, "v3": -32.738, "v4": 20.856, "amplitude": 33.547, "phase_angle": 19.081, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.365, "filter_rmsd": 0.106, "frame": { "rmsd": 0.010, "origin": [ 229.389, 177.262, 297.005 ], "x_axis": [ 0.121, 0.990, -0.073 ], "y_axis": [ -0.707, 0.034, -0.706 ], "z_axis": [ -0.697, 0.137, 0.704 ], "quaternion": [ 0.682, -0.309, -0.229, 0.622 ] } }, { "index": 301, "index_chain": 301, "chain_name": "a", "nt_resnum": 302, "nt_name": "C", "nt_code": "C", "nt_id": "///a/302", "linked_nts": [ "///a/301", "///a/303" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": -88.037, "beta": -163.152, "gamma": 53.693, "delta": 79.336, "epsilon": -136.977, "zeta": -71.594, "epsilon_zeta": -65.383, "bb_type": "BI", "chi": -154.000, "glyco_bond": "anti", "C5prime_xyz": [ -1.481, 8.835, 0.166 ], "P_xyz": [ 0.987, 9.465, 0.748 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.767, "theta": -138.501, "eta_prime": -176.267, "theta_prime": -134.732, "eta_base": -121.105, "theta_base": -102.821, "v0": -0.168, "v1": -23.280, "v2": 36.600, "v3": -37.686, "v4": 23.812, "amplitude": 38.667, "phase_angle": 18.818, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.329, "filter_rmsd": 0.067, "frame": { "rmsd": 0.015, "origin": [ 225.324, 182.552, 298.298 ], "x_axis": [ -0.156, 0.372, -0.915 ], "y_axis": [ -0.402, -0.870, -0.285 ], "z_axis": [ -0.902, 0.323, 0.285 ], "quaternion": [ 0.254, -0.598, 0.013, 0.760 ] } }, { "index": 302, "index_chain": 302, "chain_name": "a", "nt_resnum": 303, "nt_name": "A", "nt_code": "A", "nt_id": "///a/303", "linked_nts": [ "///a/302", "///a/304" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -73.141, "beta": 175.701, "gamma": 57.281, "delta": 77.332, "epsilon": -153.090, "zeta": -78.130, "epsilon_zeta": -74.960, "bb_type": "BI", "chi": -170.268, "glyco_bond": "anti", "C5prime_xyz": [ -1.569, 8.638, 1.075 ], "P_xyz": [ 0.917, 9.278, 1.458 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.318, "theta": -158.465, "eta_prime": 174.520, "theta_prime": -156.818, "eta_base": -139.458, "theta_base": -139.659, "v0": 0.011, "v1": -24.682, "v2": 38.570, "v3": -39.608, "v4": 24.907, "amplitude": 40.683, "phase_angle": 18.545, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.863, "filter_rmsd": 0.044, "frame": { "rmsd": 0.022, "origin": [ 221.185, 185.011, 297.346 ], "x_axis": [ 0.152, -0.365, -0.918 ], "y_axis": [ -0.118, -0.929, 0.350 ], "z_axis": [ -0.981, 0.055, -0.184 ], "quaternion": [ 0.098, 0.752, -0.161, -0.631 ] } }, { "index": 303, "index_chain": 303, "chain_name": "a", "nt_resnum": 304, "nt_name": "G", "nt_code": "G", "nt_id": "///a/304", "linked_nts": [ "///a/303", "///a/305" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -65.543, "beta": 178.241, "gamma": 52.871, "delta": 78.704, "epsilon": -143.886, "zeta": -72.374, "epsilon_zeta": -71.512, "bb_type": "BI", "chi": -167.624, "glyco_bond": "anti", "C5prime_xyz": [ -1.351, 8.625, 0.965 ], "P_xyz": [ 1.177, 9.073, 1.367 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.733, "theta": -143.934, "eta_prime": 176.783, "theta_prime": -140.396, "eta_base": -157.355, "theta_base": -112.237, "v0": 3.429, "v1": -26.918, "v2": 39.051, "v3": -37.969, "v4": 21.825, "amplitude": 40.206, "phase_angle": 13.767, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.914, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 218.260, 187.382, 296.140 ], "x_axis": [ 0.198, -0.748, -0.634 ], "y_axis": [ -0.189, -0.663, 0.724 ], "z_axis": [ -0.962, -0.023, -0.273 ], "quaternion": [ 0.256, 0.731, -0.321, -0.546 ] } }, { "index": 304, "index_chain": 304, "chain_name": "a", "nt_resnum": 305, "nt_name": "U", "nt_code": "U", "nt_id": "///a/305", "linked_nts": [ "///a/304", "///a/306" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -63.809, "beta": 171.682, "gamma": 58.800, "delta": 77.782, "epsilon": -146.977, "zeta": -71.234, "epsilon_zeta": -75.743, "bb_type": "BI", "chi": -163.087, "glyco_bond": "anti", "C5prime_xyz": [ -1.533, 8.738, 0.695 ], "P_xyz": [ 1.016, 9.305, 0.767 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.469, "theta": -144.934, "eta_prime": -175.894, "theta_prime": -143.384, "eta_base": -133.742, "theta_base": -119.405, "v0": 0.153, "v1": -24.739, "v2": 38.612, "v3": -39.431, "v4": 24.750, "amplitude": 40.668, "phase_angle": 18.295, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.918, "filter_rmsd": 0.107, "frame": { "rmsd": 0.017, "origin": [ 215.767, 187.172, 293.157 ], "x_axis": [ 0.157, -0.984, -0.086 ], "y_axis": [ -0.342, -0.136, 0.930 ], "z_axis": [ -0.927, -0.116, -0.358 ], "quaternion": [ 0.407, 0.642, -0.516, -0.394 ] } }, { "index": 305, "index_chain": 305, "chain_name": "a", "nt_resnum": 306, "nt_name": "C", "nt_code": "C", "nt_id": "///a/306", "linked_nts": [ "///a/305", "///a/307" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": -72.941, "beta": 166.006, "gamma": 77.564, "delta": 78.819, "epsilon": -144.975, "zeta": -65.070, "epsilon_zeta": -79.905, "bb_type": "BI", "chi": -155.944, "glyco_bond": "anti", "C5prime_xyz": [ -1.701, 8.888, 0.216 ], "P_xyz": [ 0.701, 9.601, -0.498 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.615, "theta": -137.251, "eta_prime": -169.008, "theta_prime": -138.562, "eta_base": -132.203, "theta_base": -99.237, "v0": -3.996, "v1": -19.971, "v2": 34.966, "v3": -38.205, "v4": 26.643, "amplitude": 38.403, "phase_angle": 24.425, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.216, "filter_rmsd": 0.063, "frame": { "rmsd": 0.015, "origin": [ 213.601, 185.694, 290.390 ], "x_axis": [ -0.089, -0.930, 0.355 ], "y_axis": [ -0.538, 0.345, 0.769 ], "z_axis": [ -0.838, -0.122, -0.531 ], "quaternion": [ -0.426, -0.524, 0.701, 0.231 ] } }, { "index": 306, "index_chain": 306, "chain_name": "a", "nt_resnum": 307, "nt_name": "A", "nt_code": "A", "nt_id": "///a/307", "linked_nts": [ "///a/306", "///a/308" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -76.635, "beta": 177.262, "gamma": 58.589, "delta": 80.154, "epsilon": -146.162, "zeta": -70.473, "epsilon_zeta": -75.689, "bb_type": "BI", "chi": -155.404, "glyco_bond": "anti", "C5prime_xyz": [ -1.513, 8.741, 0.197 ], "P_xyz": [ 1.035, 9.322, 0.166 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.817, "theta": -146.207, "eta_prime": 179.429, "theta_prime": -148.082, "eta_base": -124.811, "theta_base": -131.123, "v0": -0.615, "v1": -22.569, "v2": 35.923, "v3": -37.174, "v4": 23.874, "amplitude": 38.103, "phase_angle": 19.473, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.840, "filter_rmsd": 0.042, "frame": { "rmsd": 0.019, "origin": [ 210.577, 182.845, 289.786 ], "x_axis": [ -0.159, -0.352, 0.922 ], "y_axis": [ -0.438, 0.862, 0.254 ], "z_axis": [ -0.885, -0.364, -0.292 ], "quaternion": [ 0.594, 0.260, -0.760, 0.036 ] } }, { "index": 307, "index_chain": 307, "chain_name": "a", "nt_resnum": 308, "nt_name": "C", "nt_code": "C", "nt_id": "///a/308", "linked_nts": [ "///a/307", "///a/309" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -107.385, "beta": 153.748, "gamma": 107.535, "delta": 81.010, "epsilon": -137.596, "zeta": -72.678, "epsilon_zeta": -64.918, "bb_type": "BI", "chi": -158.125, "glyco_bond": "anti", "C5prime_xyz": [ -1.400, 8.791, 0.398 ], "P_xyz": [ 0.566, 9.515, -1.153 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.836, "theta": -146.783, "eta_prime": -177.883, "theta_prime": -143.200, "eta_base": -147.959, "theta_base": -136.265, "v0": 0.245, "v1": -23.404, "v2": 36.343, "v3": -37.162, "v4": 23.296, "amplitude": 38.260, "phase_angle": 18.216, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.070, "frame": { "rmsd": 0.018, "origin": [ 208.315, 180.289, 289.100 ], "x_axis": [ -0.303, 0.027, 0.953 ], "y_axis": [ -0.538, 0.820, -0.195 ], "z_axis": [ -0.786, -0.572, -0.234 ], "quaternion": [ 0.566, 0.167, -0.768, 0.250 ] } }, { "index": 308, "index_chain": 308, "chain_name": "a", "nt_resnum": 309, "nt_name": "A", "nt_code": "A", "nt_id": "///a/309", "linked_nts": [ "///a/308", "///a/310" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -68.214, "beta": -172.101, "gamma": 61.226, "delta": 142.530, "epsilon": -116.943, "zeta": 86.509, "epsilon_zeta": 156.548, "bb_type": "--", "chi": -117.475, "glyco_bond": "anti", "C5prime_xyz": [ -2.270, 8.432, -1.401 ], "P_xyz": [ 0.017, 9.603, -0.991 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -171.595, "theta": 112.868, "eta_prime": -147.803, "theta_prime": 85.400, "eta_base": -137.025, "theta_base": 142.675, "v0": -25.245, "v1": 36.980, "v2": -33.887, "v3": 20.286, "v4": 2.894, "amplitude": 36.885, "phase_angle": 156.739, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.870, "filter_rmsd": 0.039, "frame": { "rmsd": 0.022, "origin": [ 206.061, 177.414, 289.446 ], "x_axis": [ -0.001, 0.635, 0.772 ], "y_axis": [ -0.544, 0.648, -0.533 ], "z_axis": [ -0.839, -0.421, 0.345 ], "quaternion": [ 0.706, -0.040, -0.571, 0.418 ] } }, { "index": 309, "index_chain": 309, "chain_name": "a", "nt_resnum": 310, "nt_name": "C", "nt_code": "C", "nt_id": "///a/310", "linked_nts": [ "///a/309", "///a/311" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 50.268, "beta": 148.054, "gamma": 58.091, "delta": 82.421, "epsilon": -121.708, "zeta": -79.385, "epsilon_zeta": -42.323, "bb_type": "--", "chi": -158.145, "glyco_bond": "anti", "C5prime_xyz": [ -1.399, 8.783, 0.418 ], "P_xyz": [ 1.158, 8.915, -0.030 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -44.532, "theta": -125.115, "eta_prime": -45.483, "theta_prime": -125.846, "eta_base": -95.751, "theta_base": -97.137, "v0": 0.404, "v1": -22.559, "v2": 34.828, "v3": -35.529, "v4": 22.166, "amplitude": 36.610, "phase_angle": 17.954, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "6d", "suiteness": 0.827, "filter_rmsd": 0.065, "frame": { "rmsd": 0.013, "origin": [ 196.069, 178.357, 273.347 ], "x_axis": [ -0.795, 0.002, 0.607 ], "y_axis": [ 0.607, -0.013, 0.794 ], "z_axis": [ 0.009, 1.000, 0.009 ], "quaternion": [ -0.225, 0.229, 0.666, 0.674 ] } }, { "index": 310, "index_chain": 310, "chain_name": "a", "nt_resnum": 311, "nt_name": "U", "nt_code": "U", "nt_id": "///a/311", "linked_nts": [ "///a/310", "///a/312" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -63.591, "beta": -177.275, "gamma": 41.122, "delta": 79.639, "epsilon": -148.842, "zeta": -67.494, "epsilon_zeta": -81.348, "bb_type": "BI", "chi": -173.935, "glyco_bond": "anti", "C5prime_xyz": [ -1.296, 8.536, 1.357 ], "P_xyz": [ 1.087, 8.822, 2.413 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.106, "theta": -144.538, "eta_prime": 172.217, "theta_prime": -142.215, "eta_base": -142.087, "theta_base": -132.513, "v0": 3.157, "v1": -26.303, "v2": 38.222, "v3": -37.270, "v4": 21.492, "amplitude": 39.390, "phase_angle": 13.987, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.486, "filter_rmsd": 0.109, "frame": { "rmsd": 0.016, "origin": [ 194.112, 183.735, 276.298 ], "x_axis": [ -0.125, -0.757, 0.642 ], "y_axis": [ 0.972, -0.224, -0.076 ], "z_axis": [ 0.201, 0.614, 0.763 ], "quaternion": [ 0.595, -0.290, -0.185, -0.727 ] } }, { "index": 311, "index_chain": 311, "chain_name": "a", "nt_resnum": 312, "nt_name": "G", "nt_code": "G", "nt_id": "///a/312", "linked_nts": [ "///a/311", "///a/313" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -73.261, "beta": 178.777, "gamma": 55.017, "delta": 78.257, "epsilon": -161.192, "zeta": -82.295, "epsilon_zeta": -78.897, "bb_type": "BI", "chi": -149.876, "glyco_bond": "anti", "C5prime_xyz": [ -1.694, 8.892, -0.150 ], "P_xyz": [ 0.765, 9.759, -0.248 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.953, "theta": -133.636, "eta_prime": 175.339, "theta_prime": -143.464, "eta_base": -162.733, "theta_base": -124.326, "v0": -3.534, "v1": -20.494, "v2": 35.331, "v3": -38.329, "v4": 26.426, "amplitude": 38.593, "phase_angle": 23.728, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.917, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 192.163, 184.759, 277.539 ], "x_axis": [ 0.324, -0.791, 0.519 ], "y_axis": [ 0.932, 0.360, -0.033 ], "z_axis": [ -0.161, 0.495, 0.854 ], "quaternion": [ 0.797, -0.166, -0.213, -0.541 ] } }, { "index": 312, "index_chain": 312, "chain_name": "a", "nt_resnum": 313, "nt_name": "G", "nt_code": "G", "nt_id": "///a/313", "linked_nts": [ "///a/312", "///a/314" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 132.971, "beta": -153.526, "gamma": -161.877, "delta": 82.693, "epsilon": -126.622, "zeta": -76.112, "epsilon_zeta": -50.509, "bb_type": "--", "chi": 176.937, "glyco_bond": "anti", "C5prime_xyz": [ -1.347, 8.348, 1.851 ], "P_xyz": [ 0.094, 10.406, 1.154 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.286, "theta": -163.625, "eta_prime": -178.505, "theta_prime": -154.673, "eta_base": -142.297, "theta_base": -118.726, "v0": 1.300, "v1": -23.202, "v2": 35.035, "v3": -35.254, "v4": 21.437, "amplitude": 36.562, "phase_angle": 16.622, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.305, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 190.453, 184.657, 281.638 ], "x_axis": [ 0.713, -0.678, 0.178 ], "y_axis": [ 0.693, 0.645, -0.321 ], "z_axis": [ 0.102, 0.353, 0.930 ], "quaternion": [ 0.907, -0.186, -0.021, -0.378 ] } }, { "index": 313, "index_chain": 313, "chain_name": "a", "nt_resnum": 314, "nt_name": "A", "nt_code": "A", "nt_id": "///a/314", "linked_nts": [ "///a/313", "///a/315" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -55.795, "beta": 161.922, "gamma": 52.956, "delta": 80.955, "epsilon": -127.042, "zeta": -88.020, "epsilon_zeta": -39.022, "bb_type": "--", "chi": -167.951, "glyco_bond": "anti", "C5prime_xyz": [ -1.956, 8.729, 0.915 ], "P_xyz": [ 0.493, 9.475, 1.370 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.655, "theta": -154.697, "eta_prime": -172.796, "theta_prime": -157.237, "eta_base": -127.103, "theta_base": -148.241, "v0": -4.847, "v1": -18.488, "v2": 33.329, "v3": -37.060, "v4": 26.432, "amplitude": 37.056, "phase_angle": 25.919, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.681, "filter_rmsd": 0.041, "frame": { "rmsd": 0.014, "origin": [ 190.736, 183.838, 285.316 ], "x_axis": [ 0.975, -0.194, -0.109 ], "y_axis": [ 0.145, 0.925, -0.350 ], "z_axis": [ 0.169, 0.325, 0.930 ], "quaternion": [ 0.979, -0.173, 0.071, -0.087 ] } }, { "index": 314, "index_chain": 314, "chain_name": "a", "nt_resnum": 315, "nt_name": "A", "nt_code": "A", "nt_id": "///a/315", "linked_nts": [ "///a/314", "///a/316" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -90.349, "beta": 122.896, "gamma": 106.433, "delta": 83.279, "epsilon": -155.059, "zeta": -81.321, "epsilon_zeta": -73.737, "bb_type": "BI", "chi": -167.178, "glyco_bond": "anti", "C5prime_xyz": [ -1.511, 8.677, 0.914 ], "P_xyz": [ 0.222, 9.429, -0.900 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.853, "theta": -165.524, "eta_prime": -179.248, "theta_prime": -171.761, "eta_base": -157.294, "theta_base": -150.681, "v0": -1.237, "v1": -20.458, "v2": 33.024, "v3": -34.581, "v4": 22.689, "amplitude": 35.262, "phase_angle": 20.524, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.042, "frame": { "rmsd": 0.016, "origin": [ 190.076, 183.356, 288.440 ], "x_axis": [ 0.990, 0.138, -0.011 ], "y_axis": [ -0.138, 0.990, -0.035 ], "z_axis": [ 0.006, 0.036, 0.999 ], "quaternion": [ 0.997, -0.018, 0.004, 0.069 ] } }, { "index": 315, "index_chain": 315, "chain_name": "a", "nt_resnum": 316, "nt_name": "C", "nt_code": "C", "nt_id": "///a/316", "linked_nts": [ "///a/315", "///a/317" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -64.537, "beta": 161.688, "gamma": 67.036, "delta": 82.497, "epsilon": -130.782, "zeta": -76.660, "epsilon_zeta": -54.123, "bb_type": "BI", "chi": -151.081, "glyco_bond": "anti", "C5prime_xyz": [ -1.379, 8.777, -0.021 ], "P_xyz": [ 1.137, 8.980, -0.743 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.302, "theta": -131.756, "eta_prime": -169.806, "theta_prime": -131.843, "eta_base": -137.822, "theta_base": -100.087, "v0": 1.615, "v1": -23.278, "v2": 34.936, "v3": -34.894, "v4": 21.040, "amplitude": 36.363, "phase_angle": 16.103, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.633, "filter_rmsd": 0.072, "frame": { "rmsd": 0.015, "origin": [ 190.155, 181.979, 291.646 ], "x_axis": [ 0.770, 0.551, 0.322 ], "y_axis": [ -0.617, 0.773, 0.151 ], "z_axis": [ -0.166, -0.315, 0.935 ], "quaternion": [ 0.932, 0.125, -0.131, 0.313 ] } }, { "index": 316, "index_chain": 316, "chain_name": "a", "nt_resnum": 317, "nt_name": "U", "nt_code": "U", "nt_id": "///a/317", "linked_nts": [ "///a/316", "///a/318" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -60.631, "beta": 164.680, "gamma": 55.290, "delta": 79.753, "epsilon": -116.472, "zeta": -71.648, "epsilon_zeta": -44.824, "bb_type": "--", "chi": -153.704, "glyco_bond": "anti", "C5prime_xyz": [ -1.593, 8.755, 0.133 ], "P_xyz": [ 0.944, 9.264, -0.168 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.558, "theta": -121.338, "eta_prime": -174.535, "theta_prime": -117.280, "eta_base": -128.964, "theta_base": -70.331, "v0": 1.601, "v1": -24.926, "v2": 37.466, "v3": -37.525, "v4": 22.654, "amplitude": 39.029, "phase_angle": 16.269, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.794, "filter_rmsd": 0.106, "frame": { "rmsd": 0.016, "origin": [ 191.502, 182.731, 295.825 ], "x_axis": [ 0.233, 0.972, -0.019 ], "y_axis": [ -0.972, 0.233, 0.027 ], "z_axis": [ 0.031, 0.013, 0.999 ], "quaternion": [ 0.785, 0.005, 0.016, 0.619 ] } }, { "index": 317, "index_chain": 317, "chain_name": "a", "nt_resnum": 318, "nt_name": "G", "nt_code": "G", "nt_id": "///a/318", "linked_nts": [ "///a/317", "///a/319" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -71.272, "beta": 147.874, "gamma": 80.211, "delta": 80.279, "epsilon": -138.252, "zeta": -75.250, "epsilon_zeta": -63.002, "bb_type": "BI", "chi": -151.136, "glyco_bond": "anti", "C5prime_xyz": [ -1.704, 8.749, -0.034 ], "P_xyz": [ 0.439, 9.168, -1.453 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.475, "theta": -127.772, "eta_prime": -170.009, "theta_prime": -170.920, "eta_base": -104.361, "theta_base": 109.390, "v0": 1.521, "v1": -24.516, "v2": 36.858, "v3": -36.931, "v4": 22.406, "amplitude": 38.413, "phase_angle": 16.359, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.047, "filter_rmsd": 0.025, "frame": { "rmsd": 0.025, "origin": [ 190.924, 187.118, 297.953 ], "x_axis": [ -0.578, 0.798, -0.170 ], "y_axis": [ -0.786, -0.487, 0.382 ], "z_axis": [ 0.222, 0.354, 0.909 ], "quaternion": [ 0.459, 0.015, 0.213, 0.862 ] } }, { "index": 318, "index_chain": 318, "chain_name": "a", "nt_resnum": 319, "nt_name": "A", "nt_code": "A", "nt_id": "///a/319", "linked_nts": [ "///a/318", "///a/320" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,BI", "alpha": -172.422, "beta": 161.580, "gamma": 48.419, "delta": 79.752, "epsilon": -148.420, "zeta": -60.666, "epsilon_zeta": -87.754, "bb_type": "BI", "chi": 104.622, "glyco_bond": "--", "C5prime_xyz": [ -3.524, 5.934, 3.397 ], "P_xyz": [ -2.390, 4.427, 5.200 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 41.255, "theta": -133.219, "eta_prime": 59.689, "theta_prime": -138.670, "eta_base": 36.418, "theta_base": 101.567, "v0": 2.265, "v1": -25.551, "v2": 37.802, "v3": -37.366, "v4": 22.132, "amplitude": 39.178, "phase_angle": 15.233, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.623, "filter_rmsd": 0.064, "frame": { "rmsd": 0.036, "origin": [ 192.762, 180.246, 301.492 ], "x_axis": [ 0.134, -0.964, 0.229 ], "y_axis": [ -0.066, 0.222, 0.973 ], "z_axis": [ -0.989, -0.145, -0.034 ], "quaternion": [ 0.575, 0.486, -0.530, -0.391 ] } }, { "index": 319, "index_chain": 319, "chain_name": "a", "nt_resnum": 320, "nt_name": "G", "nt_code": "G", "nt_id": "///a/320", "linked_nts": [ "///a/319", "///a/321" ], "nt_type": "RNA", "dbn": ".", "summary": "", "alpha": -81.251, "beta": -174.634, "gamma": 29.514, "delta": 142.438, "epsilon": -102.987, "zeta": -132.314, "epsilon_zeta": 29.328, "bb_type": "--", "chi": 171.846, "glyco_bond": "--", "C5prime_xyz": [ -2.179, 8.207, 2.182 ], "P_xyz": [ -1.824, 7.857, 4.764 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.483, "theta": -106.288, "eta_prime": 173.851, "theta_prime": -113.361, "eta_base": 79.831, "theta_base": -105.034, "v0": -22.193, "v1": 35.317, "v2": -34.323, "v3": 22.243, "v4": -0.323, "amplitude": 36.152, "phase_angle": 161.695, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.043, "filter_rmsd": 0.026, "frame": { "rmsd": 0.026, "origin": [ 195.783, 179.461, 304.489 ], "x_axis": [ -0.024, -0.122, 0.992 ], "y_axis": [ -0.071, 0.990, 0.120 ], "z_axis": [ -0.997, -0.067, -0.033 ], "quaternion": [ 0.695, 0.067, -0.715, -0.018 ] } }, { "index": 320, "index_chain": 320, "chain_name": "a", "nt_resnum": 321, "nt_name": "A", "nt_code": "A", "nt_id": "///a/321", "linked_nts": [ "///a/320", "///a/322" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": 43.834, "beta": 179.481, "gamma": -53.225, "delta": 156.846, "epsilon": -110.545, "zeta": -63.895, "epsilon_zeta": -46.650, "bb_type": "--", "chi": -78.272, "glyco_bond": "anti", "C5prime_xyz": [ -2.274, 7.104, -2.819 ], "P_xyz": [ -1.380, 9.093, -4.246 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -154.983, "theta": -102.038, "eta_prime": -131.897, "theta_prime": -104.552, "eta_base": -129.831, "theta_base": -70.623, "v0": -14.777, "v1": 33.374, "v2": -38.305, "v3": 30.633, "v4": -10.209, "amplitude": 38.379, "phase_angle": 176.452, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.021, "origin": [ 192.734, 178.714, 295.845 ], "x_axis": [ -0.968, -0.008, 0.252 ], "y_axis": [ -0.021, 0.999, -0.049 ], "z_axis": [ -0.252, -0.052, -0.966 ], "quaternion": [ -0.127, -0.007, 0.992, -0.025 ] } }, { "index": 321, "index_chain": 321, "chain_name": "a", "nt_resnum": 322, "nt_name": "C", "nt_code": "C", "nt_id": "///a/322", "linked_nts": [ "///a/321", "///a/323" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": -112.343, "beta": 100.295, "gamma": 167.875, "delta": 131.080, "epsilon": 26.736, "zeta": -76.213, "epsilon_zeta": -257.050, "bb_type": "--", "chi": -108.843, "glyco_bond": "anti", "C5prime_xyz": [ -2.123, 8.301, -1.881 ], "P_xyz": [ -2.596, 8.425, -4.449 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -78.692, "theta": 3.196, "eta_prime": -82.071, "theta_prime": 57.849, "eta_base": -80.224, "theta_base": 94.172, "v0": -22.459, "v1": 30.388, "v2": -26.512, "v3": 14.291, "v4": 4.947, "amplitude": 30.045, "phase_angle": 151.935, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.061, "frame": { "rmsd": 0.009, "origin": [ 188.260, 189.589, 292.755 ], "x_axis": [ -0.095, 0.921, 0.379 ], "y_axis": [ 0.953, 0.194, -0.233 ], "z_axis": [ -0.288, 0.339, -0.896 ], "quaternion": [ -0.226, 0.634, 0.739, 0.036 ] } }, { "index": 322, "index_chain": 322, "chain_name": "a", "nt_resnum": 323, "nt_name": "A", "nt_code": "A", "nt_id": "///a/323", "linked_nts": [ "///a/322", "///a/324" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -143.487, "beta": -140.082, "gamma": 173.193, "delta": 148.938, "epsilon": -97.999, "zeta": -60.058, "epsilon_zeta": -37.941, "bb_type": "--", "chi": 178.040, "glyco_bond": "anti", "C5prime_xyz": [ -2.420, 8.200, 1.957 ], "P_xyz": [ -0.058, 8.918, 2.729 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -109.595, "theta": -80.708, "eta_prime": -135.898, "theta_prime": -117.469, "eta_base": -149.206, "theta_base": -154.265, "v0": -24.944, "v1": 40.052, "v2": -39.097, "v3": 25.634, "v4": -0.708, "amplitude": 41.065, "phase_angle": 162.191, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.046, "frame": { "rmsd": 0.017, "origin": [ 190.641, 178.925, 292.936 ], "x_axis": [ -0.761, 0.629, 0.157 ], "y_axis": [ 0.605, 0.776, -0.180 ], "z_axis": [ -0.235, -0.042, -0.971 ], "quaternion": [ -0.105, 0.329, 0.936, -0.059 ] } }, { "index": 323, "index_chain": 323, "chain_name": "a", "nt_resnum": 324, "nt_name": "C", "nt_code": "C", "nt_id": "///a/324", "linked_nts": [ "///a/323", "///a/325" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical", "alpha": -66.784, "beta": -159.702, "gamma": -167.052, "delta": 79.617, "epsilon": -133.184, "zeta": -61.210, "epsilon_zeta": -71.974, "bb_type": "BI", "chi": -163.682, "glyco_bond": "anti", "C5prime_xyz": [ -1.409, 8.759, 0.729 ], "P_xyz": [ -0.452, 10.644, -0.780 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -49.018, "theta": -162.418, "eta_prime": 0.161, "theta_prime": -152.686, "eta_base": 34.893, "theta_base": -108.420, "v0": 0.786, "v1": -25.099, "v2": 38.574, "v3": -39.064, "v4": 24.132, "amplitude": 40.435, "phase_angle": 17.447, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "2h", "suiteness": 0.402, "filter_rmsd": 0.064, "frame": { "rmsd": 0.013, "origin": [ 204.896, 171.236, 289.837 ], "x_axis": [ 0.106, -0.075, 0.991 ], "y_axis": [ -0.515, 0.849, 0.120 ], "z_axis": [ -0.850, -0.524, 0.052 ], "quaternion": [ 0.708, 0.227, -0.650, 0.155 ] } }, { "index": 324, "index_chain": 324, "chain_name": "a", "nt_resnum": 325, "nt_name": "G", "nt_code": "G", "nt_id": "///a/325", "linked_nts": [ "///a/324", "///a/326" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-canonical,helix-end", "alpha": -64.499, "beta": -133.983, "gamma": 23.857, "delta": 133.478, "epsilon": -152.669, "zeta": 37.255, "epsilon_zeta": 170.076, "bb_type": "--", "chi": 74.857, "glyco_bond": "syn", "C5prime_xyz": [ -5.353, 5.190, 1.772 ], "P_xyz": [ -7.455, 3.802, 1.034 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.183, "theta": 20.737, "eta_prime": -171.607, "theta_prime": -24.322, "eta_base": -128.989, "theta_base": -32.291, "v0": -29.304, "v1": 36.292, "v2": -28.875, "v3": 12.853, "v4": 10.153, "amplitude": 35.375, "phase_angle": 144.711, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1[", "suiteness": 0.028, "filter_rmsd": 0.029, "frame": { "rmsd": 0.029, "origin": [ 201.714, 169.953, 292.781 ], "x_axis": [ 0.453, -0.883, 0.126 ], "y_axis": [ -0.536, -0.382, -0.752 ], "z_axis": [ 0.712, 0.273, -0.647 ], "quaternion": [ -0.325, 0.788, -0.450, 0.266 ] } }, { "index": 325, "index_chain": 325, "chain_name": "a", "nt_resnum": 326, "nt_name": "G", "nt_code": "G", "nt_id": "///a/326", "linked_nts": [ "///a/325", "///a/327" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": 109.392, "beta": 105.311, "gamma": -168.972, "delta": 82.244, "epsilon": -141.147, "zeta": -72.619, "epsilon_zeta": -68.529, "bb_type": "BI", "chi": -173.231, "glyco_bond": "anti", "C5prime_xyz": [ -1.202, 8.545, 1.305 ], "P_xyz": [ -1.717, 11.041, 0.751 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 104.500, "theta": 156.971, "eta_prime": 139.318, "theta_prime": 178.741, "eta_base": 168.502, "theta_base": -144.940, "v0": 2.343, "v1": -24.092, "v2": 35.473, "v3": -35.093, "v4": 20.706, "amplitude": 36.734, "phase_angle": 15.054, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "6j", "suiteness": 0.010, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 190.851, 182.020, 289.460 ], "x_axis": [ 0.867, 0.407, -0.288 ], "y_axis": [ 0.390, -0.913, -0.116 ], "z_axis": [ -0.310, -0.011, -0.951 ], "quaternion": [ -0.027, 0.966, 0.206, -0.155 ] } }, { "index": 326, "index_chain": 326, "chain_name": "a", "nt_resnum": 327, "nt_name": "U", "nt_code": "U", "nt_id": "///a/327", "linked_nts": [ "///a/326", "///a/328" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -63.746, "beta": -177.630, "gamma": 48.012, "delta": 83.028, "epsilon": -146.363, "zeta": -76.910, "epsilon_zeta": -69.452, "bb_type": "BI", "chi": -161.618, "glyco_bond": "anti", "C5prime_xyz": [ -1.457, 8.723, 0.633 ], "P_xyz": [ 0.984, 9.238, 1.415 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.285, "theta": -146.680, "eta_prime": -176.816, "theta_prime": -144.636, "eta_base": -141.358, "theta_base": -127.147, "v0": -0.191, "v1": -21.645, "v2": 34.002, "v3": -35.013, "v4": 22.228, "amplitude": 35.935, "phase_angle": 18.880, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.909, "filter_rmsd": 0.105, "frame": { "rmsd": 0.012, "origin": [ 189.938, 183.914, 285.829 ], "x_axis": [ 0.984, -0.171, -0.049 ], "y_axis": [ -0.166, -0.982, 0.089 ], "z_axis": [ -0.063, -0.079, -0.995 ], "quaternion": [ 0.042, 0.995, -0.085, -0.028 ] } }, { "index": 327, "index_chain": 327, "chain_name": "a", "nt_resnum": 328, "nt_name": "C", "nt_code": "C", "nt_id": "///a/328", "linked_nts": [ "///a/327", "///a/329" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -61.118, "beta": 174.562, "gamma": 45.646, "delta": 78.990, "epsilon": -145.652, "zeta": -77.968, "epsilon_zeta": -67.684, "bb_type": "BI", "chi": -155.766, "glyco_bond": "anti", "C5prime_xyz": [ -1.620, 8.888, 0.251 ], "P_xyz": [ 0.844, 9.648, 0.598 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.589, "theta": -150.104, "eta_prime": 175.478, "theta_prime": -146.989, "eta_base": -157.050, "theta_base": -123.553, "v0": -2.591, "v1": -21.247, "v2": 35.596, "v3": -38.031, "v4": 25.594, "amplitude": 38.478, "phase_angle": 22.317, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.865, "filter_rmsd": 0.065, "frame": { "rmsd": 0.010, "origin": [ 190.212, 185.319, 282.329 ], "x_axis": [ 0.796, -0.572, 0.199 ], "y_axis": [ -0.590, -0.806, 0.042 ], "z_axis": [ 0.136, -0.151, -0.979 ], "quaternion": [ 0.051, 0.946, -0.307, 0.089 ] } }, { "index": 328, "index_chain": 328, "chain_name": "a", "nt_resnum": 329, "nt_name": "C", "nt_code": "C", "nt_id": "///a/329", "linked_nts": [ "///a/328", "///a/330" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -58.648, "beta": 163.729, "gamma": 58.329, "delta": 76.246, "epsilon": -135.101, "zeta": -89.228, "epsilon_zeta": -45.873, "bb_type": "BI", "chi": -150.737, "glyco_bond": "anti", "C5prime_xyz": [ -1.789, 8.913, -0.071 ], "P_xyz": [ 0.663, 9.667, -0.507 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.628, "theta": -153.140, "eta_prime": -175.673, "theta_prime": -150.837, "eta_base": -143.678, "theta_base": -120.309, "v0": -3.234, "v1": -21.367, "v2": 36.581, "v3": -39.473, "v4": 26.964, "amplitude": 39.806, "phase_angle": 23.222, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.855, "filter_rmsd": 0.063, "frame": { "rmsd": 0.014, "origin": [ 192.168, 185.263, 279.188 ], "x_axis": [ 0.432, -0.861, 0.268 ], "y_axis": [ -0.851, -0.487, -0.195 ], "z_axis": [ 0.299, -0.143, -0.943 ], "quaternion": [ -0.015, 0.846, -0.506, 0.167 ] } }, { "index": 329, "index_chain": 329, "chain_name": "a", "nt_resnum": 330, "nt_name": "A", "nt_code": "A", "nt_id": "///a/330", "linked_nts": [ "///a/329", "///a/331" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -54.960, "beta": 159.587, "gamma": 50.316, "delta": 78.742, "epsilon": -140.728, "zeta": -75.271, "epsilon_zeta": -65.457, "bb_type": "BI", "chi": -174.396, "glyco_bond": "anti", "C5prime_xyz": [ -1.515, 8.524, 1.355 ], "P_xyz": [ 1.042, 8.872, 1.700 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.402, "theta": -141.335, "eta_prime": 175.689, "theta_prime": -139.265, "eta_base": -142.604, "theta_base": -108.362, "v0": 2.284, "v1": -25.821, "v2": 38.271, "v3": -37.988, "v4": 22.515, "amplitude": 39.693, "phase_angle": 15.379, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.638, "filter_rmsd": 0.043, "frame": { "rmsd": 0.017, "origin": [ 194.210, 183.011, 275.204 ], "x_axis": [ -0.234, -0.768, 0.596 ], "y_axis": [ -0.972, 0.184, -0.144 ], "z_axis": [ 0.001, -0.613, -0.790 ], "quaternion": [ -0.200, -0.586, 0.743, -0.255 ] } }, { "index": 330, "index_chain": 330, "chain_name": "a", "nt_resnum": 331, "nt_name": "G", "nt_code": "G", "nt_id": "///a/331", "linked_nts": [ "///a/330", "///a/332" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -59.839, "beta": 167.064, "gamma": 60.894, "delta": 79.244, "epsilon": -146.613, "zeta": -75.707, "epsilon_zeta": -70.906, "bb_type": "BI", "chi": -155.714, "glyco_bond": "anti", "C5prime_xyz": [ -1.343, 8.833, 0.242 ], "P_xyz": [ 1.209, 9.289, -0.090 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.913, "theta": -148.087, "eta_prime": -171.313, "theta_prime": -149.315, "eta_base": -125.162, "theta_base": -130.040, "v0": 0.771, "v1": -23.878, "v2": 36.688, "v3": -37.206, "v4": 22.959, "amplitude": 38.460, "phase_angle": 17.461, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.860, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 195.374, 179.764, 274.033 ], "x_axis": [ -0.756, -0.596, 0.271 ], "y_axis": [ -0.613, 0.498, -0.614 ], "z_axis": [ 0.231, -0.630, -0.742 ], "quaternion": [ -0.012, -0.349, 0.865, -0.359 ] } }, { "index": 331, "index_chain": 331, "chain_name": "a", "nt_resnum": 332, "nt_name": "A", "nt_code": "A", "nt_id": "///a/332", "linked_nts": [ "///a/331", "///a/333" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -69.174, "beta": 165.711, "gamma": 60.568, "delta": 80.324, "epsilon": -145.336, "zeta": -69.674, "epsilon_zeta": -75.661, "bb_type": "BI", "chi": -166.725, "glyco_bond": "anti", "C5prime_xyz": [ -1.694, 8.705, 0.875 ], "P_xyz": [ 0.840, 9.321, 0.985 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.118, "theta": -139.030, "eta_prime": 177.921, "theta_prime": -138.497, "eta_base": -148.302, "theta_base": -98.010, "v0": -1.951, "v1": -20.979, "v2": 34.573, "v3": -36.619, "v4": 24.363, "amplitude": 37.164, "phase_angle": 21.519, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.880, "filter_rmsd": 0.040, "frame": { "rmsd": 0.014, "origin": [ 196.293, 176.712, 272.543 ], "x_axis": [ -0.977, -0.079, 0.198 ], "y_axis": [ -0.197, 0.687, -0.699 ], "z_axis": [ -0.081, -0.722, -0.687 ], "quaternion": [ -0.076, -0.075, 0.915, -0.388 ] } }, { "index": 332, "index_chain": 332, "chain_name": "a", "nt_resnum": 333, "nt_name": "C", "nt_code": "C", "nt_id": "///a/333", "linked_nts": [ "///a/332", "///a/334" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -66.790, "beta": 169.546, "gamma": 56.604, "delta": 80.134, "epsilon": -167.471, "zeta": -93.025, "epsilon_zeta": -74.446, "bb_type": "BI", "chi": -158.265, "glyco_bond": "anti", "C5prime_xyz": [ -1.484, 8.845, 0.417 ], "P_xyz": [ 1.081, 9.331, 0.516 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.701, "theta": -143.645, "eta_prime": -177.089, "theta_prime": -150.604, "eta_base": -117.646, "theta_base": -142.298, "v0": -1.566, "v1": -21.437, "v2": 35.062, "v3": -36.888, "v4": 24.247, "amplitude": 37.538, "phase_angle": 20.926, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.973, "filter_rmsd": 0.062, "frame": { "rmsd": 0.009, "origin": [ 194.151, 173.980, 271.373 ], "x_axis": [ -0.836, 0.477, -0.270 ], "y_axis": [ 0.502, 0.467, -0.728 ], "z_axis": [ -0.221, -0.744, -0.630 ], "quaternion": [ 0.014, 0.286, 0.856, -0.430 ] } }, { "index": 333, "index_chain": 333, "chain_name": "a", "nt_resnum": 334, "nt_name": "U", "nt_code": "U", "nt_id": "///a/334", "linked_nts": [ "///a/333", "///a/335" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 172.977, "beta": -146.025, "gamma": 150.757, "delta": 81.285, "epsilon": -125.310, "zeta": -83.021, "epsilon_zeta": -42.290, "bb_type": "--", "chi": -162.412, "glyco_bond": "anti", "C5prime_xyz": [ -1.431, 8.710, 0.668 ], "P_xyz": [ 0.645, 9.407, -0.733 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.072, "theta": -144.868, "eta_prime": 172.052, "theta_prime": -146.645, "eta_base": -166.182, "theta_base": -117.594, "v0": 0.691, "v1": -22.767, "v2": 34.959, "v3": -35.573, "v4": 21.989, "amplitude": 36.673, "phase_angle": 17.587, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.030, "filter_rmsd": 0.103, "frame": { "rmsd": 0.009, "origin": [ 192.997, 171.297, 271.054 ], "x_axis": [ -0.543, 0.681, -0.491 ], "y_axis": [ 0.693, 0.035, -0.720 ], "z_axis": [ -0.473, -0.731, -0.491 ], "quaternion": [ 0.006, 0.478, 0.719, -0.504 ] } }, { "index": 334, "index_chain": 334, "chain_name": "a", "nt_resnum": 335, "nt_name": "C", "nt_code": "C", "nt_id": "///a/335", "linked_nts": [ "///a/334", "///a/336" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -59.260, "beta": 155.397, "gamma": 60.382, "delta": 77.555, "epsilon": -150.545, "zeta": -80.702, "epsilon_zeta": -69.844, "bb_type": "BI", "chi": -154.846, "glyco_bond": "anti", "C5prime_xyz": [ -1.655, 8.901, 0.168 ], "P_xyz": [ 0.836, 9.465, -0.365 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.159, "theta": -154.764, "eta_prime": -178.886, "theta_prime": -156.276, "eta_base": -132.980, "theta_base": -139.897, "v0": -2.357, "v1": -21.765, "v2": 36.291, "v3": -38.640, "v4": 25.842, "amplitude": 39.134, "phase_angle": 21.977, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.576, "filter_rmsd": 0.062, "frame": { "rmsd": 0.006, "origin": [ 189.993, 169.992, 268.908 ], "x_axis": [ 0.033, 0.681, -0.731 ], "y_axis": [ 0.802, -0.455, -0.387 ], "z_axis": [ -0.597, -0.574, -0.561 ], "quaternion": [ 0.065, 0.716, 0.518, -0.464 ] } }, { "index": 335, "index_chain": 335, "chain_name": "a", "nt_resnum": 336, "nt_name": "C", "nt_code": "C", "nt_id": "///a/336", "linked_nts": [ "///a/335", "///a/337" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -60.836, "beta": 165.803, "gamma": 61.951, "delta": 77.520, "epsilon": -135.584, "zeta": -69.837, "epsilon_zeta": -65.747, "bb_type": "BI", "chi": -156.293, "glyco_bond": "anti", "C5prime_xyz": [ -1.601, 8.866, 0.261 ], "P_xyz": [ 0.904, 9.507, -0.096 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.231, "theta": -135.411, "eta_prime": -175.123, "theta_prime": -134.901, "eta_base": -149.044, "theta_base": -105.249, "v0": -0.639, "v1": -23.381, "v2": 37.174, "v3": -38.572, "v4": 24.728, "amplitude": 39.441, "phase_angle": 19.519, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.798, "filter_rmsd": 0.062, "frame": { "rmsd": 0.007, "origin": [ 186.435, 168.535, 266.956 ], "x_axis": [ 0.393, 0.470, -0.790 ], "y_axis": [ 0.697, -0.713, -0.077 ], "z_axis": [ -0.599, -0.521, -0.608 ], "quaternion": [ 0.135, 0.824, 0.354, -0.422 ] } }, { "index": 336, "index_chain": 336, "chain_name": "a", "nt_resnum": 337, "nt_name": "U", "nt_code": "U", "nt_id": "///a/337", "linked_nts": [ "///a/336", "///a/338" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -69.505, "beta": 170.811, "gamma": 58.599, "delta": 77.532, "epsilon": -158.352, "zeta": -83.500, "epsilon_zeta": -74.852, "bb_type": "BI", "chi": -143.086, "glyco_bond": "anti", "C5prime_xyz": [ -2.032, 8.814, -0.524 ], "P_xyz": [ 0.329, 9.704, -1.160 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.977, "theta": -174.516, "eta_prime": 178.550, "theta_prime": 145.836, "eta_base": -136.549, "theta_base": 102.897, "v0": -4.305, "v1": -20.028, "v2": 35.297, "v3": -38.737, "v4": 27.161, "amplitude": 38.880, "phase_angle": 24.791, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.846, "filter_rmsd": 0.102, "frame": { "rmsd": 0.007, "origin": [ 185.244, 168.651, 263.695 ], "x_axis": [ 0.842, 0.133, -0.523 ], "y_axis": [ 0.233, -0.964, 0.130 ], "z_axis": [ -0.487, -0.231, -0.842 ], "quaternion": [ 0.095, 0.955, 0.096, -0.264 ] } }, { "index": 337, "index_chain": 337, "chain_name": "a", "nt_resnum": 338, "nt_name": "A", "nt_code": "A", "nt_id": "///a/338", "linked_nts": [ "///a/337", "///a/339" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -154.027, "beta": 128.825, "gamma": 47.041, "delta": 146.743, "epsilon": -88.718, "zeta": -56.381, "epsilon_zeta": -32.337, "bb_type": "--", "chi": -104.209, "glyco_bond": "anti", "C5prime_xyz": [ -2.212, 8.079, -2.008 ], "P_xyz": [ 0.420, 8.167, -1.926 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 61.765, "theta": -15.578, "eta_prime": 84.843, "theta_prime": -44.642, "eta_base": 64.560, "theta_base": -13.912, "v0": -20.407, "v1": 34.481, "v2": -34.583, "v3": 23.828, "v4": -2.387, "amplitude": 35.816, "phase_angle": 164.923, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1z", "suiteness": 0.506, "filter_rmsd": 0.036, "frame": { "rmsd": 0.011, "origin": [ 177.439, 155.448, 267.350 ], "x_axis": [ 0.761, -0.304, 0.574 ], "y_axis": [ 0.592, 0.687, -0.422 ], "z_axis": [ -0.266, 0.660, 0.702 ], "quaternion": [ 0.887, -0.305, -0.236, -0.253 ] } }, { "index": 338, "index_chain": 338, "chain_name": "a", "nt_resnum": 339, "nt_name": "C", "nt_code": "C", "nt_id": "///a/339", "linked_nts": [ "///a/338", "///a/340" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -96.293, "beta": -170.359, "gamma": 78.277, "delta": 147.635, "epsilon": -119.648, "zeta": 107.361, "epsilon_zeta": 132.990, "bb_type": "--", "chi": -134.863, "glyco_bond": "anti", "C5prime_xyz": [ -1.694, 8.748, -0.440 ], "P_xyz": [ 0.740, 9.220, 0.384 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.681, "theta": 129.117, "eta_prime": -146.409, "theta_prime": 73.188, "eta_base": -143.915, "theta_base": 61.276, "v0": -21.855, "v1": 36.295, "v2": -36.011, "v3": 24.320, "v4": -1.738, "amplitude": 37.491, "phase_angle": 163.851, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "2[", "suiteness": 0.082, "filter_rmsd": 0.062, "frame": { "rmsd": 0.008, "origin": [ 186.598, 165.172, 260.352 ], "x_axis": [ 0.148, -0.988, -0.047 ], "y_axis": [ -0.985, -0.151, 0.084 ], "z_axis": [ -0.090, 0.034, -0.995 ], "quaternion": [ 0.017, 0.757, -0.651, -0.045 ] } }, { "index": 339, "index_chain": 339, "chain_name": "a", "nt_resnum": 340, "nt_name": "G", "nt_code": "G", "nt_id": "///a/340", "linked_nts": [ "///a/339", "///a/341" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-canonical,helix-end", "alpha": 48.883, "beta": -147.683, "gamma": 172.564, "delta": 81.477, "epsilon": -114.677, "zeta": -79.842, "epsilon_zeta": -34.835, "bb_type": "--", "chi": 68.750, "glyco_bond": "syn", "C5prime_xyz": [ -5.096, 4.720, 2.196 ], "P_xyz": [ -4.620, 4.446, 4.748 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 114.819, "theta": -143.066, "eta_prime": 102.717, "theta_prime": -130.473, "eta_base": 119.667, "theta_base": -131.288, "v0": -5.450, "v1": -17.238, "v2": 31.939, "v3": -36.080, "v4": 26.160, "amplitude": 35.900, "phase_angle": 27.170, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "6n", "suiteness": 0.329, "filter_rmsd": 0.022, "frame": { "rmsd": 0.022, "origin": [ 181.847, 165.341, 265.158 ], "x_axis": [ -0.145, -0.980, 0.140 ], "y_axis": [ -0.988, 0.152, 0.041 ], "z_axis": [ -0.061, -0.132, -0.989 ], "quaternion": [ -0.067, -0.651, 0.756, -0.030 ] } }, { "index": 340, "index_chain": 340, "chain_name": "a", "nt_resnum": 341, "nt_name": "G", "nt_code": "G", "nt_id": "///a/341", "linked_nts": [ "///a/340", "///a/342" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end", "alpha": -47.981, "beta": 133.458, "gamma": 97.767, "delta": 82.915, "epsilon": -155.395, "zeta": -78.902, "epsilon_zeta": -76.494, "bb_type": "BI", "chi": -156.002, "glyco_bond": "anti", "C5prime_xyz": [ -1.117, 8.717, 0.312 ], "P_xyz": [ 0.710, 8.944, -1.553 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -170.462, "theta": -123.857, "eta_prime": -131.345, "theta_prime": -144.209, "eta_base": -111.691, "theta_base": -135.307, "v0": 3.823, "v1": -25.301, "v2": 36.076, "v3": -34.788, "v4": 19.596, "amplitude": 36.997, "phase_angle": 12.817, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 186.420, 167.625, 266.962 ], "x_axis": [ 0.487, 0.664, -0.568 ], "y_axis": [ -0.795, 0.606, 0.027 ], "z_axis": [ 0.362, 0.438, 0.823 ], "quaternion": [ 0.854, -0.120, 0.272, 0.427 ] } }, { "index": 341, "index_chain": 341, "chain_name": "a", "nt_resnum": 342, "nt_name": "G", "nt_code": "G", "nt_id": "///a/342", "linked_nts": [ "///a/341", "///a/343" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 128.916, "beta": -149.759, "gamma": -157.620, "delta": 79.715, "epsilon": -127.509, "zeta": -84.673, "epsilon_zeta": -42.837, "bb_type": "--", "chi": -178.145, "glyco_bond": "anti", "C5prime_xyz": [ -1.173, 8.385, 1.575 ], "P_xyz": [ -0.008, 10.498, 0.584 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.591, "theta": -171.319, "eta_prime": -173.990, "theta_prime": -161.485, "eta_base": -137.940, "theta_base": -129.567, "v0": 5.494, "v1": -28.189, "v2": 39.141, "v3": -36.955, "v4": 19.844, "amplitude": 39.855, "phase_angle": 10.862, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.140, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 190.235, 169.001, 269.053 ], "x_axis": [ 0.132, 0.861, -0.491 ], "y_axis": [ -0.923, 0.287, 0.256 ], "z_axis": [ 0.362, 0.420, 0.832 ], "quaternion": [ 0.750, -0.055, 0.284, 0.594 ] } }, { "index": 342, "index_chain": 342, "chain_name": "a", "nt_resnum": 343, "nt_name": "A", "nt_code": "A", "nt_id": "///a/343", "linked_nts": [ "///a/342", "///a/344" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -41.792, "beta": 156.848, "gamma": 50.079, "delta": 76.736, "epsilon": -136.393, "zeta": -83.521, "epsilon_zeta": -52.871, "bb_type": "BI", "chi": -166.236, "glyco_bond": "anti", "C5prime_xyz": [ -1.765, 8.707, 0.857 ], "P_xyz": [ 0.772, 9.321, 0.960 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.981, "theta": -145.245, "eta_prime": -170.777, "theta_prime": -142.200, "eta_base": -130.212, "theta_base": -108.671, "v0": -0.807, "v1": -23.563, "v2": 37.718, "v3": -39.140, "v4": 25.185, "amplitude": 40.064, "phase_angle": 19.702, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.410, "filter_rmsd": 0.039, "frame": { "rmsd": 0.013, "origin": [ 193.246, 171.180, 270.535 ], "x_axis": [ -0.392, 0.875, -0.284 ], "y_axis": [ -0.824, -0.197, 0.532 ], "z_axis": [ 0.410, 0.442, 0.798 ], "quaternion": [ 0.550, 0.041, 0.315, 0.772 ] } }, { "index": 343, "index_chain": 343, "chain_name": "a", "nt_resnum": 344, "nt_name": "G", "nt_code": "G", "nt_id": "///a/344", "linked_nts": [ "///a/343", "///a/345" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -50.414, "beta": 161.822, "gamma": 54.544, "delta": 80.096, "epsilon": -141.327, "zeta": -97.968, "epsilon_zeta": -43.359, "bb_type": "BI", "chi": -147.048, "glyco_bond": "anti", "C5prime_xyz": [ -1.485, 8.852, -0.269 ], "P_xyz": [ 1.039, 9.314, -0.727 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.907, "theta": -162.705, "eta_prime": -171.816, "theta_prime": -153.535, "eta_base": -127.702, "theta_base": -152.735, "v0": -1.758, "v1": -21.172, "v2": 34.763, "v3": -36.771, "v4": 24.315, "amplitude": 37.307, "phase_angle": 21.280, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.689, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 194.609, 174.253, 271.883 ], "x_axis": [ -0.799, 0.594, 0.098 ], "y_axis": [ -0.318, -0.554, 0.769 ], "z_axis": [ 0.511, 0.583, 0.631 ], "quaternion": [ 0.264, 0.176, 0.391, 0.864 ] } }, { "index": 344, "index_chain": 344, "chain_name": "a", "nt_resnum": 345, "nt_name": "G", "nt_code": "G", "nt_id": "///a/345", "linked_nts": [ "///a/344", "///a/346" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -54.178, "beta": 160.468, "gamma": 69.187, "delta": 141.404, "epsilon": -90.243, "zeta": -148.614, "epsilon_zeta": 58.370, "bb_type": "--", "chi": -103.286, "glyco_bond": "anti", "C5prime_xyz": [ -2.115, 8.188, -2.060 ], "P_xyz": [ 0.382, 8.331, -2.796 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -150.321, "theta": 144.983, "eta_prime": -135.332, "theta_prime": 113.828, "eta_base": -142.001, "theta_base": 98.642, "v0": -22.518, "v1": 33.983, "v2": -31.845, "v3": 19.698, "v4": 1.575, "amplitude": 34.199, "phase_angle": 158.616, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.425, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 196.590, 175.769, 273.462 ], "x_axis": [ -0.924, 0.329, 0.194 ], "y_axis": [ 0.073, -0.346, 0.935 ], "z_axis": [ 0.374, 0.879, 0.296 ], "quaternion": [ 0.080, 0.177, 0.566, 0.801 ] } }, { "index": 345, "index_chain": 345, "chain_name": "a", "nt_resnum": 346, "nt_name": "C", "nt_code": "C", "nt_id": "///a/346", "linked_nts": [ "///a/345", "///a/347" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BII,non-canonical,multiplet", "alpha": -106.317, "beta": -93.639, "gamma": -166.730, "delta": 83.430, "epsilon": -122.710, "zeta": 168.475, "epsilon_zeta": 68.815, "bb_type": "BII", "chi": -158.258, "glyco_bond": "anti", "C5prime_xyz": [ -1.294, 8.757, 0.445 ], "P_xyz": [ -0.768, 9.366, -2.044 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 76.459, "theta": 106.417, "eta_prime": 81.700, "theta_prime": 75.707, "eta_base": 100.941, "theta_base": -30.961, "v0": 2.511, "v1": -24.199, "v2": 35.477, "v3": -34.889, "v4": 20.417, "amplitude": 36.674, "phase_angle": 14.676, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.069, "frame": { "rmsd": 0.014, "origin": [ 207.500, 163.536, 279.157 ], "x_axis": [ -0.408, -0.149, -0.901 ], "y_axis": [ -0.389, 0.921, 0.024 ], "z_axis": [ 0.826, 0.360, -0.434 ], "quaternion": [ 0.520, -0.162, 0.831, 0.115 ] } }, { "index": 346, "index_chain": 346, "chain_name": "a", "nt_resnum": 347, "nt_name": "A", "nt_code": "A", "nt_id": "///a/347", "linked_nts": [ "///a/346", "///a/348" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-canonical,multiplet", "alpha": 66.229, "beta": -140.055, "gamma": 61.537, "delta": 75.039, "epsilon": -156.322, "zeta": -144.285, "epsilon_zeta": -12.036, "bb_type": "--", "chi": 9.894, "glyco_bond": "syn", "C5prime_xyz": [ -5.821, 4.606, -0.900 ], "P_xyz": [ -6.466, 2.619, -2.449 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 10.326, "theta": 119.928, "eta_prime": 6.977, "theta_prime": 139.268, "eta_base": 96.571, "theta_base": -58.275, "v0": -11.737, "v1": -13.962, "v2": 32.592, "v3": -40.292, "v4": 32.846, "amplitude": 39.914, "phase_angle": 35.258, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "3d", "suiteness": 0.099, "filter_rmsd": 0.045, "frame": { "rmsd": 0.024, "origin": [ 206.359, 179.631, 278.966 ], "x_axis": [ -0.532, 0.779, 0.331 ], "y_axis": [ 0.376, -0.134, 0.917 ], "z_axis": [ 0.759, 0.612, -0.222 ], "quaternion": [ 0.168, 0.454, 0.636, 0.601 ] } }, { "index": 347, "index_chain": 347, "chain_name": "a", "nt_resnum": 348, "nt_name": "G", "nt_code": "G", "nt_id": "///a/348", "linked_nts": [ "///a/347", "///a/349" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end,stem-end", "alpha": -65.692, "beta": -155.648, "gamma": 161.596, "delta": 85.587, "epsilon": -113.944, "zeta": -87.054, "epsilon_zeta": -26.890, "bb_type": "--", "chi": 166.549, "glyco_bond": "anti", "C5prime_xyz": [ -1.084, 7.797, 2.421 ], "P_xyz": [ 1.257, 8.864, 2.030 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -32.955, "theta": -144.747, "eta_prime": -58.216, "theta_prime": -141.655, "eta_base": 145.720, "theta_base": -118.279, "v0": 9.958, "v1": -29.688, "v2": 37.039, "v3": -32.319, "v4": 14.154, "amplitude": 37.105, "phase_angle": 3.427, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.025, "frame": { "rmsd": 0.025, "origin": [ 205.224, 164.227, 285.989 ], "x_axis": [ -0.472, 0.166, -0.866 ], "y_axis": [ 0.147, 0.983, 0.108 ], "z_axis": [ 0.869, -0.076, -0.488 ], "quaternion": [ 0.506, 0.091, 0.858, 0.009 ] } }, { "index": 348, "index_chain": 348, "chain_name": "a", "nt_resnum": 349, "nt_name": "C", "nt_code": "C", "nt_id": "///a/349", "linked_nts": [ "///a/348", "///a/350" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -48.522, "beta": 171.663, "gamma": 37.081, "delta": 81.118, "epsilon": -152.083, "zeta": -81.339, "epsilon_zeta": -70.744, "bb_type": "BI", "chi": -164.439, "glyco_bond": "anti", "C5prime_xyz": [ -1.194, 8.713, 0.842 ], "P_xyz": [ 1.263, 8.989, 1.668 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.747, "theta": -123.474, "eta_prime": 178.763, "theta_prime": -132.848, "eta_base": -143.350, "theta_base": -106.057, "v0": 2.022, "v1": -24.031, "v2": 35.855, "v3": -35.603, "v4": 21.185, "amplitude": 37.220, "phase_angle": 15.563, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.203, "filter_rmsd": 0.072, "frame": { "rmsd": 0.018, "origin": [ 207.573, 162.079, 283.591 ], "x_axis": [ -0.404, 0.734, -0.545 ], "y_axis": [ 0.392, 0.678, 0.622 ], "z_axis": [ 0.826, 0.037, -0.562 ], "quaternion": [ 0.422, 0.346, 0.813, 0.203 ] } }, { "index": 349, "index_chain": 349, "chain_name": "a", "nt_resnum": 350, "nt_name": "A", "nt_code": "A", "nt_id": "///a/350", "linked_nts": [ "///a/349", "///a/351" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end,multiplet", "alpha": 135.569, "beta": -154.771, "gamma": -174.454, "delta": 80.738, "epsilon": -120.035, "zeta": -66.966, "epsilon_zeta": -53.069, "bb_type": "--", "chi": -170.851, "glyco_bond": "anti", "C5prime_xyz": [ -0.941, 8.407, 1.183 ], "P_xyz": [ 0.511, 10.069, -0.189 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.266, "theta": -144.831, "eta_prime": 171.583, "theta_prime": -137.851, "eta_base": -140.276, "theta_base": -94.135, "v0": 7.569, "v1": -29.536, "v2": 39.346, "v3": -35.948, "v4": 17.887, "amplitude": 39.720, "phase_angle": 7.866, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.628, "filter_rmsd": 0.045, "frame": { "rmsd": 0.018, "origin": [ 207.981, 161.981, 280.737 ], "x_axis": [ -0.140, 0.972, -0.189 ], "y_axis": [ 0.742, 0.230, 0.630 ], "z_axis": [ 0.656, -0.052, -0.753 ], "quaternion": [ 0.290, 0.588, 0.728, 0.198 ] } }, { "index": 350, "index_chain": 350, "chain_name": "a", "nt_resnum": 351, "nt_name": "G", "nt_code": "G", "nt_id": "///a/351", "linked_nts": [ "///a/350", "///a/352" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix-end,stem-end,multiplet", "alpha": -59.633, "beta": 168.013, "gamma": 57.006, "delta": 80.400, "epsilon": -150.671, "zeta": -83.582, "epsilon_zeta": -67.089, "bb_type": "BI", "chi": -174.991, "glyco_bond": "anti", "C5prime_xyz": [ -1.526, 8.592, 1.376 ], "P_xyz": [ 1.014, 9.000, 1.838 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.953, "theta": -156.637, "eta_prime": -170.554, "theta_prime": -156.292, "eta_base": -106.484, "theta_base": -152.022, "v0": 0.155, "v1": -23.140, "v2": 36.063, "v3": -36.946, "v4": 23.197, "amplitude": 37.999, "phase_angle": 18.366, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.552, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 210.001, 166.005, 277.671 ], "x_axis": [ 0.270, 0.726, 0.633 ], "y_axis": [ 0.529, -0.661, 0.532 ], "z_axis": [ 0.805, 0.191, -0.562 ], "quaternion": [ 0.108, 0.789, 0.397, 0.455 ] } }, { "index": 351, "index_chain": 351, "chain_name": "a", "nt_resnum": 352, "nt_name": "U", "nt_code": "U", "nt_id": "///a/352", "linked_nts": [ "///a/351", "///a/353" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -57.826, "beta": 172.159, "gamma": 52.174, "delta": 77.555, "epsilon": -144.698, "zeta": -73.931, "epsilon_zeta": -70.767, "bb_type": "BI", "chi": -159.172, "glyco_bond": "anti", "C5prime_xyz": [ -1.618, 8.781, 0.451 ], "P_xyz": [ 0.892, 9.483, 0.539 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.756, "theta": -146.995, "eta_prime": -179.838, "theta_prime": -145.578, "eta_base": -166.925, "theta_base": -116.458, "v0": 0.733, "v1": -24.799, "v2": 38.175, "v3": -38.705, "v4": 23.938, "amplitude": 40.034, "phase_angle": 17.529, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.847, "filter_rmsd": 0.106, "frame": { "rmsd": 0.010, "origin": [ 210.381, 167.394, 273.844 ], "x_axis": [ 0.497, 0.505, 0.705 ], "y_axis": [ 0.518, -0.825, 0.226 ], "z_axis": [ 0.696, 0.253, -0.672 ], "quaternion": [ -0.008, 0.865, 0.296, 0.405 ] } }, { "index": 352, "index_chain": 352, "chain_name": "a", "nt_resnum": 353, "nt_name": "G", "nt_code": "G", "nt_id": "///a/353", "linked_nts": [ "///a/352", "///a/354" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -65.799, "beta": 168.998, "gamma": 58.302, "delta": 78.421, "epsilon": -146.016, "zeta": -65.047, "epsilon_zeta": -80.969, "bb_type": "BI", "chi": -173.342, "glyco_bond": "anti", "C5prime_xyz": [ -1.669, 8.702, 1.242 ], "P_xyz": [ 0.825, 9.301, 1.692 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.481, "theta": -137.292, "eta_prime": 179.487, "theta_prime": -134.415, "eta_base": -137.192, "theta_base": -85.794, "v0": -1.944, "v1": -22.158, "v2": 36.420, "v3": -38.520, "v4": 25.503, "amplitude": 39.102, "phase_angle": 21.347, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.915, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 213.103, 170.090, 272.356 ], "x_axis": [ 0.396, -0.136, 0.908 ], "y_axis": [ 0.101, -0.976, -0.191 ], "z_axis": [ 0.913, 0.167, -0.373 ], "quaternion": [ -0.108, 0.829, -0.011, 0.549 ] } }, { "index": 353, "index_chain": 353, "chain_name": "a", "nt_resnum": 354, "nt_name": "G", "nt_code": "G", "nt_id": "///a/354", "linked_nts": [ "///a/353", "///a/355" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -73.011, "beta": 173.439, "gamma": 61.346, "delta": 83.584, "epsilon": -138.793, "zeta": -78.552, "epsilon_zeta": -60.241, "bb_type": "BI", "chi": -172.487, "glyco_bond": "anti", "C5prime_xyz": [ -1.159, 8.500, 1.286 ], "P_xyz": [ 1.447, 8.587, 1.607 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.877, "theta": -140.516, "eta_prime": -172.788, "theta_prime": -139.435, "eta_base": -105.465, "theta_base": -117.867, "v0": 4.708, "v1": -25.705, "v2": 35.816, "v3": -34.069, "v4": 18.531, "amplitude": 36.534, "phase_angle": 11.380, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.837, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 217.658, 170.218, 273.312 ], "x_axis": [ 0.255, -0.875, 0.412 ], "y_axis": [ -0.337, -0.480, -0.810 ], "z_axis": [ 0.906, 0.067, -0.417 ], "quaternion": [ -0.299, 0.733, -0.413, 0.449 ] } }, { "index": 354, "index_chain": 354, "chain_name": "a", "nt_resnum": 355, "nt_name": "G", "nt_code": "G", "nt_id": "///a/355", "linked_nts": [ "///a/354", "///a/356" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix", "alpha": -61.165, "beta": 161.448, "gamma": 60.986, "delta": 76.337, "epsilon": -117.544, "zeta": -74.110, "epsilon_zeta": -43.434, "bb_type": "--", "chi": -153.105, "glyco_bond": "anti", "C5prime_xyz": [ -1.461, 8.769, 0.063 ], "P_xyz": [ 1.002, 9.210, -0.644 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.522, "theta": -126.734, "eta_prime": -173.343, "theta_prime": -123.406, "eta_base": -138.128, "theta_base": -80.178, "v0": 2.722, "v1": -26.530, "v2": 39.072, "v3": -38.515, "v4": 22.568, "amplitude": 40.418, "phase_angle": 14.827, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.795, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 220.889, 170.597, 273.701 ], "x_axis": [ 0.281, -0.953, -0.115 ], "y_axis": [ -0.191, 0.062, -0.980 ], "z_axis": [ 0.940, 0.297, -0.165 ], "quaternion": [ 0.543, -0.588, 0.486, -0.351 ] } }, { "index": 355, "index_chain": 355, "chain_name": "a", "nt_resnum": 356, "nt_name": "G", "nt_code": "G", "nt_id": "///a/356", "linked_nts": [ "///a/355", "///a/357" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end,multiplet", "alpha": -65.313, "beta": 154.293, "gamma": 70.296, "delta": 77.975, "epsilon": -141.071, "zeta": -69.645, "epsilon_zeta": -71.426, "bb_type": "BI", "chi": -152.475, "glyco_bond": "anti", "C5prime_xyz": [ -1.637, 8.814, 0.061 ], "P_xyz": [ 0.709, 9.313, -0.925 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.302, "theta": -130.297, "eta_prime": -174.216, "theta_prime": -175.605, "eta_base": -112.781, "theta_base": 129.242, "v0": 1.138, "v1": -25.273, "v2": 38.566, "v3": -38.845, "v4": 23.789, "amplitude": 40.322, "phase_angle": 16.971, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.281, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 223.720, 167.540, 272.013 ], "x_axis": [ -0.266, -0.670, -0.693 ], "y_axis": [ -0.013, 0.721, -0.692 ], "z_axis": [ 0.964, -0.175, -0.201 ], "quaternion": [ 0.560, -0.231, 0.740, -0.293 ] } }, { "index": 356, "index_chain": 356, "chain_name": "a", "nt_resnum": 357, "nt_name": "A", "nt_code": "A", "nt_id": "///a/357", "linked_nts": [ "///a/356", "///a/358" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -178.394, "beta": 142.167, "gamma": 52.481, "delta": 80.971, "epsilon": -113.756, "zeta": -86.180, "epsilon_zeta": -27.576, "bb_type": "--", "chi": -167.823, "glyco_bond": "anti", "C5prime_xyz": [ -1.469, 8.608, 0.965 ], "P_xyz": [ 1.127, 8.743, 0.750 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 36.867, "theta": -128.177, "eta_prime": 54.582, "theta_prime": -126.270, "eta_base": 33.613, "theta_base": -84.904, "v0": 0.260, "v1": -23.122, "v2": 35.911, "v3": -36.748, "v4": 23.010, "amplitude": 37.806, "phase_angle": 18.218, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.728, "filter_rmsd": 0.041, "frame": { "rmsd": 0.018, "origin": [ 230.359, 176.566, 275.634 ], "x_axis": [ -0.717, 0.678, -0.162 ], "y_axis": [ -0.091, -0.322, -0.942 ], "z_axis": [ -0.691, -0.661, 0.293 ], "quaternion": [ 0.252, -0.279, -0.525, 0.764 ] } }, { "index": 357, "index_chain": 357, "chain_name": "a", "nt_resnum": 358, "nt_name": "A", "nt_code": "A", "nt_id": "///a/358", "linked_nts": [ "///a/357", "///a/359" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -69.220, "beta": 148.845, "gamma": 77.412, "delta": 82.011, "epsilon": -123.590, "zeta": -103.540, "epsilon_zeta": -20.049, "bb_type": "--", "chi": -138.938, "glyco_bond": "anti", "C5prime_xyz": [ -1.494, 8.691, -0.713 ], "P_xyz": [ 0.675, 8.707, -2.138 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.825, "theta": -164.728, "eta_prime": -170.226, "theta_prime": -171.983, "eta_base": -115.003, "theta_base": -142.754, "v0": -1.469, "v1": -20.987, "v2": 34.117, "v3": -35.914, "v4": 23.688, "amplitude": 36.519, "phase_angle": 20.894, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.072, "filter_rmsd": 0.042, "frame": { "rmsd": 0.013, "origin": [ 226.688, 176.325, 275.713 ], "x_axis": [ -0.633, 0.283, -0.720 ], "y_axis": [ 0.080, -0.902, -0.425 ], "z_axis": [ -0.770, -0.327, 0.548 ], "quaternion": [ 0.058, -0.424, -0.214, 0.878 ] } }, { "index": 358, "index_chain": 358, "chain_name": "a", "nt_resnum": 359, "nt_name": "U", "nt_code": "U", "nt_id": "///a/359", "linked_nts": [ "///a/358", "///a/360" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BII,non-stack,non-canonical,multiplet", "alpha": -88.882, "beta": 143.828, "gamma": 79.019, "delta": 81.103, "epsilon": -111.116, "zeta": 164.537, "epsilon_zeta": 84.347, "bb_type": "BII", "chi": 58.389, "glyco_bond": "syn", "C5prime_xyz": [ -5.615, 4.961, 1.541 ], "P_xyz": [ -5.572, 3.215, 3.458 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.833, "theta": 117.078, "eta_prime": 165.170, "theta_prime": 132.709, "eta_base": -160.890, "theta_base": 138.311, "v0": -15.929, "v1": -7.489, "v2": 26.315, "v3": -36.395, "v4": 33.005, "amplitude": 36.499, "phase_angle": 43.864, "puckering": "C4'-exo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.152, "filter_rmsd": 0.108, "frame": { "rmsd": 0.015, "origin": [ 223.599, 173.105, 277.100 ], "x_axis": [ 0.324, 0.870, 0.372 ], "y_axis": [ 0.519, -0.492, 0.699 ], "z_axis": [ 0.791, -0.033, -0.611 ], "quaternion": [ 0.235, 0.779, 0.446, 0.373 ] } }, { "index": 359, "index_chain": 359, "chain_name": "a", "nt_resnum": 360, "nt_name": "A", "nt_code": "A", "nt_id": "///a/360", "linked_nts": [ "///a/359", "///a/361" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -56.184, "beta": 147.204, "gamma": 54.581, "delta": 140.453, "epsilon": -130.108, "zeta": -87.618, "epsilon_zeta": -42.491, "bb_type": "--", "chi": -149.571, "glyco_bond": "anti", "C5prime_xyz": [ -1.909, 8.713, 0.252 ], "P_xyz": [ 0.535, 8.964, 1.157 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -153.632, "theta": -58.521, "eta_prime": -144.801, "theta_prime": -122.735, "eta_base": -170.839, "theta_base": -148.949, "v0": -23.099, "v1": 34.370, "v2": -31.826, "v3": 19.347, "v4": 2.181, "amplitude": 34.415, "phase_angle": 157.635, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "3b", "suiteness": 0.412, "filter_rmsd": 0.038, "frame": { "rmsd": 0.019, "origin": [ 221.565, 164.938, 288.360 ], "x_axis": [ -0.138, 0.986, -0.095 ], "y_axis": [ 0.212, -0.065, -0.975 ], "z_axis": [ -0.968, -0.154, -0.200 ], "quaternion": [ -0.387, 0.531, 0.564, -0.501 ] } }, { "index": 360, "index_chain": 360, "chain_name": "a", "nt_resnum": 361, "nt_name": "U", "nt_code": "U", "nt_id": "///a/361", "linked_nts": [ "///a/360", "///a/362" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix", "alpha": 136.590, "beta": 135.055, "gamma": 155.955, "delta": 147.149, "epsilon": -123.701, "zeta": -60.368, "epsilon_zeta": -63.333, "bb_type": "--", "chi": -132.687, "glyco_bond": "anti", "C5prime_xyz": [ -1.665, 8.642, -0.560 ], "P_xyz": [ -0.294, 9.700, -2.548 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 117.436, "theta": -128.408, "eta_prime": 149.662, "theta_prime": -128.048, "eta_base": 147.668, "theta_base": -112.892, "v0": -20.388, "v1": 34.832, "v2": -35.159, "v3": 24.220, "v4": -2.659, "amplitude": 36.345, "phase_angle": 165.324, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.104, "frame": { "rmsd": 0.013, "origin": [ 217.671, 158.085, 290.431 ], "x_axis": [ 0.316, 0.928, 0.198 ], "y_axis": [ 0.242, 0.123, -0.962 ], "z_axis": [ -0.917, 0.352, -0.186 ], "quaternion": [ 0.559, -0.587, -0.498, 0.306 ] } }, { "index": 361, "index_chain": 361, "chain_name": "a", "nt_resnum": 362, "nt_name": "U", "nt_code": "U", "nt_id": "///a/362", "linked_nts": [ "///a/361", "///a/363" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack,non-canonical,helix-end,multiplet", "alpha": -88.205, "beta": 150.121, "gamma": -166.900, "delta": 142.742, "epsilon": -149.270, "zeta": 39.644, "epsilon_zeta": 171.086, "bb_type": "--", "chi": -91.119, "glyco_bond": "anti", "C5prime_xyz": [ -2.698, 7.689, -2.493 ], "P_xyz": [ -3.031, 8.248, -5.040 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -63.885, "theta": -26.510, "eta_prime": -35.051, "theta_prime": -16.724, "eta_base": -25.544, "theta_base": 55.867, "v0": -23.666, "v1": 35.434, "v2": -33.070, "v3": 20.257, "v4": 1.918, "amplitude": 35.623, "phase_angle": 158.175, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "2u", "suiteness": 0.386, "filter_rmsd": 0.103, "frame": { "rmsd": 0.009, "origin": [ 208.186, 157.805, 276.825 ], "x_axis": [ -0.432, -0.751, -0.499 ], "y_axis": [ 0.324, -0.645, 0.692 ], "z_axis": [ -0.842, 0.137, 0.522 ], "quaternion": [ -0.334, -0.416, 0.257, 0.806 ] } }, { "index": 362, "index_chain": 362, "chain_name": "a", "nt_resnum": 363, "nt_name": "G", "nt_code": "G", "nt_id": "///a/363", "linked_nts": [ "///a/362", "///a/364" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -171.609, "beta": -162.931, "gamma": 172.636, "delta": 82.588, "epsilon": -124.632, "zeta": -71.912, "epsilon_zeta": -52.720, "bb_type": "--", "chi": 169.542, "glyco_bond": "anti", "C5prime_xyz": [ -1.242, 8.023, 2.265 ], "P_xyz": [ 0.781, 9.624, 1.923 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -141.854, "theta": -147.629, "eta_prime": -115.897, "theta_prime": -142.871, "eta_base": -156.032, "theta_base": -110.198, "v0": 6.556, "v1": -27.345, "v2": 36.768, "v3": -33.914, "v4": 17.251, "amplitude": 37.194, "phase_angle": 8.674, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.025, "frame": { "rmsd": 0.025, "origin": [ 217.339, 156.644, 294.111 ], "x_axis": [ -0.146, 0.989, -0.025 ], "y_axis": [ -0.400, -0.082, -0.913 ], "z_axis": [ -0.905, -0.123, 0.407 ], "quaternion": [ 0.543, -0.364, -0.405, 0.639 ] } }, { "index": 363, "index_chain": 363, "chain_name": "a", "nt_resnum": 364, "nt_name": "G", "nt_code": "G", "nt_id": "///a/364", "linked_nts": [ "///a/363", "///a/365" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem,multiplet", "alpha": -55.285, "beta": 174.536, "gamma": 49.342, "delta": 79.334, "epsilon": -116.603, "zeta": -112.455, "epsilon_zeta": -4.148, "bb_type": "--", "chi": -175.207, "glyco_bond": "anti", "C5prime_xyz": [ -1.536, 8.623, 1.398 ], "P_xyz": [ 0.883, 9.068, 2.285 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.517, "theta": -126.638, "eta_prime": -168.850, "theta_prime": -132.592, "eta_base": -124.330, "theta_base": -118.254, "v0": -0.112, "v1": -23.179, "v2": 36.368, "v3": -37.408, "v4": 23.634, "amplitude": 38.405, "phase_angle": 18.741, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.646, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 214.105, 157.874, 297.381 ], "x_axis": [ -0.314, 0.708, -0.632 ], "y_axis": [ -0.043, -0.676, -0.736 ], "z_axis": [ -0.948, -0.204, 0.242 ], "quaternion": [ 0.251, -0.529, -0.315, 0.747 ] } }, { "index": 364, "index_chain": 364, "chain_name": "a", "nt_resnum": 365, "nt_name": "A", "nt_code": "A", "nt_id": "///a/365", "linked_nts": [ "///a/364", "///a/366" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix-end,stem-end,multiplet", "alpha": 103.118, "beta": -123.371, "gamma": -153.795, "delta": 80.489, "epsilon": -132.785, "zeta": -82.481, "epsilon_zeta": -50.304, "bb_type": "BI", "chi": -161.969, "glyco_bond": "anti", "C5prime_xyz": [ -1.202, 8.564, 0.624 ], "P_xyz": [ -0.620, 10.109, -1.385 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.225, "theta": -177.532, "eta_prime": 177.831, "theta_prime": -166.110, "eta_base": -151.677, "theta_base": -165.893, "v0": 6.379, "v1": -28.521, "v2": 38.830, "v3": -36.165, "v4": 18.770, "amplitude": 39.372, "phase_angle": 9.517, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.019, "origin": [ 211.798, 159.307, 299.021 ], "x_axis": [ -0.506, 0.432, -0.746 ], "y_axis": [ -0.276, -0.901, -0.335 ], "z_axis": [ -0.817, 0.036, 0.575 ], "quaternion": [ 0.205, -0.453, -0.087, 0.863 ] } }, { "index": 365, "index_chain": 365, "chain_name": "a", "nt_resnum": 366, "nt_name": "C", "nt_code": "C", "nt_id": "///a/366", "linked_nts": [ "///a/365", "///a/367" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical", "alpha": -48.751, "beta": 175.348, "gamma": 64.140, "delta": 137.877, "epsilon": -79.481, "zeta": 95.241, "epsilon_zeta": 185.277, "bb_type": "--", "chi": -114.718, "glyco_bond": "anti", "C5prime_xyz": [ -2.509, 8.504, -1.600 ], "P_xyz": [ -0.245, 9.758, -1.686 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -138.726, "theta": 119.462, "eta_prime": -124.452, "theta_prime": 101.967, "eta_base": -133.566, "theta_base": 90.508, "v0": -28.911, "v1": 39.134, "v2": -33.947, "v3": 18.170, "v4": 6.476, "amplitude": 38.570, "phase_angle": 151.660, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.703, "filter_rmsd": 0.062, "frame": { "rmsd": 0.011, "origin": [ 209.770, 161.554, 301.402 ], "x_axis": [ -0.230, 0.148, -0.962 ], "y_axis": [ -0.412, -0.910, -0.041 ], "z_axis": [ -0.882, 0.387, 0.270 ], "quaternion": [ 0.180, -0.594, 0.111, 0.776 ] } }, { "index": 366, "index_chain": 366, "chain_name": "a", "nt_resnum": 367, "nt_name": "A", "nt_code": "A", "nt_id": "///a/367", "linked_nts": [ "///a/366", "///a/368" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": 167.794, "beta": -143.085, "gamma": 43.311, "delta": 84.124, "epsilon": -151.975, "zeta": -74.937, "epsilon_zeta": -77.038, "bb_type": "BI", "chi": -174.465, "glyco_bond": "anti", "C5prime_xyz": [ -1.651, 8.537, 1.331 ], "P_xyz": [ 0.121, 8.851, 3.215 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 113.309, "theta": -152.055, "eta_prime": 99.423, "theta_prime": -143.941, "eta_base": 97.729, "theta_base": -110.970, "v0": -1.867, "v1": -19.572, "v2": 32.213, "v3": -34.146, "v4": 22.709, "amplitude": 34.633, "phase_angle": 21.549, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "6g", "suiteness": 0.068, "filter_rmsd": 0.040, "frame": { "rmsd": 0.017, "origin": [ 215.616, 156.998, 303.662 ], "x_axis": [ -0.387, -0.030, -0.921 ], "y_axis": [ -0.685, -0.660, 0.309 ], "z_axis": [ -0.618, 0.751, 0.235 ], "quaternion": [ 0.217, -0.509, 0.351, 0.755 ] } }, { "index": 367, "index_chain": 367, "chain_name": "a", "nt_resnum": 368, "nt_name": "A", "nt_code": "A", "nt_id": "///a/368", "linked_nts": [ "///a/367", "///a/369" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical", "alpha": -67.441, "beta": 167.454, "gamma": 68.481, "delta": 80.890, "epsilon": -113.396, "zeta": -92.902, "epsilon_zeta": -20.494, "bb_type": "--", "chi": 174.942, "glyco_bond": "anti", "C5prime_xyz": [ -1.572, 8.315, 1.907 ], "P_xyz": [ 0.973, 8.635, 2.395 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -176.383, "theta": -136.052, "eta_prime": -164.879, "theta_prime": -132.398, "eta_base": -126.248, "theta_base": -96.934, "v0": 1.290, "v1": -24.104, "v2": 36.470, "v3": -36.680, "v4": 22.307, "amplitude": 38.069, "phase_angle": 16.662, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.608, "filter_rmsd": 0.048, "frame": { "rmsd": 0.017, "origin": [ 213.698, 161.719, 304.067 ], "x_axis": [ -0.728, -0.355, -0.587 ], "y_axis": [ -0.158, -0.746, 0.647 ], "z_axis": [ -0.667, 0.564, 0.487 ], "quaternion": [ -0.057, -0.364, 0.352, 0.860 ] } }, { "index": 368, "index_chain": 368, "chain_name": "a", "nt_resnum": 369, "nt_name": "U", "nt_code": "U", "nt_id": "///a/369", "linked_nts": [ "///a/368", "///a/370" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -60.387, "beta": 159.365, "gamma": 49.843, "delta": 82.527, "epsilon": -138.316, "zeta": -60.622, "epsilon_zeta": -77.694, "bb_type": "BI", "chi": -144.926, "glyco_bond": "anti", "C5prime_xyz": [ -1.455, 8.652, -0.362 ], "P_xyz": [ 1.117, 8.862, -0.756 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.392, "theta": -123.906, "eta_prime": 173.248, "theta_prime": -126.623, "eta_base": -137.368, "theta_base": -87.808, "v0": 4.488, "v1": -25.929, "v2": 36.361, "v3": -34.679, "v4": 19.064, "amplitude": 37.142, "phase_angle": 11.774, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.289, "filter_rmsd": 0.117, "frame": { "rmsd": 0.026, "origin": [ 211.564, 163.185, 304.012 ], "x_axis": [ -0.640, -0.767, -0.038 ], "y_axis": [ 0.084, -0.119, 0.989 ], "z_axis": [ -0.764, 0.630, 0.141 ], "quaternion": [ -0.309, -0.291, 0.587, 0.689 ] } }, { "index": 369, "index_chain": 369, "chain_name": "a", "nt_resnum": 370, "nt_name": "G", "nt_code": "G", "nt_id": "///a/370", "linked_nts": [ "///a/369", "///a/371" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -74.124, "beta": 169.131, "gamma": 76.329, "delta": 65.237, "epsilon": -145.696, "zeta": -71.310, "epsilon_zeta": -74.387, "bb_type": "BI", "chi": -100.778, "glyco_bond": "anti", "C5prime_xyz": [ -2.938, 8.092, -2.455 ], "P_xyz": [ -1.948, 8.067, -4.848 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.212, "theta": -158.497, "eta_prime": -174.776, "theta_prime": -156.896, "eta_base": -119.949, "theta_base": -142.028, "v0": -6.720, "v1": -21.894, "v2": 40.934, "v3": -45.850, "v4": 33.026, "amplitude": 45.869, "phase_angle": 26.823, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.116, "filter_rmsd": 0.028, "frame": { "rmsd": 0.028, "origin": [ 208.351, 162.341, 304.305 ], "x_axis": [ -0.826, -0.507, 0.245 ], "y_axis": [ -0.213, 0.683, 0.699 ], "z_axis": [ -0.522, 0.525, -0.672 ], "quaternion": [ -0.215, -0.202, 0.892, 0.343 ] } }, { "index": 370, "index_chain": 370, "chain_name": "a", "nt_resnum": 371, "nt_name": "G", "nt_code": "G", "nt_id": "///a/371", "linked_nts": [ "///a/370", "///a/372" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -71.363, "beta": 164.864, "gamma": 76.047, "delta": 73.930, "epsilon": -135.079, "zeta": -75.524, "epsilon_zeta": -59.555, "bb_type": "BI", "chi": -161.840, "glyco_bond": "anti", "C5prime_xyz": [ -1.668, 8.875, 0.540 ], "P_xyz": [ 0.664, 9.757, -0.151 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.339, "theta": -144.702, "eta_prime": -175.184, "theta_prime": -143.834, "eta_base": -152.788, "theta_base": -114.773, "v0": -2.170, "v1": -23.769, "v2": 39.313, "v3": -41.561, "v4": 27.584, "amplitude": 42.239, "phase_angle": 21.453, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.111, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 202.298, 163.202, 304.318 ], "x_axis": [ 0.020, -0.643, 0.766 ], "y_axis": [ 0.400, 0.707, 0.583 ], "z_axis": [ -0.916, 0.294, 0.272 ], "quaternion": [ 0.707, 0.102, -0.595, -0.369 ] } }, { "index": 371, "index_chain": 371, "chain_name": "a", "nt_resnum": 372, "nt_name": "G", "nt_code": "G", "nt_id": "///a/372", "linked_nts": [ "///a/371", "///a/373" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -59.729, "beta": 179.552, "gamma": 41.935, "delta": 78.558, "epsilon": -146.268, "zeta": -73.618, "epsilon_zeta": -72.650, "bb_type": "BI", "chi": -148.474, "glyco_bond": "anti", "C5prime_xyz": [ -1.562, 8.816, -0.208 ], "P_xyz": [ 0.916, 9.629, -0.100 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.082, "theta": -149.812, "eta_prime": 174.316, "theta_prime": -146.415, "eta_base": -144.953, "theta_base": -119.906, "v0": 0.105, "v1": -23.621, "v2": 36.845, "v3": -37.701, "v4": 23.784, "amplitude": 38.834, "phase_angle": 18.417, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.641, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 199.210, 161.994, 306.177 ], "x_axis": [ 0.591, -0.184, 0.786 ], "y_axis": [ 0.142, 0.982, 0.123 ], "z_axis": [ -0.794, 0.039, 0.606 ], "quaternion": [ 0.892, 0.024, -0.443, -0.091 ] } }, { "index": 372, "index_chain": 372, "chain_name": "a", "nt_resnum": 373, "nt_name": "C", "nt_code": "C", "nt_id": "///a/373", "linked_nts": [ "///a/372", "///a/374" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -69.497, "beta": 166.330, "gamma": 61.499, "delta": 78.539, "epsilon": -138.274, "zeta": -72.548, "epsilon_zeta": -65.726, "bb_type": "BI", "chi": -148.105, "glyco_bond": "anti", "C5prime_xyz": [ -1.674, 8.834, -0.217 ], "P_xyz": [ 0.782, 9.432, -0.824 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.178, "theta": -138.820, "eta_prime": 178.371, "theta_prime": -139.052, "eta_base": -145.407, "theta_base": -110.109, "v0": -1.417, "v1": -22.493, "v2": 36.465, "v3": -38.282, "v4": 25.029, "amplitude": 38.962, "phase_angle": 20.623, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.853, "filter_rmsd": 0.065, "frame": { "rmsd": 0.014, "origin": [ 197.721, 161.130, 308.763 ], "x_axis": [ 0.770, 0.288, 0.570 ], "y_axis": [ -0.307, 0.950, -0.065 ], "z_axis": [ -0.560, -0.125, 0.819 ], "quaternion": [ 0.941, 0.016, -0.300, 0.158 ] } }, { "index": 373, "index_chain": 373, "chain_name": "a", "nt_resnum": 374, "nt_name": "G", "nt_code": "G", "nt_id": "///a/374", "linked_nts": [ "///a/373", "///a/375" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -64.967, "beta": 173.355, "gamma": 53.159, "delta": 77.331, "epsilon": -142.611, "zeta": -18.678, "epsilon_zeta": -123.933, "bb_type": "--", "chi": -142.093, "glyco_bond": "anti", "C5prime_xyz": [ -1.703, 8.863, -0.615 ], "P_xyz": [ 0.704, 9.595, -1.268 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.663, "theta": -105.623, "eta_prime": 177.553, "theta_prime": -111.759, "eta_base": -140.665, "theta_base": -122.071, "v0": -2.190, "v1": -22.322, "v2": 36.920, "v3": -39.172, "v4": 26.093, "amplitude": 39.726, "phase_angle": 21.663, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.909, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 197.930, 161.047, 312.558 ], "x_axis": [ 0.605, 0.774, 0.187 ], "y_axis": [ -0.765, 0.631, -0.134 ], "z_axis": [ -0.221, -0.062, 0.973 ], "quaternion": [ 0.896, -0.020, -0.114, 0.429 ] } }, { "index": 374, "index_chain": 374, "chain_name": "a", "nt_resnum": 375, "nt_name": "A", "nt_code": "A", "nt_id": "///a/375", "linked_nts": [ "///a/374", "///a/376" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": -120.512, "beta": 128.719, "gamma": -155.325, "delta": 80.645, "epsilon": -110.895, "zeta": -106.863, "epsilon_zeta": -4.033, "bb_type": "--", "chi": -169.157, "glyco_bond": "anti", "C5prime_xyz": [ -1.497, 8.617, 1.034 ], "P_xyz": [ -1.917, 11.189, 0.872 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -118.164, "theta": 156.854, "eta_prime": -104.729, "theta_prime": 127.866, "eta_base": -92.787, "theta_base": 95.594, "v0": 1.424, "v1": -23.852, "v2": 36.129, "v3": -36.216, "v4": 22.007, "amplitude": 37.682, "phase_angle": 16.504, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.035, "frame": { "rmsd": 0.007, "origin": [ 199.106, 163.772, 320.824 ], "x_axis": [ -0.144, 0.735, 0.663 ], "y_axis": [ -0.834, 0.271, -0.480 ], "z_axis": [ -0.532, -0.622, 0.574 ], "quaternion": [ 0.652, 0.054, -0.458, 0.601 ] } }, { "index": 375, "index_chain": 375, "chain_name": "a", "nt_resnum": 376, "nt_name": "A", "nt_code": "A", "nt_id": "///a/376", "linked_nts": [ "///a/375", "///a/377" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": 35.722, "beta": -119.617, "gamma": 111.049, "delta": 83.633, "epsilon": 172.667, "zeta": -92.405, "epsilon_zeta": -94.927, "bb_type": "BI", "chi": -142.104, "glyco_bond": "anti", "C5prime_xyz": [ -1.620, 8.623, -0.607 ], "P_xyz": [ 0.819, 8.046, -1.484 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -4.159, "theta": -137.494, "eta_prime": 19.140, "theta_prime": -162.057, "eta_base": 13.374, "theta_base": -163.273, "v0": 2.124, "v1": -24.061, "v2": 35.300, "v3": -34.929, "v4": 20.798, "amplitude": 36.582, "phase_angle": 15.212, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.036, "frame": { "rmsd": 0.018, "origin": [ 190.004, 155.610, 311.823 ], "x_axis": [ -0.380, 0.785, -0.489 ], "y_axis": [ 0.313, 0.607, 0.730 ], "z_axis": [ 0.870, 0.124, -0.476 ], "quaternion": [ 0.433, 0.350, 0.785, 0.272 ] } }, { "index": 376, "index_chain": 376, "chain_name": "a", "nt_resnum": 377, "nt_name": "A", "nt_code": "A", "nt_id": "///a/377", "linked_nts": [ "///a/376", "///a/378" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": 158.198, "beta": -141.670, "gamma": 162.942, "delta": 85.928, "epsilon": 175.175, "zeta": 30.378, "epsilon_zeta": 144.797, "bb_type": "--", "chi": -170.440, "glyco_bond": "anti", "C5prime_xyz": [ -1.221, 8.426, 1.145 ], "P_xyz": [ 0.686, 9.293, -0.467 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.379, "theta": -84.995, "eta_prime": -179.918, "theta_prime": -97.682, "eta_base": -153.014, "theta_base": -66.243, "v0": 7.600, "v1": -26.763, "v2": 34.683, "v3": -31.190, "v4": 15.010, "amplitude": 34.896, "phase_angle": 6.328, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.262, "filter_rmsd": 0.039, "frame": { "rmsd": 0.013, "origin": [ 192.384, 154.471, 309.818 ], "x_axis": [ -0.208, 0.935, -0.287 ], "y_axis": [ 0.545, 0.355, 0.760 ], "z_axis": [ 0.812, 0.002, -0.583 ], "quaternion": [ 0.375, 0.505, 0.733, 0.260 ] } }, { "index": 377, "index_chain": 377, "chain_name": "a", "nt_resnum": 378, "nt_name": "G", "nt_code": "G", "nt_id": "///a/378", "linked_nts": [ "///a/377", "///a/379" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -154.035, "beta": 144.518, "gamma": 123.798, "delta": 83.855, "epsilon": -140.216, "zeta": -71.469, "epsilon_zeta": -68.747, "bb_type": "BI", "chi": -167.348, "glyco_bond": "anti", "C5prime_xyz": [ -1.112, 8.559, 0.953 ], "P_xyz": [ 0.521, 9.718, -0.741 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.369, "theta": -155.060, "eta_prime": -150.139, "theta_prime": -155.871, "eta_base": -73.147, "theta_base": -118.600, "v0": 5.340, "v1": -26.206, "v2": 35.914, "v3": -33.807, "v4": 18.006, "amplitude": 36.513, "phase_angle": 10.390, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 197.344, 161.103, 308.511 ], "x_axis": [ 0.823, 0.419, 0.383 ], "y_axis": [ 0.270, -0.882, 0.386 ], "z_axis": [ 0.499, -0.214, -0.840 ], "quaternion": [ 0.159, 0.941, 0.183, 0.234 ] } }, { "index": 378, "index_chain": 378, "chain_name": "a", "nt_resnum": 379, "nt_name": "C", "nt_code": "C", "nt_id": "///a/379", "linked_nts": [ "///a/378", "///a/380" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -70.921, "beta": 164.361, "gamma": 63.198, "delta": 79.004, "epsilon": -137.367, "zeta": -73.452, "epsilon_zeta": -63.916, "bb_type": "BI", "chi": -160.438, "glyco_bond": "anti", "C5prime_xyz": [ -1.305, 8.756, 0.572 ], "P_xyz": [ 1.267, 9.090, 0.241 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.305, "theta": -139.778, "eta_prime": -178.408, "theta_prime": -143.732, "eta_base": -123.767, "theta_base": -139.868, "v0": 3.191, "v1": -26.523, "v2": 38.585, "v3": -37.651, "v4": 21.736, "amplitude": 39.771, "phase_angle": 14.029, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.789, "filter_rmsd": 0.072, "frame": { "rmsd": 0.017, "origin": [ 199.934, 161.954, 306.559 ], "x_axis": [ 0.799, -0.220, 0.559 ], "y_axis": [ -0.207, -0.974, -0.087 ], "z_axis": [ 0.564, -0.046, -0.824 ], "quaternion": [ -0.011, 0.948, -0.113, 0.296 ] } }, { "index": 379, "index_chain": 379, "chain_name": "a", "nt_resnum": 380, "nt_name": "C", "nt_code": "C", "nt_id": "///a/380", "linked_nts": [ "///a/379", "///a/381" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end,stem-end", "alpha": -98.454, "beta": 162.033, "gamma": 89.989, "delta": 76.553, "epsilon": -125.752, "zeta": -79.863, "epsilon_zeta": -45.889, "bb_type": "--", "chi": -149.079, "glyco_bond": "anti", "C5prime_xyz": [ -1.785, 8.881, -0.176 ], "P_xyz": [ 0.290, 9.554, -1.602 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.524, "theta": -139.288, "eta_prime": 173.626, "theta_prime": -138.652, "eta_base": -168.544, "theta_base": -108.733, "v0": -3.061, "v1": -21.511, "v2": 36.565, "v3": -39.301, "v4": 26.698, "amplitude": 39.694, "phase_angle": 22.905, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.061, "frame": { "rmsd": 0.012, "origin": [ 201.623, 163.398, 305.145 ], "x_axis": [ 0.605, -0.532, 0.592 ], "y_axis": [ -0.167, -0.812, -0.559 ], "z_axis": [ 0.778, 0.239, -0.581 ], "quaternion": [ -0.230, 0.866, -0.202, 0.396 ] } }, { "index": 380, "index_chain": 380, "chain_name": "a", "nt_resnum": 381, "nt_name": "U", "nt_code": "U", "nt_id": "///a/381", "linked_nts": [ "///a/380", "///a/382" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -49.679, "beta": 170.568, "gamma": 41.111, "delta": 79.923, "epsilon": -137.662, "zeta": -151.179, "epsilon_zeta": 13.517, "bb_type": "--", "chi": -127.442, "glyco_bond": "anti", "C5prime_xyz": [ -2.040, 8.534, -1.371 ], "P_xyz": [ 0.344, 9.388, -1.960 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.448, "theta": 164.121, "eta_prime": 179.967, "theta_prime": 139.517, "eta_base": -139.907, "theta_base": -112.501, "v0": -2.433, "v1": -20.421, "v2": 34.235, "v3": -36.611, "v4": 24.640, "amplitude": 37.009, "phase_angle": 22.323, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.484, "filter_rmsd": 0.105, "frame": { "rmsd": 0.017, "origin": [ 205.180, 162.559, 305.089 ], "x_axis": [ 0.008, -0.918, 0.397 ], "y_axis": [ -0.144, -0.394, -0.908 ], "z_axis": [ 0.990, -0.050, -0.135 ], "quaternion": [ -0.346, 0.620, -0.428, 0.559 ] } }, { "index": 381, "index_chain": 381, "chain_name": "a", "nt_resnum": 382, "nt_name": "G", "nt_code": "G", "nt_id": "///a/382", "linked_nts": [ "///a/381", "///a/383" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": 54.488, "beta": 175.461, "gamma": 100.694, "delta": 155.937, "epsilon": -133.937, "zeta": 60.284, "epsilon_zeta": 165.779, "bb_type": "--", "chi": -100.610, "glyco_bond": "anti", "C5prime_xyz": [ -2.201, 8.020, -1.989 ], "P_xyz": [ 0.244, 8.010, -2.894 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -18.621, "theta": 89.350, "eta_prime": 16.580, "theta_prime": 20.366, "eta_base": -106.197, "theta_base": 20.992, "v0": -21.033, "v1": 38.198, "v2": -39.861, "v3": 28.694, "v4": -5.021, "amplitude": 40.714, "phase_angle": 168.251, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 209.270, 157.825, 287.995 ], "x_axis": [ -0.840, -0.539, -0.064 ], "y_axis": [ -0.430, 0.589, 0.685 ], "z_axis": [ -0.331, 0.603, -0.726 ], "quaternion": [ -0.075, -0.273, 0.888, 0.362 ] } }, { "index": 382, "index_chain": 382, "chain_name": "a", "nt_resnum": 383, "nt_name": "A", "nt_code": "A", "nt_id": "///a/383", "linked_nts": [ "///a/382", "///a/384" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 90.367, "beta": 137.986, "gamma": 161.687, "delta": 87.531, "epsilon": 173.355, "zeta": 31.481, "epsilon_zeta": 141.874, "bb_type": "--", "chi": -166.028, "glyco_bond": "anti", "C5prime_xyz": [ -0.926, 8.310, 0.929 ], "P_xyz": [ -0.047, 10.313, -0.442 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 96.821, "theta": -117.987, "eta_prime": 110.989, "theta_prime": -114.151, "eta_base": 124.702, "theta_base": -60.827, "v0": 8.934, "v1": -27.214, "v2": 34.109, "v3": -29.950, "v4": 13.411, "amplitude": 34.189, "phase_angle": 3.930, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "6j", "suiteness": 0.141, "filter_rmsd": 0.044, "frame": { "rmsd": 0.036, "origin": [ 208.730, 165.297, 302.926 ], "x_axis": [ -0.224, -0.966, -0.131 ], "y_axis": [ 0.178, 0.091, -0.980 ], "z_axis": [ 0.958, -0.242, 0.152 ], "quaternion": [ 0.505, -0.365, 0.539, -0.567 ] } }, { "index": 383, "index_chain": 383, "chain_name": "a", "nt_resnum": 384, "nt_name": "U", "nt_code": "U", "nt_id": "///a/384", "linked_nts": [ "///a/383", "///a/385" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix-end,stem-end,multiplet", "alpha": -174.411, "beta": 153.507, "gamma": 118.026, "delta": 83.807, "epsilon": -109.156, "zeta": -98.454, "epsilon_zeta": -10.701, "bb_type": "--", "chi": -150.816, "glyco_bond": "anti", "C5prime_xyz": [ -1.499, 8.695, -0.009 ], "P_xyz": [ 0.088, 9.462, -1.904 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 147.025, "theta": -147.263, "eta_prime": -170.086, "theta_prime": -142.426, "eta_base": -92.770, "theta_base": -106.547, "v0": 1.087, "v1": -22.958, "v2": 34.804, "v3": -35.143, "v4": 21.497, "amplitude": 36.379, "phase_angle": 16.925, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.110, "frame": { "rmsd": 0.019, "origin": [ 210.447, 159.955, 299.314 ], "x_axis": [ 0.173, -0.255, -0.951 ], "y_axis": [ 0.615, 0.783, -0.098 ], "z_axis": [ 0.770, -0.568, 0.292 ], "quaternion": [ 0.750, 0.157, 0.574, -0.290 ] } }, { "index": 384, "index_chain": 384, "chain_name": "a", "nt_resnum": 385, "nt_name": "C", "nt_code": "C", "nt_id": "///a/385", "linked_nts": [ "///a/384", "///a/386" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -39.277, "beta": 144.331, "gamma": 48.235, "delta": 80.680, "epsilon": -143.071, "zeta": -76.220, "epsilon_zeta": -66.851, "bb_type": "BI", "chi": -151.093, "glyco_bond": "anti", "C5prime_xyz": [ -1.635, 8.855, -0.017 ], "P_xyz": [ 0.932, 9.131, -0.350 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.934, "theta": -108.503, "eta_prime": -175.378, "theta_prime": -124.808, "eta_base": -128.692, "theta_base": -109.497, "v0": -2.438, "v1": -20.602, "v2": 34.468, "v3": -36.885, "v4": 24.805, "amplitude": 37.256, "phase_angle": 22.308, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.551, "filter_rmsd": 0.063, "frame": { "rmsd": 0.016, "origin": [ 214.733, 158.028, 297.153 ], "x_axis": [ 0.098, 0.604, -0.791 ], "y_axis": [ 0.398, 0.704, 0.588 ], "z_axis": [ 0.912, -0.373, -0.171 ], "quaternion": [ 0.639, 0.376, 0.667, 0.081 ] } }, { "index": 385, "index_chain": 385, "chain_name": "a", "nt_resnum": 386, "nt_name": "C", "nt_code": "C", "nt_id": "///a/386", "linked_nts": [ "///a/385", "///a/387" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 111.140, "beta": -155.567, "gamma": -142.457, "delta": 78.915, "epsilon": -153.817, "zeta": -73.465, "epsilon_zeta": -80.353, "bb_type": "BI", "chi": -158.871, "glyco_bond": "anti", "C5prime_xyz": [ -1.423, 8.814, 0.443 ], "P_xyz": [ -1.033, 10.958, -0.978 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.004, "theta": -167.740, "eta_prime": 178.897, "theta_prime": -164.661, "eta_base": -143.255, "theta_base": -128.791, "v0": 0.061, "v1": -23.787, "v2": 37.177, "v3": -38.076, "v4": 24.066, "amplitude": 39.204, "phase_angle": 18.505, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.066, "frame": { "rmsd": 0.012, "origin": [ 216.690, 157.250, 293.833 ], "x_axis": [ 0.090, 0.886, -0.456 ], "y_axis": [ 0.507, 0.353, 0.786 ], "z_axis": [ 0.857, -0.302, -0.418 ], "quaternion": [ 0.506, 0.537, 0.648, 0.187 ] } }, { "index": 386, "index_chain": 386, "chain_name": "a", "nt_resnum": 387, "nt_name": "A", "nt_code": "A", "nt_id": "///a/387", "linked_nts": [ "///a/386", "///a/388" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix", "alpha": 170.061, "beta": -165.643, "gamma": 158.372, "delta": 81.982, "epsilon": -138.977, "zeta": -64.574, "epsilon_zeta": -74.402, "bb_type": "BI", "chi": -178.548, "glyco_bond": "anti", "C5prime_xyz": [ -1.280, 8.336, 1.597 ], "P_xyz": [ 0.611, 9.798, 0.554 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.797, "theta": -147.882, "eta_prime": 174.481, "theta_prime": -147.796, "eta_base": -135.124, "theta_base": -115.909, "v0": 5.284, "v1": -27.059, "v2": 37.470, "v3": -35.379, "v4": 19.008, "amplitude": 38.149, "phase_angle": 10.822, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.300, "filter_rmsd": 0.044, "frame": { "rmsd": 0.014, "origin": [ 219.427, 157.976, 290.456 ], "x_axis": [ 0.118, 0.967, 0.225 ], "y_axis": [ 0.400, -0.254, 0.881 ], "z_axis": [ 0.909, -0.014, -0.417 ], "quaternion": [ 0.334, 0.669, 0.511, 0.424 ] } }, { "index": 387, "index_chain": 387, "chain_name": "a", "nt_resnum": 388, "nt_name": "G", "nt_code": "G", "nt_id": "///a/388", "linked_nts": [ "///a/387", "///a/389" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -68.704, "beta": -174.766, "gamma": 49.095, "delta": 78.853, "epsilon": -138.653, "zeta": -79.486, "epsilon_zeta": -59.168, "bb_type": "BI", "chi": -173.227, "glyco_bond": "anti", "C5prime_xyz": [ -1.457, 8.635, 1.264 ], "P_xyz": [ 0.941, 9.128, 2.189 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.526, "theta": -146.205, "eta_prime": -178.657, "theta_prime": -140.043, "eta_base": -131.121, "theta_base": -106.857, "v0": 0.544, "v1": -23.879, "v2": 36.862, "v3": -37.507, "v4": 23.364, "amplitude": 38.718, "phase_angle": 17.810, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.877, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 222.455, 160.350, 287.969 ], "x_axis": [ 0.128, 0.541, 0.832 ], "y_axis": [ 0.118, -0.841, 0.528 ], "z_axis": [ 0.985, 0.031, -0.171 ], "quaternion": [ 0.170, 0.731, 0.225, 0.621 ] } }, { "index": 388, "index_chain": 388, "chain_name": "a", "nt_resnum": 389, "nt_name": "C", "nt_code": "C", "nt_id": "///a/389", "linked_nts": [ "///a/388", "///a/390" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -51.787, "beta": 163.800, "gamma": 54.052, "delta": 79.264, "epsilon": -140.583, "zeta": -72.810, "epsilon_zeta": -67.773, "bb_type": "BI", "chi": -163.226, "glyco_bond": "anti", "C5prime_xyz": [ -1.436, 8.841, 0.697 ], "P_xyz": [ 1.125, 9.321, 0.894 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.046, "theta": -139.589, "eta_prime": -171.387, "theta_prime": -136.159, "eta_base": -128.029, "theta_base": -106.227, "v0": -1.966, "v1": -21.386, "v2": 35.284, "v3": -37.409, "v4": 24.810, "amplitude": 37.925, "phase_angle": 21.511, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.781, "filter_rmsd": 0.066, "frame": { "rmsd": 0.012, "origin": [ 225.680, 162.516, 287.842 ], "x_axis": [ 0.129, -0.062, 0.990 ], "y_axis": [ 0.080, -0.994, -0.073 ], "z_axis": [ 0.988, 0.089, -0.123 ], "quaternion": [ -0.054, 0.749, 0.006, 0.660 ] } }, { "index": 389, "index_chain": 389, "chain_name": "a", "nt_resnum": 390, "nt_name": "C", "nt_code": "C", "nt_id": "///a/390", "linked_nts": [ "///a/389", "///a/391" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -67.824, "beta": -172.572, "gamma": 43.861, "delta": 83.593, "epsilon": -140.341, "zeta": -65.007, "epsilon_zeta": -75.334, "bb_type": "BI", "chi": -149.957, "glyco_bond": "anti", "C5prime_xyz": [ -1.386, 8.750, -0.025 ], "P_xyz": [ 1.111, 9.275, 0.543 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.296, "theta": -120.033, "eta_prime": 177.763, "theta_prime": -141.205, "eta_base": -142.732, "theta_base": -161.261, "v0": 2.615, "v1": -23.418, "v2": 34.219, "v3": -33.652, "v4": 19.590, "amplitude": 35.343, "phase_angle": 14.486, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.774, "filter_rmsd": 0.068, "frame": { "rmsd": 0.013, "origin": [ 229.487, 163.408, 289.120 ], "x_axis": [ -0.249, -0.658, 0.711 ], "y_axis": [ 0.054, -0.742, -0.668 ], "z_axis": [ 0.967, -0.128, 0.221 ], "quaternion": [ -0.239, 0.564, -0.268, 0.744 ] } }, { "index": 390, "index_chain": 390, "chain_name": "a", "nt_resnum": 391, "nt_name": "A", "nt_code": "A", "nt_id": "///a/391", "linked_nts": [ "///a/390", "///a/392" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,BI,non-canonical,helix-end,multiplet", "alpha": -169.740, "beta": 160.081, "gamma": -62.158, "delta": 85.685, "epsilon": -170.101, "zeta": -108.585, "epsilon_zeta": -61.516, "bb_type": "BI", "chi": 72.814, "glyco_bond": "syn", "C5prime_xyz": [ -4.699, 4.575, 2.516 ], "P_xyz": [ -6.702, 3.189, 3.431 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -59.060, "theta": 135.384, "eta_prime": -50.467, "theta_prime": 120.650, "eta_base": -42.483, "theta_base": 81.128, "v0": -0.050, "v1": -19.975, "v2": 31.037, "v3": -32.047, "v4": 20.339, "amplitude": 32.780, "phase_angle": 18.770, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.052, "frame": { "rmsd": 0.024, "origin": [ 242.382, 159.673, 281.190 ], "x_axis": [ 0.934, -0.173, 0.314 ], "y_axis": [ -0.254, 0.299, 0.920 ], "z_axis": [ -0.253, -0.938, 0.236 ], "quaternion": [ 0.786, 0.591, -0.180, 0.026 ] } }, { "index": 391, "index_chain": 391, "chain_name": "a", "nt_resnum": 392, "nt_name": "U", "nt_code": "U", "nt_id": "///a/392", "linked_nts": [ "///a/391", "///a/393" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI,canonical,helix,stem-end", "alpha": -152.963, "beta": 159.725, "gamma": 40.188, "delta": 80.146, "epsilon": -151.100, "zeta": -61.708, "epsilon_zeta": -89.392, "bb_type": "BI", "chi": -174.637, "glyco_bond": "anti", "C5prime_xyz": [ -1.390, 8.586, 1.350 ], "P_xyz": [ 1.104, 8.780, 2.126 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 67.100, "theta": -136.560, "eta_prime": 63.160, "theta_prime": -142.968, "eta_base": 84.797, "theta_base": -134.559, "v0": 1.113, "v1": -24.049, "v2": 36.526, "v3": -36.759, "v4": 22.487, "amplitude": 38.168, "phase_angle": 16.867, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.106, "frame": { "rmsd": 0.013, "origin": [ 232.985, 164.786, 291.223 ], "x_axis": [ -0.031, -0.999, -0.010 ], "y_axis": [ 0.064, 0.008, -0.998 ], "z_axis": [ 0.997, -0.032, 0.064 ], "quaternion": [ 0.510, -0.474, 0.494, -0.521 ] } }, { "index": 392, "index_chain": 392, "chain_name": "a", "nt_resnum": 393, "nt_name": "G", "nt_code": "G", "nt_id": "///a/393", "linked_nts": [ "///a/392", "///a/394" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -137.205, "beta": 154.989, "gamma": 128.521, "delta": 83.820, "epsilon": -127.037, "zeta": -74.842, "epsilon_zeta": -52.195, "bb_type": "--", "chi": -173.234, "glyco_bond": "anti", "C5prime_xyz": [ -1.245, 8.500, 1.335 ], "P_xyz": [ 0.640, 9.830, 0.106 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.203, "theta": -154.343, "eta_prime": 177.932, "theta_prime": -157.613, "eta_base": -157.735, "theta_base": -141.749, "v0": 3.594, "v1": -24.512, "v2": 34.972, "v3": -33.853, "v4": 19.113, "amplitude": 35.893, "phase_angle": 13.005, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 235.091, 164.810, 293.933 ], "x_axis": [ 0.076, -0.913, -0.400 ], "y_axis": [ 0.287, 0.404, -0.868 ], "z_axis": [ 0.955, -0.049, 0.293 ], "quaternion": [ 0.666, -0.308, 0.509, -0.451 ] } }, { "index": 393, "index_chain": 393, "chain_name": "a", "nt_resnum": 394, "nt_name": "C", "nt_code": "C", "nt_id": "///a/394", "linked_nts": [ "///a/393", "///a/395" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem,multiplet", "alpha": -105.611, "beta": 148.210, "gamma": 99.492, "delta": 78.819, "epsilon": -125.618, "zeta": -72.664, "epsilon_zeta": -52.953, "bb_type": "--", "chi": -156.714, "glyco_bond": "anti", "C5prime_xyz": [ -1.387, 8.793, 0.297 ], "P_xyz": [ 0.555, 9.370, -1.345 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.152, "theta": -135.877, "eta_prime": 172.939, "theta_prime": -139.731, "eta_base": -156.998, "theta_base": -107.233, "v0": 1.810, "v1": -25.314, "v2": 37.925, "v3": -37.862, "v4": 22.752, "amplitude": 39.456, "phase_angle": 16.009, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.071, "frame": { "rmsd": 0.016, "origin": [ 236.635, 163.841, 295.747 ], "x_axis": [ 0.260, -0.665, -0.700 ], "y_axis": [ 0.585, 0.685, -0.434 ], "z_axis": [ 0.768, -0.296, 0.568 ], "quaternion": [ 0.793, -0.043, 0.463, -0.394 ] } }, { "index": 394, "index_chain": 394, "chain_name": "a", "nt_resnum": 395, "nt_name": "C", "nt_code": "C", "nt_id": "///a/395", "linked_nts": [ "///a/394", "///a/396" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -86.340, "beta": 170.810, "gamma": 69.642, "delta": 77.583, "epsilon": -146.898, "zeta": -79.032, "epsilon_zeta": -67.866, "bb_type": "BI", "chi": -152.561, "glyco_bond": "anti", "C5prime_xyz": [ -1.562, 8.807, 0.076 ], "P_xyz": [ 0.886, 9.344, -0.619 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 151.387, "theta": -151.692, "eta_prime": 170.986, "theta_prime": -153.486, "eta_base": -137.505, "theta_base": -136.175, "v0": 1.717, "v1": -25.742, "v2": 38.683, "v3": -38.648, "v4": 23.219, "amplitude": 40.266, "phase_angle": 16.120, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.330, "filter_rmsd": 0.068, "frame": { "rmsd": 0.015, "origin": [ 239.675, 161.151, 295.481 ], "x_axis": [ 0.213, 0.091, -0.973 ], "y_axis": [ 0.486, 0.854, 0.186 ], "z_axis": [ 0.848, -0.512, 0.138 ], "quaternion": [ 0.742, 0.235, 0.613, -0.133 ] } }, { "index": 395, "index_chain": 395, "chain_name": "a", "nt_resnum": 396, "nt_name": "G", "nt_code": "G", "nt_id": "///a/396", "linked_nts": [ "///a/395", "///a/397" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -64.034, "beta": 165.181, "gamma": 63.701, "delta": 75.860, "epsilon": -145.561, "zeta": -76.174, "epsilon_zeta": -69.387, "bb_type": "BI", "chi": -167.083, "glyco_bond": "anti", "C5prime_xyz": [ -1.612, 8.733, 0.901 ], "P_xyz": [ 0.896, 9.400, 0.711 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.029, "theta": -148.859, "eta_prime": 179.499, "theta_prime": -148.405, "eta_base": -148.953, "theta_base": -124.959, "v0": 0.364, "v1": -25.821, "v2": 40.161, "v3": -40.851, "v4": 25.517, "amplitude": 42.230, "phase_angle": 18.009, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.745, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 242.547, 158.047, 294.823 ], "x_axis": [ 0.169, 0.567, -0.806 ], "y_axis": [ 0.329, 0.739, 0.588 ], "z_axis": [ 0.929, -0.365, -0.062 ], "quaternion": [ 0.679, 0.351, 0.639, 0.088 ] } }, { "index": 396, "index_chain": 396, "chain_name": "a", "nt_resnum": 397, "nt_name": "C", "nt_code": "C", "nt_id": "///a/397", "linked_nts": [ "///a/396", "///a/398" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -56.759, "beta": 176.872, "gamma": 52.176, "delta": 75.285, "epsilon": -170.073, "zeta": -89.190, "epsilon_zeta": -80.883, "bb_type": "BI", "chi": -168.719, "glyco_bond": "anti", "C5prime_xyz": [ -1.405, 8.787, 1.005 ], "P_xyz": [ 1.089, 9.346, 1.542 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.829, "theta": -146.147, "eta_prime": -176.380, "theta_prime": -150.744, "eta_base": -138.033, "theta_base": -135.719, "v0": -1.097, "v1": -24.113, "v2": 38.934, "v3": -40.474, "v4": 26.191, "amplitude": 41.436, "phase_angle": 20.015, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.817, "filter_rmsd": 0.066, "frame": { "rmsd": 0.014, "origin": [ 245.950, 155.924, 292.359 ], "x_axis": [ 0.106, 0.935, -0.338 ], "y_axis": [ 0.102, 0.328, 0.939 ], "z_axis": [ 0.989, -0.134, -0.060 ], "quaternion": [ 0.586, 0.458, 0.566, 0.356 ] } }, { "index": 397, "index_chain": 397, "chain_name": "a", "nt_resnum": 398, "nt_name": "G", "nt_code": "G", "nt_id": "///a/398", "linked_nts": [ "///a/397", "///a/399" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": 150.967, "beta": -145.945, "gamma": -176.824, "delta": 83.475, "epsilon": -116.093, "zeta": -77.852, "epsilon_zeta": -38.241, "bb_type": "--", "chi": -175.956, "glyco_bond": "anti", "C5prime_xyz": [ -0.874, 8.279, 1.495 ], "P_xyz": [ 0.859, 9.731, 0.214 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.182, "theta": -147.589, "eta_prime": -172.890, "theta_prime": -143.018, "eta_base": -143.621, "theta_base": -111.011, "v0": 8.565, "v1": -28.818, "v2": 37.162, "v3": -33.202, "v4": 15.526, "amplitude": 37.344, "phase_angle": 5.665, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.601, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 248.540, 154.756, 289.677 ], "x_axis": [ 0.413, 0.910, 0.025 ], "y_axis": [ 0.167, -0.103, 0.981 ], "z_axis": [ 0.895, -0.401, -0.194 ], "quaternion": [ 0.528, 0.654, 0.412, 0.352 ] } }, { "index": 398, "index_chain": 398, "chain_name": "a", "nt_resnum": 399, "nt_name": "U", "nt_code": "U", "nt_id": "///a/399", "linked_nts": [ "///a/398", "///a/400" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix", "alpha": -58.184, "beta": 155.936, "gamma": 66.809, "delta": 76.513, "epsilon": -142.265, "zeta": 38.186, "epsilon_zeta": 179.549, "bb_type": "--", "chi": -157.528, "glyco_bond": "anti", "C5prime_xyz": [ -1.796, 8.844, 0.330 ], "P_xyz": [ 0.585, 9.565, -0.396 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.808, "theta": 6.723, "eta_prime": -171.010, "theta_prime": 10.022, "eta_base": -122.498, "theta_base": -25.409, "v0": -2.384, "v1": -22.340, "v2": 37.221, "v3": -39.630, "v4": 26.445, "amplitude": 40.124, "phase_angle": 21.929, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.330, "filter_rmsd": 0.101, "frame": { "rmsd": 0.010, "origin": [ 251.903, 155.850, 287.971 ], "x_axis": [ 0.470, 0.678, 0.565 ], "y_axis": [ 0.107, -0.679, 0.726 ], "z_axis": [ 0.876, -0.281, -0.392 ], "quaternion": [ 0.316, 0.797, 0.246, 0.452 ] } }, { "index": 399, "index_chain": 399, "chain_name": "a", "nt_resnum": 400, "nt_name": "G", "nt_code": "G", "nt_id": "///a/400", "linked_nts": [ "///a/399", "///a/401" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 138.730, "beta": -116.599, "gamma": -171.426, "delta": 82.419, "epsilon": -132.137, "zeta": -79.596, "epsilon_zeta": -52.541, "bb_type": "BI", "chi": 173.332, "glyco_bond": "anti", "C5prime_xyz": [ -1.509, 8.321, 2.010 ], "P_xyz": [ 0.201, 9.748, 0.645 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -142.887, "theta": -161.639, "eta_prime": -105.100, "theta_prime": -161.566, "eta_base": -43.610, "theta_base": -137.515, "v0": 0.675, "v1": -22.509, "v2": 34.521, "v3": -35.091, "v4": 21.735, "amplitude": 36.211, "phase_angle": 17.570, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 258.912, 141.315, 296.591 ], "x_axis": [ 0.099, -0.650, -0.754 ], "y_axis": [ -0.434, 0.653, -0.620 ], "z_axis": [ 0.895, 0.389, -0.218 ], "quaternion": [ 0.619, -0.407, 0.666, -0.087 ] } }, { "index": 400, "index_chain": 400, "chain_name": "a", "nt_resnum": 401, "nt_name": "U", "nt_code": "U", "nt_id": "///a/401", "linked_nts": [ "///a/400", "///a/402" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -68.898, "beta": 173.522, "gamma": 53.311, "delta": 80.072, "epsilon": -143.462, "zeta": -73.417, "epsilon_zeta": -70.045, "bb_type": "BI", "chi": -163.462, "glyco_bond": "anti", "C5prime_xyz": [ -1.368, 8.709, 0.699 ], "P_xyz": [ 1.187, 9.141, 0.995 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.925, "theta": -143.412, "eta_prime": 175.447, "theta_prime": -142.078, "eta_base": -146.776, "theta_base": -120.118, "v0": 0.834, "v1": -24.063, "v2": 36.877, "v3": -37.332, "v4": 22.988, "amplitude": 38.631, "phase_angle": 17.334, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.820, "filter_rmsd": 0.110, "frame": { "rmsd": 0.014, "origin": [ 262.428, 141.108, 296.943 ], "x_axis": [ -0.156, -0.149, -0.977 ], "y_axis": [ -0.357, 0.930, -0.084 ], "z_axis": [ 0.921, 0.336, -0.198 ], "quaternion": [ 0.628, -0.167, 0.756, 0.083 ] } }, { "index": 401, "index_chain": 401, "chain_name": "a", "nt_resnum": 402, "nt_name": "G", "nt_code": "G", "nt_id": "///a/402", "linked_nts": [ "///a/401", "///a/403" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -71.455, "beta": 170.003, "gamma": 65.884, "delta": 78.574, "epsilon": -147.900, "zeta": -69.588, "epsilon_zeta": -78.311, "bb_type": "BI", "chi": -166.405, "glyco_bond": "anti", "C5prime_xyz": [ -1.665, 8.789, 0.841 ], "P_xyz": [ 0.843, 9.518, 0.783 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.963, "theta": -143.911, "eta_prime": -177.902, "theta_prime": -142.218, "eta_base": -141.602, "theta_base": -99.552, "v0": -1.397, "v1": -22.681, "v2": 36.712, "v3": -38.463, "v4": 25.149, "amplitude": 39.203, "phase_angle": 20.537, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.711, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 266.259, 140.697, 295.288 ], "x_axis": [ -0.453, 0.275, -0.848 ], "y_axis": [ -0.223, 0.886, 0.407 ], "z_axis": [ 0.863, 0.374, -0.340 ], "quaternion": [ 0.523, 0.016, 0.818, 0.239 ] } }, { "index": 402, "index_chain": 402, "chain_name": "a", "nt_resnum": 403, "nt_name": "U", "nt_code": "U", "nt_id": "///a/403", "linked_nts": [ "///a/402", "///a/404" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -73.863, "beta": 165.306, "gamma": 70.681, "delta": 82.239, "epsilon": -136.514, "zeta": -62.507, "epsilon_zeta": -74.007, "bb_type": "BI", "chi": -152.189, "glyco_bond": "anti", "C5prime_xyz": [ -1.593, 8.747, 0.045 ], "P_xyz": [ 0.891, 9.170, -0.677 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.494, "theta": -124.855, "eta_prime": -171.395, "theta_prime": -124.671, "eta_base": -113.786, "theta_base": -75.525, "v0": 1.084, "v1": -23.108, "v2": 35.136, "v3": -35.388, "v4": 21.668, "amplitude": 36.722, "phase_angle": 16.904, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.498, "filter_rmsd": 0.104, "frame": { "rmsd": 0.012, "origin": [ 267.707, 141.684, 292.481 ], "x_axis": [ -0.374, 0.807, -0.458 ], "y_axis": [ 0.353, 0.580, 0.734 ], "z_axis": [ 0.858, 0.113, -0.501 ], "quaternion": [ 0.420, 0.370, 0.783, 0.270 ] } }, { "index": 403, "index_chain": 403, "chain_name": "a", "nt_resnum": 404, "nt_name": "G", "nt_code": "G", "nt_id": "///a/404", "linked_nts": [ "///a/403", "///a/405" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -73.594, "beta": 165.557, "gamma": 66.379, "delta": 82.459, "epsilon": -111.061, "zeta": -114.566, "epsilon_zeta": 3.505, "bb_type": "--", "chi": -150.387, "glyco_bond": "anti", "C5prime_xyz": [ -1.343, 8.714, -0.051 ], "P_xyz": [ 1.153, 8.988, -0.777 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.355, "theta": -166.270, "eta_prime": -167.785, "theta_prime": -143.910, "eta_base": -102.159, "theta_base": -157.648, "v0": 3.802, "v1": -25.318, "v2": 35.968, "v3": -34.788, "v4": 19.582, "amplitude": 36.892, "phase_angle": 12.849, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.646, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 268.926, 146.069, 290.713 ], "x_axis": [ -0.074, 0.903, 0.422 ], "y_axis": [ 0.738, -0.235, 0.632 ], "z_axis": [ 0.670, 0.358, -0.650 ], "quaternion": [ 0.102, 0.673, 0.610, 0.406 ] } }, { "index": 404, "index_chain": 404, "chain_name": "a", "nt_resnum": 405, "nt_name": "A", "nt_code": "A", "nt_id": "///a/405", "linked_nts": [ "///a/404", "///a/406" ], "nt_type": "RNA", "dbn": ".", "summary": "non-canonical,helix,multiplet", "alpha": -58.224, "beta": -157.079, "gamma": 50.169, "delta": 143.251, "epsilon": -69.944, "zeta": 99.289, "epsilon_zeta": 190.767, "bb_type": "--", "chi": -55.568, "glyco_bond": "--", "C5prime_xyz": [ -3.689, 6.172, -3.134 ], "P_xyz": [ -1.996, 7.213, -4.831 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -126.918, "theta": 146.355, "eta_prime": -135.312, "theta_prime": 123.514, "eta_base": -165.949, "theta_base": 81.855, "v0": -23.591, "v1": 35.812, "v2": -33.627, "v3": 20.943, "v4": 1.439, "amplitude": 36.039, "phase_angle": 158.917, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.025, "filter_rmsd": 0.035, "frame": { "rmsd": 0.012, "origin": [ 274.453, 146.870, 285.274 ], "x_axis": [ -0.374, 0.882, 0.288 ], "y_axis": [ 0.745, 0.101, 0.659 ], "z_axis": [ 0.552, 0.461, -0.695 ], "quaternion": [ 0.090, 0.552, 0.736, 0.380 ] } }, { "index": 405, "index_chain": 405, "chain_name": "a", "nt_resnum": 406, "nt_name": "A", "nt_code": "A", "nt_id": "///a/406", "linked_nts": [ "///a/405", "///a/407" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-stack,non-canonical,multiplet", "alpha": 155.780, "beta": -134.650, "gamma": 12.702, "delta": 74.592, "epsilon": -175.867, "zeta": 40.572, "epsilon_zeta": 143.562, "bb_type": "--", "chi": 43.833, "glyco_bond": "syn", "C5prime_xyz": [ -5.608, 3.936, 0.771 ], "P_xyz": [ -7.057, 2.013, -0.229 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 78.781, "theta": -96.682, "eta_prime": 59.344, "theta_prime": -101.779, "eta_base": 58.743, "theta_base": -82.701, "v0": -2.528, "v1": -22.410, "v2": 37.434, "v3": -39.793, "v4": 26.667, "amplitude": 40.377, "phase_angle": 22.013, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.011, "origin": [ 275.891, 140.794, 286.502 ], "x_axis": [ -0.774, -0.303, -0.556 ], "y_axis": [ 0.633, -0.352, -0.689 ], "z_axis": [ 0.013, -0.885, 0.465 ], "quaternion": [ -0.291, -0.169, -0.489, 0.805 ] } }, { "index": 406, "index_chain": 406, "chain_name": "a", "nt_resnum": 407, "nt_name": "G", "nt_code": "G", "nt_id": "///a/407", "linked_nts": [ "///a/406", "///a/408" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": -104.057, "beta": -104.146, "gamma": 74.874, "delta": 139.797, "epsilon": -98.308, "zeta": 63.079, "epsilon_zeta": 198.613, "bb_type": "--", "chi": -100.047, "glyco_bond": "anti", "C5prime_xyz": [ -2.448, 8.052, -2.210 ], "P_xyz": [ -0.221, 9.053, -1.178 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -110.665, "theta": 80.681, "eta_prime": -62.607, "theta_prime": 73.502, "eta_base": -79.702, "theta_base": 117.372, "v0": -23.891, "v1": 35.381, "v2": -32.832, "v3": 19.967, "v4": 2.267, "amplitude": 35.502, "phase_angle": 157.637, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.007, "frame": { "rmsd": 0.007, "origin": [ 279.131, 151.436, 288.624 ], "x_axis": [ 0.750, -0.013, 0.661 ], "y_axis": [ 0.454, -0.717, -0.529 ], "z_axis": [ 0.481, 0.697, -0.533 ], "quaternion": [ -0.354, 0.866, 0.127, 0.330 ] } }, { "index": 407, "index_chain": 407, "chain_name": "a", "nt_resnum": 408, "nt_name": "A", "nt_code": "A", "nt_id": "///a/408", "linked_nts": [ "///a/407", "///a/409" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -106.346, "beta": -145.773, "gamma": 60.423, "delta": 77.835, "epsilon": -120.029, "zeta": -48.358, "epsilon_zeta": -71.671, "bb_type": "--", "chi": -179.541, "glyco_bond": "anti", "C5prime_xyz": [ -1.587, 8.522, 1.594 ], "P_xyz": [ 0.583, 8.706, 3.055 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -168.838, "theta": -123.011, "eta_prime": -164.230, "theta_prime": -128.845, "eta_base": -173.574, "theta_base": -56.129, "v0": -0.433, "v1": -23.251, "v2": 36.755, "v3": -38.000, "v4": 24.238, "amplitude": 38.923, "phase_angle": 19.212, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.009, "origin": [ 270.310, 142.547, 279.293 ], "x_axis": [ -0.298, 0.883, 0.363 ], "y_axis": [ 0.920, 0.164, 0.357 ], "z_axis": [ 0.256, 0.440, -0.861 ], "quaternion": [ -0.035, 0.591, 0.762, 0.262 ] } }, { "index": 408, "index_chain": 408, "chain_name": "a", "nt_resnum": 409, "nt_name": "A", "nt_code": "A", "nt_id": "///a/409", "linked_nts": [ "///a/408", "///a/410" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,non-canonical,helix,multiplet", "alpha": -115.454, "beta": 103.607, "gamma": 151.059, "delta": 80.032, "epsilon": -112.467, "zeta": -40.534, "epsilon_zeta": -71.933, "bb_type": "--", "chi": -17.901, "glyco_bond": "syn", "C5prime_xyz": [ -4.734, 4.327, -2.450 ], "P_xyz": [ -6.954, 3.380, -1.467 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.946, "theta": -134.038, "eta_prime": -175.629, "theta_prime": -122.010, "eta_base": -85.464, "theta_base": -99.364, "v0": 3.674, "v1": -26.535, "v2": 38.176, "v3": -37.075, "v4": 21.033, "amplitude": 39.238, "phase_angle": 13.358, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.055, "filter_rmsd": 0.042, "frame": { "rmsd": 0.015, "origin": [ 271.945, 146.669, 278.196 ], "x_axis": [ -0.957, 0.233, -0.175 ], "y_axis": [ -0.114, -0.851, -0.513 ], "z_axis": [ -0.268, -0.471, 0.840 ], "quaternion": [ 0.091, -0.116, -0.258, 0.955 ] } }, { "index": 409, "index_chain": 409, "chain_name": "a", "nt_resnum": 410, "nt_name": "G", "nt_code": "G", "nt_id": "///a/410", "linked_nts": [ "///a/409", "///a/411" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -82.184, "beta": 174.094, "gamma": 55.339, "delta": 78.061, "epsilon": -144.254, "zeta": -72.700, "epsilon_zeta": -71.554, "bb_type": "BI", "chi": -171.278, "glyco_bond": "anti", "C5prime_xyz": [ -1.282, 8.616, 1.152 ], "P_xyz": [ 1.305, 8.958, 1.482 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 138.558, "theta": -144.236, "eta_prime": 177.948, "theta_prime": -142.127, "eta_base": -129.498, "theta_base": -119.230, "v0": 3.537, "v1": -26.799, "v2": 38.706, "v3": -37.622, "v4": 21.521, "amplitude": 39.822, "phase_angle": 13.595, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.149, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 272.972, 149.641, 276.502 ], "x_axis": [ 0.943, -0.126, 0.308 ], "y_axis": [ 0.049, -0.864, -0.501 ], "z_axis": [ 0.329, 0.488, -0.808 ], "quaternion": [ -0.260, 0.951, -0.020, 0.168 ] } }, { "index": 410, "index_chain": 410, "chain_name": "a", "nt_resnum": 411, "nt_name": "G", "nt_code": "G", "nt_id": "///a/411", "linked_nts": [ "///a/410", "///a/412" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -63.890, "beta": 167.776, "gamma": 62.831, "delta": 78.083, "epsilon": -127.665, "zeta": -90.351, "epsilon_zeta": -37.315, "bb_type": "--", "chi": -171.384, "glyco_bond": "anti", "C5prime_xyz": [ -1.644, 8.729, 1.147 ], "P_xyz": [ 0.883, 9.358, 1.391 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.316, "theta": -145.788, "eta_prime": -172.176, "theta_prime": -142.340, "eta_base": -136.425, "theta_base": -108.287, "v0": -1.350, "v1": -22.384, "v2": 36.315, "v3": -38.079, "v4": 24.833, "amplitude": 38.781, "phase_angle": 20.541, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.815, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 274.931, 152.721, 275.331 ], "x_axis": [ 0.793, -0.600, 0.101 ], "y_axis": [ -0.426, -0.665, -0.614 ], "z_axis": [ 0.435, 0.444, -0.783 ], "quaternion": [ -0.294, 0.900, -0.285, 0.149 ] } }, { "index": 411, "index_chain": 411, "chain_name": "a", "nt_resnum": 412, "nt_name": "U", "nt_code": "U", "nt_id": "///a/412", "linked_nts": [ "///a/411", "///a/413" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -51.448, "beta": 154.471, "gamma": 51.587, "delta": 79.102, "epsilon": -144.973, "zeta": -72.497, "epsilon_zeta": -72.476, "bb_type": "BI", "chi": -166.602, "glyco_bond": "anti", "C5prime_xyz": [ -1.555, 8.736, 0.899 ], "P_xyz": [ 1.028, 9.116, 0.988 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.065, "theta": -141.918, "eta_prime": 179.024, "theta_prime": -143.266, "eta_base": -132.859, "theta_base": -109.734, "v0": 0.121, "v1": -23.668, "v2": 36.921, "v3": -37.795, "v4": 23.723, "amplitude": 38.903, "phase_angle": 18.367, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.502, "filter_rmsd": 0.106, "frame": { "rmsd": 0.009, "origin": [ 277.966, 153.989, 273.289 ], "x_axis": [ 0.280, -0.948, -0.149 ], "y_axis": [ -0.806, -0.148, -0.573 ], "z_axis": [ 0.522, 0.281, -0.806 ], "quaternion": [ -0.286, 0.747, -0.587, 0.125 ] } }, { "index": 412, "index_chain": 412, "chain_name": "a", "nt_resnum": 413, "nt_name": "C", "nt_code": "C", "nt_id": "///a/413", "linked_nts": [ "///a/412", "///a/414" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -75.026, "beta": 162.690, "gamma": 71.496, "delta": 81.122, "epsilon": -143.818, "zeta": -69.744, "epsilon_zeta": -74.074, "bb_type": "BI", "chi": -161.397, "glyco_bond": "anti", "C5prime_xyz": [ -1.396, 8.817, 0.588 ], "P_xyz": [ 1.138, 9.279, 0.168 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.588, "theta": -138.760, "eta_prime": -177.169, "theta_prime": -139.738, "eta_base": -126.168, "theta_base": -114.385, "v0": -0.395, "v1": -22.376, "v2": 35.279, "v3": -36.446, "v4": 23.233, "amplitude": 37.345, "phase_angle": 19.148, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.455, "filter_rmsd": 0.065, "frame": { "rmsd": 0.007, "origin": [ 280.517, 153.589, 271.691 ], "x_axis": [ -0.246, -0.853, -0.461 ], "y_axis": [ -0.696, 0.486, -0.528 ], "z_axis": [ 0.675, 0.191, -0.713 ], "quaternion": [ 0.363, -0.495, 0.782, -0.108 ] } }, { "index": 413, "index_chain": 413, "chain_name": "a", "nt_resnum": 414, "nt_name": "U", "nt_code": "U", "nt_id": "///a/414", "linked_nts": [ "///a/413", "///a/415" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -68.146, "beta": 167.712, "gamma": 65.789, "delta": 77.763, "epsilon": -149.448, "zeta": -102.961, "epsilon_zeta": -46.487, "bb_type": "BI", "chi": -147.610, "glyco_bond": "anti", "C5prime_xyz": [ -1.894, 8.836, -0.254 ], "P_xyz": [ 0.511, 9.595, -0.900 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.626, "theta": -177.105, "eta_prime": -172.117, "theta_prime": 154.597, "eta_base": -130.840, "theta_base": 79.981, "v0": -3.286, "v1": -20.845, "v2": 35.711, "v3": -38.572, "v4": 26.380, "amplitude": 38.889, "phase_angle": 23.326, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.717, "filter_rmsd": 0.100, "frame": { "rmsd": 0.009, "origin": [ 283.049, 152.402, 269.270 ], "x_axis": [ -0.532, -0.478, -0.699 ], "y_axis": [ -0.315, 0.878, -0.360 ], "z_axis": [ 0.786, 0.029, -0.618 ], "quaternion": [ 0.427, -0.228, 0.870, -0.095 ] } }, { "index": 414, "index_chain": 414, "chain_name": "a", "nt_resnum": 415, "nt_name": "U", "nt_code": "U", "nt_id": "///a/415", "linked_nts": [ "///a/414", "///a/416" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn", "alpha": -155.213, "beta": 156.924, "gamma": 51.835, "delta": 143.694, "epsilon": -99.222, "zeta": -64.278, "epsilon_zeta": -34.944, "bb_type": "--", "chi": 48.186, "glyco_bond": "syn", "C5prime_xyz": [ -5.627, 4.262, 0.672 ], "P_xyz": [ -5.778, 1.744, -0.062 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 87.724, "theta": -48.940, "eta_prime": 99.396, "theta_prime": -60.145, "eta_base": 82.359, "theta_base": -35.306, "v0": -24.869, "v1": 37.628, "v2": -35.274, "v3": 21.937, "v4": 1.600, "amplitude": 37.840, "phase_angle": 158.776, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1z", "suiteness": 0.646, "filter_rmsd": 0.109, "frame": { "rmsd": 0.007, "origin": [ 284.487, 164.478, 270.529 ], "x_axis": [ 0.185, 0.535, 0.824 ], "y_axis": [ 0.950, -0.312, -0.011 ], "z_axis": [ 0.252, 0.785, -0.566 ], "quaternion": [ -0.277, 0.718, 0.517, 0.374 ] } }, { "index": 415, "index_chain": 415, "chain_name": "a", "nt_resnum": 416, "nt_name": "C", "nt_code": "C", "nt_id": "///a/416", "linked_nts": [ "///a/415", "///a/417" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -66.828, "beta": 171.363, "gamma": 69.504, "delta": 145.983, "epsilon": -149.580, "zeta": 136.332, "epsilon_zeta": 74.088, "bb_type": "--", "chi": -146.687, "glyco_bond": "anti", "C5prime_xyz": [ -1.977, 8.800, 0.180 ], "P_xyz": [ 0.376, 9.300, 1.224 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.897, "theta": 138.779, "eta_prime": -135.365, "theta_prime": 79.812, "eta_base": -125.974, "theta_base": 74.068, "v0": -23.082, "v1": 36.937, "v2": -35.939, "v3": 23.549, "v4": -0.519, "amplitude": 37.790, "phase_angle": 161.994, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "2[", "suiteness": 0.301, "filter_rmsd": 0.060, "frame": { "rmsd": 0.004, "origin": [ 282.823, 154.235, 264.769 ], "x_axis": [ -0.247, 0.830, -0.499 ], "y_axis": [ 0.856, 0.429, 0.290 ], "z_axis": [ 0.455, -0.356, -0.817 ], "quaternion": [ 0.302, 0.534, 0.789, -0.021 ] } }, { "index": 416, "index_chain": 416, "chain_name": "a", "nt_resnum": 417, "nt_name": "G", "nt_code": "G", "nt_id": "///a/417", "linked_nts": [ "///a/416", "///a/418" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-canonical,helix-end", "alpha": 43.929, "beta": -122.003, "gamma": -177.271, "delta": 81.371, "epsilon": -114.303, "zeta": -50.477, "epsilon_zeta": -63.826, "bb_type": "--", "chi": 46.024, "glyco_bond": "syn", "C5prime_xyz": [ -5.473, 3.849, 1.009 ], "P_xyz": [ -5.286, 3.238, 3.546 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 127.597, "theta": -123.844, "eta_prime": 116.419, "theta_prime": -116.526, "eta_base": 134.154, "theta_base": -137.090, "v0": -2.592, "v1": -19.659, "v2": 33.123, "v3": -35.558, "v4": 24.077, "amplitude": 35.895, "phase_angle": 22.665, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 285.454, 155.676, 270.347 ], "x_axis": [ -0.204, 0.979, -0.019 ], "y_axis": [ 0.886, 0.193, 0.421 ], "z_axis": [ 0.416, 0.069, -0.907 ], "quaternion": [ 0.143, 0.614, 0.759, 0.161 ] } }, { "index": 417, "index_chain": 417, "chain_name": "a", "nt_resnum": 418, "nt_name": "G", "nt_code": "G", "nt_id": "///a/418", "linked_nts": [ "///a/417", "///a/419" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -80.925, "beta": 138.095, "gamma": 122.169, "delta": 81.829, "epsilon": -147.958, "zeta": -73.601, "epsilon_zeta": -74.358, "bb_type": "BI", "chi": -168.153, "glyco_bond": "anti", "C5prime_xyz": [ -1.253, 8.606, 1.004 ], "P_xyz": [ 0.253, 9.819, -0.781 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -173.354, "theta": -162.863, "eta_prime": -133.290, "theta_prime": -164.646, "eta_base": -117.425, "theta_base": -131.902, "v0": 4.817, "v1": -26.598, "v2": 37.043, "v3": -35.234, "v4": 19.219, "amplitude": 37.792, "phase_angle": 11.424, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.008, "frame": { "rmsd": 0.008, "origin": [ 280.668, 154.465, 271.752 ], "x_axis": [ -0.304, -0.888, -0.344 ], "y_axis": [ 0.821, -0.428, 0.378 ], "z_axis": [ -0.483, -0.168, 0.859 ], "quaternion": [ 0.531, 0.257, -0.065, -0.805 ] } }, { "index": 418, "index_chain": 418, "chain_name": "a", "nt_resnum": 419, "nt_name": "A", "nt_code": "A", "nt_id": "///a/419", "linked_nts": [ "///a/418", "///a/420" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -68.110, "beta": 165.390, "gamma": 64.241, "delta": 81.298, "epsilon": -139.841, "zeta": -70.458, "epsilon_zeta": -69.383, "bb_type": "BI", "chi": -161.934, "glyco_bond": "anti", "C5prime_xyz": [ -1.191, 8.623, 0.628 ], "P_xyz": [ 1.402, 8.839, 0.267 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.007, "theta": -134.078, "eta_prime": -174.411, "theta_prime": -133.898, "eta_base": -126.361, "theta_base": -100.265, "v0": 5.272, "v1": -27.326, "v2": 37.852, "v3": -35.769, "v4": 19.309, "amplitude": 38.550, "phase_angle": 10.922, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.777, "filter_rmsd": 0.041, "frame": { "rmsd": 0.010, "origin": [ 278.000, 153.433, 273.465 ], "x_axis": [ 0.179, -0.983, 0.032 ], "y_axis": [ 0.763, 0.159, 0.626 ], "z_axis": [ -0.621, -0.088, 0.779 ], "quaternion": [ 0.727, 0.245, -0.224, -0.600 ] } }, { "index": 419, "index_chain": 419, "chain_name": "a", "nt_resnum": 420, "nt_name": "U", "nt_code": "U", "nt_id": "///a/420", "linked_nts": [ "///a/419", "///a/421" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -63.782, "beta": 166.441, "gamma": 59.038, "delta": 80.693, "epsilon": -145.771, "zeta": -82.312, "epsilon_zeta": -63.459, "bb_type": "BI", "chi": -159.631, "glyco_bond": "anti", "C5prime_xyz": [ -1.508, 8.757, 0.505 ], "P_xyz": [ 1.070, 9.211, 0.438 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.844, "theta": -150.924, "eta_prime": -173.793, "theta_prime": -151.025, "eta_base": -120.921, "theta_base": -137.199, "v0": 1.080, "v1": -23.458, "v2": 35.717, "v3": -36.069, "v4": 22.065, "amplitude": 37.348, "phase_angle": 16.994, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.909, "filter_rmsd": 0.103, "frame": { "rmsd": 0.009, "origin": [ 276.142, 150.844, 275.420 ], "x_axis": [ 0.725, -0.628, 0.283 ], "y_axis": [ 0.392, 0.715, 0.579 ], "z_axis": [ -0.566, -0.309, 0.764 ], "quaternion": [ 0.895, 0.248, -0.237, -0.285 ] } }, { "index": 420, "index_chain": 420, "chain_name": "a", "nt_resnum": 421, "nt_name": "U", "nt_code": "U", "nt_id": "///a/421", "linked_nts": [ "///a/420", "///a/422" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -63.409, "beta": 164.972, "gamma": 58.797, "delta": 83.322, "epsilon": -144.293, "zeta": 38.171, "epsilon_zeta": 177.536, "bb_type": "--", "chi": -148.881, "glyco_bond": "anti", "C5prime_xyz": [ -1.611, 8.810, -0.163 ], "P_xyz": [ 0.934, 9.301, -0.414 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.029, "theta": -21.237, "eta_prime": -178.097, "theta_prime": -63.266, "eta_base": -153.787, "theta_base": -86.726, "v0": -2.439, "v1": -19.382, "v2": 32.526, "v3": -34.861, "v4": 23.596, "amplitude": 35.212, "phase_angle": 22.525, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.861, "filter_rmsd": 0.105, "frame": { "rmsd": 0.008, "origin": [ 274.248, 149.048, 276.622 ], "x_axis": [ 0.884, -0.208, 0.418 ], "y_axis": [ -0.088, 0.805, 0.587 ], "z_axis": [ -0.459, -0.556, 0.693 ], "quaternion": [ 0.920, 0.311, -0.238, -0.033 ] } }, { "index": 421, "index_chain": 421, "chain_name": "a", "nt_resnum": 422, "nt_name": "G", "nt_code": "G", "nt_id": "///a/422", "linked_nts": [ "///a/421", "///a/423" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,helix,multiplet", "alpha": 150.101, "beta": 144.492, "gamma": 81.488, "delta": 148.674, "epsilon": -105.874, "zeta": 138.800, "epsilon_zeta": 115.326, "bb_type": "BII", "chi": -139.728, "glyco_bond": "anti", "C5prime_xyz": [ -2.203, 8.762, -0.169 ], "P_xyz": [ 0.375, 9.193, -0.203 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 62.680, "theta": 152.356, "eta_prime": 131.046, "theta_prime": 114.439, "eta_base": 145.481, "theta_base": 101.394, "v0": -24.856, "v1": 39.189, "v2": -37.631, "v3": 24.253, "v4": 0.182, "amplitude": 39.809, "phase_angle": 160.958, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "5z", "suiteness": 0.019, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 275.205, 147.570, 280.612 ], "x_axis": [ -0.446, -0.048, -0.894 ], "y_axis": [ -0.631, 0.725, 0.276 ], "z_axis": [ 0.635, 0.687, -0.354 ], "quaternion": [ 0.481, -0.214, 0.795, 0.303 ] } }, { "index": 422, "index_chain": 422, "chain_name": "a", "nt_resnum": 423, "nt_name": "U", "nt_code": "U", "nt_id": "///a/423", "linked_nts": [ "///a/422", "///a/424" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix,multiplet", "alpha": 28.744, "beta": -126.287, "gamma": -78.544, "delta": 144.151, "epsilon": -68.276, "zeta": 101.490, "epsilon_zeta": 190.234, "bb_type": "--", "chi": -103.362, "glyco_bond": "anti", "C5prime_xyz": [ -2.975, 8.111, -1.974 ], "P_xyz": [ -4.262, 9.629, -3.694 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -87.239, "theta": 102.495, "eta_prime": -118.519, "theta_prime": 78.810, "eta_base": -152.746, "theta_base": 40.487, "v0": -29.916, "v1": 41.640, "v2": -36.638, "v3": 20.398, "v4": 5.675, "amplitude": 41.029, "phase_angle": 153.251, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.098, "frame": { "rmsd": 0.011, "origin": [ 271.560, 142.929, 287.925 ], "x_axis": [ 0.816, -0.579, -0.010 ], "y_axis": [ 0.542, 0.759, 0.361 ], "z_axis": [ -0.202, -0.300, 0.932 ], "quaternion": [ 0.936, 0.176, -0.051, -0.299 ] } }, { "index": 423, "index_chain": 423, "chain_name": "a", "nt_resnum": 424, "nt_name": "A", "nt_code": "A", "nt_id": "///a/424", "linked_nts": [ "///a/423", "///a/425" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": 37.818, "beta": -172.979, "gamma": -175.804, "delta": 77.630, "epsilon": -140.734, "zeta": -79.370, "epsilon_zeta": -61.363, "bb_type": "BI", "chi": -153.738, "glyco_bond": "anti", "C5prime_xyz": [ -1.501, 8.800, 0.162 ], "P_xyz": [ -0.653, 10.591, -1.516 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 114.427, "theta": -145.085, "eta_prime": 89.482, "theta_prime": -146.548, "eta_base": 63.372, "theta_base": -112.161, "v0": -0.475, "v1": -23.192, "v2": 36.950, "v3": -38.183, "v4": 24.274, "amplitude": 39.141, "phase_angle": 19.262, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "6n", "suiteness": 0.278, "filter_rmsd": 0.039, "frame": { "rmsd": 0.009, "origin": [ 272.160, 146.468, 282.082 ], "x_axis": [ 0.717, -0.560, 0.415 ], "y_axis": [ -0.229, 0.373, 0.899 ], "z_axis": [ -0.659, -0.739, 0.139 ], "quaternion": [ 0.747, 0.549, -0.360, -0.111 ] } }, { "index": 424, "index_chain": 424, "chain_name": "a", "nt_resnum": 425, "nt_name": "A", "nt_code": "A", "nt_id": "///a/425", "linked_nts": [ "///a/424", "///a/426" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": 130.316, "beta": -152.262, "gamma": -157.233, "delta": 83.734, "epsilon": -113.353, "zeta": -63.697, "epsilon_zeta": -49.655, "bb_type": "--", "chi": 179.066, "glyco_bond": "anti", "C5prime_xyz": [ -1.128, 8.174, 1.780 ], "P_xyz": [ 0.261, 10.233, 1.052 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.535, "theta": -143.405, "eta_prime": -172.123, "theta_prime": -133.992, "eta_base": -120.135, "theta_base": -78.319, "v0": 7.327, "v1": -27.822, "v2": 36.799, "v3": -33.582, "v4": 16.574, "amplitude": 37.121, "phase_angle": 7.548, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.115, "filter_rmsd": 0.041, "frame": { "rmsd": 0.011, "origin": [ 272.870, 141.355, 284.210 ], "x_axis": [ 0.571, 0.087, 0.816 ], "y_axis": [ -0.633, 0.680, 0.371 ], "z_axis": [ -0.522, -0.728, 0.444 ], "quaternion": [ 0.821, 0.335, -0.408, 0.219 ] } }, { "index": 425, "index_chain": 425, "chain_name": "a", "nt_resnum": 426, "nt_name": "A", "nt_code": "A", "nt_id": "///a/426", "linked_nts": [ "///a/425", "///a/427" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -63.464, "beta": 157.358, "gamma": 60.935, "delta": 76.880, "epsilon": -129.310, "zeta": -60.972, "epsilon_zeta": -68.338, "bb_type": "BI", "chi": -168.969, "glyco_bond": "anti", "C5prime_xyz": [ -1.545, 8.665, 0.994 ], "P_xyz": [ 0.992, 9.246, 0.747 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.700, "theta": -120.995, "eta_prime": -174.486, "theta_prime": -118.140, "eta_base": -98.432, "theta_base": -67.889, "v0": 1.171, "v1": -25.357, "v2": 38.632, "v3": -38.992, "v4": 23.813, "amplitude": 40.390, "phase_angle": 16.968, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.343, "filter_rmsd": 0.036, "frame": { "rmsd": 0.010, "origin": [ 273.135, 140.177, 289.058 ], "x_axis": [ -0.216, 0.629, 0.747 ], "y_axis": [ -0.882, 0.203, -0.426 ], "z_axis": [ -0.419, -0.751, 0.510 ], "quaternion": [ 0.612, 0.133, -0.477, 0.617 ] } }, { "index": 426, "index_chain": 426, "chain_name": "a", "nt_resnum": 427, "nt_name": "G", "nt_code": "G", "nt_id": "///a/427", "linked_nts": [ "///a/426", "///a/428" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -67.127, "beta": 168.118, "gamma": 56.783, "delta": 79.533, "epsilon": -134.371, "zeta": -75.072, "epsilon_zeta": -59.299, "bb_type": "BI", "chi": -171.372, "glyco_bond": "anti", "C5prime_xyz": [ -1.330, 8.596, 1.161 ], "P_xyz": [ 1.267, 8.913, 1.333 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.998, "theta": -136.309, "eta_prime": -174.000, "theta_prime": -133.030, "eta_base": -98.808, "theta_base": -97.932, "v0": 3.138, "v1": -26.080, "v2": 37.942, "v3": -37.135, "v4": 21.422, "amplitude": 39.121, "phase_angle": 14.103, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.732, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 269.462, 141.297, 293.190 ], "x_axis": [ -0.765, 0.616, -0.189 ], "y_axis": [ -0.234, -0.539, -0.809 ], "z_axis": [ -0.600, -0.575, 0.556 ], "quaternion": [ 0.251, -0.233, -0.409, 0.846 ] } }, { "index": 427, "index_chain": 427, "chain_name": "a", "nt_resnum": 428, "nt_name": "C", "nt_code": "C", "nt_id": "///a/428", "linked_nts": [ "///a/427", "///a/429" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -61.813, "beta": 171.251, "gamma": 55.217, "delta": 80.339, "epsilon": -147.542, "zeta": -74.403, "epsilon_zeta": -73.139, "bb_type": "BI", "chi": -159.669, "glyco_bond": "anti", "C5prime_xyz": [ -1.393, 8.778, 0.513 ], "P_xyz": [ 1.178, 9.197, 0.601 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.285, "theta": -146.482, "eta_prime": -175.942, "theta_prime": -147.345, "eta_base": -124.692, "theta_base": -125.305, "v0": 1.553, "v1": -24.411, "v2": 36.703, "v3": -36.770, "v4": 22.179, "amplitude": 38.236, "phase_angle": 16.278, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.875, "filter_rmsd": 0.064, "frame": { "rmsd": 0.008, "origin": [ 266.015, 141.381, 295.260 ], "x_axis": [ -0.624, 0.183, -0.760 ], "y_axis": [ 0.252, -0.873, -0.418 ], "z_axis": [ -0.740, -0.452, 0.498 ], "quaternion": [ -0.020, -0.433, -0.251, 0.865 ] } }, { "index": 428, "index_chain": 428, "chain_name": "a", "nt_resnum": 429, "nt_name": "A", "nt_code": "A", "nt_id": "///a/429", "linked_nts": [ "///a/428", "///a/430" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -68.888, "beta": 167.681, "gamma": 59.893, "delta": 77.566, "epsilon": -161.535, "zeta": -90.379, "epsilon_zeta": -71.156, "bb_type": "BI", "chi": -165.104, "glyco_bond": "anti", "C5prime_xyz": [ -1.497, 8.664, 0.787 ], "P_xyz": [ 1.043, 9.253, 0.632 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.137, "theta": -135.231, "eta_prime": 176.765, "theta_prime": -139.544, "eta_base": -143.431, "theta_base": -113.447, "v0": 2.535, "v1": -26.335, "v2": 38.811, "v3": -38.372, "v4": 22.595, "amplitude": 40.188, "phase_angle": 15.041, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.895, "filter_rmsd": 0.036, "frame": { "rmsd": 0.011, "origin": [ 262.767, 141.141, 296.899 ], "x_axis": [ -0.324, -0.209, -0.923 ], "y_axis": [ 0.475, -0.879, 0.033 ], "z_axis": [ -0.818, -0.428, 0.384 ], "quaternion": [ -0.213, -0.541, -0.123, 0.804 ] } }, { "index": 429, "index_chain": 429, "chain_name": "a", "nt_resnum": 430, "nt_name": "C", "nt_code": "C", "nt_id": "///a/430", "linked_nts": [ "///a/429", "///a/431" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 163.197, "beta": -137.507, "gamma": 170.155, "delta": 81.374, "epsilon": -143.892, "zeta": -71.303, "epsilon_zeta": -72.590, "bb_type": "BI", "chi": -155.003, "glyco_bond": "anti", "C5prime_xyz": [ -1.444, 8.815, 0.218 ], "P_xyz": [ 0.032, 9.537, -1.805 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.384, "theta": -153.739, "eta_prime": -169.757, "theta_prime": -156.635, "eta_base": -126.707, "theta_base": -126.297, "v0": 0.695, "v1": -23.077, "v2": 35.375, "v3": -35.922, "v4": 22.250, "amplitude": 37.099, "phase_angle": 17.535, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.447, "filter_rmsd": 0.066, "frame": { "rmsd": 0.008, "origin": [ 259.607, 141.360, 296.122 ], "x_axis": [ -0.275, -0.654, -0.704 ], "y_axis": [ 0.185, -0.755, 0.629 ], "z_axis": [ -0.944, 0.043, 0.328 ], "quaternion": [ -0.273, -0.537, 0.219, 0.768 ] } }, { "index": 430, "index_chain": 430, "chain_name": "a", "nt_resnum": 431, "nt_name": "U", "nt_code": "U", "nt_id": "///a/431", "linked_nts": [ "///a/430", "///a/432" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -69.697, "beta": 176.302, "gamma": 53.576, "delta": 82.029, "epsilon": -144.110, "zeta": -74.403, "epsilon_zeta": -69.707, "bb_type": "BI", "chi": -156.091, "glyco_bond": "anti", "C5prime_xyz": [ -1.503, 8.743, 0.309 ], "P_xyz": [ 1.052, 9.257, 0.489 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.554, "theta": -143.648, "eta_prime": -179.968, "theta_prime": -136.094, "eta_base": -136.025, "theta_base": -121.467, "v0": 1.626, "v1": -23.747, "v2": 35.594, "v3": -35.580, "v4": 21.470, "amplitude": 37.052, "phase_angle": 16.128, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.973, "filter_rmsd": 0.107, "frame": { "rmsd": 0.011, "origin": [ 255.621, 140.533, 295.733 ], "x_axis": [ 0.237, -0.932, -0.273 ], "y_axis": [ 0.257, -0.211, 0.943 ], "z_axis": [ -0.937, -0.294, 0.189 ], "quaternion": [ 0.551, 0.561, -0.301, -0.539 ] } }, { "index": 431, "index_chain": 431, "chain_name": "a", "nt_resnum": 432, "nt_name": "U", "nt_code": "U", "nt_id": "///a/432", "linked_nts": [ "///a/431", "///a/433" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -62.600, "beta": -177.297, "gamma": 61.282, "delta": 139.586, "epsilon": -138.085, "zeta": 145.247, "epsilon_zeta": 76.668, "bb_type": "--", "chi": -141.986, "glyco_bond": "anti", "C5prime_xyz": [ -1.929, 8.785, -0.212 ], "P_xyz": [ 0.251, 9.632, 0.942 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -174.945, "theta": 120.885, "eta_prime": -150.681, "theta_prime": 107.459, "eta_base": -131.770, "theta_base": 111.424, "v0": -25.267, "v1": 35.762, "v2": -32.135, "v3": 18.395, "v4": 4.127, "amplitude": 35.545, "phase_angle": 154.695, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.901, "filter_rmsd": 0.098, "frame": { "rmsd": 0.010, "origin": [ 251.707, 138.534, 295.006 ], "x_axis": [ 0.846, -0.534, 0.019 ], "y_axis": [ 0.151, 0.273, 0.950 ], "z_axis": [ -0.512, -0.800, 0.312 ], "quaternion": [ 0.779, 0.561, -0.170, -0.220 ] } }, { "index": 432, "index_chain": 432, "chain_name": "a", "nt_resnum": 433, "nt_name": "U", "nt_code": "U", "nt_id": "///a/433", "linked_nts": [ "///a/432", "///a/434" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end,multiplet", "alpha": -92.078, "beta": 154.530, "gamma": 39.020, "delta": 79.113, "epsilon": -141.873, "zeta": -59.069, "epsilon_zeta": -82.804, "bb_type": "BI", "chi": -156.421, "glyco_bond": "anti", "C5prime_xyz": [ -1.717, 8.826, 0.278 ], "P_xyz": [ 0.820, 9.404, 0.436 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.794, "theta": -125.087, "eta_prime": 148.568, "theta_prime": -122.127, "eta_base": 144.097, "theta_base": -73.146, "v0": -2.372, "v1": -21.319, "v2": 35.506, "v3": -37.829, "v4": 25.373, "amplitude": 38.307, "phase_angle": 22.047, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.549, "filter_rmsd": 0.105, "frame": { "rmsd": 0.012, "origin": [ 249.195, 148.836, 296.029 ], "x_axis": [ 0.220, -0.782, -0.583 ], "y_axis": [ -0.228, -0.623, 0.749 ], "z_axis": [ -0.948, -0.032, -0.316 ], "quaternion": [ 0.265, 0.735, -0.344, -0.521 ] } }, { "index": 433, "index_chain": 433, "chain_name": "a", "nt_resnum": 434, "nt_name": "A", "nt_code": "A", "nt_id": "///a/434", "linked_nts": [ "///a/433", "///a/435" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,multiplet", "alpha": -78.598, "beta": 179.750, "gamma": 57.104, "delta": 81.120, "epsilon": -132.045, "zeta": -68.307, "epsilon_zeta": -63.737, "bb_type": "BI", "chi": -164.510, "glyco_bond": "anti", "C5prime_xyz": [ -1.138, 8.568, 0.806 ], "P_xyz": [ 1.468, 8.734, 1.038 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.552, "theta": -126.972, "eta_prime": -177.107, "theta_prime": -124.035, "eta_base": -110.239, "theta_base": -83.731, "v0": 5.257, "v1": -27.396, "v2": 38.088, "v3": -35.963, "v4": 19.371, "amplitude": 38.794, "phase_angle": 10.951, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.764, "filter_rmsd": 0.041, "frame": { "rmsd": 0.013, "origin": [ 246.426, 144.237, 294.084 ], "x_axis": [ 0.270, -0.820, 0.505 ], "y_axis": [ -0.354, 0.403, 0.844 ], "z_axis": [ -0.895, -0.407, -0.182 ], "quaternion": [ 0.611, 0.512, -0.573, -0.191 ] } }, { "index": 434, "index_chain": 434, "chain_name": "a", "nt_resnum": 435, "nt_name": "A", "nt_code": "A", "nt_id": "///a/435", "linked_nts": [ "///a/434", "///a/436" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -63.006, "beta": 168.692, "gamma": 52.828, "delta": 76.216, "epsilon": -133.121, "zeta": -60.525, "epsilon_zeta": -72.596, "bb_type": "BI", "chi": 178.953, "glyco_bond": "anti", "C5prime_xyz": [ -1.309, 8.340, 1.725 ], "P_xyz": [ 1.252, 8.543, 2.228 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.284, "theta": -125.043, "eta_prime": -178.952, "theta_prime": -122.220, "eta_base": -116.152, "theta_base": -87.410, "v0": 5.896, "v1": -29.662, "v2": 41.092, "v3": -38.678, "v4": 20.653, "amplitude": 41.811, "phase_angle": 10.646, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.810, "filter_rmsd": 0.042, "frame": { "rmsd": 0.013, "origin": [ 243.819, 140.055, 295.492 ], "x_axis": [ 0.230, -0.031, 0.973 ], "y_axis": [ -0.336, 0.936, 0.109 ], "z_axis": [ -0.913, -0.352, 0.205 ], "quaternion": [ 0.770, 0.150, -0.612, 0.099 ] } }, { "index": 435, "index_chain": 435, "chain_name": "a", "nt_resnum": 436, "nt_name": "G", "nt_code": "G", "nt_id": "///a/436", "linked_nts": [ "///a/435", "///a/437" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -69.733, "beta": -177.715, "gamma": 59.060, "delta": 76.976, "epsilon": -142.677, "zeta": -64.684, "epsilon_zeta": -77.993, "bb_type": "BI", "chi": -168.680, "glyco_bond": "anti", "C5prime_xyz": [ -1.692, 8.792, 0.972 ], "P_xyz": [ 0.751, 9.562, 1.525 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.013, "theta": -137.854, "eta_prime": -172.768, "theta_prime": -134.859, "eta_base": -117.829, "theta_base": -95.704, "v0": -1.607, "v1": -22.671, "v2": 36.933, "v3": -38.853, "v4": 25.488, "amplitude": 39.520, "phase_angle": 20.843, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.747, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 242.205, 137.519, 299.109 ], "x_axis": [ 0.050, 0.685, 0.726 ], "y_axis": [ -0.427, 0.672, -0.605 ], "z_axis": [ -0.903, -0.280, 0.326 ], "quaternion": [ 0.715, -0.113, -0.569, 0.389 ] } }, { "index": 436, "index_chain": 436, "chain_name": "a", "nt_resnum": 437, "nt_name": "U", "nt_code": "U", "nt_id": "///a/437", "linked_nts": [ "///a/436", "///a/438" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -71.038, "beta": 176.312, "gamma": 56.201, "delta": 77.670, "epsilon": -148.882, "zeta": -75.408, "epsilon_zeta": -73.474, "bb_type": "BI", "chi": -154.549, "glyco_bond": "anti", "C5prime_xyz": [ -1.777, 8.843, 0.161 ], "P_xyz": [ 0.697, 9.696, 0.149 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.496, "theta": -151.250, "eta_prime": -179.865, "theta_prime": -150.200, "eta_base": -125.851, "theta_base": -127.266, "v0": -2.822, "v1": -21.025, "v2": 35.547, "v3": -38.138, "v4": 25.804, "amplitude": 38.528, "phase_angle": 22.689, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.887, "filter_rmsd": 0.101, "frame": { "rmsd": 0.005, "origin": [ 240.268, 137.688, 302.267 ], "x_axis": [ -0.134, 0.983, 0.124 ], "y_axis": [ -0.521, 0.037, -0.853 ], "z_axis": [ -0.843, -0.179, 0.507 ], "quaternion": [ 0.594, -0.284, -0.407, 0.633 ] } }, { "index": 437, "index_chain": 437, "chain_name": "a", "nt_resnum": 438, "nt_name": "U", "nt_code": "U", "nt_id": "///a/438", "linked_nts": [ "///a/437", "///a/439" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -65.833, "beta": 176.593, "gamma": 49.946, "delta": 78.634, "epsilon": -154.223, "zeta": -75.632, "epsilon_zeta": -78.591, "bb_type": "BI", "chi": -163.448, "glyco_bond": "anti", "C5prime_xyz": [ -1.638, 8.797, 0.677 ], "P_xyz": [ 0.829, 9.524, 1.151 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.356, "theta": -155.509, "eta_prime": 173.363, "theta_prime": -154.408, "eta_base": -151.996, "theta_base": -127.630, "v0": -1.785, "v1": -22.053, "v2": 36.113, "v3": -38.077, "v4": 25.069, "amplitude": 38.707, "phase_angle": 21.096, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.932, "filter_rmsd": 0.100, "frame": { "rmsd": 0.008, "origin": [ 237.599, 138.057, 305.411 ], "x_axis": [ 0.014, 0.864, -0.503 ], "y_axis": [ -0.360, -0.465, -0.809 ], "z_axis": [ -0.933, 0.192, 0.304 ], "quaternion": [ 0.462, -0.542, -0.233, 0.662 ] } }, { "index": 438, "index_chain": 438, "chain_name": "a", "nt_resnum": 439, "nt_name": "G", "nt_code": "G", "nt_id": "///a/439", "linked_nts": [ "///a/438", "///a/440" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -70.580, "beta": 164.489, "gamma": 66.594, "delta": 79.088, "epsilon": -146.937, "zeta": -67.339, "epsilon_zeta": -79.598, "bb_type": "BI", "chi": -172.825, "glyco_bond": "anti", "C5prime_xyz": [ -1.464, 8.630, 1.245 ], "P_xyz": [ 1.108, 9.125, 1.164 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.607, "theta": -139.952, "eta_prime": -179.977, "theta_prime": -140.634, "eta_base": -139.234, "theta_base": -115.575, "v0": 2.677, "v1": -25.893, "v2": 37.973, "v3": -37.414, "v4": 21.896, "amplitude": 39.265, "phase_angle": 14.736, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.671, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 235.015, 139.880, 307.437 ], "x_axis": [ -0.136, 0.507, -0.851 ], "y_axis": [ -0.315, -0.837, -0.448 ], "z_axis": [ -0.939, 0.207, 0.273 ], "quaternion": [ 0.274, -0.598, -0.080, 0.749 ] } }, { "index": 439, "index_chain": 439, "chain_name": "a", "nt_resnum": 440, "nt_name": "G", "nt_code": "G", "nt_id": "///a/440", "linked_nts": [ "///a/439", "///a/441" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -73.262, "beta": 164.312, "gamma": 77.504, "delta": 81.827, "epsilon": -146.600, "zeta": -57.633, "epsilon_zeta": -88.967, "bb_type": "BI", "chi": -173.559, "glyco_bond": "anti", "C5prime_xyz": [ -1.849, 8.725, 1.232 ], "P_xyz": [ 0.652, 9.509, 1.228 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.915, "theta": -128.630, "eta_prime": -166.240, "theta_prime": -128.288, "eta_base": -121.987, "theta_base": -74.662, "v0": -4.266, "v1": -18.177, "v2": 32.249, "v3": -35.546, "v4": 25.137, "amplitude": 35.651, "phase_angle": 25.232, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.219, "filter_rmsd": 0.008, "frame": { "rmsd": 0.008, "origin": [ 232.531, 142.833, 307.849 ], "x_axis": [ -0.300, -0.023, -0.954 ], "y_axis": [ -0.228, -0.969, 0.095 ], "z_axis": [ -0.926, 0.246, 0.285 ], "quaternion": [ 0.064, -0.588, 0.107, 0.799 ] } }, { "index": 440, "index_chain": 440, "chain_name": "a", "nt_resnum": 441, "nt_name": "G", "nt_code": "G", "nt_id": "///a/441", "linked_nts": [ "///a/440", "///a/442" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -80.355, "beta": 172.567, "gamma": 66.569, "delta": 79.844, "epsilon": -137.196, "zeta": -83.527, "epsilon_zeta": -53.669, "bb_type": "BI", "chi": -147.169, "glyco_bond": "anti", "C5prime_xyz": [ -1.386, 8.737, -0.261 ], "P_xyz": [ 1.129, 9.033, -0.967 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.311, "theta": 179.883, "eta_prime": -171.744, "theta_prime": 163.759, "eta_base": -97.152, "theta_base": 152.228, "v0": 3.278, "v1": -25.878, "v2": 37.479, "v3": -36.520, "v4": 20.928, "amplitude": 38.590, "phase_angle": 13.781, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.568, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 228.209, 142.723, 305.932 ], "x_axis": [ -0.604, -0.719, -0.345 ], "y_axis": [ -0.023, -0.416, 0.909 ], "z_axis": [ -0.797, 0.557, 0.235 ], "quaternion": [ -0.232, -0.380, 0.488, 0.751 ] } }, { "index": 441, "index_chain": 441, "chain_name": "a", "nt_resnum": 442, "nt_name": "A", "nt_code": "A", "nt_id": "///a/442", "linked_nts": [ "///a/441", "///a/443" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -115.646, "beta": 77.573, "gamma": 164.590, "delta": 79.017, "epsilon": 162.538, "zeta": 30.772, "epsilon_zeta": 131.766, "bb_type": "--", "chi": -175.977, "glyco_bond": "anti", "C5prime_xyz": [ -1.296, 8.408, 1.449 ], "P_xyz": [ -1.717, 10.332, -0.292 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -139.571, "theta": -168.129, "eta_prime": -178.305, "theta_prime": -139.745, "eta_base": 162.268, "theta_base": -67.355, "v0": 4.995, "v1": -26.881, "v2": 37.153, "v3": -35.437, "v4": 19.323, "amplitude": 37.890, "phase_angle": 11.317, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.648, "filter_rmsd": 0.038, "frame": { "rmsd": 0.012, "origin": [ 228.618, 152.395, 311.397 ], "x_axis": [ -0.377, -0.055, -0.925 ], "y_axis": [ -0.337, -0.922, 0.192 ], "z_axis": [ -0.863, 0.384, 0.329 ], "quaternion": [ 0.087, -0.551, 0.178, 0.811 ] } }, { "index": 442, "index_chain": 442, "chain_name": "a", "nt_resnum": 443, "nt_name": "G", "nt_code": "G", "nt_id": "///a/443", "linked_nts": [ "///a/442", "///a/444" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -143.981, "beta": 175.027, "gamma": 64.989, "delta": 80.071, "epsilon": -148.174, "zeta": -75.097, "epsilon_zeta": -73.077, "bb_type": "BI", "chi": -150.336, "glyco_bond": "anti", "C5prime_xyz": [ -1.249, 8.802, -0.058 ], "P_xyz": [ 1.284, 9.214, -0.488 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 131.281, "theta": -149.534, "eta_prime": 173.910, "theta_prime": -151.643, "eta_base": -90.747, "theta_base": -144.306, "v0": 2.031, "v1": -24.750, "v2": 36.744, "v3": -36.506, "v4": 21.790, "amplitude": 38.144, "phase_angle": 15.573, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 223.769, 150.111, 308.731 ], "x_axis": [ -0.383, -0.923, 0.041 ], "y_axis": [ 0.097, 0.004, 0.995 ], "z_axis": [ -0.919, 0.385, 0.088 ], "quaternion": [ -0.421, -0.362, 0.570, 0.606 ] } }, { "index": 443, "index_chain": 443, "chain_name": "a", "nt_resnum": 444, "nt_name": "G", "nt_code": "G", "nt_id": "///a/444", "linked_nts": [ "///a/443", "///a/445" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end", "alpha": -70.323, "beta": 163.971, "gamma": 64.349, "delta": 79.961, "epsilon": -155.444, "zeta": 75.808, "epsilon_zeta": 128.748, "bb_type": "--", "chi": -158.900, "glyco_bond": "anti", "C5prime_xyz": [ -1.824, 8.871, 0.405 ], "P_xyz": [ 0.654, 9.651, 0.183 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.395, "theta": -0.428, "eta_prime": 178.681, "theta_prime": -47.591, "eta_base": -160.004, "theta_base": -107.984, "v0": -4.340, "v1": -18.898, "v2": 33.437, "v3": -36.942, "v4": 26.124, "amplitude": 36.965, "phase_angle": 25.238, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.762, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 220.859, 151.193, 307.567 ], "x_axis": [ -0.039, -0.940, 0.338 ], "y_axis": [ 0.098, 0.333, 0.938 ], "z_axis": [ -0.994, 0.070, 0.079 ], "quaternion": [ 0.586, 0.370, -0.568, -0.443 ] } }, { "index": 444, "index_chain": 444, "chain_name": "a", "nt_resnum": 445, "nt_name": "A", "nt_code": "A", "nt_id": "///a/445", "linked_nts": [ "///a/444", "///a/446" ], "nt_type": "RNA", "dbn": ".", "summary": "syn", "alpha": -175.623, "beta": 176.612, "gamma": -19.512, "delta": 155.060, "epsilon": -68.855, "zeta": 98.665, "epsilon_zeta": 192.479, "bb_type": "--", "chi": 47.561, "glyco_bond": "syn", "C5prime_xyz": [ -5.433, 3.627, 0.478 ], "P_xyz": [ -6.960, 2.029, -0.902 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 51.933, "theta": 106.077, "eta_prime": 107.020, "theta_prime": 79.965, "eta_base": 123.251, "theta_base": 99.280, "v0": -22.532, "v1": 39.287, "v2": -39.964, "v3": 28.020, "v4": -3.621, "amplitude": 41.149, "phase_angle": 166.214, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.045, "frame": { "rmsd": 0.028, "origin": [ 213.815, 151.361, 310.951 ], "x_axis": [ -0.371, -0.921, -0.120 ], "y_axis": [ 0.103, -0.169, 0.980 ], "z_axis": [ -0.923, 0.351, 0.158 ], "quaternion": [ -0.393, -0.400, 0.511, 0.652 ] } }, { "index": 445, "index_chain": 445, "chain_name": "a", "nt_resnum": 446, "nt_name": "A", "nt_code": "A", "nt_id": "///a/446", "linked_nts": [ "///a/445", "///a/447" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": 179.874, "beta": 130.366, "gamma": 98.601, "delta": 83.582, "epsilon": -140.410, "zeta": -38.179, "epsilon_zeta": -102.231, "bb_type": "BI", "chi": -130.333, "glyco_bond": "anti", "C5prime_xyz": [ -1.536, 8.359, -1.250 ], "P_xyz": [ -0.416, 7.800, -3.558 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 120.841, "theta": -115.725, "eta_prime": 121.830, "theta_prime": -125.438, "eta_base": 162.354, "theta_base": -112.385, "v0": 7.488, "v1": -28.074, "v2": 36.906, "v3": -33.486, "v4": 16.469, "amplitude": 37.201, "phase_angle": 7.222, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.029, "origin": [ 210.549, 154.050, 313.661 ], "x_axis": [ 0.022, -0.992, 0.127 ], "y_axis": [ 0.371, 0.126, 0.920 ], "z_axis": [ -0.928, 0.027, 0.371 ], "quaternion": [ 0.616, 0.362, -0.428, -0.553 ] } }, { "index": 446, "index_chain": 446, "chain_name": "a", "nt_resnum": 447, "nt_name": "G", "nt_code": "G", "nt_id": "///a/447", "linked_nts": [ "///a/446", "///a/448" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -109.352, "beta": 140.040, "gamma": 136.563, "delta": 82.749, "epsilon": -134.727, "zeta": -65.128, "epsilon_zeta": -69.599, "bb_type": "BI", "chi": -174.936, "glyco_bond": "anti", "C5prime_xyz": [ -1.035, 8.416, 1.397 ], "P_xyz": [ 0.378, 10.047, -0.106 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -171.396, "theta": -154.355, "eta_prime": -143.921, "theta_prime": -151.542, "eta_base": -100.389, "theta_base": -111.734, "v0": 6.061, "v1": -27.714, "v2": 37.586, "v3": -35.072, "v4": 18.346, "amplitude": 38.124, "phase_angle": 9.637, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 207.600, 148.896, 317.452 ], "x_axis": [ 0.405, -0.587, 0.701 ], "y_axis": [ 0.307, 0.809, 0.501 ], "z_axis": [ -0.861, 0.012, 0.509 ], "quaternion": [ 0.825, 0.148, -0.473, -0.271 ] } }, { "index": 447, "index_chain": 447, "chain_name": "a", "nt_resnum": 448, "nt_name": "G", "nt_code": "G", "nt_id": "///a/448", "linked_nts": [ "///a/447", "///a/449" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -76.113, "beta": 171.260, "gamma": 62.432, "delta": 78.284, "epsilon": -140.903, "zeta": -74.885, "epsilon_zeta": -66.018, "bb_type": "BI", "chi": -175.703, "glyco_bond": "anti", "C5prime_xyz": [ -1.440, 8.556, 1.394 ], "P_xyz": [ 1.124, 9.023, 1.577 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.271, "theta": -142.405, "eta_prime": -179.636, "theta_prime": -141.295, "eta_base": -119.703, "theta_base": -118.641, "v0": 3.131, "v1": -26.976, "v2": 39.352, "v3": -38.445, "v4": 22.295, "amplitude": 40.591, "phase_angle": 14.194, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.739, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 205.448, 146.794, 320.522 ], "x_axis": [ 0.614, 0.146, 0.776 ], "y_axis": [ -0.059, 0.988, -0.139 ], "z_axis": [ -0.787, 0.040, 0.615 ], "quaternion": [ 0.897, -0.050, -0.436, 0.057 ] } }, { "index": 448, "index_chain": 448, "chain_name": "a", "nt_resnum": 449, "nt_name": "G", "nt_code": "G", "nt_id": "///a/449", "linked_nts": [ "///a/448", "///a/450" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -57.616, "beta": 166.261, "gamma": 60.047, "delta": 75.272, "epsilon": -130.084, "zeta": -75.463, "epsilon_zeta": -54.621, "bb_type": "BI", "chi": -168.148, "glyco_bond": "anti", "C5prime_xyz": [ -1.738, 8.822, 0.948 ], "P_xyz": [ 0.759, 9.581, 1.100 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.280, "theta": -136.855, "eta_prime": -171.710, "theta_prime": -134.170, "eta_base": -134.691, "theta_base": -86.609, "v0": -2.192, "v1": -22.615, "v2": 37.583, "v3": -39.856, "v4": 26.452, "amplitude": 40.432, "phase_angle": 21.637, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.813, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 204.096, 144.896, 323.633 ], "x_axis": [ 0.503, 0.635, 0.586 ], "y_axis": [ -0.427, 0.772, -0.471 ], "z_axis": [ -0.751, -0.013, 0.660 ], "quaternion": [ 0.857, -0.134, -0.390, 0.310 ] } }, { "index": 449, "index_chain": 449, "chain_name": "a", "nt_resnum": 450, "nt_name": "C", "nt_code": "C", "nt_id": "///a/450", "linked_nts": [ "///a/449", "///a/451" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -55.656, "beta": 160.514, "gamma": 51.550, "delta": 75.380, "epsilon": -139.843, "zeta": -78.282, "epsilon_zeta": -61.561, "bb_type": "BI", "chi": -159.320, "glyco_bond": "anti", "C5prime_xyz": [ -1.544, 8.876, 0.461 ], "P_xyz": [ 0.992, 9.467, 0.316 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.457, "theta": -146.956, "eta_prime": 178.946, "theta_prime": -146.934, "eta_base": -116.323, "theta_base": -122.499, "v0": -1.310, "v1": -23.493, "v2": 38.105, "v3": -39.810, "v4": 25.929, "amplitude": 40.648, "phase_angle": 20.375, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.670, "filter_rmsd": 0.067, "frame": { "rmsd": 0.009, "origin": [ 203.639, 146.499, 327.081 ], "x_axis": [ 0.150, 0.988, -0.020 ], "y_axis": [ -0.784, 0.107, -0.611 ], "z_axis": [ -0.602, 0.107, 0.791 ], "quaternion": [ 0.716, -0.251, -0.203, 0.619 ] } }, { "index": 450, "index_chain": 450, "chain_name": "a", "nt_resnum": 451, "nt_name": "A", "nt_code": "A", "nt_id": "///a/451", "linked_nts": [ "///a/450", "///a/452" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -59.164, "beta": 162.513, "gamma": 54.457, "delta": 75.846, "epsilon": -146.650, "zeta": -78.818, "epsilon_zeta": -67.831, "bb_type": "BI", "chi": -171.887, "glyco_bond": "anti", "C5prime_xyz": [ -1.798, 8.659, 1.181 ], "P_xyz": [ 0.686, 9.411, 1.391 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.210, "theta": -151.965, "eta_prime": 176.026, "theta_prime": -150.074, "eta_base": -143.770, "theta_base": -114.571, "v0": -0.942, "v1": -23.870, "v2": 38.266, "v3": -39.773, "v4": 25.665, "amplitude": 40.683, "phase_angle": 19.847, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.793, "filter_rmsd": 0.040, "frame": { "rmsd": 0.011, "origin": [ 202.798, 148.060, 330.480 ], "x_axis": [ -0.042, 0.823, -0.566 ], "y_axis": [ -0.751, -0.400, -0.526 ], "z_axis": [ -0.659, 0.403, 0.635 ], "quaternion": [ 0.546, -0.425, -0.043, 0.721 ] } }, { "index": 451, "index_chain": 451, "chain_name": "a", "nt_resnum": 452, "nt_name": "G", "nt_code": "G", "nt_id": "///a/452", "linked_nts": [ "///a/451", "///a/453" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -57.014, "beta": 164.306, "gamma": 55.753, "delta": 79.478, "epsilon": -140.298, "zeta": -85.594, "epsilon_zeta": -54.704, "bb_type": "BI", "chi": -174.205, "glyco_bond": "anti", "C5prime_xyz": [ -1.343, 8.581, 1.330 ], "P_xyz": [ 1.238, 8.843, 1.634 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.087, "theta": -147.966, "eta_prime": -175.626, "theta_prime": -145.913, "eta_base": -126.173, "theta_base": -122.650, "v0": 2.204, "v1": -24.880, "v2": 36.934, "v3": -36.585, "v4": 21.723, "amplitude": 38.302, "phase_angle": 15.360, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.839, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 201.575, 151.103, 332.473 ], "x_axis": [ -0.460, 0.363, -0.810 ], "y_axis": [ -0.544, -0.837, -0.066 ], "z_axis": [ -0.702, 0.410, 0.583 ], "quaternion": [ 0.267, -0.445, 0.101, 0.848 ] } }, { "index": 452, "index_chain": 452, "chain_name": "a", "nt_resnum": 453, "nt_name": "U", "nt_code": "U", "nt_id": "///a/453", "linked_nts": [ "///a/452", "///a/454" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -48.054, "beta": 159.084, "gamma": 49.934, "delta": 78.673, "epsilon": -147.872, "zeta": -92.344, "epsilon_zeta": -55.528, "bb_type": "BI", "chi": -164.579, "glyco_bond": "anti", "C5prime_xyz": [ -1.448, 8.700, 0.804 ], "P_xyz": [ 1.140, 9.035, 0.875 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.687, "theta": -158.533, "eta_prime": -176.577, "theta_prime": -159.326, "eta_base": -138.203, "theta_base": -148.728, "v0": 2.128, "v1": -25.347, "v2": 37.756, "v3": -37.471, "v4": 22.250, "amplitude": 39.182, "phase_angle": 15.509, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.634, "filter_rmsd": 0.106, "frame": { "rmsd": 0.010, "origin": [ 200.146, 153.905, 333.897 ], "x_axis": [ -0.702, -0.092, -0.707 ], "y_axis": [ -0.293, -0.867, 0.403 ], "z_axis": [ -0.650, 0.490, 0.582 ], "quaternion": [ 0.057, -0.382, 0.251, 0.887 ] } }, { "index": 453, "index_chain": 453, "chain_name": "a", "nt_resnum": 454, "nt_name": "A", "nt_code": "A", "nt_id": "///a/454", "linked_nts": [ "///a/453", "///a/455" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -43.509, "beta": 158.774, "gamma": 43.784, "delta": 77.506, "epsilon": -164.607, "zeta": -98.070, "epsilon_zeta": -66.537, "bb_type": "BI", "chi": -166.627, "glyco_bond": "anti", "C5prime_xyz": [ -1.423, 8.633, 0.905 ], "P_xyz": [ 1.162, 8.983, 1.101 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.262, "theta": -139.538, "eta_prime": 176.503, "theta_prime": -142.670, "eta_base": -158.943, "theta_base": -111.820, "v0": 2.912, "v1": -26.598, "v2": 38.964, "v3": -38.327, "v4": 22.278, "amplitude": 40.252, "phase_angle": 14.537, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.413, "filter_rmsd": 0.038, "frame": { "rmsd": 0.012, "origin": [ 199.129, 157.166, 335.513 ], "x_axis": [ -0.703, -0.443, -0.557 ], "y_axis": [ -0.042, -0.756, 0.654 ], "z_axis": [ -0.710, 0.483, 0.512 ], "quaternion": [ -0.116, -0.368, 0.330, 0.862 ] } }, { "index": 454, "index_chain": 454, "chain_name": "a", "nt_resnum": 455, "nt_name": "A", "nt_code": "A", "nt_id": "///a/455", "linked_nts": [ "///a/454", "///a/456" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 162.093, "beta": -128.205, "gamma": 161.235, "delta": 82.664, "epsilon": -142.725, "zeta": -64.520, "epsilon_zeta": -78.204, "bb_type": "BI", "chi": 171.168, "glyco_bond": "anti", "C5prime_xyz": [ -1.407, 8.124, 2.147 ], "P_xyz": [ 0.913, 8.915, 1.250 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.859, "theta": -125.607, "eta_prime": -176.171, "theta_prime": -126.083, "eta_base": -123.622, "theta_base": -110.195, "v0": 3.542, "v1": -24.816, "v2": 35.469, "v3": -34.434, "v4": 19.459, "amplitude": 36.426, "phase_angle": 13.166, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.132, "filter_rmsd": 0.046, "frame": { "rmsd": 0.018, "origin": [ 195.907, 159.064, 335.392 ], "x_axis": [ -0.532, -0.841, -0.099 ], "y_axis": [ 0.364, -0.333, 0.870 ], "z_axis": [ -0.764, 0.427, 0.484 ], "quaternion": [ -0.393, -0.282, 0.423, 0.766 ] } }, { "index": 455, "index_chain": 455, "chain_name": "a", "nt_resnum": 456, "nt_name": "G", "nt_code": "G", "nt_id": "///a/456", "linked_nts": [ "///a/455", "///a/457" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -112.163, "beta": -142.925, "gamma": 78.753, "delta": 149.257, "epsilon": -163.540, "zeta": -104.058, "epsilon_zeta": -59.482, "bb_type": "BI", "chi": -127.847, "glyco_bond": "anti", "C5prime_xyz": [ -2.159, 8.654, -0.748 ], "P_xyz": [ 0.098, 9.324, 0.417 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.620, "theta": -116.199, "eta_prime": -167.790, "theta_prime": -143.947, "eta_base": -131.839, "theta_base": -106.700, "v0": -23.272, "v1": 38.809, "v2": -38.486, "v3": 25.998, "v4": -1.989, "amplitude": 40.048, "phase_angle": 163.942, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 192.353, 159.625, 335.210 ], "x_axis": [ 0.234, -0.944, 0.233 ], "y_axis": [ 0.501, 0.323, 0.803 ], "z_axis": [ -0.833, -0.071, 0.548 ], "quaternion": [ 0.725, 0.301, -0.368, -0.498 ] } }, { "index": 456, "index_chain": 456, "chain_name": "a", "nt_resnum": 457, "nt_name": "U", "nt_code": "U", "nt_id": "///a/457", "linked_nts": [ "///a/456", "///a/458" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -44.136, "beta": -176.355, "gamma": 10.544, "delta": 75.492, "epsilon": -145.029, "zeta": -52.902, "epsilon_zeta": -92.127, "bb_type": "BI", "chi": -160.024, "glyco_bond": "anti", "C5prime_xyz": [ -1.760, 8.856, 0.442 ], "P_xyz": [ 0.093, 10.316, 1.546 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.300, "theta": -142.539, "eta_prime": 166.363, "theta_prime": -130.785, "eta_base": -135.488, "theta_base": -69.912, "v0": -1.823, "v1": -23.481, "v2": 38.309, "v3": -40.310, "v4": 26.607, "amplitude": 41.034, "phase_angle": 21.000, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.104, "frame": { "rmsd": 0.007, "origin": [ 186.767, 158.948, 337.782 ], "x_axis": [ 0.338, -0.478, 0.811 ], "y_axis": [ 0.664, 0.732, 0.154 ], "z_axis": [ -0.667, 0.486, 0.565 ], "quaternion": [ 0.812, -0.102, -0.455, -0.352 ] } }, { "index": 457, "index_chain": 457, "chain_name": "a", "nt_resnum": 458, "nt_name": "U", "nt_code": "U", "nt_id": "///a/458", "linked_nts": [ "///a/457", "///a/459" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -84.223, "beta": 168.094, "gamma": 78.980, "delta": 80.544, "epsilon": -133.066, "zeta": -110.507, "epsilon_zeta": -22.559, "bb_type": "--", "chi": -154.302, "glyco_bond": "anti", "C5prime_xyz": [ -1.652, 8.802, 0.157 ], "P_xyz": [ 0.773, 9.400, -0.642 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.311, "theta": -127.876, "eta_prime": -165.597, "theta_prime": -170.658, "eta_base": -94.092, "theta_base": 151.496, "v0": -0.859, "v1": -21.739, "v2": 34.772, "v3": -36.210, "v4": 23.393, "amplitude": 36.978, "phase_angle": 19.892, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.108, "filter_rmsd": 0.104, "frame": { "rmsd": 0.005, "origin": [ 187.486, 158.775, 342.586 ], "x_axis": [ 0.748, 0.286, 0.599 ], "y_axis": [ -0.078, 0.934, -0.349 ], "z_axis": [ -0.659, 0.214, 0.721 ], "quaternion": [ 0.922, -0.152, -0.341, 0.099 ] } }, { "index": 458, "index_chain": 458, "chain_name": "a", "nt_resnum": 459, "nt_name": "A", "nt_code": "A", "nt_id": "///a/459", "linked_nts": [ "///a/458", "///a/460" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,BI", "alpha": 143.508, "beta": -131.944, "gamma": 49.829, "delta": 141.999, "epsilon": -144.024, "zeta": -97.737, "epsilon_zeta": -46.287, "bb_type": "BI", "chi": -49.254, "glyco_bond": "--", "C5prime_xyz": [ -3.389, 5.806, -3.319 ], "P_xyz": [ -1.481, 6.952, -4.713 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 33.478, "theta": -114.918, "eta_prime": 55.248, "theta_prime": -122.473, "eta_base": 22.599, "theta_base": -84.710, "v0": -18.481, "v1": 31.110, "v2": -31.303, "v3": 21.343, "v4": -2.029, "amplitude": 32.442, "phase_angle": 164.776, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.038, "frame": { "rmsd": 0.012, "origin": [ 174.179, 163.647, 340.074 ], "x_axis": [ -0.046, 0.022, -0.999 ], "y_axis": [ 0.963, -0.264, -0.050 ], "z_axis": [ -0.265, -0.964, -0.009 ], "quaternion": [ -0.413, -0.554, -0.445, 0.570 ] } }, { "index": 459, "index_chain": 459, "chain_name": "a", "nt_resnum": 460, "nt_name": "A", "nt_code": "A", "nt_id": "///a/460", "linked_nts": [ "///a/459", "///a/461" ], "nt_type": "RNA", "dbn": ".", "summary": "BII,non-canonical,helix-end", "alpha": -63.070, "beta": 164.320, "gamma": 37.912, "delta": 80.543, "epsilon": -100.871, "zeta": -163.978, "epsilon_zeta": 63.107, "bb_type": "BII", "chi": -89.707, "glyco_bond": "--", "C5prime_xyz": [ -2.885, 7.339, -2.932 ], "P_xyz": [ -0.976, 7.534, -4.696 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.922, "theta": -140.663, "eta_prime": -175.560, "theta_prime": -121.659, "eta_base": -146.054, "theta_base": -93.642, "v0": -5.486, "v1": -17.731, "v2": 32.700, "v3": -36.866, "v4": 26.742, "amplitude": 36.712, "phase_angle": 27.038, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.037, "filter_rmsd": 0.037, "frame": { "rmsd": 0.013, "origin": [ 178.661, 161.093, 336.528 ], "x_axis": [ 0.551, 0.677, -0.488 ], "y_axis": [ 0.815, -0.310, 0.489 ], "z_axis": [ 0.180, -0.668, -0.722 ], "quaternion": [ 0.360, 0.804, 0.464, -0.096 ] } }, { "index": 460, "index_chain": 460, "chain_name": "a", "nt_resnum": 461, "nt_name": "U", "nt_code": "U", "nt_id": "///a/461", "linked_nts": [ "///a/460", "///a/462" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BII,non-stack,non-canonical,multiplet", "alpha": 138.002, "beta": -85.646, "gamma": -132.959, "delta": 152.040, "epsilon": -88.582, "zeta": 123.836, "epsilon_zeta": 147.582, "bb_type": "BII", "chi": -132.148, "glyco_bond": "anti", "C5prime_xyz": [ -1.502, 8.543, -0.437 ], "P_xyz": [ -0.937, 9.264, -2.906 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -37.956, "theta": 68.610, "eta_prime": -72.077, "theta_prime": 76.319, "eta_base": -99.270, "theta_base": 62.749, "v0": -15.531, "v1": 32.565, "v2": -36.213, "v3": 28.263, "v4": -8.212, "amplitude": 36.409, "phase_angle": 174.047, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.105, "frame": { "rmsd": 0.004, "origin": [ 193.885, 161.075, 339.309 ], "x_axis": [ 0.167, 0.616, 0.770 ], "y_axis": [ -0.619, -0.542, 0.568 ], "z_axis": [ 0.767, -0.571, 0.291 ], "quaternion": [ 0.478, 0.595, -0.001, 0.645 ] } }, { "index": 461, "index_chain": 461, "chain_name": "a", "nt_resnum": 462, "nt_name": "A", "nt_code": "A", "nt_id": "///a/462", "linked_nts": [ "///a/461", "///a/463" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,non-canonical,helix", "alpha": 70.433, "beta": 146.520, "gamma": 172.861, "delta": 83.454, "epsilon": -107.979, "zeta": -88.399, "epsilon_zeta": -19.580, "bb_type": "--", "chi": 32.189, "glyco_bond": "syn", "C5prime_xyz": [ -5.612, 3.773, 0.222 ], "P_xyz": [ -7.316, 3.210, 2.139 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 112.753, "theta": -162.840, "eta_prime": 91.090, "theta_prime": -142.606, "eta_base": 99.211, "theta_base": -134.369, "v0": -4.540, "v1": -17.217, "v2": 30.970, "v3": -34.466, "v4": 24.619, "amplitude": 34.446, "phase_angle": 25.961, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "6n", "suiteness": 0.052, "filter_rmsd": 0.045, "frame": { "rmsd": 0.019, "origin": [ 185.281, 159.833, 336.536 ], "x_axis": [ -0.739, 0.614, -0.278 ], "y_axis": [ -0.551, -0.788, -0.277 ], "z_axis": [ -0.388, -0.051, 0.920 ], "quaternion": [ 0.314, -0.179, -0.088, 0.928 ] } }, { "index": 462, "index_chain": 462, "chain_name": "a", "nt_resnum": 463, "nt_name": "C", "nt_code": "C", "nt_id": "///a/463", "linked_nts": [ "///a/462", "///a/464" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -38.118, "beta": 139.757, "gamma": 53.958, "delta": 83.454, "epsilon": -127.574, "zeta": -64.931, "epsilon_zeta": -62.643, "bb_type": "BI", "chi": -159.238, "glyco_bond": "anti", "C5prime_xyz": [ -1.334, 8.762, 0.509 ], "P_xyz": [ 1.252, 8.641, 0.077 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.110, "theta": -112.285, "eta_prime": -161.819, "theta_prime": -113.930, "eta_base": -146.908, "theta_base": -71.306, "v0": 1.464, "v1": -23.043, "v2": 34.624, "v3": -34.686, "v4": 20.967, "amplitude": 36.072, "phase_angle": 16.293, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.655, "filter_rmsd": 0.066, "frame": { "rmsd": 0.010, "origin": [ 187.725, 161.337, 334.005 ], "x_axis": [ 0.604, -0.129, 0.787 ], "y_axis": [ -0.014, -0.988, -0.151 ], "z_axis": [ 0.797, 0.080, -0.599 ], "quaternion": [ -0.065, 0.893, -0.040, 0.443 ] } }, { "index": 463, "index_chain": 463, "chain_name": "a", "nt_resnum": 464, "nt_name": "C", "nt_code": "C", "nt_id": "///a/464", "linked_nts": [ "///a/463", "///a/465" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": -64.683, "beta": 161.234, "gamma": 60.743, "delta": 79.227, "epsilon": -148.609, "zeta": -74.272, "epsilon_zeta": -74.336, "bb_type": "BI", "chi": -151.267, "glyco_bond": "anti", "C5prime_xyz": [ -1.677, 8.886, -0.042 ], "P_xyz": [ 0.825, 9.449, -0.568 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.626, "theta": -146.914, "eta_prime": -173.176, "theta_prime": -150.486, "eta_base": -105.103, "theta_base": -131.448, "v0": -2.219, "v1": -21.142, "v2": 35.170, "v3": -37.356, "v4": 24.946, "amplitude": 37.889, "phase_angle": 21.838, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.684, "filter_rmsd": 0.062, "frame": { "rmsd": 0.006, "origin": [ 191.997, 159.936, 335.365 ], "x_axis": [ 0.203, -0.853, 0.481 ], "y_axis": [ -0.232, -0.519, -0.823 ], "z_axis": [ 0.951, 0.055, -0.304 ], "quaternion": [ -0.308, 0.712, -0.381, 0.503 ] } }, { "index": 464, "index_chain": 464, "chain_name": "a", "nt_resnum": 465, "nt_name": "U", "nt_code": "U", "nt_id": "///a/465", "linked_nts": [ "///a/464", "///a/466" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -67.347, "beta": 168.620, "gamma": 55.055, "delta": 77.273, "epsilon": -141.653, "zeta": -73.866, "epsilon_zeta": -67.786, "bb_type": "BI", "chi": -159.257, "glyco_bond": "anti", "C5prime_xyz": [ -1.687, 8.848, 0.414 ], "P_xyz": [ 0.799, 9.638, 0.397 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.969, "theta": -143.866, "eta_prime": 173.754, "theta_prime": -140.825, "eta_base": -152.898, "theta_base": -97.610, "v0": -2.479, "v1": -21.713, "v2": 36.292, "v3": -38.690, "v4": 25.949, "amplitude": 39.176, "phase_angle": 22.123, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.941, "filter_rmsd": 0.101, "frame": { "rmsd": 0.008, "origin": [ 195.496, 159.952, 335.723 ], "x_axis": [ -0.239, -0.962, 0.132 ], "y_axis": [ -0.221, -0.078, -0.972 ], "z_axis": [ 0.946, -0.261, -0.194 ], "quaternion": [ 0.350, -0.508, 0.582, -0.530 ] } }, { "index": 465, "index_chain": 465, "chain_name": "a", "nt_resnum": 466, "nt_name": "U", "nt_code": "U", "nt_id": "///a/466", "linked_nts": [ "///a/465", "///a/467" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -67.681, "beta": 170.011, "gamma": 54.928, "delta": 80.071, "epsilon": -152.002, "zeta": -77.334, "epsilon_zeta": -74.668, "bb_type": "BI", "chi": -164.268, "glyco_bond": "anti", "C5prime_xyz": [ -1.331, 8.650, 0.800 ], "P_xyz": [ 1.278, 8.941, 0.890 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.921, "theta": -152.658, "eta_prime": 177.177, "theta_prime": -155.229, "eta_base": -123.136, "theta_base": -102.152, "v0": 4.821, "v1": -27.385, "v2": 38.370, "v3": -36.460, "v4": 19.917, "amplitude": 39.166, "phase_angle": 11.568, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.929, "filter_rmsd": 0.113, "frame": { "rmsd": 0.012, "origin": [ 198.081, 156.581, 335.270 ], "x_axis": [ -0.595, -0.611, -0.523 ], "y_axis": [ 0.063, 0.613, -0.788 ], "z_axis": [ 0.801, -0.501, -0.326 ], "quaternion": [ 0.416, -0.172, 0.796, -0.405 ] } }, { "index": 466, "index_chain": 466, "chain_name": "a", "nt_resnum": 467, "nt_name": "G", "nt_code": "G", "nt_id": "///a/467", "linked_nts": [ "///a/466", "///a/468" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BI,non-canonical,helix", "alpha": -60.775, "beta": 179.069, "gamma": 60.660, "delta": 71.256, "epsilon": -140.059, "zeta": -54.983, "epsilon_zeta": -85.076, "bb_type": "BI", "chi": 8.924, "glyco_bond": "syn", "C5prime_xyz": [ -5.731, 4.494, -1.124 ], "P_xyz": [ -6.508, 2.080, -1.751 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -179.036, "theta": -133.061, "eta_prime": -176.678, "theta_prime": -125.374, "eta_base": -117.969, "theta_base": -128.923, "v0": -6.365, "v1": -20.078, "v2": 37.378, "v3": -42.078, "v4": 30.550, "amplitude": 41.995, "phase_angle": 27.118, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.687, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 200.224, 154.923, 333.082 ], "x_axis": [ -0.137, -0.833, 0.535 ], "y_axis": [ 0.719, 0.288, 0.632 ], "z_axis": [ -0.681, 0.472, 0.560 ], "quaternion": [ 0.654, 0.061, -0.465, -0.593 ] } }, { "index": 467, "index_chain": 467, "chain_name": "a", "nt_resnum": 468, "nt_name": "C", "nt_code": "C", "nt_id": "///a/468", "linked_nts": [ "///a/467", "///a/469" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -76.431, "beta": 165.063, "gamma": 68.471, "delta": 81.615, "epsilon": -147.628, "zeta": -86.520, "epsilon_zeta": -61.108, "bb_type": "BI", "chi": -167.554, "glyco_bond": "anti", "C5prime_xyz": [ -1.197, 8.694, 1.002 ], "P_xyz": [ 1.423, 8.943, 0.854 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.013, "theta": -153.039, "eta_prime": -170.032, "theta_prime": -154.959, "eta_base": -153.586, "theta_base": -147.102, "v0": 2.370, "v1": -24.041, "v2": 35.429, "v3": -34.889, "v4": 20.540, "amplitude": 36.662, "phase_angle": 14.902, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.419, "filter_rmsd": 0.069, "frame": { "rmsd": 0.010, "origin": [ 201.479, 151.696, 332.111 ], "x_axis": [ -0.263, 0.559, -0.786 ], "y_axis": [ 0.745, 0.636, 0.203 ], "z_axis": [ 0.613, -0.532, -0.584 ], "quaternion": [ 0.444, 0.414, 0.788, -0.104 ] } }, { "index": 468, "index_chain": 468, "chain_name": "a", "nt_resnum": 469, "nt_name": "U", "nt_code": "U", "nt_id": "///a/469", "linked_nts": [ "///a/468", "///a/470" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -49.264, "beta": 161.175, "gamma": 51.697, "delta": 78.552, "epsilon": -137.088, "zeta": -83.732, "epsilon_zeta": -53.356, "bb_type": "BI", "chi": -166.387, "glyco_bond": "anti", "C5prime_xyz": [ -1.534, 8.770, 0.863 ], "P_xyz": [ 1.020, 9.241, 1.156 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.657, "theta": -144.913, "eta_prime": -175.635, "theta_prime": -143.324, "eta_base": -156.187, "theta_base": -114.638, "v0": -1.508, "v1": -21.776, "v2": 35.551, "v3": -37.351, "v4": 24.466, "amplitude": 38.028, "phase_angle": 20.794, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.667, "filter_rmsd": 0.106, "frame": { "rmsd": 0.008, "origin": [ 202.179, 148.145, 330.443 ], "x_axis": [ -0.010, 0.765, -0.644 ], "y_axis": [ 0.800, 0.392, 0.454 ], "z_axis": [ 0.600, -0.510, -0.616 ], "quaternion": [ 0.438, 0.551, 0.710, -0.020 ] } }, { "index": 469, "index_chain": 469, "chain_name": "a", "nt_resnum": 470, "nt_name": "G", "nt_code": "G", "nt_id": "///a/470", "linked_nts": [ "///a/469", "///a/471" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -50.388, "beta": 158.092, "gamma": 48.867, "delta": 78.686, "epsilon": -145.138, "zeta": -77.508, "epsilon_zeta": -67.630, "bb_type": "BI", "chi": -169.724, "glyco_bond": "anti", "C5prime_xyz": [ -1.689, 8.715, 1.046 ], "P_xyz": [ 0.851, 9.253, 1.307 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.396, "theta": -146.258, "eta_prime": 179.940, "theta_prime": -144.659, "eta_base": -135.805, "theta_base": -108.228, "v0": -0.088, "v1": -23.554, "v2": 36.883, "v3": -37.901, "v4": 23.951, "amplitude": 38.935, "phase_angle": 18.683, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.672, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 203.399, 146.745, 326.990 ], "x_axis": [ 0.321, 0.928, -0.188 ], "y_axis": [ 0.659, -0.076, 0.749 ], "z_axis": [ 0.681, -0.364, -0.636 ], "quaternion": [ 0.390, 0.713, 0.556, 0.173 ] } }, { "index": 470, "index_chain": 470, "chain_name": "a", "nt_resnum": 471, "nt_name": "U", "nt_code": "U", "nt_id": "///a/471", "linked_nts": [ "///a/470", "///a/472" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -61.626, "beta": 163.040, "gamma": 60.206, "delta": 81.222, "epsilon": -145.022, "zeta": -72.467, "epsilon_zeta": -72.554, "bb_type": "BI", "chi": -162.988, "glyco_bond": "anti", "C5prime_xyz": [ -1.399, 8.724, 0.702 ], "P_xyz": [ 1.200, 9.074, 0.576 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.415, "theta": -142.389, "eta_prime": -175.057, "theta_prime": -145.252, "eta_base": -123.097, "theta_base": -120.360, "v0": 1.510, "v1": -23.586, "v2": 35.527, "v3": -35.556, "v4": 21.471, "amplitude": 37.011, "phase_angle": 16.279, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.866, "filter_rmsd": 0.108, "frame": { "rmsd": 0.009, "origin": [ 205.181, 147.135, 324.072 ], "x_axis": [ 0.677, 0.671, 0.302 ], "y_axis": [ 0.393, -0.676, 0.624 ], "z_axis": [ 0.622, -0.304, -0.721 ], "quaternion": [ 0.264, 0.877, 0.303, 0.264 ] } }, { "index": 471, "index_chain": 471, "chain_name": "a", "nt_resnum": 472, "nt_name": "U", "nt_code": "U", "nt_id": "///a/472", "linked_nts": [ "///a/471", "///a/473" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -80.952, "beta": 161.670, "gamma": 74.026, "delta": 78.881, "epsilon": -138.439, "zeta": -81.680, "epsilon_zeta": -56.758, "bb_type": "BI", "chi": -164.719, "glyco_bond": "anti", "C5prime_xyz": [ -1.472, 8.725, 0.787 ], "P_xyz": [ 1.018, 9.296, 0.244 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.179, "theta": -150.913, "eta_prime": 178.108, "theta_prime": -153.398, "eta_base": -139.052, "theta_base": -135.099, "v0": 1.573, "v1": -25.061, "v2": 37.681, "v3": -37.701, "v4": 22.777, "amplitude": 39.253, "phase_angle": 16.269, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.316, "filter_rmsd": 0.108, "frame": { "rmsd": 0.008, "origin": [ 207.088, 147.725, 321.565 ], "x_axis": [ 0.744, 0.235, 0.625 ], "y_axis": [ 0.087, -0.962, 0.259 ], "z_axis": [ 0.662, -0.139, -0.736 ], "quaternion": [ 0.107, 0.928, 0.087, 0.347 ] } }, { "index": 472, "index_chain": 472, "chain_name": "a", "nt_resnum": 473, "nt_name": "U", "nt_code": "U", "nt_id": "///a/473", "linked_nts": [ "///a/472", "///a/474" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -76.592, "beta": 150.060, "gamma": 79.803, "delta": 82.392, "epsilon": -151.165, "zeta": -69.307, "epsilon_zeta": -81.858, "bb_type": "BI", "chi": -156.907, "glyco_bond": "anti", "C5prime_xyz": [ -1.515, 8.766, 0.324 ], "P_xyz": [ 0.847, 9.180, -0.721 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.329, "theta": -145.728, "eta_prime": -178.982, "theta_prime": -144.275, "eta_base": -144.506, "theta_base": -173.662, "v0": 0.354, "v1": -22.145, "v2": 34.278, "v3": -34.900, "v4": 21.879, "amplitude": 36.042, "phase_angle": 18.001, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.109, "filter_rmsd": 0.104, "frame": { "rmsd": 0.009, "origin": [ 208.659, 148.717, 319.938 ], "x_axis": [ 0.724, -0.208, 0.657 ], "y_axis": [ -0.014, -0.958, -0.288 ], "z_axis": [ 0.689, 0.199, -0.696 ], "quaternion": [ -0.133, 0.919, -0.060, 0.366 ] } }, { "index": 473, "index_chain": 473, "chain_name": "a", "nt_resnum": 474, "nt_name": "U", "nt_code": "U", "nt_id": "///a/474", "linked_nts": [ "///a/473", "///a/475" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -73.189, "beta": -146.039, "gamma": 43.497, "delta": 140.459, "epsilon": -152.882, "zeta": -110.109, "epsilon_zeta": -42.773, "bb_type": "BI", "chi": -76.842, "glyco_bond": "anti", "C5prime_xyz": [ -3.107, 7.183, -2.837 ], "P_xyz": [ -1.263, 8.903, -3.554 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.565, "theta": -148.857, "eta_prime": -168.086, "theta_prime": -140.269, "eta_base": 168.712, "theta_base": -137.036, "v0": -23.838, "v1": 34.789, "v2": -31.842, "v3": 18.916, "v4": 2.951, "amplitude": 34.729, "phase_angle": 156.475, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1[", "suiteness": 0.710, "filter_rmsd": 0.105, "frame": { "rmsd": 0.010, "origin": [ 209.438, 151.649, 317.288 ], "x_axis": [ 0.493, -0.288, 0.821 ], "y_axis": [ 0.368, -0.786, -0.497 ], "z_axis": [ 0.788, 0.547, -0.281 ], "quaternion": [ -0.326, 0.800, 0.025, 0.503 ] } }, { "index": 474, "index_chain": 474, "chain_name": "a", "nt_resnum": 475, "nt_name": "G", "nt_code": "G", "nt_id": "///a/475", "linked_nts": [ "///a/474", "///a/476" ], "nt_type": "RNA", "dbn": ".", "summary": "BII", "alpha": -82.049, "beta": -125.761, "gamma": 30.016, "delta": 142.092, "epsilon": -130.396, "zeta": 173.627, "epsilon_zeta": 55.977, "bb_type": "BII", "chi": -60.388, "glyco_bond": "--", "C5prime_xyz": [ -3.535, 6.496, -3.083 ], "P_xyz": [ -2.383, 8.573, -4.165 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -163.877, "theta": 136.906, "eta_prime": -168.708, "theta_prime": 130.820, "eta_base": -164.138, "theta_base": 149.158, "v0": -24.306, "v1": 35.577, "v2": -32.663, "v3": 19.540, "v4": 2.762, "amplitude": 35.539, "phase_angle": 156.791, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 218.137, 153.336, 312.042 ], "x_axis": [ 0.418, -0.461, 0.783 ], "y_axis": [ -0.218, -0.887, -0.406 ], "z_axis": [ 0.882, -0.001, -0.472 ], "quaternion": [ -0.122, 0.833, -0.204, 0.499 ] } }, { "index": 475, "index_chain": 475, "chain_name": "a", "nt_resnum": 476, "nt_name": "A", "nt_code": "A", "nt_id": "///a/476", "linked_nts": [ "///a/475", "///a/477" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI", "alpha": -137.618, "beta": 151.434, "gamma": 55.440, "delta": 84.891, "epsilon": -131.776, "zeta": -50.693, "epsilon_zeta": -81.083, "bb_type": "BI", "chi": -175.694, "glyco_bond": "anti", "C5prime_xyz": [ -1.123, 8.309, 1.449 ], "P_xyz": [ 1.490, 8.139, 1.432 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 133.662, "theta": -102.511, "eta_prime": 122.785, "theta_prime": -101.180, "eta_base": 150.165, "theta_base": -57.199, "v0": 5.799, "v1": -26.358, "v2": 35.783, "v3": -33.421, "v4": 17.482, "amplitude": 36.297, "phase_angle": 9.660, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "4g", "suiteness": 0.428, "filter_rmsd": 0.041, "frame": { "rmsd": 0.018, "origin": [ 218.518, 154.957, 304.815 ], "x_axis": [ 0.073, -0.320, 0.945 ], "y_axis": [ -0.628, -0.750, -0.206 ], "z_axis": [ 0.775, -0.578, -0.256 ], "quaternion": [ 0.129, 0.721, -0.329, 0.596 ] } }, { "index": 476, "index_chain": 476, "chain_name": "a", "nt_resnum": 477, "nt_name": "C", "nt_code": "C", "nt_id": "///a/477", "linked_nts": [ "///a/476", "///a/478" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end", "alpha": -77.481, "beta": 176.823, "gamma": 66.977, "delta": 84.618, "epsilon": -102.349, "zeta": -36.273, "epsilon_zeta": -66.076, "bb_type": "--", "chi": -149.874, "glyco_bond": "anti", "C5prime_xyz": [ -1.482, 8.813, -0.064 ], "P_xyz": [ 1.107, 9.184, -0.330 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.223, "theta": -46.832, "eta_prime": -155.592, "theta_prime": -76.876, "eta_base": -87.966, "theta_base": -125.548, "v0": -0.417, "v1": -20.790, "v2": 32.888, "v3": -33.970, "v4": 21.765, "amplitude": 34.837, "phase_angle": 19.258, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.458, "filter_rmsd": 0.061, "frame": { "rmsd": 0.011, "origin": [ 220.155, 150.642, 308.045 ], "x_axis": [ -0.487, -0.844, 0.226 ], "y_axis": [ -0.162, -0.167, -0.973 ], "z_axis": [ 0.858, -0.510, -0.056 ], "quaternion": [ -0.270, 0.429, -0.586, 0.632 ] } }, { "index": 477, "index_chain": 477, "chain_name": "a", "nt_resnum": 478, "nt_name": "G", "nt_code": "G", "nt_id": "///a/478", "linked_nts": [ "///a/477", "///a/479" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -177.201, "beta": -177.974, "gamma": 71.246, "delta": 145.901, "epsilon": -64.009, "zeta": 96.147, "epsilon_zeta": 199.844, "bb_type": "--", "chi": -143.126, "glyco_bond": "anti", "C5prime_xyz": [ -1.804, 8.826, -0.021 ], "P_xyz": [ 0.456, 9.410, 1.176 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 88.065, "theta": 150.727, "eta_prime": 137.922, "theta_prime": 97.722, "eta_base": 115.386, "theta_base": 73.849, "v0": -24.482, "v1": 38.085, "v2": -36.323, "v3": 23.165, "v4": 0.565, "amplitude": 38.575, "phase_angle": 160.327, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 222.690, 148.641, 308.063 ], "x_axis": [ 0.390, 0.920, 0.045 ], "y_axis": [ 0.126, -0.005, -0.992 ], "z_axis": [ -0.912, 0.393, -0.118 ], "quaternion": [ 0.563, -0.615, -0.425, 0.352 ] } }, { "index": 478, "index_chain": 478, "chain_name": "a", "nt_resnum": 479, "nt_name": "U", "nt_code": "U", "nt_id": "///a/479", "linked_nts": [ "///a/478", "///a/480" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-stack", "alpha": 63.536, "beta": -172.751, "gamma": 57.657, "delta": 141.312, "epsilon": -121.581, "zeta": -77.615, "epsilon_zeta": -43.966, "bb_type": "--", "chi": 46.499, "glyco_bond": "syn", "C5prime_xyz": [ -5.677, 4.285, 0.571 ], "P_xyz": [ -6.314, 1.951, -0.455 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 18.330, "theta": -22.855, "eta_prime": 13.479, "theta_prime": -57.287, "eta_base": 13.878, "theta_base": 3.577, "v0": -25.246, "v1": 36.870, "v2": -33.719, "v3": 20.071, "v4": 3.053, "amplitude": 36.765, "phase_angle": 156.511, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "6p", "suiteness": 0.267, "filter_rmsd": 0.110, "frame": { "rmsd": 0.008, "origin": [ 224.385, 139.985, 294.856 ], "x_axis": [ 0.685, -0.398, -0.610 ], "y_axis": [ 0.691, 0.087, 0.718 ], "z_axis": [ -0.233, -0.913, 0.335 ], "quaternion": [ 0.726, 0.562, 0.130, -0.375 ] } }, { "index": 479, "index_chain": 479, "chain_name": "a", "nt_resnum": 480, "nt_name": "U", "nt_code": "U", "nt_id": "///a/480", "linked_nts": [ "///a/479", "///a/481" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": 103.927, "beta": 100.222, "gamma": 32.862, "delta": 80.617, "epsilon": -143.354, "zeta": -85.483, "epsilon_zeta": -57.871, "bb_type": "BI", "chi": -145.762, "glyco_bond": "anti", "C5prime_xyz": [ -2.075, 8.860, -0.408 ], "P_xyz": [ 0.533, 8.639, -0.344 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -130.205, "theta": -137.617, "eta_prime": -81.270, "theta_prime": -143.524, "eta_base": -135.286, "theta_base": -117.346, "v0": -7.751, "v1": -15.154, "v2": 30.748, "v3": -36.100, "v4": 27.706, "amplitude": 35.795, "phase_angle": 30.796, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.098, "frame": { "rmsd": 0.009, "origin": [ 225.672, 148.253, 311.353 ], "x_axis": [ 0.004, -0.914, 0.405 ], "y_axis": [ 0.176, -0.398, -0.900 ], "z_axis": [ 0.984, 0.075, 0.160 ], "quaternion": [ -0.438, 0.557, -0.331, 0.623 ] } }, { "index": 480, "index_chain": 480, "chain_name": "a", "nt_resnum": 481, "nt_name": "A", "nt_code": "A", "nt_id": "///a/481", "linked_nts": [ "///a/480", "///a/482" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -79.099, "beta": 152.468, "gamma": 77.215, "delta": 81.122, "epsilon": -125.361, "zeta": -48.536, "epsilon_zeta": -76.825, "bb_type": "--", "chi": -168.889, "glyco_bond": "anti", "C5prime_xyz": [ -1.376, 8.529, 1.018 ], "P_xyz": [ 1.048, 8.958, 0.131 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.399, "theta": -105.104, "eta_prime": -179.376, "theta_prime": -104.635, "eta_base": -136.282, "theta_base": -54.122, "v0": 4.849, "v1": -27.395, "v2": 38.337, "v3": -36.533, "v4": 19.971, "amplitude": 39.139, "phase_angle": 11.619, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.177, "filter_rmsd": 0.039, "frame": { "rmsd": 0.015, "origin": [ 230.879, 147.201, 312.192 ], "x_axis": [ -0.059, -0.976, -0.208 ], "y_axis": [ -0.012, 0.209, -0.978 ], "z_axis": [ 0.998, -0.055, -0.024 ], "quaternion": [ 0.530, -0.435, 0.568, -0.455 ] } }, { "index": 481, "index_chain": 481, "chain_name": "a", "nt_resnum": 482, "nt_name": "C", "nt_code": "C", "nt_id": "///a/482", "linked_nts": [ "///a/481", "///a/483" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -80.325, "beta": 162.050, "gamma": 74.784, "delta": 79.428, "epsilon": -146.454, "zeta": -68.738, "epsilon_zeta": -77.716, "bb_type": "BI", "chi": -161.454, "glyco_bond": "anti", "C5prime_xyz": [ -1.372, 8.786, 0.597 ], "P_xyz": [ 1.127, 9.220, -0.078 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.072, "theta": -140.218, "eta_prime": -168.072, "theta_prime": -143.793, "eta_base": -83.323, "theta_base": -125.877, "v0": 1.680, "v1": -24.924, "v2": 37.507, "v3": -37.422, "v4": 22.513, "amplitude": 39.040, "phase_angle": 16.106, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.177, "filter_rmsd": 0.067, "frame": { "rmsd": 0.009, "origin": [ 232.189, 142.545, 308.143 ], "x_axis": [ -0.048, -0.124, -0.991 ], "y_axis": [ 0.378, 0.916, -0.133 ], "z_axis": [ 0.924, -0.381, 0.003 ], "quaternion": [ 0.684, 0.091, 0.700, -0.184 ] } }, { "index": 482, "index_chain": 482, "chain_name": "a", "nt_resnum": 483, "nt_name": "C", "nt_code": "C", "nt_id": "///a/483", "linked_nts": [ "///a/482", "///a/484" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -73.437, "beta": -177.793, "gamma": 55.929, "delta": 78.298, "epsilon": -153.971, "zeta": -77.259, "epsilon_zeta": -76.711, "bb_type": "BI", "chi": -158.889, "glyco_bond": "anti", "C5prime_xyz": [ -1.603, 8.891, 0.399 ], "P_xyz": [ 0.873, 9.677, 0.687 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.869, "theta": -156.712, "eta_prime": 177.178, "theta_prime": -155.410, "eta_base": -148.739, "theta_base": -128.576, "v0": -2.056, "v1": -21.973, "v2": 36.236, "v3": -38.361, "v4": 25.468, "amplitude": 38.944, "phase_angle": 21.492, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.904, "filter_rmsd": 0.061, "frame": { "rmsd": 0.008, "origin": [ 234.655, 139.571, 307.111 ], "x_axis": [ -0.146, 0.475, -0.868 ], "y_axis": [ 0.416, 0.825, 0.382 ], "z_axis": [ 0.898, -0.305, -0.318 ], "quaternion": [ 0.584, 0.294, 0.756, 0.025 ] } }, { "index": 483, "index_chain": 483, "chain_name": "a", "nt_resnum": 484, "nt_name": "A", "nt_code": "A", "nt_id": "///a/484", "linked_nts": [ "///a/483", "///a/485" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -64.188, "beta": 167.496, "gamma": 55.310, "delta": 78.986, "epsilon": -147.683, "zeta": -76.397, "epsilon_zeta": -71.287, "bb_type": "BI", "chi": -164.900, "glyco_bond": "anti", "C5prime_xyz": [ -1.375, 8.646, 0.793 ], "P_xyz": [ 1.213, 9.076, 0.788 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.044, "theta": -148.669, "eta_prime": 176.847, "theta_prime": -147.648, "eta_base": -144.036, "theta_base": -126.265, "v0": 3.271, "v1": -26.442, "v2": 38.273, "v3": -37.410, "v4": 21.503, "amplitude": 39.431, "phase_angle": 13.923, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.927, "filter_rmsd": 0.040, "frame": { "rmsd": 0.012, "origin": [ 237.132, 137.830, 305.135 ], "x_axis": [ -0.011, 0.854, -0.520 ], "y_axis": [ 0.465, 0.465, 0.753 ], "z_axis": [ 0.885, -0.234, -0.402 ], "quaternion": [ 0.513, 0.481, 0.685, 0.190 ] } }, { "index": 484, "index_chain": 484, "chain_name": "a", "nt_resnum": 485, "nt_name": "A", "nt_code": "A", "nt_id": "///a/485", "linked_nts": [ "///a/484", "///a/486" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -65.195, "beta": 175.242, "gamma": 54.921, "delta": 82.693, "epsilon": -151.523, "zeta": -78.000, "epsilon_zeta": -73.523, "bb_type": "BI", "chi": -168.060, "glyco_bond": "anti", "C5prime_xyz": [ -1.470, 8.618, 0.978 ], "P_xyz": [ 1.072, 9.046, 1.458 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.632, "theta": -150.103, "eta_prime": -179.276, "theta_prime": -148.318, "eta_base": -144.975, "theta_base": -126.237, "v0": 0.914, "v1": -22.359, "v2": 34.050, "v3": -34.473, "v4": 21.154, "amplitude": 35.636, "phase_angle": 17.157, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.963, "filter_rmsd": 0.036, "frame": { "rmsd": 0.009, "origin": [ 239.300, 137.003, 302.122 ], "x_axis": [ -0.034, 0.997, 0.075 ], "y_axis": [ 0.418, -0.054, 0.907 ], "z_axis": [ 0.908, 0.062, -0.414 ], "quaternion": [ 0.353, 0.599, 0.590, 0.410 ] } }, { "index": 485, "index_chain": 485, "chain_name": "a", "nt_resnum": 486, "nt_name": "C", "nt_code": "C", "nt_id": "///a/486", "linked_nts": [ "///a/485", "///a/487" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -62.924, "beta": 168.386, "gamma": 59.572, "delta": 82.933, "epsilon": -134.290, "zeta": -82.173, "epsilon_zeta": -52.116, "bb_type": "BI", "chi": -155.725, "glyco_bond": "anti", "C5prime_xyz": [ -1.432, 8.837, 0.267 ], "P_xyz": [ 1.167, 9.235, 0.227 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.068, "theta": -141.278, "eta_prime": -172.593, "theta_prime": -141.609, "eta_base": -140.766, "theta_base": -66.812, "v0": -0.391, "v1": -20.815, "v2": 32.870, "v3": -33.999, "v4": 21.706, "amplitude": 34.812, "phase_angle": 19.226, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.903, "filter_rmsd": 0.065, "frame": { "rmsd": 0.007, "origin": [ 241.157, 137.598, 299.437 ], "x_axis": [ 0.235, 0.835, 0.498 ], "y_axis": [ 0.508, -0.542, 0.669 ], "z_axis": [ 0.829, 0.096, -0.552 ], "quaternion": [ 0.188, 0.763, 0.440, 0.435 ] } }, { "index": 486, "index_chain": 486, "chain_name": "a", "nt_resnum": 487, "nt_name": "A", "nt_code": "A", "nt_id": "///a/487", "linked_nts": [ "///a/486", "///a/488" ], "nt_type": "RNA", "dbn": ".", "summary": "syn", "alpha": -67.219, "beta": 175.433, "gamma": 50.331, "delta": 82.598, "epsilon": -96.703, "zeta": -118.298, "epsilon_zeta": 21.595, "bb_type": "--", "chi": 33.689, "glyco_bond": "syn", "C5prime_xyz": [ -5.711, 3.961, 0.351 ], "P_xyz": [ -6.116, 1.385, 0.325 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.898, "theta": -146.402, "eta_prime": -176.868, "theta_prime": -134.718, "eta_base": -102.777, "theta_base": -160.437, "v0": -8.353, "v1": -13.948, "v2": 29.412, "v3": -35.111, "v4": 27.453, "amplitude": 34.752, "phase_angle": 32.184, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.826, "filter_rmsd": 0.040, "frame": { "rmsd": 0.015, "origin": [ 245.720, 137.162, 300.966 ], "x_axis": [ -0.442, 0.869, -0.221 ], "y_axis": [ -0.114, -0.299, -0.947 ], "z_axis": [ -0.889, -0.394, 0.232 ], "quaternion": [ 0.350, -0.395, -0.477, 0.702 ] } }, { "index": 487, "index_chain": 487, "chain_name": "a", "nt_resnum": 488, "nt_name": "G", "nt_code": "G", "nt_id": "///a/488", "linked_nts": [ "///a/487", "///a/489" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -52.418, "beta": 116.803, "gamma": 65.573, "delta": 85.444, "epsilon": -166.028, "zeta": -90.753, "epsilon_zeta": -75.275, "bb_type": "BI", "chi": -131.831, "glyco_bond": "anti", "C5prime_xyz": [ -1.279, 8.536, -1.130 ], "P_xyz": [ 0.617, 7.427, -2.585 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 148.125, "theta": -158.211, "eta_prime": -178.825, "theta_prime": -168.580, "eta_base": 169.295, "theta_base": 178.428, "v0": 5.611, "v1": -25.853, "v2": 35.066, "v3": -32.749, "v4": 17.156, "amplitude": 35.574, "phase_angle": 9.697, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.396, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 247.797, 138.513, 298.993 ], "x_axis": [ 0.223, -0.263, 0.939 ], "y_axis": [ 0.636, -0.691, -0.344 ], "z_axis": [ 0.739, 0.674, 0.013 ], "quaternion": [ -0.369, 0.689, 0.135, 0.609 ] } }, { "index": 488, "index_chain": 488, "chain_name": "a", "nt_resnum": 489, "nt_name": "A", "nt_code": "A", "nt_id": "///a/489", "linked_nts": [ "///a/488", "///a/490" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix", "alpha": -62.511, "beta": -176.529, "gamma": 90.606, "delta": 143.115, "epsilon": -49.824, "zeta": 92.889, "epsilon_zeta": 217.287, "bb_type": "--", "chi": -120.721, "glyco_bond": "anti", "C5prime_xyz": [ -2.709, 8.508, -1.250 ], "P_xyz": [ -0.409, 9.746, -1.449 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -100.989, "theta": 104.721, "eta_prime": -106.349, "theta_prime": 76.095, "eta_base": -133.933, "theta_base": 109.851, "v0": -28.736, "v1": 41.332, "v2": -37.088, "v3": 21.579, "v4": 4.191, "amplitude": 40.848, "phase_angle": 155.226, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.010, "filter_rmsd": 0.037, "frame": { "rmsd": 0.016, "origin": [ 252.895, 144.892, 295.665 ], "x_axis": [ -0.037, -0.122, 0.992 ], "y_axis": [ 0.387, -0.917, -0.099 ], "z_axis": [ 0.922, 0.380, 0.081 ], "quaternion": [ -0.178, 0.671, 0.098, 0.713 ] } }, { "index": 489, "index_chain": 489, "chain_name": "a", "nt_resnum": 490, "nt_name": "A", "nt_code": "A", "nt_id": "///a/490", "linked_nts": [ "///a/489", "///a/491" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,non-canonical,helix-end", "alpha": -170.248, "beta": 121.753, "gamma": 123.471, "delta": 80.943, "epsilon": 170.303, "zeta": 34.488, "epsilon_zeta": 135.815, "bb_type": "--", "chi": 67.156, "glyco_bond": "syn", "C5prime_xyz": [ -5.177, 4.635, 2.176 ], "P_xyz": [ -4.392, 4.814, 4.679 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.249, "theta": -83.009, "eta_prime": 153.329, "theta_prime": -116.336, "eta_base": -167.289, "theta_base": 160.804, "v0": -8.371, "v1": -13.738, "v2": 29.016, "v3": -34.763, "v4": 27.327, "amplitude": 34.375, "phase_angle": 32.423, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.016, "origin": [ 250.365, 143.891, 292.690 ], "x_axis": [ -0.044, 0.032, 0.999 ], "y_axis": [ 0.095, -0.995, 0.036 ], "z_axis": [ 0.995, 0.096, 0.041 ], "quaternion": [ -0.022, 0.691, 0.046, 0.721 ] } }, { "index": 490, "index_chain": 490, "chain_name": "a", "nt_resnum": 491, "nt_name": "U", "nt_code": "U", "nt_id": "///a/491", "linked_nts": [ "///a/490", "///a/492" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,multiplet", "alpha": 172.722, "beta": -162.869, "gamma": 1.209, "delta": 74.651, "epsilon": 41.224, "zeta": 60.965, "epsilon_zeta": -19.741, "bb_type": "--", "chi": -153.235, "glyco_bond": "anti", "C5prime_xyz": [ -1.543, 8.762, 0.127 ], "P_xyz": [ 0.122, 10.319, 1.396 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 71.033, "theta": -171.785, "eta_prime": 112.138, "theta_prime": -166.856, "eta_base": 69.348, "theta_base": -153.629, "v0": 1.717, "v1": -24.415, "v2": 36.643, "v3": -36.648, "v4": 21.978, "amplitude": 38.134, "phase_angle": 16.073, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.104, "frame": { "rmsd": 0.008, "origin": [ 245.496, 144.185, 294.676 ], "x_axis": [ 0.202, -0.783, 0.588 ], "y_axis": [ 0.175, -0.562, -0.808 ], "z_axis": [ 0.964, 0.266, 0.024 ], "quaternion": [ -0.407, 0.660, -0.230, 0.588 ] } }, { "index": 491, "index_chain": 491, "chain_name": "a", "nt_resnum": 492, "nt_name": "A", "nt_code": "A", "nt_id": "///a/492", "linked_nts": [ "///a/491", "///a/493" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-stack,non-canonical,helix-end,multiplet", "alpha": 123.789, "beta": -159.756, "gamma": 136.224, "delta": 80.311, "epsilon": -143.081, "zeta": -166.957, "epsilon_zeta": 23.876, "bb_type": "--", "chi": -142.977, "glyco_bond": "anti", "C5prime_xyz": [ -1.672, 8.726, -0.507 ], "P_xyz": [ 0.108, 9.265, -2.317 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.144, "theta": 124.186, "eta_prime": 170.276, "theta_prime": 161.281, "eta_base": -173.419, "theta_base": 159.513, "v0": 0.071, "v1": -22.891, "v2": 35.630, "v3": -36.605, "v4": 23.031, "amplitude": 37.570, "phase_angle": 18.492, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.017, "origin": [ 247.882, 148.273, 293.548 ], "x_axis": [ 0.682, -0.603, 0.413 ], "y_axis": [ 0.268, -0.319, -0.909 ], "z_axis": [ 0.680, 0.731, -0.056 ], "quaternion": [ 0.572, -0.717, 0.117, -0.381 ] } }, { "index": 492, "index_chain": 492, "chain_name": "a", "nt_resnum": 493, "nt_name": "A", "nt_code": "A", "nt_id": "///a/493", "linked_nts": [ "///a/492", "///a/494" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -174.293, "beta": -163.600, "gamma": 175.480, "delta": 151.603, "epsilon": -133.185, "zeta": -142.588, "epsilon_zeta": 9.403, "bb_type": "--", "chi": -117.151, "glyco_bond": "anti", "C5prime_xyz": [ -1.976, 8.431, -1.260 ], "P_xyz": [ -0.157, 9.034, -3.059 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -110.870, "theta": 154.757, "eta_prime": -151.588, "theta_prime": 152.292, "eta_base": 172.948, "theta_base": -157.299, "v0": -20.841, "v1": 37.227, "v2": -38.481, "v3": 27.394, "v4": -4.344, "amplitude": 39.421, "phase_angle": 167.466, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.014, "origin": [ 249.946, 158.883, 287.115 ], "x_axis": [ 0.099, -0.212, 0.972 ], "y_axis": [ 0.437, -0.869, -0.234 ], "z_axis": [ 0.894, 0.448, 0.007 ], "quaternion": [ -0.243, 0.700, 0.080, 0.667 ] } }, { "index": 493, "index_chain": 493, "chain_name": "a", "nt_resnum": 494, "nt_name": "G", "nt_code": "G", "nt_id": "///a/494", "linked_nts": [ "///a/493", "///a/495" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -88.798, "beta": 102.282, "gamma": 110.544, "delta": 85.006, "epsilon": -123.375, "zeta": -75.017, "epsilon_zeta": -48.358, "bb_type": "--", "chi": -172.611, "glyco_bond": "anti", "C5prime_xyz": [ -1.041, 8.409, 1.321 ], "P_xyz": [ 0.379, 9.062, -0.780 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -173.975, "theta": -139.523, "eta_prime": -167.582, "theta_prime": -146.396, "eta_base": -112.782, "theta_base": -120.533, "v0": 8.030, "v1": -28.603, "v2": 37.070, "v3": -33.409, "v4": 16.045, "amplitude": 37.303, "phase_angle": 6.411, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 254.363, 162.282, 283.603 ], "x_axis": [ 0.988, -0.137, 0.070 ], "y_axis": [ -0.080, -0.847, -0.525 ], "z_axis": [ 0.131, 0.513, -0.848 ], "quaternion": [ -0.270, 0.960, -0.056, 0.052 ] } }, { "index": 494, "index_chain": 494, "chain_name": "a", "nt_resnum": 495, "nt_name": "C", "nt_code": "C", "nt_id": "///a/495", "linked_nts": [ "///a/494", "///a/496" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -71.064, "beta": 171.294, "gamma": 56.910, "delta": 80.057, "epsilon": -142.676, "zeta": -81.039, "epsilon_zeta": -61.636, "bb_type": "BI", "chi": -148.831, "glyco_bond": "anti", "C5prime_xyz": [ -1.737, 8.817, -0.147 ], "P_xyz": [ 0.764, 9.440, -0.459 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.466, "theta": -152.562, "eta_prime": 177.700, "theta_prime": -155.263, "eta_base": -136.913, "theta_base": -138.538, "v0": -0.539, "v1": -22.757, "v2": 36.016, "v3": -37.341, "v4": 23.868, "amplitude": 38.179, "phase_angle": 19.380, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.630, "filter_rmsd": 0.062, "frame": { "rmsd": 0.013, "origin": [ 256.573, 164.300, 282.043 ], "x_axis": [ 0.705, -0.698, -0.121 ], "y_axis": [ -0.570, -0.457, -0.683 ], "z_axis": [ 0.422, 0.551, -0.721 ], "quaternion": [ -0.363, 0.849, -0.373, 0.089 ] } }, { "index": 495, "index_chain": 495, "chain_name": "a", "nt_resnum": 496, "nt_name": "A", "nt_code": "A", "nt_id": "///a/496", "linked_nts": [ "///a/495", "///a/497" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -86.492, "beta": 152.661, "gamma": 82.247, "delta": 78.941, "epsilon": -136.326, "zeta": -77.320, "epsilon_zeta": -59.006, "bb_type": "BI", "chi": -170.619, "glyco_bond": "anti", "C5prime_xyz": [ -1.624, 8.626, 1.110 ], "P_xyz": [ 0.757, 9.332, 0.354 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.089, "theta": -142.744, "eta_prime": 172.002, "theta_prime": -143.363, "eta_base": -157.675, "theta_base": -98.734, "v0": -0.348, "v1": -23.863, "v2": 37.717, "v3": -38.919, "v4": 24.701, "amplitude": 39.905, "phase_angle": 19.060, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.039, "filter_rmsd": 0.040, "frame": { "rmsd": 0.015, "origin": [ 258.916, 166.474, 279.928 ], "x_axis": [ 0.266, -0.955, -0.130 ], "y_axis": [ -0.789, -0.138, -0.599 ], "z_axis": [ 0.554, 0.262, -0.790 ], "quaternion": [ -0.290, 0.741, -0.589, 0.143 ] } }, { "index": 496, "index_chain": 496, "chain_name": "a", "nt_resnum": 497, "nt_name": "C", "nt_code": "C", "nt_id": "///a/497", "linked_nts": [ "///a/496", "///a/498" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -69.648, "beta": 157.197, "gamma": 73.461, "delta": 82.703, "epsilon": -137.559, "zeta": -86.720, "epsilon_zeta": -50.839, "bb_type": "BI", "chi": -151.372, "glyco_bond": "anti", "C5prime_xyz": [ -1.420, 8.761, 0.011 ], "P_xyz": [ 1.013, 8.953, -0.942 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.406, "theta": -146.574, "eta_prime": -170.882, "theta_prime": -147.497, "eta_base": -108.840, "theta_base": -129.535, "v0": 2.859, "v1": -24.756, "v2": 35.970, "v3": -35.225, "v4": 20.481, "amplitude": 37.110, "phase_angle": 14.239, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.357, "filter_rmsd": 0.070, "frame": { "rmsd": 0.016, "origin": [ 261.214, 165.117, 277.849 ], "x_axis": [ -0.207, -0.755, -0.622 ], "y_axis": [ -0.548, 0.616, -0.566 ], "z_axis": [ 0.811, 0.223, -0.541 ], "quaternion": [ 0.466, -0.424, 0.769, -0.111 ] } }, { "index": 497, "index_chain": 497, "chain_name": "a", "nt_resnum": 498, "nt_name": "C", "nt_code": "C", "nt_id": "///a/498", "linked_nts": [ "///a/497", "///a/499" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,canonical,helix,stem-end", "alpha": -63.594, "beta": 165.307, "gamma": 62.333, "delta": 81.572, "epsilon": -126.330, "zeta": 161.387, "epsilon_zeta": 72.283, "bb_type": "BII", "chi": -137.272, "glyco_bond": "anti", "C5prime_xyz": [ -1.609, 8.722, -0.816 ], "P_xyz": [ 0.878, 8.975, -1.584 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.335, "theta": 120.806, "eta_prime": -174.171, "theta_prime": 88.214, "eta_base": -147.632, "theta_base": 5.325, "v0": 0.166, "v1": -22.087, "v2": 34.425, "v3": -35.212, "v4": 22.159, "amplitude": 36.267, "phase_angle": 18.339, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.718, "filter_rmsd": 0.068, "frame": { "rmsd": 0.015, "origin": [ 264.184, 164.901, 275.647 ], "x_axis": [ -0.556, -0.411, -0.722 ], "y_axis": [ -0.196, 0.909, -0.367 ], "z_axis": [ 0.808, -0.063, -0.586 ], "quaternion": [ 0.438, -0.174, 0.873, -0.123 ] } }, { "index": 498, "index_chain": 498, "chain_name": "a", "nt_resnum": 499, "nt_name": "G", "nt_code": "G", "nt_id": "///a/499", "linked_nts": [ "///a/498", "///a/500" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 90.191, "beta": 170.479, "gamma": 69.899, "delta": 79.879, "epsilon": -138.209, "zeta": -77.267, "epsilon_zeta": -60.942, "bb_type": "BI", "chi": -168.945, "glyco_bond": "anti", "C5prime_xyz": [ -1.656, 8.734, 1.016 ], "P_xyz": [ 0.869, 9.369, 1.067 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 13.102, "theta": -144.326, "eta_prime": 29.799, "theta_prime": -144.502, "eta_base": 115.458, "theta_base": -120.923, "v0": -1.713, "v1": -21.691, "v2": 35.517, "v3": -37.508, "v4": 24.743, "amplitude": 38.081, "phase_angle": 21.142, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "3d", "suiteness": 0.036, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 262.813, 182.178, 269.228 ], "x_axis": [ -0.876, -0.476, -0.073 ], "y_axis": [ 0.457, -0.870, 0.184 ], "z_axis": [ -0.151, 0.128, 0.980 ], "quaternion": [ -0.242, -0.058, 0.081, 0.965 ] } }, { "index": 499, "index_chain": 499, "chain_name": "a", "nt_resnum": 500, "nt_name": "G", "nt_code": "G", "nt_id": "///a/500", "linked_nts": [ "///a/499", "///a/501" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -79.636, "beta": 169.416, "gamma": 67.305, "delta": 78.067, "epsilon": -116.482, "zeta": -82.570, "epsilon_zeta": -33.912, "bb_type": "--", "chi": -158.949, "glyco_bond": "anti", "C5prime_xyz": [ -1.588, 8.764, 0.416 ], "P_xyz": [ 0.876, 9.436, -0.077 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.634, "theta": -135.207, "eta_prime": 178.627, "theta_prime": -135.085, "eta_base": -146.929, "theta_base": -101.139, "v0": 1.699, "v1": -25.804, "v2": 38.691, "v3": -38.783, "v4": 23.376, "amplitude": 40.296, "phase_angle": 16.227, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.574, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 260.831, 183.471, 272.360 ], "x_axis": [ -0.492, -0.871, -0.019 ], "y_axis": [ 0.825, -0.473, 0.310 ], "z_axis": [ -0.279, 0.136, 0.951 ], "quaternion": [ -0.497, -0.087, 0.131, 0.854 ] } }, { "index": 500, "index_chain": 500, "chain_name": "a", "nt_resnum": 501, "nt_name": "C", "nt_code": "C", "nt_id": "///a/501", "linked_nts": [ "///a/500", "///a/502" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -83.771, "beta": 153.749, "gamma": 76.596, "delta": 82.063, "epsilon": -99.391, "zeta": -32.202, "epsilon_zeta": -67.189, "bb_type": "--", "chi": -155.915, "glyco_bond": "anti", "C5prime_xyz": [ -1.533, 8.858, 0.244 ], "P_xyz": [ 0.819, 9.328, -0.805 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.668, "theta": -37.759, "eta_prime": 178.999, "theta_prime": -68.887, "eta_base": -137.192, "theta_base": -89.497, "v0": -1.125, "v1": -21.717, "v2": 34.861, "v3": -36.421, "v4": 23.702, "amplitude": 37.152, "phase_angle": 20.226, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.094, "filter_rmsd": 0.067, "frame": { "rmsd": 0.012, "origin": [ 258.822, 181.913, 274.673 ], "x_axis": [ 0.254, -0.936, -0.241 ], "y_axis": [ 0.839, 0.089, 0.537 ], "z_axis": [ -0.482, -0.339, 0.808 ], "quaternion": [ 0.733, 0.299, -0.082, -0.605 ] } }, { "index": 501, "index_chain": 501, "chain_name": "a", "nt_resnum": 502, "nt_name": "U", "nt_code": "U", "nt_id": "///a/502", "linked_nts": [ "///a/501", "///a/503" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,helix-end", "alpha": -179.893, "beta": -157.661, "gamma": 53.190, "delta": 146.376, "epsilon": -89.992, "zeta": 137.212, "epsilon_zeta": 132.796, "bb_type": "BII", "chi": -150.445, "glyco_bond": "anti", "C5prime_xyz": [ -1.843, 8.714, 0.363 ], "P_xyz": [ -0.280, 9.419, 2.324 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 69.926, "theta": 139.760, "eta_prime": 121.838, "theta_prime": 130.118, "eta_base": 136.988, "theta_base": 123.659, "v0": -22.759, "v1": 36.642, "v2": -35.628, "v3": 23.479, "v4": -0.695, "amplitude": 37.422, "phase_angle": 162.190, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.102, "frame": { "rmsd": 0.010, "origin": [ 258.918, 178.382, 276.340 ], "x_axis": [ -0.798, 0.602, 0.031 ], "y_axis": [ 0.345, 0.414, 0.843 ], "z_axis": [ 0.495, 0.683, -0.538 ], "quaternion": [ 0.140, 0.286, 0.829, 0.460 ] } }, { "index": 502, "index_chain": 502, "chain_name": "a", "nt_resnum": 503, "nt_name": "A", "nt_code": "A", "nt_id": "///a/503", "linked_nts": [ "///a/502", "///a/504" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -134.331, "beta": 176.917, "gamma": 38.882, "delta": 85.672, "epsilon": -103.590, "zeta": -106.442, "epsilon_zeta": 2.852, "bb_type": "--", "chi": -147.118, "glyco_bond": "anti", "C5prime_xyz": [ -1.076, 8.638, -0.139 ], "P_xyz": [ 1.488, 8.925, 0.329 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.783, "theta": -134.161, "eta_prime": 145.207, "theta_prime": -126.752, "eta_base": 137.425, "theta_base": -103.949, "v0": 3.665, "v1": -23.667, "v2": 33.603, "v3": -32.439, "v4": 18.226, "amplitude": 34.448, "phase_angle": 12.714, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "4g", "suiteness": 0.306, "filter_rmsd": 0.042, "frame": { "rmsd": 0.016, "origin": [ 259.602, 172.936, 281.067 ], "x_axis": [ -0.197, 0.714, -0.672 ], "y_axis": [ 0.820, 0.495, 0.286 ], "z_axis": [ 0.537, -0.495, -0.683 ], "quaternion": [ 0.392, 0.498, 0.771, -0.068 ] } }, { "index": 503, "index_chain": 503, "chain_name": "a", "nt_resnum": 504, "nt_name": "A", "nt_code": "A", "nt_id": "///a/504", "linked_nts": [ "///a/503", "///a/505" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": -49.165, "beta": 136.850, "gamma": 52.552, "delta": 82.659, "epsilon": -94.980, "zeta": -116.292, "epsilon_zeta": 21.312, "bb_type": "--", "chi": -135.866, "glyco_bond": "anti", "C5prime_xyz": [ -1.885, 8.667, -0.932 ], "P_xyz": [ 0.505, 8.680, -1.965 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.491, "theta": -145.054, "eta_prime": -174.257, "theta_prime": -152.865, "eta_base": -148.771, "theta_base": 175.607, "v0": -3.007, "v1": -19.491, "v2": 33.090, "v3": -35.802, "v4": 24.511, "amplitude": 36.025, "phase_angle": 23.285, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.703, "filter_rmsd": 0.042, "frame": { "rmsd": 0.017, "origin": [ 261.605, 172.456, 278.295 ], "x_axis": [ -0.036, 0.979, -0.201 ], "y_axis": [ 0.948, 0.097, 0.303 ], "z_axis": [ 0.316, -0.180, -0.932 ], "quaternion": [ 0.180, 0.671, 0.718, 0.043 ] } }, { "index": 504, "index_chain": 504, "chain_name": "a", "nt_resnum": 505, "nt_name": "C", "nt_code": "C", "nt_id": "///a/505", "linked_nts": [ "///a/504", "///a/506" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -12.371, "beta": -147.835, "gamma": -68.423, "delta": 152.571, "epsilon": -154.560, "zeta": -158.022, "epsilon_zeta": 3.462, "bb_type": "--", "chi": -94.654, "glyco_bond": "anti", "C5prime_xyz": [ -2.577, 7.919, -2.240 ], "P_xyz": [ -3.017, 9.968, -3.802 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.874, "theta": 163.947, "eta_prime": 155.469, "theta_prime": 152.498, "eta_base": 129.499, "theta_base": -177.356, "v0": -23.779, "v1": 39.758, "v2": -39.500, "v3": 26.739, "v4": -2.090, "amplitude": 41.079, "phase_angle": 164.066, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.059, "frame": { "rmsd": 0.013, "origin": [ 267.732, 163.892, 271.322 ], "x_axis": [ -0.968, 0.228, -0.108 ], "y_axis": [ 0.164, 0.894, 0.418 ], "z_axis": [ 0.191, 0.386, -0.902 ], "quaternion": [ 0.077, 0.101, 0.970, 0.207 ] } }, { "index": 505, "index_chain": 505, "chain_name": "a", "nt_resnum": 506, "nt_name": "U", "nt_code": "U", "nt_id": "///a/506", "linked_nts": [ "///a/505", "///a/507" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 91.691, "beta": -133.654, "gamma": -162.647, "delta": 77.295, "epsilon": 152.182, "zeta": 40.583, "epsilon_zeta": 111.599, "bb_type": "--", "chi": -155.224, "glyco_bond": "anti", "C5prime_xyz": [ -1.608, 8.803, 0.196 ], "P_xyz": [ -0.866, 10.081, -1.985 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.843, "theta": -153.398, "eta_prime": 166.344, "theta_prime": -165.293, "eta_base": -157.093, "theta_base": -138.469, "v0": -0.133, "v1": -22.805, "v2": 35.544, "v3": -36.677, "v4": 23.298, "amplitude": 37.554, "phase_angle": 18.830, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "4n", "suiteness": 0.489, "filter_rmsd": 0.100, "frame": { "rmsd": 0.009, "origin": [ 268.499, 163.444, 268.674 ], "x_axis": [ -0.743, 0.647, -0.171 ], "y_axis": [ 0.598, 0.756, 0.266 ], "z_axis": [ 0.302, 0.095, -0.949 ], "quaternion": [ 0.127, 0.335, 0.928, 0.097 ] } }, { "index": 506, "index_chain": 506, "chain_name": "a", "nt_resnum": 507, "nt_name": "U", "nt_code": "U", "nt_id": "///a/507", "linked_nts": [ "///a/506", "///a/508" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 177.149, "beta": 99.254, "gamma": 135.278, "delta": 83.938, "epsilon": -143.447, "zeta": -59.542, "epsilon_zeta": -83.905, "bb_type": "BI", "chi": -175.105, "glyco_bond": "anti", "C5prime_xyz": [ -1.137, 8.404, 1.456 ], "P_xyz": [ -0.352, 9.917, -0.515 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 139.611, "theta": -161.915, "eta_prime": 161.636, "theta_prime": -157.253, "eta_base": -153.528, "theta_base": -116.461, "v0": 5.979, "v1": -26.898, "v2": 36.509, "v3": -33.920, "v4": 17.621, "amplitude": 37.009, "phase_angle": 9.431, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.110, "frame": { "rmsd": 0.013, "origin": [ 267.736, 163.412, 265.534 ], "x_axis": [ -0.380, 0.913, 0.150 ], "y_axis": [ 0.921, 0.358, 0.153 ], "z_axis": [ 0.086, 0.196, -0.977 ], "quaternion": [ -0.020, 0.557, 0.824, 0.106 ] } }, { "index": 507, "index_chain": 507, "chain_name": "a", "nt_resnum": 508, "nt_name": "C", "nt_code": "C", "nt_id": "///a/508", "linked_nts": [ "///a/507", "///a/509" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -86.011, "beta": -171.021, "gamma": 61.678, "delta": 83.860, "epsilon": -164.331, "zeta": -83.941, "epsilon_zeta": -80.390, "bb_type": "BI", "chi": -160.576, "glyco_bond": "anti", "C5prime_xyz": [ -1.284, 8.787, 0.573 ], "P_xyz": [ 1.268, 9.155, 1.063 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.164, "theta": -133.247, "eta_prime": -177.321, "theta_prime": -140.216, "eta_base": -120.078, "theta_base": -119.712, "v0": 0.202, "v1": -21.137, "v2": 32.836, "v3": -33.584, "v4": 21.070, "amplitude": 34.574, "phase_angle": 18.246, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.538, "filter_rmsd": 0.067, "frame": { "rmsd": 0.011, "origin": [ 266.317, 165.878, 262.689 ], "x_axis": [ 0.404, 0.823, 0.400 ], "y_axis": [ 0.910, -0.406, -0.083 ], "z_axis": [ 0.095, 0.398, -0.913 ], "quaternion": [ -0.146, 0.825, 0.525, 0.150 ] } }, { "index": 508, "index_chain": 508, "chain_name": "a", "nt_resnum": 509, "nt_name": "G", "nt_code": "G", "nt_id": "///a/509", "linked_nts": [ "///a/508", "///a/510" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end,multiplet", "alpha": 170.450, "beta": -152.302, "gamma": 155.370, "delta": 83.037, "epsilon": -118.240, "zeta": -74.265, "epsilon_zeta": -43.975, "bb_type": "--", "chi": -176.787, "glyco_bond": "anti", "C5prime_xyz": [ -1.442, 8.543, 1.530 ], "P_xyz": [ 0.764, 9.635, 0.637 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.153, "theta": -133.520, "eta_prime": 177.864, "theta_prime": -131.269, "eta_base": -145.947, "theta_base": -81.236, "v0": 0.662, "v1": -21.728, "v2": 33.351, "v3": -33.893, "v4": 20.971, "amplitude": 34.980, "phase_angle": 17.556, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.174, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 265.467, 168.433, 260.016 ], "x_axis": [ 0.781, 0.425, 0.459 ], "y_axis": [ 0.590, -0.744, -0.315 ], "z_axis": [ 0.207, 0.516, -0.831 ], "quaternion": [ -0.227, 0.916, 0.277, 0.182 ] } }, { "index": 509, "index_chain": 509, "chain_name": "a", "nt_resnum": 510, "nt_name": "U", "nt_code": "U", "nt_id": "///a/510", "linked_nts": [ "///a/509", "///a/511" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": -56.377, "beta": 160.961, "gamma": 49.328, "delta": 85.462, "epsilon": -105.598, "zeta": -140.860, "epsilon_zeta": 35.262, "bb_type": "--", "chi": -162.185, "glyco_bond": "anti", "C5prime_xyz": [ -1.465, 8.748, 0.666 ], "P_xyz": [ 1.107, 9.076, 1.053 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.786, "theta": -129.012, "eta_prime": -169.197, "theta_prime": -122.973, "eta_base": -104.529, "theta_base": -89.440, "v0": -1.930, "v1": -18.908, "v2": 31.289, "v3": -33.300, "v4": 22.232, "amplitude": 33.704, "phase_angle": 21.819, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.476, "filter_rmsd": 0.107, "frame": { "rmsd": 0.013, "origin": [ 269.042, 170.862, 258.415 ], "x_axis": [ 0.843, -0.497, 0.205 ], "y_axis": [ -0.293, -0.745, -0.599 ], "z_axis": [ 0.451, 0.445, -0.774 ], "quaternion": [ -0.285, 0.917, -0.215, 0.179 ] } }, { "index": 510, "index_chain": 510, "chain_name": "a", "nt_resnum": 511, "nt_name": "G", "nt_code": "G", "nt_id": "///a/511", "linked_nts": [ "///a/510", "///a/512" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII", "alpha": 104.467, "beta": -94.046, "gamma": -171.734, "delta": 140.101, "epsilon": -118.592, "zeta": 144.066, "epsilon_zeta": 97.342, "bb_type": "BII", "chi": -160.167, "glyco_bond": "anti", "C5prime_xyz": [ -1.968, 8.708, 0.867 ], "P_xyz": [ 0.149, 9.095, -0.614 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -141.757, "theta": 97.659, "eta_prime": -138.230, "theta_prime": 131.570, "eta_base": -101.189, "theta_base": 148.342, "v0": -22.766, "v1": 33.731, "v2": -31.390, "v3": 18.981, "v4": 2.140, "amplitude": 33.932, "phase_angle": 157.683, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 271.760, 171.111, 255.917 ], "x_axis": [ 0.324, -0.938, 0.119 ], "y_axis": [ -0.614, -0.304, -0.729 ], "z_axis": [ 0.720, 0.163, -0.675 ], "quaternion": [ -0.294, 0.759, -0.511, 0.276 ] } }, { "index": 511, "index_chain": 511, "chain_name": "a", "nt_resnum": 512, "nt_name": "C", "nt_code": "C", "nt_id": "///a/512", "linked_nts": [ "///a/511", "///a/513" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": 66.789, "beta": 145.506, "gamma": -51.713, "delta": 146.288, "epsilon": 3.260, "zeta": -66.753, "epsilon_zeta": -289.987, "bb_type": "--", "chi": -132.011, "glyco_bond": "anti", "C5prime_xyz": [ -1.565, 8.624, -0.520 ], "P_xyz": [ -0.800, 10.617, 0.984 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -105.234, "theta": 70.344, "eta_prime": -123.944, "theta_prime": 43.733, "eta_base": -147.445, "theta_base": 46.652, "v0": -18.791, "v1": 33.594, "v2": -34.612, "v3": 24.654, "v4": -3.906, "amplitude": 35.467, "phase_angle": 167.393, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.062, "frame": { "rmsd": 0.009, "origin": [ 265.285, 183.977, 254.540 ], "x_axis": [ 0.812, -0.187, 0.553 ], "y_axis": [ 0.091, -0.895, -0.436 ], "z_axis": [ 0.577, 0.404, -0.710 ], "quaternion": [ -0.227, 0.924, -0.026, 0.306 ] } }, { "index": 512, "index_chain": 512, "chain_name": "a", "nt_resnum": 513, "nt_name": "C", "nt_code": "C", "nt_id": "///a/513", "linked_nts": [ "///a/512", "///a/514" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 162.539, "beta": -173.136, "gamma": 163.446, "delta": 81.019, "epsilon": -113.944, "zeta": -79.970, "epsilon_zeta": -33.974, "bb_type": "--", "chi": -162.981, "glyco_bond": "anti", "C5prime_xyz": [ -1.452, 8.873, 0.645 ], "P_xyz": [ 0.091, 10.407, -0.797 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 129.961, "theta": -153.994, "eta_prime": 128.464, "theta_prime": -147.965, "eta_base": 126.360, "theta_base": -98.562, "v0": -3.939, "v1": -18.804, "v2": 33.018, "v3": -36.158, "v4": 25.320, "amplitude": 36.326, "phase_angle": 24.641, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.063, "frame": { "rmsd": 0.009, "origin": [ 263.735, 170.069, 254.108 ], "x_axis": [ 0.406, 0.596, 0.693 ], "y_axis": [ -0.328, 0.803, -0.498 ], "z_axis": [ -0.853, -0.025, 0.521 ], "quaternion": [ 0.826, -0.143, -0.468, 0.279 ] } }, { "index": 513, "index_chain": 513, "chain_name": "a", "nt_resnum": 514, "nt_name": "A", "nt_code": "A", "nt_id": "///a/514", "linked_nts": [ "///a/513", "///a/515" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": -73.406, "beta": 138.085, "gamma": 80.775, "delta": 82.331, "epsilon": -113.912, "zeta": -81.347, "epsilon_zeta": -32.565, "bb_type": "--", "chi": -160.555, "glyco_bond": "anti", "C5prime_xyz": [ -1.714, 8.754, 0.529 ], "P_xyz": [ 0.610, 9.183, -0.598 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.357, "theta": -95.500, "eta_prime": -173.501, "theta_prime": -105.886, "eta_base": -112.996, "theta_base": -73.003, "v0": -1.864, "v1": -20.351, "v2": 33.539, "v3": -35.498, "v4": 23.614, "amplitude": 36.043, "phase_angle": 21.483, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.351, "filter_rmsd": 0.041, "frame": { "rmsd": 0.013, "origin": [ 261.984, 172.211, 257.027 ], "x_axis": [ 0.232, 0.970, 0.074 ], "y_axis": [ -0.678, 0.216, -0.703 ], "z_axis": [ -0.698, 0.113, 0.707 ], "quaternion": [ 0.734, -0.278, -0.263, 0.561 ] } }, { "index": 514, "index_chain": 514, "chain_name": "a", "nt_resnum": 515, "nt_name": "G", "nt_code": "G", "nt_id": "///a/515", "linked_nts": [ "///a/514", "///a/516" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 103.718, "beta": -130.140, "gamma": -147.230, "delta": 79.440, "epsilon": -130.966, "zeta": -83.960, "epsilon_zeta": -47.006, "bb_type": "BI", "chi": -172.185, "glyco_bond": "anti", "C5prime_xyz": [ -1.029, 8.438, 1.229 ], "P_xyz": [ -0.350, 10.488, -0.247 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.174, "theta": -179.790, "eta_prime": -172.301, "theta_prime": -169.860, "eta_base": -106.972, "theta_base": -149.190, "v0": 7.356, "v1": -30.299, "v2": 40.665, "v3": -37.355, "v4": 18.913, "amplitude": 41.113, "phase_angle": 8.459, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 259.871, 178.114, 258.245 ], "x_axis": [ -0.342, 0.750, -0.566 ], "y_axis": [ -0.683, -0.612, -0.398 ], "z_axis": [ -0.645, 0.251, 0.722 ], "quaternion": [ 0.438, -0.370, -0.045, 0.818 ] } }, { "index": 515, "index_chain": 515, "chain_name": "a", "nt_resnum": 516, "nt_name": "C", "nt_code": "C", "nt_id": "///a/516", "linked_nts": [ "///a/515", "///a/517" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -45.811, "beta": 169.000, "gamma": 53.095, "delta": 76.683, "epsilon": -128.814, "zeta": -83.204, "epsilon_zeta": -45.610, "bb_type": "BI", "chi": -158.525, "glyco_bond": "anti", "C5prime_xyz": [ -1.677, 8.898, 0.387 ], "P_xyz": [ 0.816, 9.658, 0.457 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -177.441, "theta": -141.792, "eta_prime": -167.681, "theta_prime": -136.063, "eta_base": -145.371, "theta_base": -87.447, "v0": -3.647, "v1": -21.154, "v2": 36.496, "v3": -39.588, "v4": 27.236, "amplitude": 39.859, "phase_angle": 23.704, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.566, "filter_rmsd": 0.063, "frame": { "rmsd": 0.011, "origin": [ 258.790, 181.391, 261.303 ], "x_axis": [ -0.526, 0.372, -0.765 ], "y_axis": [ -0.509, -0.858, -0.067 ], "z_axis": [ -0.681, 0.354, 0.641 ], "quaternion": [ 0.253, -0.416, 0.083, 0.870 ] } }, { "index": 516, "index_chain": 516, "chain_name": "a", "nt_resnum": 517, "nt_name": "A", "nt_code": "A", "nt_id": "///a/517", "linked_nts": [ "///a/516", "///a/518" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -55.825, "beta": 156.147, "gamma": 54.238, "delta": 79.682, "epsilon": -157.974, "zeta": -119.533, "epsilon_zeta": -38.440, "bb_type": "BI", "chi": -159.125, "glyco_bond": "anti", "C5prime_xyz": [ -1.167, 8.606, 0.470 ], "P_xyz": [ 1.403, 8.695, 0.054 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.197, "theta": 177.636, "eta_prime": -178.727, "theta_prime": 149.845, "eta_base": -113.870, "theta_base": 105.753, "v0": 5.934, "v1": -28.590, "v2": 39.260, "v3": -36.843, "v4": 19.544, "amplitude": 39.897, "phase_angle": 10.256, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.637, "filter_rmsd": 0.040, "frame": { "rmsd": 0.015, "origin": [ 254.366, 182.792, 261.110 ], "x_axis": [ -0.563, -0.484, -0.670 ], "y_axis": [ -0.033, -0.797, 0.604 ], "z_axis": [ -0.826, 0.362, 0.432 ], "quaternion": [ -0.135, -0.448, 0.289, 0.835 ] } }, { "index": 517, "index_chain": 517, "chain_name": "a", "nt_resnum": 518, "nt_name": "G", "nt_code": "G", "nt_id": "///a/518", "linked_nts": [ "///a/517", "///a/519" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,canonical,helix,stem-end", "alpha": -169.532, "beta": -178.853, "gamma": 43.370, "delta": 82.902, "epsilon": -130.841, "zeta": -97.753, "epsilon_zeta": -33.089, "bb_type": "--", "chi": -171.142, "glyco_bond": "anti", "C5prime_xyz": [ -1.438, 8.591, 1.205 ], "P_xyz": [ 0.940, 8.859, 2.269 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 67.802, "theta": -155.506, "eta_prime": 61.947, "theta_prime": -149.820, "eta_base": 51.504, "theta_base": -135.343, "v0": 1.928, "v1": -23.892, "v2": 35.475, "v3": -35.400, "v4": 21.084, "amplitude": 36.848, "phase_angle": 15.688, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.010, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 258.991, 181.946, 274.392 ], "x_axis": [ 0.270, -0.944, -0.192 ], "y_axis": [ -0.912, -0.186, -0.366 ], "z_axis": [ 0.309, 0.274, -0.911 ], "quaternion": [ -0.208, 0.769, -0.603, 0.038 ] } }, { "index": 518, "index_chain": 518, "chain_name": "a", "nt_resnum": 519, "nt_name": "C", "nt_code": "C", "nt_id": "///a/519", "linked_nts": [ "///a/518", "///a/520" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -62.272, "beta": 146.766, "gamma": 68.491, "delta": 83.017, "epsilon": -156.013, "zeta": -81.881, "epsilon_zeta": -74.132, "bb_type": "BI", "chi": -155.760, "glyco_bond": "anti", "C5prime_xyz": [ -1.438, 8.819, 0.262 ], "P_xyz": [ 1.041, 9.028, -0.509 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.821, "theta": -117.621, "eta_prime": -178.613, "theta_prime": -129.621, "eta_base": -154.951, "theta_base": -97.775, "v0": -0.750, "v1": -21.387, "v2": 34.043, "v3": -35.412, "v4": 22.802, "amplitude": 36.167, "phase_angle": 19.730, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.275, "filter_rmsd": 0.064, "frame": { "rmsd": 0.013, "origin": [ 261.044, 183.466, 272.690 ], "x_axis": [ -0.079, -0.912, -0.403 ], "y_axis": [ -0.828, 0.285, -0.482 ], "z_axis": [ 0.555, 0.295, -0.778 ], "quaternion": [ 0.327, -0.595, 0.732, -0.064 ] } }, { "index": 519, "index_chain": 519, "chain_name": "a", "nt_resnum": 520, "nt_name": "C", "nt_code": "C", "nt_id": "///a/520", "linked_nts": [ "///a/519", "///a/521" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 167.599, "beta": -144.288, "gamma": 156.599, "delta": 79.267, "epsilon": -102.853, "zeta": -22.988, "epsilon_zeta": -79.865, "bb_type": "--", "chi": -161.630, "glyco_bond": "anti", "C5prime_xyz": [ -1.446, 8.821, 0.598 ], "P_xyz": [ 0.433, 9.620, -1.014 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.693, "theta": -90.858, "eta_prime": -175.968, "theta_prime": -89.814, "eta_base": -124.406, "theta_base": -75.967, "v0": -0.593, "v1": -22.871, "v2": 36.328, "v3": -37.643, "v4": 24.092, "amplitude": 38.524, "phase_angle": 19.438, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.211, "filter_rmsd": 0.067, "frame": { "rmsd": 0.011, "origin": [ 262.805, 181.917, 269.081 ], "x_axis": [ -0.645, -0.535, -0.546 ], "y_axis": [ -0.468, 0.841, -0.270 ], "z_axis": [ 0.604, 0.081, -0.793 ], "quaternion": [ 0.317, -0.277, 0.905, -0.052 ] } }, { "index": 520, "index_chain": 520, "chain_name": "a", "nt_resnum": 521, "nt_name": "G", "nt_code": "G", "nt_id": "///a/521", "linked_nts": [ "///a/520", "///a/522" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -105.799, "beta": 122.972, "gamma": 170.638, "delta": 78.398, "epsilon": -146.854, "zeta": -49.021, "epsilon_zeta": -97.833, "bb_type": "BI", "chi": -165.503, "glyco_bond": "anti", "C5prime_xyz": [ -1.908, 8.772, 0.782 ], "P_xyz": [ -2.262, 10.896, -0.714 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -151.170, "theta": 177.297, "eta_prime": -124.256, "theta_prime": 179.451, "eta_base": -79.987, "theta_base": -165.934, "v0": -1.743, "v1": -22.788, "v2": 37.133, "v3": -39.152, "v4": 25.750, "amplitude": 39.773, "phase_angle": 20.994, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 258.869, 180.750, 261.654 ], "x_axis": [ -0.524, 0.270, -0.808 ], "y_axis": [ 0.329, 0.939, 0.101 ], "z_axis": [ 0.786, -0.213, -0.581 ], "quaternion": [ 0.457, 0.172, 0.872, -0.032 ] } }, { "index": 521, "index_chain": 521, "chain_name": "a", "nt_resnum": 522, "nt_name": "C", "nt_code": "C", "nt_id": "///a/522", "linked_nts": [ "///a/521", "///a/523" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -149.859, "beta": 131.919, "gamma": 150.999, "delta": 80.396, "epsilon": -127.819, "zeta": -52.409, "epsilon_zeta": -75.410, "bb_type": "--", "chi": -167.186, "glyco_bond": "anti", "C5prime_xyz": [ -1.225, 8.656, 0.981 ], "P_xyz": [ -0.459, 10.536, -0.658 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.661, "theta": -144.999, "eta_prime": 172.365, "theta_prime": -138.828, "eta_base": -166.071, "theta_base": -90.686, "v0": 3.544, "v1": -26.247, "v2": 37.809, "v3": -36.712, "v4": 20.854, "amplitude": 38.872, "phase_angle": 13.425, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1f", "suiteness": 0.010, "filter_rmsd": 0.068, "frame": { "rmsd": 0.014, "origin": [ 259.883, 177.638, 259.142 ], "x_axis": [ -0.437, 0.589, -0.680 ], "y_axis": [ 0.636, 0.737, 0.230 ], "z_axis": [ 0.636, -0.332, -0.697 ], "quaternion": [ 0.388, 0.361, 0.847, -0.030 ] } }, { "index": 522, "index_chain": 522, "chain_name": "a", "nt_resnum": 523, "nt_name": "G", "nt_code": "G", "nt_id": "///a/523", "linked_nts": [ "///a/522", "///a/524" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": -90.037, "beta": -163.896, "gamma": 56.153, "delta": 79.479, "epsilon": -118.579, "zeta": -94.229, "epsilon_zeta": -24.350, "bb_type": "--", "chi": -144.074, "glyco_bond": "anti", "C5prime_xyz": [ -1.429, 8.806, -0.465 ], "P_xyz": [ 1.082, 9.516, -0.424 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.656, "theta": -147.512, "eta_prime": 179.685, "theta_prime": -130.848, "eta_base": -121.161, "theta_base": -97.308, "v0": -0.009, "v1": -23.094, "v2": 36.058, "v3": -37.108, "v4": 23.419, "amplitude": 38.055, "phase_angle": 18.644, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.322, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 260.273, 180.030, 254.556 ], "x_axis": [ 0.057, 0.986, 0.158 ], "y_axis": [ 0.880, -0.124, 0.459 ], "z_axis": [ 0.472, 0.113, -0.875 ], "quaternion": [ 0.121, 0.717, 0.651, 0.220 ] } }, { "index": 523, "index_chain": 523, "chain_name": "a", "nt_resnum": 524, "nt_name": "G", "nt_code": "G", "nt_id": "///a/524", "linked_nts": [ "///a/523", "///a/525" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -52.895, "beta": -164.266, "gamma": 70.910, "delta": 83.043, "epsilon": 176.288, "zeta": 145.418, "epsilon_zeta": 30.870, "bb_type": "--", "chi": -90.788, "glyco_bond": "anti", "C5prime_xyz": [ -2.465, 7.343, -2.965 ], "P_xyz": [ -0.366, 7.071, -4.495 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -151.520, "theta": 51.548, "eta_prime": -143.377, "theta_prime": 58.121, "eta_base": -130.889, "theta_base": 74.977, "v0": 1.273, "v1": -22.698, "v2": 34.270, "v3": -34.470, "v4": 20.971, "amplitude": 35.763, "phase_angle": 16.613, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.195, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 267.203, 184.510, 251.195 ], "x_axis": [ 0.609, 0.579, 0.542 ], "y_axis": [ 0.653, -0.754, 0.072 ], "z_axis": [ 0.451, 0.310, -0.837 ], "quaternion": [ -0.066, 0.894, 0.344, 0.278 ] } }, { "index": 524, "index_chain": 524, "chain_name": "a", "nt_resnum": 525, "nt_name": "U", "nt_code": "U", "nt_id": "///a/525", "linked_nts": [ "///a/524", "///a/526" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -62.692, "beta": 151.152, "gamma": 62.648, "delta": 136.087, "epsilon": -117.231, "zeta": 93.537, "epsilon_zeta": 149.231, "bb_type": "--", "chi": -121.786, "glyco_bond": "anti", "C5prime_xyz": [ -1.711, 8.513, -1.291 ], "P_xyz": [ 0.884, 8.635, -1.436 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -160.403, "theta": 143.752, "eta_prime": -138.595, "theta_prime": 128.261, "eta_base": -145.384, "theta_base": 152.678, "v0": -20.935, "v1": 30.294, "v2": -27.769, "v3": 16.425, "v4": 2.653, "amplitude": 30.319, "phase_angle": 156.333, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "3b", "suiteness": 0.010, "filter_rmsd": 0.105, "frame": { "rmsd": 0.005, "origin": [ 269.199, 168.672, 248.459 ], "x_axis": [ -0.350, 0.454, -0.820 ], "y_axis": [ 0.594, 0.784, 0.181 ], "z_axis": [ 0.725, -0.423, -0.544 ], "quaternion": [ 0.472, 0.320, 0.818, -0.074 ] } }, { "index": 525, "index_chain": 525, "chain_name": "a", "nt_resnum": 526, "nt_name": "A", "nt_code": "A", "nt_id": "///a/526", "linked_nts": [ "///a/525", "///a/527" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": 31.478, "beta": 59.589, "gamma": 161.973, "delta": 82.642, "epsilon": 170.783, "zeta": 37.309, "epsilon_zeta": 133.474, "bb_type": "--", "chi": -109.194, "glyco_bond": "anti", "C5prime_xyz": [ -2.487, 8.080, -2.258 ], "P_xyz": [ -4.234, 7.027, -3.944 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 24.789, "theta": -123.289, "eta_prime": -29.042, "theta_prime": -134.994, "eta_base": -53.673, "theta_base": -150.908, "v0": -7.423, "v1": -13.662, "v2": 27.966, "v3": -33.176, "v4": 25.724, "amplitude": 32.786, "phase_angle": 31.460, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.034, "frame": { "rmsd": 0.010, "origin": [ 282.258, 169.974, 260.746 ], "x_axis": [ 0.268, 0.708, 0.654 ], "y_axis": [ -0.821, 0.523, -0.229 ], "z_axis": [ -0.504, -0.475, 0.721 ], "quaternion": [ 0.792, 0.078, -0.365, 0.482 ] } }, { "index": 526, "index_chain": 526, "chain_name": "a", "nt_resnum": 527, "nt_name": "A", "nt_code": "A", "nt_id": "///a/527", "linked_nts": [ "///a/526", "///a/528" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": 87.333, "beta": 113.244, "gamma": 17.463, "delta": 143.859, "epsilon": -104.030, "zeta": -135.569, "epsilon_zeta": 31.540, "bb_type": "--", "chi": -93.649, "glyco_bond": "anti", "C5prime_xyz": [ -2.580, 7.824, -2.413 ], "P_xyz": [ -0.089, 8.532, -1.996 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -91.235, "theta": -87.277, "eta_prime": -9.519, "theta_prime": -140.989, "eta_base": 5.180, "theta_base": -174.823, "v0": -23.219, "v1": 35.918, "v2": -34.171, "v3": 21.627, "v4": 0.799, "amplitude": 36.367, "phase_angle": 159.985, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.012, "origin": [ 264.164, 173.646, 258.691 ], "x_axis": [ -0.194, -0.667, -0.720 ], "y_axis": [ 0.913, -0.392, 0.117 ], "z_axis": [ -0.360, -0.634, 0.685 ], "quaternion": [ 0.524, 0.358, 0.172, -0.753 ] } }, { "index": 527, "index_chain": 527, "chain_name": "a", "nt_resnum": 528, "nt_name": "U", "nt_code": "U", "nt_id": "///a/528", "linked_nts": [ "///a/527", "///a/529" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": 60.423, "beta": -175.291, "gamma": 61.860, "delta": 79.925, "epsilon": -105.753, "zeta": -96.991, "epsilon_zeta": -8.761, "bb_type": "--", "chi": -146.778, "glyco_bond": "anti", "C5prime_xyz": [ -1.911, 8.827, -0.311 ], "P_xyz": [ 0.529, 9.739, -0.530 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -37.144, "theta": -141.997, "eta_prime": -9.930, "theta_prime": -121.404, "eta_base": 23.004, "theta_base": -99.572, "v0": -3.011, "v1": -20.287, "v2": 34.410, "v3": -37.111, "v4": 25.329, "amplitude": 37.409, "phase_angle": 23.096, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "8d", "suiteness": 0.607, "filter_rmsd": 0.100, "frame": { "rmsd": 0.007, "origin": [ 272.552, 175.889, 273.809 ], "x_axis": [ 0.398, 0.878, -0.265 ], "y_axis": [ -0.056, -0.265, -0.963 ], "z_axis": [ -0.916, 0.398, -0.056 ], "quaternion": [ 0.519, -0.655, -0.314, 0.450 ] } }, { "index": 528, "index_chain": 528, "chain_name": "a", "nt_resnum": 529, "nt_name": "A", "nt_code": "A", "nt_id": "///a/529", "linked_nts": [ "///a/528", "///a/530" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -54.607, "beta": -150.397, "gamma": 64.604, "delta": 144.797, "epsilon": -97.361, "zeta": -85.793, "epsilon_zeta": -11.568, "bb_type": "--", "chi": -132.752, "glyco_bond": "anti", "C5prime_xyz": [ -1.701, 8.696, -0.568 ], "P_xyz": [ 0.264, 9.491, 0.958 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -128.300, "theta": -62.553, "eta_prime": -120.629, "theta_prime": -80.825, "eta_base": -121.151, "theta_base": -47.423, "v0": -22.318, "v1": 35.513, "v2": -34.567, "v3": 22.587, "v4": -0.396, "amplitude": 36.374, "phase_angle": 161.863, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1[", "suiteness": 0.230, "filter_rmsd": 0.042, "frame": { "rmsd": 0.013, "origin": [ 265.423, 181.916, 266.082 ], "x_axis": [ 0.972, 0.235, -0.010 ], "y_axis": [ 0.235, -0.970, 0.061 ], "z_axis": [ 0.005, -0.062, -0.998 ], "quaternion": [ 0.031, 0.992, 0.119, -0.001 ] } }, { "index": 529, "index_chain": 529, "chain_name": "a", "nt_resnum": 530, "nt_name": "C", "nt_code": "C", "nt_id": "///a/530", "linked_nts": [ "///a/529", "///a/531" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -84.612, "beta": -169.273, "gamma": 51.292, "delta": 83.559, "epsilon": -127.042, "zeta": -80.036, "epsilon_zeta": -47.006, "bb_type": "--", "chi": -167.369, "glyco_bond": "anti", "C5prime_xyz": [ -1.104, 8.625, 1.007 ], "P_xyz": [ 1.330, 8.705, 1.962 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.882, "theta": -132.288, "eta_prime": -170.984, "theta_prime": -127.036, "eta_base": -145.800, "theta_base": -98.024, "v0": 3.382, "v1": -24.712, "v2": 35.552, "v3": -34.517, "v4": 19.625, "amplitude": 36.545, "phase_angle": 13.390, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.752, "filter_rmsd": 0.075, "frame": { "rmsd": 0.017, "origin": [ 266.117, 168.864, 259.159 ], "x_axis": [ 0.758, 0.098, 0.644 ], "y_axis": [ -0.565, 0.591, 0.576 ], "z_axis": [ -0.324, -0.801, 0.503 ], "quaternion": [ 0.844, 0.408, -0.287, 0.196 ] } }, { "index": 530, "index_chain": 530, "chain_name": "a", "nt_resnum": 531, "nt_name": "G", "nt_code": "G", "nt_id": "///a/531", "linked_nts": [ "///a/530", "///a/532" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -53.695, "beta": 174.174, "gamma": 41.352, "delta": 79.655, "epsilon": -157.387, "zeta": -75.125, "epsilon_zeta": -82.262, "bb_type": "BI", "chi": -170.363, "glyco_bond": "anti", "C5prime_xyz": [ -1.371, 8.673, 1.081 ], "P_xyz": [ 1.068, 9.071, 1.927 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.761, "theta": -125.552, "eta_prime": 178.489, "theta_prime": -131.886, "eta_base": -138.287, "theta_base": -105.022, "v0": 0.822, "v1": -23.915, "v2": 36.593, "v3": -37.029, "v4": 22.802, "amplitude": 38.329, "phase_angle": 17.307, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.557, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 266.357, 164.844, 262.342 ], "x_axis": [ 0.385, 0.742, 0.549 ], "y_axis": [ -0.860, 0.504, -0.077 ], "z_axis": [ -0.334, -0.443, 0.832 ], "quaternion": [ 0.825, 0.111, -0.268, 0.485 ] } }, { "index": 531, "index_chain": 531, "chain_name": "a", "nt_resnum": 532, "nt_name": "A", "nt_code": "A", "nt_id": "///a/532", "linked_nts": [ "///a/531", "///a/533" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 158.028, "beta": -159.368, "gamma": 175.218, "delta": 83.693, "epsilon": -138.347, "zeta": -68.602, "epsilon_zeta": -69.745, "bb_type": "BI", "chi": -179.107, "glyco_bond": "anti", "C5prime_xyz": [ -1.338, 8.377, 1.637 ], "P_xyz": [ 0.414, 10.040, 0.667 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.978, "theta": -157.115, "eta_prime": -176.105, "theta_prime": -153.553, "eta_base": -129.242, "theta_base": -121.342, "v0": 2.139, "v1": -23.314, "v2": 34.446, "v3": -34.165, "v4": 20.286, "amplitude": 35.712, "phase_angle": 15.298, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.924, "filter_rmsd": 0.044, "frame": { "rmsd": 0.016, "origin": [ 267.841, 163.915, 265.781 ], "x_axis": [ -0.143, 0.904, 0.403 ], "y_axis": [ -0.962, -0.031, -0.271 ], "z_axis": [ -0.233, -0.426, 0.874 ], "quaternion": [ 0.652, 0.059, -0.244, 0.715 ] } }, { "index": 532, "index_chain": 532, "chain_name": "a", "nt_resnum": 533, "nt_name": "A", "nt_code": "A", "nt_id": "///a/533", "linked_nts": [ "///a/532", "///a/534" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -65.117, "beta": 178.143, "gamma": 46.154, "delta": 80.433, "epsilon": -169.320, "zeta": -90.804, "epsilon_zeta": -78.516, "bb_type": "BI", "chi": -158.579, "glyco_bond": "anti", "C5prime_xyz": [ -1.521, 8.747, 0.417 ], "P_xyz": [ 0.946, 9.401, 0.940 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.591, "theta": -143.385, "eta_prime": 179.571, "theta_prime": -147.579, "eta_base": -133.231, "theta_base": -117.893, "v0": -1.248, "v1": -21.414, "v2": 34.598, "v3": -36.369, "v4": 23.734, "amplitude": 36.952, "phase_angle": 20.559, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.863, "filter_rmsd": 0.039, "frame": { "rmsd": 0.011, "origin": [ 268.460, 163.830, 269.288 ], "x_axis": [ -0.685, 0.724, 0.073 ], "y_axis": [ -0.689, -0.613, -0.386 ], "z_axis": [ -0.235, -0.315, 0.920 ], "quaternion": [ 0.394, -0.045, -0.196, 0.897 ] } }, { "index": 533, "index_chain": 533, "chain_name": "a", "nt_resnum": 534, "nt_name": "G", "nt_code": "G", "nt_id": "///a/534", "linked_nts": [ "///a/533", "///a/535" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 166.389, "beta": -141.234, "gamma": 151.596, "delta": 79.980, "epsilon": -128.574, "zeta": -69.506, "epsilon_zeta": -59.068, "bb_type": "BI", "chi": -169.481, "glyco_bond": "anti", "C5prime_xyz": [ -1.145, 8.586, 1.084 ], "P_xyz": [ 0.948, 9.225, -0.323 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.611, "theta": -135.013, "eta_prime": 172.913, "theta_prime": -138.571, "eta_base": -141.508, "theta_base": -103.811, "v0": 3.587, "v1": -26.192, "v2": 37.763, "v3": -36.700, "v4": 20.879, "amplitude": 38.828, "phase_angle": 13.453, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.055, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 268.034, 164.236, 272.299 ], "x_axis": [ -0.953, 0.278, -0.123 ], "y_axis": [ -0.256, -0.951, -0.173 ], "z_axis": [ -0.166, -0.134, 0.977 ], "quaternion": [ 0.136, -0.073, -0.078, 0.985 ] } }, { "index": 534, "index_chain": 534, "chain_name": "a", "nt_resnum": 535, "nt_name": "G", "nt_code": "G", "nt_id": "///a/535", "linked_nts": [ "///a/534", "///a/536" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -62.893, "beta": 159.674, "gamma": 60.732, "delta": 74.660, "epsilon": -143.896, "zeta": -71.308, "epsilon_zeta": -72.588, "bb_type": "BI", "chi": -167.585, "glyco_bond": "anti", "C5prime_xyz": [ -1.609, 8.743, 0.924 ], "P_xyz": [ 0.865, 9.432, 0.651 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.843, "theta": -145.340, "eta_prime": -177.334, "theta_prime": -143.942, "eta_base": -117.931, "theta_base": -105.872, "v0": 0.414, "v1": -25.794, "v2": 40.130, "v3": -40.940, "v4": 25.588, "amplitude": 42.214, "phase_angle": 18.080, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.661, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 265.162, 165.208, 274.913 ], "x_axis": [ -0.873, -0.390, -0.292 ], "y_axis": [ 0.390, -0.919, 0.063 ], "z_axis": [ -0.293, -0.059, 0.954 ], "quaternion": [ -0.201, -0.151, 0.001, 0.968 ] } }, { "index": 535, "index_chain": 535, "chain_name": "a", "nt_resnum": 536, "nt_name": "G", "nt_code": "G", "nt_id": "///a/536", "linked_nts": [ "///a/535", "///a/537" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -66.504, "beta": 168.647, "gamma": 61.671, "delta": 80.489, "epsilon": -153.582, "zeta": -83.037, "epsilon_zeta": -70.545, "bb_type": "BI", "chi": -168.495, "glyco_bond": "anti", "C5prime_xyz": [ -1.338, 8.633, 1.046 ], "P_xyz": [ 1.232, 8.998, 1.169 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.056, "theta": -157.750, "eta_prime": -174.473, "theta_prime": -158.185, "eta_base": -119.180, "theta_base": -151.737, "v0": 2.484, "v1": -25.175, "v2": 37.007, "v3": -36.586, "v4": 21.578, "amplitude": 38.311, "phase_angle": 14.994, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.790, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 261.938, 164.860, 277.211 ], "x_axis": [ -0.329, -0.883, -0.334 ], "y_axis": [ 0.854, -0.429, 0.295 ], "z_axis": [ -0.404, -0.188, 0.895 ], "quaternion": [ 0.533, 0.226, -0.033, -0.814 ] } }, { "index": 536, "index_chain": 536, "chain_name": "a", "nt_resnum": 537, "nt_name": "U", "nt_code": "U", "nt_id": "///a/537", "linked_nts": [ "///a/536", "///a/538" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -55.810, "beta": 165.056, "gamma": 58.043, "delta": 80.994, "epsilon": -164.482, "zeta": -83.783, "epsilon_zeta": -80.699, "bb_type": "BI", "chi": -160.617, "glyco_bond": "anti", "C5prime_xyz": [ -1.462, 8.767, 0.538 ], "P_xyz": [ 1.101, 9.231, 0.583 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.819, "theta": -130.721, "eta_prime": -172.813, "theta_prime": -138.307, "eta_base": -155.053, "theta_base": -110.946, "v0": -0.997, "v1": -21.780, "v2": 35.053, "v3": -36.541, "v4": 23.679, "amplitude": 37.322, "phase_angle": 20.080, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.821, "filter_rmsd": 0.107, "frame": { "rmsd": 0.015, "origin": [ 259.217, 166.253, 279.499 ], "x_axis": [ -0.063, -0.988, -0.143 ], "y_axis": [ 0.866, -0.125, 0.484 ], "z_axis": [ -0.496, -0.093, 0.863 ], "quaternion": [ 0.647, 0.223, -0.136, -0.716 ] } }, { "index": 537, "index_chain": 537, "chain_name": "a", "nt_resnum": 538, "nt_name": "G", "nt_code": "G", "nt_id": "///a/538", "linked_nts": [ "///a/537", "///a/539" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 162.893, "beta": -146.551, "gamma": 162.253, "delta": 79.639, "epsilon": -97.560, "zeta": -114.485, "epsilon_zeta": 16.925, "bb_type": "--", "chi": -173.384, "glyco_bond": "anti", "C5prime_xyz": [ -1.206, 8.539, 1.332 ], "P_xyz": [ 0.813, 9.631, 0.137 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.651, "theta": -129.431, "eta_prime": -176.347, "theta_prime": -136.761, "eta_base": -133.001, "theta_base": -116.091, "v0": 2.584, "v1": -24.944, "v2": 36.718, "v3": -36.197, "v4": 21.195, "amplitude": 37.979, "phase_angle": 14.804, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.429, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 256.211, 164.494, 281.941 ], "x_axis": [ 0.456, -0.875, 0.160 ], "y_axis": [ 0.721, 0.469, 0.511 ], "z_axis": [ -0.522, -0.118, 0.845 ], "quaternion": [ 0.832, 0.189, -0.205, -0.479 ] } }, { "index": 538, "index_chain": 538, "chain_name": "a", "nt_resnum": 539, "nt_name": "C", "nt_code": "C", "nt_id": "///a/539", "linked_nts": [ "///a/538", "///a/540" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 93.847, "beta": -110.720, "gamma": -149.455, "delta": 81.010, "epsilon": -130.191, "zeta": -20.159, "epsilon_zeta": -110.032, "bb_type": "--", "chi": -157.849, "glyco_bond": "anti", "C5prime_xyz": [ -1.377, 8.746, 0.423 ], "P_xyz": [ -1.134, 10.075, -1.797 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.745, "theta": -134.635, "eta_prime": -176.352, "theta_prime": -147.619, "eta_base": -138.259, "theta_base": -86.886, "v0": 2.849, "v1": -25.359, "v2": 37.076, "v3": -36.393, "v4": 21.141, "amplitude": 38.281, "phase_angle": 14.413, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.068, "frame": { "rmsd": 0.013, "origin": [ 254.800, 162.136, 283.181 ], "x_axis": [ 0.602, -0.703, 0.378 ], "y_axis": [ 0.264, 0.622, 0.737 ], "z_axis": [ -0.753, -0.344, 0.560 ], "quaternion": [ 0.834, 0.324, -0.339, -0.290 ] } }, { "index": 539, "index_chain": 539, "chain_name": "a", "nt_resnum": 540, "nt_name": "A", "nt_code": "A", "nt_id": "///a/540", "linked_nts": [ "///a/539", "///a/541" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BI", "alpha": -152.274, "beta": 107.184, "gamma": 166.467, "delta": 83.870, "epsilon": -138.622, "zeta": -70.929, "epsilon_zeta": -67.693, "bb_type": "BI", "chi": 19.814, "glyco_bond": "syn", "C5prime_xyz": [ -5.569, 3.898, -0.478 ], "P_xyz": [ -7.384, 3.894, 1.369 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.948, "theta": 141.016, "eta_prime": 178.249, "theta_prime": 148.581, "eta_base": -99.569, "theta_base": 121.143, "v0": -3.265, "v1": -18.557, "v2": 31.878, "v3": -34.719, "v4": 24.012, "amplitude": 34.863, "phase_angle": 23.881, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.019, "origin": [ 256.542, 160.169, 288.557 ], "x_axis": [ 0.227, -0.752, -0.619 ], "y_axis": [ -0.856, 0.149, -0.495 ], "z_axis": [ 0.464, 0.642, -0.610 ], "quaternion": [ -0.438, 0.649, -0.619, -0.060 ] } }, { "index": 540, "index_chain": 540, "chain_name": "a", "nt_resnum": 541, "nt_name": "A", "nt_code": "A", "nt_id": "///a/541", "linked_nts": [ "///a/540", "///a/542" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": -107.890, "beta": 89.822, "gamma": -170.404, "delta": 144.871, "epsilon": -90.548, "zeta": 117.328, "epsilon_zeta": 152.124, "bb_type": "--", "chi": -113.934, "glyco_bond": "anti", "C5prime_xyz": [ -2.188, 8.422, -1.570 ], "P_xyz": [ -3.181, 9.218, -3.846 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -92.845, "theta": 89.559, "eta_prime": -117.666, "theta_prime": 101.580, "eta_base": -160.097, "theta_base": 129.159, "v0": -25.669, "v1": 38.182, "v2": -35.385, "v3": 21.478, "v4": 2.417, "amplitude": 38.261, "phase_angle": 157.643, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.042, "frame": { "rmsd": 0.012, "origin": [ 247.744, 156.610, 282.251 ], "x_axis": [ 0.334, -0.929, 0.158 ], "y_axis": [ -0.180, 0.102, 0.978 ], "z_axis": [ -0.925, -0.355, -0.133 ], "quaternion": [ 0.571, 0.584, -0.474, -0.328 ] } }, { "index": 541, "index_chain": 541, "chain_name": "a", "nt_resnum": 542, "nt_name": "G", "nt_code": "G", "nt_id": "///a/542", "linked_nts": [ "///a/541", "///a/543" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 57.560, "beta": -100.369, "gamma": -139.578, "delta": 88.722, "epsilon": -145.133, "zeta": -65.366, "epsilon_zeta": -79.768, "bb_type": "BI", "chi": -174.089, "glyco_bond": "anti", "C5prime_xyz": [ -1.049, 8.392, 1.411 ], "P_xyz": [ -0.513, 10.311, -0.306 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -124.063, "theta": 176.266, "eta_prime": -140.342, "theta_prime": -168.676, "eta_base": -111.529, "theta_base": -131.046, "v0": 5.423, "v1": -24.243, "v2": 32.714, "v3": -30.498, "v4": 15.880, "amplitude": 33.161, "phase_angle": 9.425, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.024, "frame": { "rmsd": 0.024, "origin": [ 244.739, 162.927, 278.870 ], "x_axis": [ -0.984, 0.094, -0.150 ], "y_axis": [ -0.150, 0.013, 0.989 ], "z_axis": [ 0.095, 0.995, 0.001 ], "quaternion": [ 0.087, -0.020, 0.706, 0.702 ] } }, { "index": 542, "index_chain": 542, "chain_name": "a", "nt_resnum": 543, "nt_name": "C", "nt_code": "C", "nt_id": "///a/543", "linked_nts": [ "///a/542", "///a/544" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -94.618, "beta": 169.628, "gamma": 86.705, "delta": 83.358, "epsilon": -147.243, "zeta": -86.037, "epsilon_zeta": -61.206, "bb_type": "BI", "chi": -157.426, "glyco_bond": "anti", "C5prime_xyz": [ -1.335, 8.778, 0.347 ], "P_xyz": [ 1.115, 9.152, -0.502 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.905, "theta": -119.212, "eta_prime": -170.777, "theta_prime": -134.572, "eta_base": -121.556, "theta_base": -111.413, "v0": 0.298, "v1": -22.477, "v2": 34.840, "v3": -35.526, "v4": 22.210, "amplitude": 36.645, "phase_angle": 18.058, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.068, "frame": { "rmsd": 0.015, "origin": [ 244.077, 166.420, 277.529 ], "x_axis": [ -0.821, 0.339, 0.459 ], "y_axis": [ 0.515, 0.092, 0.852 ], "z_axis": [ 0.246, 0.936, -0.250 ], "quaternion": [ -0.072, 0.290, 0.735, 0.608 ] } }, { "index": 543, "index_chain": 543, "chain_name": "a", "nt_resnum": 544, "nt_name": "G", "nt_code": "G", "nt_id": "///a/544", "linked_nts": [ "///a/543", "///a/545" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 142.601, "beta": -148.661, "gamma": 178.620, "delta": 80.479, "epsilon": -118.862, "zeta": -84.721, "epsilon_zeta": -34.141, "bb_type": "--", "chi": -173.361, "glyco_bond": "anti", "C5prime_xyz": [ -1.402, 8.580, 1.280 ], "P_xyz": [ 0.130, 10.164, -0.139 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.971, "theta": -162.691, "eta_prime": 174.603, "theta_prime": -160.990, "eta_base": -138.743, "theta_base": -140.899, "v0": 2.529, "v1": -25.138, "v2": 36.951, "v3": -36.431, "v4": 21.412, "amplitude": 38.230, "phase_angle": 14.861, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.616, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 242.414, 169.516, 276.702 ], "x_axis": [ -0.473, 0.132, 0.871 ], "y_axis": [ 0.881, 0.078, 0.467 ], "z_axis": [ -0.006, 0.988, -0.153 ], "quaternion": [ -0.336, 0.388, 0.653, 0.557 ] } }, { "index": 544, "index_chain": 544, "chain_name": "a", "nt_resnum": 545, "nt_name": "U", "nt_code": "U", "nt_id": "///a/545", "linked_nts": [ "///a/544", "///a/546" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -87.185, "beta": 146.692, "gamma": 87.350, "delta": 79.696, "epsilon": -131.832, "zeta": -78.402, "epsilon_zeta": -53.430, "bb_type": "BI", "chi": -146.923, "glyco_bond": "anti", "C5prime_xyz": [ -1.744, 8.760, -0.269 ], "P_xyz": [ 0.252, 9.135, -1.901 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.956, "theta": -141.687, "eta_prime": 176.456, "theta_prime": -144.579, "eta_base": -153.129, "theta_base": -116.839, "v0": 0.016, "v1": -23.282, "v2": 36.367, "v3": -37.366, "v4": 23.546, "amplitude": 38.365, "phase_angle": 18.576, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.104, "frame": { "rmsd": 0.015, "origin": [ 241.073, 171.379, 276.289 ], "x_axis": [ -0.081, 0.184, 0.980 ], "y_axis": [ 0.873, 0.487, -0.019 ], "z_axis": [ -0.481, 0.854, -0.200 ], "quaternion": [ 0.549, -0.397, -0.665, -0.314 ] } }, { "index": 545, "index_chain": 545, "chain_name": "a", "nt_resnum": 546, "nt_name": "U", "nt_code": "U", "nt_id": "///a/546", "linked_nts": [ "///a/545", "///a/547" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -67.978, "beta": 164.033, "gamma": 62.422, "delta": 78.776, "epsilon": -137.994, "zeta": -80.348, "epsilon_zeta": -57.646, "bb_type": "BI", "chi": -152.432, "glyco_bond": "anti", "C5prime_xyz": [ -1.793, 8.756, 0.049 ], "P_xyz": [ 0.664, 9.362, -0.510 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.314, "theta": -142.820, "eta_prime": -179.814, "theta_prime": -142.162, "eta_base": -137.583, "theta_base": -112.588, "v0": -0.877, "v1": -23.171, "v2": 37.114, "v3": -38.585, "v4": 24.901, "amplitude": 39.453, "phase_angle": 19.830, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.734, "filter_rmsd": 0.102, "frame": { "rmsd": 0.016, "origin": [ 239.339, 175.142, 278.063 ], "x_axis": [ 0.605, 0.065, 0.794 ], "y_axis": [ 0.721, 0.377, -0.581 ], "z_axis": [ -0.337, 0.924, 0.181 ], "quaternion": [ 0.735, -0.512, -0.384, -0.223 ] } }, { "index": 546, "index_chain": 546, "chain_name": "a", "nt_resnum": 547, "nt_name": "A", "nt_code": "A", "nt_id": "///a/547", "linked_nts": [ "///a/546", "///a/548" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -53.724, "beta": 164.924, "gamma": 51.215, "delta": 80.172, "epsilon": -135.132, "zeta": -76.134, "epsilon_zeta": -58.998, "bb_type": "BI", "chi": -159.497, "glyco_bond": "anti", "C5prime_xyz": [ -1.673, 8.759, 0.466 ], "P_xyz": [ 0.855, 9.365, 0.601 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.518, "theta": -137.162, "eta_prime": -176.048, "theta_prime": -136.024, "eta_base": -134.526, "theta_base": -106.259, "v0": -3.800, "v1": -19.837, "v2": 34.648, "v3": -37.711, "v4": 26.257, "amplitude": 37.987, "phase_angle": 24.203, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.809, "filter_rmsd": 0.041, "frame": { "rmsd": 0.017, "origin": [ 239.249, 178.602, 280.743 ], "x_axis": [ 0.976, -0.107, 0.189 ], "y_axis": [ 0.212, 0.281, -0.936 ], "z_axis": [ 0.047, 0.954, 0.297 ], "quaternion": [ 0.799, -0.591, -0.044, -0.100 ] } }, { "index": 547, "index_chain": 547, "chain_name": "a", "nt_resnum": 548, "nt_name": "A", "nt_code": "A", "nt_id": "///a/548", "linked_nts": [ "///a/547", "///a/549" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -57.338, "beta": 164.315, "gamma": 50.280, "delta": 74.121, "epsilon": -147.508, "zeta": -77.498, "epsilon_zeta": -70.011, "bb_type": "BI", "chi": -144.724, "glyco_bond": "anti", "C5prime_xyz": [ -1.948, 8.779, -0.435 ], "P_xyz": [ 0.421, 9.647, -1.060 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.967, "theta": -156.594, "eta_prime": 177.197, "theta_prime": -160.315, "eta_base": -138.246, "theta_base": -159.605, "v0": -0.919, "v1": -24.346, "v2": 39.096, "v3": -40.686, "v4": 26.202, "amplitude": 41.568, "phase_angle": 19.859, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.770, "filter_rmsd": 0.041, "frame": { "rmsd": 0.015, "origin": [ 240.997, 180.983, 282.725 ], "x_axis": [ 0.929, -0.032, -0.369 ], "y_axis": [ -0.299, 0.524, -0.798 ], "z_axis": [ 0.219, 0.851, 0.477 ], "quaternion": [ 0.856, -0.482, 0.172, 0.078 ] } }, { "index": 548, "index_chain": 548, "chain_name": "a", "nt_resnum": 549, "nt_name": "U", "nt_code": "U", "nt_id": "///a/549", "linked_nts": [ "///a/548", "///a/550" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -123.725, "beta": 159.127, "gamma": 111.561, "delta": 81.117, "epsilon": -121.796, "zeta": -99.861, "epsilon_zeta": -21.935, "bb_type": "--", "chi": -158.669, "glyco_bond": "anti", "C5prime_xyz": [ -1.468, 8.742, 0.423 ], "P_xyz": [ 0.425, 9.605, -1.143 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.355, "theta": -157.680, "eta_prime": 168.031, "theta_prime": -155.032, "eta_base": 175.776, "theta_base": -124.879, "v0": 0.601, "v1": -23.265, "v2": 35.703, "v3": -36.368, "v4": 22.596, "amplitude": 37.480, "phase_angle": 17.714, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.109, "frame": { "rmsd": 0.013, "origin": [ 241.972, 183.364, 285.784 ], "x_axis": [ 0.667, -0.270, -0.694 ], "y_axis": [ -0.418, 0.636, -0.649 ], "z_axis": [ 0.617, 0.723, 0.312 ], "quaternion": [ 0.809, -0.424, 0.405, 0.046 ] } }, { "index": 549, "index_chain": 549, "chain_name": "a", "nt_resnum": 550, "nt_name": "C", "nt_code": "C", "nt_id": "///a/550", "linked_nts": [ "///a/549", "///a/551" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -45.940, "beta": 144.390, "gamma": 52.457, "delta": 77.621, "epsilon": -159.267, "zeta": -82.776, "epsilon_zeta": -76.491, "bb_type": "BI", "chi": -161.059, "glyco_bond": "anti", "C5prime_xyz": [ -1.492, 8.787, 0.592 ], "P_xyz": [ 1.056, 9.010, 0.115 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.936, "theta": -122.802, "eta_prime": 179.754, "theta_prime": -130.819, "eta_base": -135.610, "theta_base": -103.503, "v0": -0.335, "v1": -23.926, "v2": 37.904, "v3": -38.999, "v4": 24.817, "amplitude": 40.094, "phase_angle": 19.025, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.745, "filter_rmsd": 0.068, "frame": { "rmsd": 0.018, "origin": [ 245.783, 185.886, 285.938 ], "x_axis": [ 0.158, -0.028, -0.987 ], "y_axis": [ -0.715, 0.687, -0.133 ], "z_axis": [ 0.682, 0.726, 0.089 ], "quaternion": [ 0.695, -0.309, 0.600, 0.247 ] } }, { "index": 550, "index_chain": 550, "chain_name": "a", "nt_resnum": 551, "nt_name": "G", "nt_code": "G", "nt_id": "///a/551", "linked_nts": [ "///a/550", "///a/552" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 173.640, "beta": -142.702, "gamma": 159.581, "delta": 80.240, "epsilon": -101.750, "zeta": -98.920, "epsilon_zeta": -2.830, "bb_type": "--", "chi": -170.134, "glyco_bond": "anti", "C5prime_xyz": [ -1.615, 8.776, 1.085 ], "P_xyz": [ 0.475, 9.793, -0.068 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.487, "theta": -137.832, "eta_prime": -169.489, "theta_prime": -134.501, "eta_base": -124.919, "theta_base": -81.328, "v0": -5.213, "v1": -17.639, "v2": 32.458, "v3": -36.390, "v4": 26.252, "amplitude": 36.329, "phase_angle": 26.688, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.249, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 249.041, 187.168, 283.696 ], "x_axis": [ -0.451, 0.246, -0.858 ], "y_axis": [ -0.543, 0.687, 0.483 ], "z_axis": [ 0.709, 0.683, -0.176 ], "quaternion": [ 0.515, -0.097, 0.761, 0.383 ] } }, { "index": 551, "index_chain": 551, "chain_name": "a", "nt_resnum": 552, "nt_name": "G", "nt_code": "G", "nt_id": "///a/552", "linked_nts": [ "///a/551", "///a/553" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -31.508, "beta": 137.237, "gamma": 36.809, "delta": 77.413, "epsilon": -158.382, "zeta": 34.747, "epsilon_zeta": 166.871, "bb_type": "--", "chi": -140.675, "glyco_bond": "anti", "C5prime_xyz": [ -1.537, 8.898, -0.694 ], "P_xyz": [ 1.022, 9.121, -1.150 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 150.350, "theta": -34.917, "eta_prime": 175.837, "theta_prime": -67.769, "eta_base": -114.918, "theta_base": -152.763, "v0": -4.401, "v1": -19.452, "v2": 34.474, "v3": -37.950, "v4": 26.820, "amplitude": 38.071, "phase_angle": 25.108, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.096, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 249.055, 190.308, 281.514 ], "x_axis": [ -0.840, 0.525, -0.135 ], "y_axis": [ 0.179, 0.504, 0.845 ], "z_axis": [ 0.512, 0.686, -0.518 ], "quaternion": [ 0.191, 0.208, 0.846, 0.452 ] } }, { "index": 552, "index_chain": 552, "chain_name": "a", "nt_resnum": 553, "nt_name": "A", "nt_code": "A", "nt_id": "///a/553", "linked_nts": [ "///a/552", "///a/554" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,non-canonical,multiplet", "alpha": -163.239, "beta": -173.064, "gamma": -0.110, "delta": 149.143, "epsilon": -118.664, "zeta": 97.857, "epsilon_zeta": 143.479, "bb_type": "--", "chi": 48.724, "glyco_bond": "syn", "C5prime_xyz": [ -5.430, 3.715, 0.621 ], "P_xyz": [ -6.854, 2.036, -0.780 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 60.354, "theta": 112.935, "eta_prime": 111.213, "theta_prime": 75.531, "eta_base": 70.822, "theta_base": 11.888, "v0": -22.762, "v1": 37.518, "v2": -37.086, "v3": 24.919, "v4": -1.580, "amplitude": 38.676, "phase_angle": 163.513, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.018, "origin": [ 252.178, 193.301, 280.732 ], "x_axis": [ -0.578, -0.279, -0.767 ], "y_axis": [ -0.712, 0.632, 0.307 ], "z_axis": [ 0.399, 0.723, -0.564 ], "quaternion": [ 0.350, -0.298, 0.833, 0.309 ] } }, { "index": 553, "index_chain": 553, "chain_name": "a", "nt_resnum": 554, "nt_name": "A", "nt_code": "A", "nt_id": "///a/554", "linked_nts": [ "///a/553", "///a/555" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn", "alpha": 89.333, "beta": -156.367, "gamma": 30.125, "delta": 139.817, "epsilon": -142.353, "zeta": 94.911, "epsilon_zeta": 122.736, "bb_type": "--", "chi": 50.889, "glyco_bond": "syn", "C5prime_xyz": [ -5.690, 4.650, 1.021 ], "P_xyz": [ -7.450, 3.168, -0.176 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 5.857, "theta": 87.137, "eta_prime": 7.538, "theta_prime": 46.230, "eta_base": 63.215, "theta_base": -15.780, "v0": -30.690, "v1": 41.091, "v2": -35.032, "v3": 18.391, "v4": 7.448, "amplitude": 40.224, "phase_angle": 150.565, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "6p", "suiteness": 0.063, "filter_rmsd": 0.043, "frame": { "rmsd": 0.019, "origin": [ 253.125, 202.451, 294.637 ], "x_axis": [ 0.594, 0.646, 0.479 ], "y_axis": [ 0.157, 0.491, -0.857 ], "z_axis": [ -0.789, 0.584, 0.190 ], "quaternion": [ 0.754, -0.478, -0.420, 0.162 ] } }, { "index": 554, "index_chain": 554, "chain_name": "a", "nt_resnum": 555, "nt_name": "U", "nt_code": "U", "nt_id": "///a/555", "linked_nts": [ "///a/554", "///a/556" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": 50.675, "beta": -171.702, "gamma": 68.045, "delta": 143.743, "epsilon": -155.364, "zeta": 87.128, "epsilon_zeta": 117.508, "bb_type": "--", "chi": -121.979, "glyco_bond": "anti", "C5prime_xyz": [ -2.161, 8.559, -1.200 ], "P_xyz": [ 0.174, 9.629, -0.785 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -26.296, "theta": 101.245, "eta_prime": 6.373, "theta_prime": 110.408, "eta_base": 64.033, "theta_base": 129.577, "v0": -25.785, "v1": 38.011, "v2": -35.001, "v3": 21.065, "v4": 2.687, "amplitude": 37.985, "phase_angle": 157.138, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "6p", "suiteness": 0.151, "filter_rmsd": 0.098, "frame": { "rmsd": 0.018, "origin": [ 249.829, 197.817, 276.738 ], "x_axis": [ 0.874, -0.485, -0.028 ], "y_axis": [ 0.269, 0.436, 0.859 ], "z_axis": [ -0.405, -0.758, 0.512 ], "quaternion": [ 0.840, 0.481, -0.112, -0.225 ] } }, { "index": 555, "index_chain": 555, "chain_name": "a", "nt_resnum": 556, "nt_name": "U", "nt_code": "U", "nt_id": "///a/556", "linked_nts": [ "///a/555", "///a/557" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": 62.694, "beta": 123.679, "gamma": -35.096, "delta": 155.302, "epsilon": -89.506, "zeta": 87.764, "epsilon_zeta": 182.731, "bb_type": "--", "chi": -130.313, "glyco_bond": "anti", "C5prime_xyz": [ -1.526, 8.471, -0.541 ], "P_xyz": [ -0.607, 9.684, 1.559 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -136.264, "theta": 109.254, "eta_prime": -155.903, "theta_prime": 74.488, "eta_base": 172.896, "theta_base": 55.168, "v0": -16.401, "v1": 33.934, "v2": -37.512, "v3": 29.051, "v4": -8.141, "amplitude": 37.754, "phase_angle": 173.505, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.102, "frame": { "rmsd": 0.014, "origin": [ 239.486, 208.213, 279.861 ], "x_axis": [ 0.418, -0.093, -0.904 ], "y_axis": [ 0.773, -0.487, 0.407 ], "z_axis": [ -0.478, -0.869, -0.132 ], "quaternion": [ 0.447, 0.714, 0.238, -0.484 ] } }, { "index": 556, "index_chain": 556, "chain_name": "a", "nt_resnum": 557, "nt_name": "A", "nt_code": "A", "nt_id": "///a/557", "linked_nts": [ "///a/556", "///a/558" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BII,non-canonical,helix-end", "alpha": 159.501, "beta": 154.870, "gamma": 83.778, "delta": 83.219, "epsilon": -113.784, "zeta": 138.926, "epsilon_zeta": 107.290, "bb_type": "BII", "chi": 71.441, "glyco_bond": "syn", "C5prime_xyz": [ -5.184, 5.445, 2.219 ], "P_xyz": [ -4.919, 3.953, 4.339 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 101.431, "theta": 99.071, "eta_prime": 100.720, "theta_prime": 76.839, "eta_base": 108.506, "theta_base": 22.764, "v0": -16.531, "v1": -6.166, "v2": 24.827, "v3": -35.045, "v4": 32.492, "amplitude": 35.455, "phase_angle": 45.554, "puckering": "C4'-exo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.051, "frame": { "rmsd": 0.026, "origin": [ 247.594, 207.940, 283.335 ], "x_axis": [ 0.798, -0.344, -0.495 ], "y_axis": [ 0.372, -0.365, 0.853 ], "z_axis": [ -0.474, -0.865, -0.164 ], "quaternion": [ 0.563, 0.763, 0.009, -0.318 ] } }, { "index": 557, "index_chain": 557, "chain_name": "a", "nt_resnum": 558, "nt_name": "C", "nt_code": "C", "nt_id": "///a/558", "linked_nts": [ "///a/557", "///a/559" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI", "alpha": 137.538, "beta": -163.358, "gamma": 48.721, "delta": 83.352, "epsilon": -133.528, "zeta": -69.472, "epsilon_zeta": -64.056, "bb_type": "BI", "chi": -166.157, "glyco_bond": "anti", "C5prime_xyz": [ -1.235, 8.747, 0.866 ], "P_xyz": [ 1.030, 9.176, 2.056 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 70.568, "theta": -131.684, "eta_prime": 74.436, "theta_prime": -125.845, "eta_base": 126.762, "theta_base": -86.349, "v0": -1.591, "v1": -20.338, "v2": 33.191, "v3": -35.021, "v4": 23.140, "amplitude": 35.576, "phase_angle": 21.099, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.071, "frame": { "rmsd": 0.015, "origin": [ 241.638, 202.148, 296.632 ], "x_axis": [ -0.028, -0.478, -0.878 ], "y_axis": [ 0.069, 0.875, -0.479 ], "z_axis": [ 0.997, -0.074, 0.008 ], "quaternion": [ 0.681, -0.149, 0.688, -0.201 ] } }, { "index": 558, "index_chain": 558, "chain_name": "a", "nt_resnum": 559, "nt_name": "U", "nt_code": "U", "nt_id": "///a/559", "linked_nts": [ "///a/558", "///a/560" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -72.354, "beta": 171.386, "gamma": 55.843, "delta": 81.835, "epsilon": -155.075, "zeta": 39.499, "epsilon_zeta": 165.426, "bb_type": "--", "chi": -153.839, "glyco_bond": "anti", "C5prime_xyz": [ -1.627, 8.774, 0.151 ], "P_xyz": [ 0.915, 9.363, 0.170 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.068, "theta": -25.057, "eta_prime": 178.958, "theta_prime": -67.340, "eta_base": -127.757, "theta_base": -101.737, "v0": -0.828, "v1": -21.670, "v2": 34.649, "v3": -36.091, "v4": 23.301, "amplitude": 36.844, "phase_angle": 19.875, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.845, "filter_rmsd": 0.104, "frame": { "rmsd": 0.018, "origin": [ 244.859, 200.714, 294.996 ], "x_axis": [ -0.222, 0.229, -0.948 ], "y_axis": [ 0.192, 0.963, 0.188 ], "z_axis": [ 0.956, -0.140, -0.258 ], "quaternion": [ 0.609, 0.135, 0.781, 0.015 ] } }, { "index": 559, "index_chain": 559, "chain_name": "a", "nt_resnum": 560, "nt_name": "G", "nt_code": "G", "nt_id": "///a/560", "linked_nts": [ "///a/559", "///a/561" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,helix-end", "alpha": 149.972, "beta": 164.386, "gamma": 55.072, "delta": 144.038, "epsilon": -91.885, "zeta": 162.715, "epsilon_zeta": 105.399, "bb_type": "BII", "chi": -144.453, "glyco_bond": "anti", "C5prime_xyz": [ -1.534, 8.801, 0.100 ], "P_xyz": [ 0.706, 9.095, 1.419 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 56.867, "theta": 164.965, "eta_prime": 117.294, "theta_prime": 163.865, "eta_base": 124.076, "theta_base": -170.141, "v0": -21.361, "v1": 35.018, "v2": -34.574, "v3": 23.117, "v4": -1.391, "amplitude": 36.092, "phase_angle": 163.326, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "5z", "suiteness": 0.699, "filter_rmsd": 0.024, "frame": { "rmsd": 0.024, "origin": [ 247.437, 200.543, 292.293 ], "x_axis": [ 0.080, -0.658, 0.749 ], "y_axis": [ 0.516, 0.670, 0.533 ], "z_axis": [ -0.853, 0.344, 0.394 ], "quaternion": [ 0.732, 0.065, -0.547, -0.401 ] } }, { "index": 560, "index_chain": 560, "chain_name": "a", "nt_resnum": 561, "nt_name": "G", "nt_code": "G", "nt_id": "///a/561", "linked_nts": [ "///a/560", "///a/562" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -77.122, "beta": 163.104, "gamma": 79.556, "delta": 77.105, "epsilon": -144.464, "zeta": -47.836, "epsilon_zeta": -96.628, "bb_type": "BI", "chi": -166.230, "glyco_bond": "anti", "C5prime_xyz": [ -1.723, 8.791, 0.832 ], "P_xyz": [ 0.658, 9.641, 0.218 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -131.059, "theta": -126.941, "eta_prime": -139.027, "theta_prime": -134.009, "eta_base": -128.051, "theta_base": -109.397, "v0": -0.595, "v1": -24.194, "v2": 38.423, "v3": -39.738, "v4": 25.395, "amplitude": 40.724, "phase_angle": 19.353, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "4a", "suiteness": 0.059, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 247.601, 211.943, 283.560 ], "x_axis": [ -0.737, 0.509, 0.445 ], "y_axis": [ 0.376, -0.238, 0.896 ], "z_axis": [ 0.562, 0.827, -0.016 ], "quaternion": [ 0.048, 0.360, 0.615, 0.700 ] } }, { "index": 561, "index_chain": 561, "chain_name": "a", "nt_resnum": 562, "nt_name": "G", "nt_code": "G", "nt_id": "///a/562", "linked_nts": [ "///a/561", "///a/563" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem,multiplet", "alpha": -128.414, "beta": 147.155, "gamma": 138.542, "delta": 78.976, "epsilon": -122.949, "zeta": -85.050, "epsilon_zeta": -37.899, "bb_type": "--", "chi": -175.496, "glyco_bond": "anti", "C5prime_xyz": [ -1.499, 8.576, 1.411 ], "P_xyz": [ -0.092, 10.352, 0.105 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.198, "theta": -164.842, "eta_prime": -166.008, "theta_prime": -158.137, "eta_base": -120.003, "theta_base": -129.927, "v0": 0.921, "v1": -24.618, "v2": 37.661, "v3": -38.073, "v4": 23.440, "amplitude": 39.433, "phase_angle": 17.242, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 246.846, 216.707, 283.347 ], "x_axis": [ -0.360, 0.362, 0.860 ], "y_axis": [ 0.769, -0.406, 0.493 ], "z_axis": [ 0.527, 0.839, -0.132 ], "quaternion": [ -0.159, 0.543, 0.521, 0.639 ] } }, { "index": 562, "index_chain": 562, "chain_name": "a", "nt_resnum": 563, "nt_name": "C", "nt_code": "C", "nt_id": "///a/563", "linked_nts": [ "///a/562", "///a/564" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -69.992, "beta": 171.463, "gamma": 59.662, "delta": 83.342, "epsilon": -137.728, "zeta": -177.567, "epsilon_zeta": 39.839, "bb_type": "--", "chi": -132.036, "glyco_bond": "anti", "C5prime_xyz": [ -1.770, 8.677, -1.128 ], "P_xyz": [ 0.699, 9.114, -1.850 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.379, "theta": 140.046, "eta_prime": 179.388, "theta_prime": 120.724, "eta_base": -146.986, "theta_base": 6.871, "v0": -2.667, "v1": -18.971, "v2": 32.049, "v3": -34.453, "v4": 23.464, "amplitude": 34.785, "phase_angle": 22.874, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.570, "filter_rmsd": 0.062, "frame": { "rmsd": 0.015, "origin": [ 246.726, 219.366, 283.343 ], "x_axis": [ 0.077, 0.021, 0.997 ], "y_axis": [ 0.993, -0.092, -0.075 ], "z_axis": [ 0.090, 0.996, -0.028 ], "quaternion": [ -0.489, 0.547, 0.463, 0.497 ] } }, { "index": 563, "index_chain": 563, "chain_name": "a", "nt_resnum": 564, "nt_name": "G", "nt_code": "G", "nt_id": "///a/564", "linked_nts": [ "///a/563", "///a/565" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end,stem-end", "alpha": 90.788, "beta": 165.861, "gamma": 68.140, "delta": 82.409, "epsilon": -114.718, "zeta": -87.789, "epsilon_zeta": -26.929, "bb_type": "--", "chi": -170.279, "glyco_bond": "anti", "C5prime_xyz": [ -1.385, 8.662, 1.130 ], "P_xyz": [ 1.210, 9.032, 1.180 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 2.084, "theta": -134.012, "eta_prime": 4.117, "theta_prime": -133.369, "eta_base": 116.884, "theta_base": -110.851, "v0": 0.802, "v1": -22.106, "v2": 33.848, "v3": -34.306, "v4": 21.155, "amplitude": 35.463, "phase_angle": 17.353, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "3d", "suiteness": 0.246, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 264.911, 220.882, 278.728 ], "x_axis": [ -0.047, -0.651, 0.758 ], "y_axis": [ -0.954, 0.255, 0.160 ], "z_axis": [ -0.297, -0.715, -0.633 ], "quaternion": [ -0.379, -0.577, 0.695, -0.200 ] } }, { "index": 564, "index_chain": 564, "chain_name": "a", "nt_resnum": 565, "nt_name": "U", "nt_code": "U", "nt_id": "///a/565", "linked_nts": [ "///a/564", "///a/566" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end,stem-end", "alpha": -79.768, "beta": 161.281, "gamma": 66.285, "delta": 85.365, "epsilon": -114.041, "zeta": -83.619, "epsilon_zeta": -30.421, "bb_type": "--", "chi": -156.210, "glyco_bond": "anti", "C5prime_xyz": [ -1.553, 8.775, 0.265 ], "P_xyz": [ 0.995, 9.229, -0.107 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.243, "theta": -84.282, "eta_prime": 176.528, "theta_prime": -102.514, "eta_base": -150.631, "theta_base": -108.875, "v0": -2.385, "v1": -18.291, "v2": 30.729, "v3": -32.948, "v4": 22.305, "amplitude": 33.282, "phase_angle": 22.590, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.269, "filter_rmsd": 0.103, "frame": { "rmsd": 0.016, "origin": [ 264.632, 217.688, 277.286 ], "x_axis": [ -0.442, -0.078, 0.894 ], "y_axis": [ -0.827, 0.423, -0.372 ], "z_axis": [ -0.349, -0.903, -0.251 ], "quaternion": [ -0.427, -0.311, 0.727, -0.438 ] } }, { "index": 565, "index_chain": 565, "chain_name": "a", "nt_resnum": 566, "nt_name": "A", "nt_code": "A", "nt_id": "///a/566", "linked_nts": [ "///a/565", "///a/567" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 89.752, "beta": 148.233, "gamma": -103.956, "delta": 89.442, "epsilon": -68.752, "zeta": -150.363, "epsilon_zeta": 81.611, "bb_type": "--", "chi": -101.631, "glyco_bond": "anti", "C5prime_xyz": [ -2.414, 7.699, -2.562 ], "P_xyz": [ -2.659, 9.912, -3.954 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 144.350, "theta": -160.458, "eta_prime": 162.314, "theta_prime": -148.896, "eta_base": 172.820, "theta_base": -141.467, "v0": -2.288, "v1": -17.322, "v2": 28.843, "v3": -30.942, "v4": 21.094, "amplitude": 31.248, "phase_angle": 22.628, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.020, "origin": [ 261.411, 211.284, 278.528 ], "x_axis": [ -0.309, 0.440, 0.843 ], "y_axis": [ -0.711, 0.482, -0.512 ], "z_axis": [ -0.632, -0.757, 0.164 ], "quaternion": [ 0.578, 0.106, -0.638, 0.498 ] } }, { "index": 566, "index_chain": 566, "chain_name": "a", "nt_resnum": 567, "nt_name": "A", "nt_code": "A", "nt_id": "///a/567", "linked_nts": [ "///a/566", "///a/568" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": 2.139, "beta": 128.763, "gamma": -31.739, "delta": 93.004, "epsilon": -152.134, "zeta": -66.993, "epsilon_zeta": -85.141, "bb_type": "BI", "chi": -139.585, "glyco_bond": "anti", "C5prime_xyz": [ -1.058, 8.510, -0.613 ], "P_xyz": [ 0.947, 9.423, 0.807 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 130.157, "theta": -142.112, "eta_prime": 142.159, "theta_prime": -133.486, "eta_base": 146.344, "theta_base": -94.287, "v0": 5.291, "v1": -21.473, "v2": 28.422, "v3": -26.173, "v4": 13.306, "amplitude": 28.721, "phase_angle": 8.271, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.017, "origin": [ 252.243, 210.867, 278.795 ], "x_axis": [ 0.969, 0.021, 0.246 ], "y_axis": [ 0.222, 0.362, -0.905 ], "z_axis": [ -0.108, 0.932, 0.346 ], "quaternion": [ 0.818, -0.561, -0.108, -0.062 ] } }, { "index": 567, "index_chain": 567, "chain_name": "a", "nt_resnum": 568, "nt_name": "A", "nt_code": "A", "nt_id": "///a/568", "linked_nts": [ "///a/567", "///a/569" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -80.682, "beta": 173.765, "gamma": 63.091, "delta": 87.192, "epsilon": -91.757, "zeta": -119.560, "epsilon_zeta": 27.803, "bb_type": "--", "chi": -133.263, "glyco_bond": "anti", "C5prime_xyz": [ -1.439, 8.495, -1.012 ], "P_xyz": [ 1.080, 8.635, -1.694 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.867, "theta": -149.057, "eta_prime": -164.659, "theta_prime": -150.869, "eta_base": -125.949, "theta_base": -179.096, "v0": 3.320, "v1": -23.153, "v2": 32.991, "v3": -31.956, "v4": 18.149, "amplitude": 33.873, "phase_angle": 13.102, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.486, "filter_rmsd": 0.041, "frame": { "rmsd": 0.023, "origin": [ 253.600, 214.281, 279.649 ], "x_axis": [ 0.919, 0.055, -0.392 ], "y_axis": [ -0.363, 0.511, -0.779 ], "z_axis": [ 0.157, 0.858, 0.490 ], "quaternion": [ 0.854, -0.479, 0.161, 0.122 ] } }, { "index": 568, "index_chain": 568, "chain_name": "a", "nt_resnum": 569, "nt_name": "G", "nt_code": "G", "nt_id": "///a/569", "linked_nts": [ "///a/568", "///a/570" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix", "alpha": -14.664, "beta": -145.975, "gamma": -60.595, "delta": 151.933, "epsilon": -86.552, "zeta": 84.301, "epsilon_zeta": 189.147, "bb_type": "--", "chi": -88.692, "glyco_bond": "anti", "C5prime_xyz": [ -2.641, 7.733, -2.446 ], "P_xyz": [ -3.106, 9.801, -3.979 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -173.907, "theta": 93.749, "eta_prime": 177.979, "theta_prime": 100.967, "eta_base": 148.739, "theta_base": 107.305, "v0": -23.203, "v1": 39.002, "v2": -38.872, "v3": 26.486, "v4": -2.327, "amplitude": 40.358, "phase_angle": 164.405, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 246.853, 224.359, 284.581 ], "x_axis": [ 0.637, -0.525, 0.565 ], "y_axis": [ 0.582, -0.154, -0.798 ], "z_axis": [ 0.506, 0.837, 0.207 ], "quaternion": [ 0.650, -0.629, -0.023, -0.426 ] } }, { "index": 569, "index_chain": 569, "chain_name": "a", "nt_resnum": 570, "nt_name": "C", "nt_code": "C", "nt_id": "///a/570", "linked_nts": [ "///a/569", "///a/571" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-stack", "alpha": 59.491, "beta": 147.295, "gamma": -81.233, "delta": 145.616, "epsilon": -143.543, "zeta": -17.164, "epsilon_zeta": -126.379, "bb_type": "--", "chi": -122.841, "glyco_bond": "anti", "C5prime_xyz": [ -2.061, 8.608, -1.082 ], "P_xyz": [ -1.974, 11.193, -0.776 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -152.994, "theta": -41.409, "eta_prime": -169.150, "theta_prime": -89.057, "eta_base": -174.614, "theta_base": -121.953, "v0": -23.252, "v1": 36.489, "v2": -35.107, "v3": 22.548, "v4": 0.202, "amplitude": 37.150, "phase_angle": 160.910, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.059, "frame": { "rmsd": 0.011, "origin": [ 237.463, 227.570, 279.261 ], "x_axis": [ 0.221, 0.271, 0.937 ], "y_axis": [ 0.970, 0.037, -0.239 ], "z_axis": [ -0.100, 0.962, -0.255 ], "quaternion": [ 0.501, -0.600, -0.518, -0.349 ] } }, { "index": 570, "index_chain": 570, "chain_name": "a", "nt_resnum": 571, "nt_name": "G", "nt_code": "G", "nt_id": "///a/571", "linked_nts": [ "///a/570", "///a/572" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix-end,stem-end,multiplet", "alpha": 115.800, "beta": 153.286, "gamma": 58.335, "delta": 81.618, "epsilon": -162.303, "zeta": -80.318, "epsilon_zeta": -81.985, "bb_type": "BI", "chi": -169.374, "glyco_bond": "anti", "C5prime_xyz": [ -1.605, 8.719, 1.028 ], "P_xyz": [ 0.984, 9.108, 1.132 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -25.348, "theta": -123.904, "eta_prime": 41.647, "theta_prime": -134.005, "eta_base": 86.363, "theta_base": -99.939, "v0": -2.462, "v1": -20.191, "v2": 33.697, "v3": -36.105, "v4": 24.413, "amplitude": 36.453, "phase_angle": 22.420, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 239.451, 236.384, 271.720 ], "x_axis": [ -0.858, -0.513, -0.037 ], "y_axis": [ 0.512, -0.847, -0.142 ], "z_axis": [ 0.041, -0.141, 0.989 ], "quaternion": [ -0.267, 0.001, -0.073, 0.961 ] } }, { "index": 571, "index_chain": 571, "chain_name": "a", "nt_resnum": 572, "nt_name": "C", "nt_code": "C", "nt_id": "///a/572", "linked_nts": [ "///a/571", "///a/573" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 159.526, "beta": -146.870, "gamma": 162.388, "delta": 78.738, "epsilon": -130.535, "zeta": -56.459, "epsilon_zeta": -74.075, "bb_type": "BI", "chi": -167.874, "glyco_bond": "anti", "C5prime_xyz": [ -1.337, 8.699, 1.005 ], "P_xyz": [ 0.578, 9.751, -0.391 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.176, "theta": -140.967, "eta_prime": 179.624, "theta_prime": -151.924, "eta_base": -122.395, "theta_base": -142.873, "v0": 1.215, "v1": -24.648, "v2": 37.664, "v3": -37.939, "v4": 23.033, "amplitude": 39.354, "phase_angle": 16.850, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.461, "filter_rmsd": 0.071, "frame": { "rmsd": 0.016, "origin": [ 237.429, 236.024, 274.660 ], "x_axis": [ -0.345, -0.937, 0.056 ], "y_axis": [ 0.936, -0.339, 0.097 ], "z_axis": [ -0.072, 0.085, 0.994 ], "quaternion": [ 0.572, 0.005, -0.056, -0.818 ] } }, { "index": 572, "index_chain": 572, "chain_name": "a", "nt_resnum": 573, "nt_name": "G", "nt_code": "G", "nt_id": "///a/573", "linked_nts": [ "///a/572", "///a/574" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -125.517, "beta": 131.671, "gamma": 139.805, "delta": 81.717, "epsilon": -121.216, "zeta": -78.709, "epsilon_zeta": -42.507, "bb_type": "--", "chi": -179.085, "glyco_bond": "anti", "C5prime_xyz": [ -1.405, 8.494, 1.592 ], "P_xyz": [ -0.086, 10.317, 0.274 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.883, "theta": -163.514, "eta_prime": -177.494, "theta_prime": -157.243, "eta_base": -152.811, "theta_base": -107.910, "v0": 0.433, "v1": -22.325, "v2": 34.507, "v3": -35.196, "v4": 22.006, "amplitude": 36.276, "phase_angle": 17.968, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 234.678, 236.479, 277.699 ], "x_axis": [ 0.013, -0.999, -0.048 ], "y_axis": [ 0.987, 0.005, 0.162 ], "z_axis": [ -0.162, -0.049, 0.986 ], "quaternion": [ 0.708, 0.075, -0.040, -0.701 ] } }, { "index": 573, "index_chain": 573, "chain_name": "a", "nt_resnum": 574, "nt_name": "C", "nt_code": "C", "nt_id": "///a/574", "linked_nts": [ "///a/573", "///a/575" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -74.920, "beta": 157.771, "gamma": 66.059, "delta": 82.401, "epsilon": -139.994, "zeta": -66.520, "epsilon_zeta": -73.474, "bb_type": "BI", "chi": -153.775, "glyco_bond": "anti", "C5prime_xyz": [ -1.424, 8.810, 0.142 ], "P_xyz": [ 1.089, 9.107, -0.499 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.805, "theta": -130.366, "eta_prime": 176.879, "theta_prime": -132.449, "eta_base": -121.085, "theta_base": -93.319, "v0": -0.129, "v1": -21.852, "v2": 34.268, "v3": -35.239, "v4": 22.371, "amplitude": 36.197, "phase_angle": 18.792, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.442, "filter_rmsd": 0.065, "frame": { "rmsd": 0.015, "origin": [ 233.914, 234.709, 279.865 ], "x_axis": [ 0.673, -0.736, 0.075 ], "y_axis": [ 0.640, 0.630, 0.440 ], "z_axis": [ -0.371, -0.248, 0.895 ], "quaternion": [ 0.894, 0.192, -0.125, -0.385 ] } }, { "index": 574, "index_chain": 574, "chain_name": "a", "nt_resnum": 575, "nt_name": "G", "nt_code": "G", "nt_id": "///a/575", "linked_nts": [ "///a/574", "///a/576" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -74.024, "beta": 166.801, "gamma": 66.498, "delta": 82.092, "epsilon": -168.641, "zeta": -94.275, "epsilon_zeta": -74.365, "bb_type": "BI", "chi": -152.719, "glyco_bond": "anti", "C5prime_xyz": [ -1.441, 8.815, 0.093 ], "P_xyz": [ 1.093, 9.294, -0.336 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.403, "theta": 179.875, "eta_prime": -174.336, "theta_prime": 175.690, "eta_base": -114.371, "theta_base": 125.220, "v0": -1.203, "v1": -20.626, "v2": 33.286, "v3": -34.960, "v4": 22.874, "amplitude": 35.549, "phase_angle": 20.553, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.666, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 234.911, 232.141, 282.860 ], "x_axis": [ 0.990, -0.026, 0.137 ], "y_axis": [ -0.038, 0.894, 0.447 ], "z_axis": [ -0.135, -0.448, 0.884 ], "quaternion": [ 0.971, 0.231, -0.070, 0.003 ] } }, { "index": 575, "index_chain": 575, "chain_name": "a", "nt_resnum": 576, "nt_name": "U", "nt_code": "U", "nt_id": "///a/576", "linked_nts": [ "///a/575", "///a/577" ], "nt_type": "RNA", "dbn": ".", "summary": "BI", "alpha": -78.024, "beta": 174.933, "gamma": 65.707, "delta": 78.679, "epsilon": -137.983, "zeta": -73.503, "epsilon_zeta": -64.480, "bb_type": "BI", "chi": -58.949, "glyco_bond": "--", "C5prime_xyz": [ -3.931, 5.924, -3.237 ], "P_xyz": [ -2.966, 4.626, -5.287 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.959, "theta": -139.626, "eta_prime": 168.570, "theta_prime": -136.879, "eta_base": 123.560, "theta_base": -128.229, "v0": -3.869, "v1": -19.990, "v2": 34.901, "v3": -38.057, "v4": 26.418, "amplitude": 38.274, "phase_angle": 24.236, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "&a", "suiteness": 0.577, "filter_rmsd": 0.109, "frame": { "rmsd": 0.017, "origin": [ 231.738, 232.851, 283.112 ], "x_axis": [ 0.532, -0.834, 0.149 ], "y_axis": [ -0.558, -0.212, 0.802 ], "z_axis": [ -0.637, -0.510, -0.578 ], "quaternion": [ 0.430, 0.762, -0.457, -0.160 ] } }, { "index": 576, "index_chain": 576, "chain_name": "a", "nt_resnum": 577, "nt_name": "A", "nt_code": "A", "nt_id": "///a/577", "linked_nts": [ "///a/576", "///a/578" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -70.258, "beta": 174.802, "gamma": 60.674, "delta": 77.788, "epsilon": -135.560, "zeta": -50.853, "epsilon_zeta": -84.707, "bb_type": "BI", "chi": -156.523, "glyco_bond": "anti", "C5prime_xyz": [ -1.539, 8.720, 0.232 ], "P_xyz": [ 0.980, 9.328, -0.108 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.061, "theta": -117.855, "eta_prime": -177.412, "theta_prime": -113.580, "eta_base": -166.328, "theta_base": -68.177, "v0": 2.026, "v1": -25.964, "v2": 38.674, "v3": -38.491, "v4": 22.984, "amplitude": 40.175, "phase_angle": 15.712, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.848, "filter_rmsd": 0.041, "frame": { "rmsd": 0.019, "origin": [ 232.009, 226.534, 287.894 ], "x_axis": [ 0.783, 0.600, 0.166 ], "y_axis": [ -0.607, 0.678, 0.414 ], "z_axis": [ 0.135, -0.425, 0.895 ], "quaternion": [ 0.916, 0.229, -0.008, 0.329 ] } }, { "index": 577, "index_chain": 577, "chain_name": "a", "nt_resnum": 578, "nt_name": "G", "nt_code": "G", "nt_id": "///a/578", "linked_nts": [ "///a/577", "///a/579" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -81.394, "beta": 167.528, "gamma": 75.313, "delta": 78.608, "epsilon": -140.089, "zeta": -77.031, "epsilon_zeta": -63.058, "bb_type": "BI", "chi": -167.125, "glyco_bond": "anti", "C5prime_xyz": [ -1.516, 8.680, 0.936 ], "P_xyz": [ 0.994, 9.285, 0.529 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.864, "theta": -146.001, "eta_prime": -167.428, "theta_prime": -148.280, "eta_base": -96.422, "theta_base": -123.187, "v0": 2.562, "v1": -26.305, "v2": 38.783, "v3": -38.274, "v4": 22.480, "amplitude": 40.143, "phase_angle": 14.957, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.210, "filter_rmsd": 0.022, "frame": { "rmsd": 0.022, "origin": [ 235.139, 230.112, 291.674 ], "x_axis": [ -0.210, 0.955, 0.210 ], "y_axis": [ -0.940, -0.256, 0.227 ], "z_axis": [ 0.271, -0.150, 0.951 ], "quaternion": [ 0.609, 0.155, 0.025, 0.777 ] } }, { "index": 578, "index_chain": 578, "chain_name": "a", "nt_resnum": 579, "nt_name": "G", "nt_code": "G", "nt_id": "///a/579", "linked_nts": [ "///a/578", "///a/580" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -72.094, "beta": 168.462, "gamma": 62.137, "delta": 78.224, "epsilon": -129.964, "zeta": -82.502, "epsilon_zeta": -47.462, "bb_type": "BI", "chi": -173.329, "glyco_bond": "anti", "C5prime_xyz": [ -1.459, 8.645, 1.250 ], "P_xyz": [ 1.075, 9.167, 1.465 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.002, "theta": -142.253, "eta_prime": 177.011, "theta_prime": -139.201, "eta_base": -143.420, "theta_base": -107.476, "v0": -0.225, "v1": -23.697, "v2": 37.209, "v3": -38.318, "v4": 24.314, "amplitude": 39.325, "phase_angle": 18.879, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.811, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 237.171, 231.134, 294.604 ], "x_axis": [ -0.758, 0.652, 0.027 ], "y_axis": [ -0.647, -0.756, 0.098 ], "z_axis": [ 0.084, 0.057, 0.995 ], "quaternion": [ 0.347, 0.030, 0.041, 0.937 ] } }, { "index": 579, "index_chain": 579, "chain_name": "a", "nt_resnum": 580, "nt_name": "U", "nt_code": "U", "nt_id": "///a/580", "linked_nts": [ "///a/579", "///a/581" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -63.429, "beta": 161.755, "gamma": 57.044, "delta": 80.135, "epsilon": -147.477, "zeta": -73.378, "epsilon_zeta": -74.099, "bb_type": "BI", "chi": -156.341, "glyco_bond": "anti", "C5prime_xyz": [ -1.657, 8.757, 0.279 ], "P_xyz": [ 0.873, 9.266, -0.058 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.043, "theta": -143.697, "eta_prime": 177.794, "theta_prime": -138.135, "eta_base": -135.399, "theta_base": -120.970, "v0": 0.638, "v1": -24.237, "v2": 37.235, "v3": -37.699, "v4": 23.383, "amplitude": 39.049, "phase_angle": 17.534, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.727, "filter_rmsd": 0.103, "frame": { "rmsd": 0.016, "origin": [ 237.050, 233.053, 297.195 ], "x_axis": [ -0.996, 0.090, -0.004 ], "y_axis": [ -0.087, -0.953, 0.290 ], "z_axis": [ 0.022, 0.289, 0.957 ], "quaternion": [ 0.045, 0.004, 0.147, 0.988 ] } }, { "index": 580, "index_chain": 580, "chain_name": "a", "nt_resnum": 581, "nt_name": "G", "nt_code": "G", "nt_id": "///a/581", "linked_nts": [ "///a/580", "///a/582" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -63.092, "beta": -174.408, "gamma": 67.216, "delta": 138.662, "epsilon": -150.405, "zeta": -160.716, "epsilon_zeta": 10.311, "bb_type": "--", "chi": -131.003, "glyco_bond": "anti", "C5prime_xyz": [ -2.034, 8.743, -0.768 ], "P_xyz": [ 0.391, 9.623, -0.321 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -174.414, "theta": 171.298, "eta_prime": -148.767, "theta_prime": 166.224, "eta_base": -126.107, "theta_base": -166.384, "v0": -25.379, "v1": 35.416, "v2": -31.204, "v3": 17.357, "v4": 4.895, "amplitude": 34.933, "phase_angle": 153.285, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.770, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 235.559, 235.545, 300.680 ], "x_axis": [ -0.838, -0.484, -0.252 ], "y_axis": [ 0.395, -0.857, 0.331 ], "z_axis": [ -0.376, 0.178, 0.909 ], "quaternion": [ -0.231, -0.165, 0.134, 0.949 ] } }, { "index": 581, "index_chain": 581, "chain_name": "a", "nt_resnum": 582, "nt_name": "G", "nt_code": "G", "nt_id": "///a/582", "linked_nts": [ "///a/581", "///a/583" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -36.465, "beta": -161.023, "gamma": 18.061, "delta": 79.779, "epsilon": -140.877, "zeta": -59.582, "epsilon_zeta": -81.296, "bb_type": "BI", "chi": -172.925, "glyco_bond": "anti", "C5prime_xyz": [ -1.186, 8.507, 1.277 ], "P_xyz": [ 0.659, 9.047, 3.021 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -152.309, "theta": -139.727, "eta_prime": -175.018, "theta_prime": -127.942, "eta_base": -167.606, "theta_base": -74.925, "v0": 4.883, "v1": -27.926, "v2": 39.097, "v3": -37.330, "v4": 20.489, "amplitude": 39.932, "phase_angle": 11.742, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 241.076, 241.265, 309.587 ], "x_axis": [ -0.983, -0.177, -0.040 ], "y_axis": [ 0.168, -0.800, -0.576 ], "z_axis": [ 0.070, -0.573, 0.817 ], "quaternion": [ -0.091, 0.008, -0.303, 0.949 ] } }, { "index": 582, "index_chain": 582, "chain_name": "a", "nt_resnum": 583, "nt_name": "U", "nt_code": "U", "nt_id": "///a/583", "linked_nts": [ "///a/582", "///a/584" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -76.038, "beta": -176.913, "gamma": 59.137, "delta": 81.779, "epsilon": -168.747, "zeta": -94.868, "epsilon_zeta": -73.878, "bb_type": "BI", "chi": -149.301, "glyco_bond": "anti", "C5prime_xyz": [ -1.602, 8.745, -0.099 ], "P_xyz": [ 0.952, 9.275, -0.092 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.764, "theta": -147.398, "eta_prime": -173.218, "theta_prime": -153.291, "eta_base": -110.309, "theta_base": -152.972, "v0": 0.474, "v1": -22.759, "v2": 35.205, "v3": -35.833, "v4": 22.288, "amplitude": 36.986, "phase_angle": 17.848, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.789, "filter_rmsd": 0.106, "frame": { "rmsd": 0.010, "origin": [ 238.355, 239.769, 311.776 ], "x_axis": [ -0.566, -0.662, -0.491 ], "y_axis": [ 0.805, -0.573, -0.156 ], "z_axis": [ -0.178, -0.483, 0.857 ], "quaternion": [ -0.424, -0.193, -0.184, 0.866 ] } }, { "index": 583, "index_chain": 583, "chain_name": "a", "nt_resnum": 584, "nt_name": "U", "nt_code": "U", "nt_id": "///a/584", "linked_nts": [ "///a/583", "///a/585" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 175.392, "beta": -149.575, "gamma": 157.186, "delta": 78.999, "epsilon": -102.305, "zeta": -108.192, "epsilon_zeta": 5.887, "bb_type": "--", "chi": -158.623, "glyco_bond": "anti", "C5prime_xyz": [ -1.611, 8.789, 0.427 ], "P_xyz": [ 0.136, 9.755, -1.225 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.379, "theta": -132.499, "eta_prime": 177.296, "theta_prime": -144.857, "eta_base": -175.422, "theta_base": -126.518, "v0": -1.044, "v1": -22.295, "v2": 35.926, "v3": -37.554, "v4": 24.301, "amplitude": 38.272, "phase_angle": 20.165, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.124, "filter_rmsd": 0.101, "frame": { "rmsd": 0.011, "origin": [ 236.506, 239.729, 315.811 ], "x_axis": [ -0.355, -0.735, -0.578 ], "y_axis": [ 0.869, -0.487, 0.085 ], "z_axis": [ -0.344, -0.472, 0.812 ], "quaternion": [ -0.492, -0.283, -0.119, 0.815 ] } }, { "index": 584, "index_chain": 584, "chain_name": "a", "nt_resnum": 585, "nt_name": "C", "nt_code": "C", "nt_id": "///a/585", "linked_nts": [ "///a/584", "///a/586" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 84.024, "beta": -127.923, "gamma": -138.355, "delta": 83.370, "epsilon": -131.547, "zeta": -67.925, "epsilon_zeta": -63.622, "bb_type": "BI", "chi": -175.385, "glyco_bond": "anti", "C5prime_xyz": [ -0.981, 8.404, 1.506 ], "P_xyz": [ -0.044, 10.545, 0.370 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.886, "theta": -168.785, "eta_prime": 169.736, "theta_prime": -159.953, "eta_base": -154.052, "theta_base": -120.284, "v0": 6.222, "v1": -27.214, "v2": 36.907, "v3": -34.179, "v4": 17.590, "amplitude": 37.384, "phase_angle": 9.168, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.075, "frame": { "rmsd": 0.017, "origin": [ 233.378, 236.682, 317.730 ], "x_axis": [ 0.222, -0.541, -0.811 ], "y_axis": [ 0.949, -0.070, 0.307 ], "z_axis": [ -0.223, -0.838, 0.498 ], "quaternion": [ 0.642, 0.445, 0.229, -0.580 ] } }, { "index": 585, "index_chain": 585, "chain_name": "a", "nt_resnum": 586, "nt_name": "A", "nt_code": "A", "nt_id": "///a/586", "linked_nts": [ "///a/585", "///a/587" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -62.620, "beta": 169.915, "gamma": 48.758, "delta": 74.358, "epsilon": -144.735, "zeta": -80.184, "epsilon_zeta": -64.551, "bb_type": "BI", "chi": -168.367, "glyco_bond": "anti", "C5prime_xyz": [ -1.539, 8.672, 0.959 ], "P_xyz": [ 0.975, 9.319, 1.219 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.882, "theta": -154.822, "eta_prime": 175.212, "theta_prime": -151.539, "eta_base": -130.102, "theta_base": -119.970, "v0": 1.694, "v1": -26.792, "v2": 40.418, "v3": -40.408, "v4": 24.370, "amplitude": 42.103, "phase_angle": 16.265, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.752, "filter_rmsd": 0.040, "frame": { "rmsd": 0.012, "origin": [ 231.966, 233.357, 317.348 ], "x_axis": [ 0.780, -0.394, -0.487 ], "y_axis": [ 0.594, 0.220, 0.774 ], "z_axis": [ -0.198, -0.893, 0.405 ], "quaternion": [ 0.775, 0.537, 0.093, -0.318 ] } }, { "index": 586, "index_chain": 586, "chain_name": "a", "nt_resnum": 587, "nt_name": "G", "nt_code": "G", "nt_id": "///a/587", "linked_nts": [ "///a/586", "///a/588" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -58.705, "beta": 159.219, "gamma": 63.346, "delta": 79.125, "epsilon": -138.003, "zeta": -84.098, "epsilon_zeta": -53.905, "bb_type": "BI", "chi": -173.148, "glyco_bond": "anti", "C5prime_xyz": [ -1.236, 8.577, 1.258 ], "P_xyz": [ 1.349, 8.893, 1.082 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.286, "theta": -143.672, "eta_prime": -174.386, "theta_prime": -140.244, "eta_base": -130.292, "theta_base": -99.370, "v0": 3.583, "v1": -26.791, "v2": 38.577, "v3": -37.374, "v4": 21.402, "amplitude": 39.665, "phase_angle": 13.453, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.684, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 231.460, 229.744, 316.820 ], "x_axis": [ 0.986, -0.169, 0.014 ], "y_axis": [ 0.046, 0.352, 0.935 ], "z_axis": [ -0.163, -0.921, 0.354 ], "quaternion": [ 0.820, 0.566, -0.054, -0.065 ] } }, { "index": 587, "index_chain": 587, "chain_name": "a", "nt_resnum": 588, "nt_name": "C", "nt_code": "C", "nt_id": "///a/588", "linked_nts": [ "///a/587", "///a/589" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -45.988, "beta": 155.450, "gamma": 54.169, "delta": 86.200, "epsilon": -135.291, "zeta": -77.251, "epsilon_zeta": -58.040, "bb_type": "BI", "chi": -158.270, "glyco_bond": "anti", "C5prime_xyz": [ -1.202, 8.703, 0.490 ], "P_xyz": [ 1.422, 8.650, 0.404 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.065, "theta": -130.009, "eta_prime": -165.118, "theta_prime": -123.140, "eta_base": -109.632, "theta_base": -78.221, "v0": 3.601, "v1": -23.561, "v2": 33.524, "v3": -32.318, "v4": 18.161, "amplitude": 34.369, "phase_angle": 12.734, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.561, "filter_rmsd": 0.073, "frame": { "rmsd": 0.016, "origin": [ 232.826, 226.529, 317.332 ], "x_axis": [ 0.754, 0.046, 0.655 ], "y_axis": [ -0.646, 0.232, 0.727 ], "z_axis": [ -0.118, -0.972, 0.204 ], "quaternion": [ 0.740, 0.574, -0.262, 0.234 ] } }, { "index": 588, "index_chain": 588, "chain_name": "a", "nt_resnum": 589, "nt_name": "A", "nt_code": "A", "nt_id": "///a/589", "linked_nts": [ "///a/588", "///a/590" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,multiplet", "alpha": -55.877, "beta": 163.167, "gamma": 75.708, "delta": 142.417, "epsilon": -138.345, "zeta": 167.497, "epsilon_zeta": 54.158, "bb_type": "BII", "chi": -95.953, "glyco_bond": "anti", "C5prime_xyz": [ -2.391, 7.882, -2.319 ], "P_xyz": [ 0.037, 7.962, -3.298 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -173.858, "theta": 150.135, "eta_prime": -134.233, "theta_prime": 124.672, "eta_base": -84.965, "theta_base": 145.626, "v0": -22.529, "v1": 34.318, "v2": -32.385, "v3": 20.186, "v4": 1.262, "amplitude": 34.650, "phase_angle": 159.169, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.473, "filter_rmsd": 0.041, "frame": { "rmsd": 0.016, "origin": [ 233.473, 224.595, 319.753 ], "x_axis": [ 0.250, 0.069, 0.966 ], "y_axis": [ -0.862, -0.438, 0.255 ], "z_axis": [ 0.440, -0.896, -0.050 ], "quaternion": [ 0.437, 0.659, -0.301, 0.533 ] } }, { "index": 589, "index_chain": 589, "chain_name": "a", "nt_resnum": 590, "nt_name": "A", "nt_code": "A", "nt_id": "///a/590", "linked_nts": [ "///a/589", "///a/591" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -84.242, "beta": 150.636, "gamma": 24.768, "delta": 81.262, "epsilon": -141.931, "zeta": -49.046, "epsilon_zeta": -92.885, "bb_type": "BI", "chi": -178.987, "glyco_bond": "anti", "C5prime_xyz": [ -1.227, 8.305, 1.646 ], "P_xyz": [ 1.184, 8.011, 2.614 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 148.558, "theta": -113.916, "eta_prime": 135.461, "theta_prime": -122.075, "eta_base": 158.247, "theta_base": -105.433, "v0": 5.209, "v1": -27.056, "v2": 37.415, "v3": -35.412, "v4": 19.046, "amplitude": 38.104, "phase_angle": 10.909, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.132, "filter_rmsd": 0.043, "frame": { "rmsd": 0.012, "origin": [ 232.397, 222.402, 313.479 ], "x_axis": [ 0.233, 0.168, 0.958 ], "y_axis": [ -0.958, -0.130, 0.256 ], "z_axis": [ 0.167, -0.977, 0.131 ], "quaternion": [ 0.555, 0.555, -0.356, 0.507 ] } }, { "index": 590, "index_chain": 590, "chain_name": "a", "nt_resnum": 591, "nt_name": "G", "nt_code": "G", "nt_id": "///a/591", "linked_nts": [ "///a/590", "///a/592" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -148.296, "beta": 150.206, "gamma": 142.048, "delta": 80.097, "epsilon": -116.344, "zeta": -53.602, "epsilon_zeta": -62.742, "bb_type": "--", "chi": -178.877, "glyco_bond": "anti", "C5prime_xyz": [ -1.280, 8.424, 1.614 ], "P_xyz": [ 0.198, 10.239, 0.470 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.488, "theta": -128.594, "eta_prime": 179.588, "theta_prime": -122.021, "eta_base": -141.417, "theta_base": -68.104, "v0": 4.150, "v1": -26.816, "v2": 38.157, "v3": -36.757, "v4": 20.542, "amplitude": 39.105, "phase_angle": 12.638, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 235.775, 220.529, 314.667 ], "x_axis": [ -0.264, 0.046, 0.963 ], "y_axis": [ -0.905, -0.357, -0.231 ], "z_axis": [ 0.334, -0.933, 0.136 ], "quaternion": [ 0.359, 0.489, -0.439, 0.663 ] } }, { "index": 591, "index_chain": 591, "chain_name": "a", "nt_resnum": 592, "nt_name": "U", "nt_code": "U", "nt_id": "///a/592", "linked_nts": [ "///a/591", "///a/593" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -70.502, "beta": 179.833, "gamma": 51.924, "delta": 82.157, "epsilon": -139.198, "zeta": -82.963, "epsilon_zeta": -56.234, "bb_type": "BI", "chi": -155.174, "glyco_bond": "anti", "C5prime_xyz": [ -1.539, 8.755, 0.247 ], "P_xyz": [ 0.998, 9.332, 0.584 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.049, "theta": -146.961, "eta_prime": -173.894, "theta_prime": -143.659, "eta_base": -99.282, "theta_base": -123.751, "v0": -0.051, "v1": -21.884, "v2": 34.342, "v3": -35.274, "v4": 22.276, "amplitude": 36.250, "phase_angle": 18.672, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.402, "filter_rmsd": 0.107, "frame": { "rmsd": 0.013, "origin": [ 233.235, 217.605, 319.370 ], "x_axis": [ -0.997, -0.064, 0.049 ], "y_axis": [ -0.022, -0.366, -0.930 ], "z_axis": [ 0.077, -0.929, 0.363 ], "quaternion": [ -0.012, 0.038, -0.563, 0.825 ] } }, { "index": 592, "index_chain": 592, "chain_name": "a", "nt_resnum": 593, "nt_name": "U", "nt_code": "U", "nt_id": "///a/593", "linked_nts": [ "///a/592", "///a/594" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -61.095, "beta": 165.472, "gamma": 55.935, "delta": 80.629, "epsilon": -144.941, "zeta": -73.813, "epsilon_zeta": -71.129, "bb_type": "BI", "chi": -150.582, "glyco_bond": "anti", "C5prime_xyz": [ -1.790, 8.788, -0.076 ], "P_xyz": [ 0.699, 9.462, -0.401 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.758, "theta": -142.337, "eta_prime": -179.904, "theta_prime": -142.162, "eta_base": -150.447, "theta_base": -111.326, "v0": -2.264, "v1": -21.071, "v2": 34.992, "v3": -37.265, "v4": 24.878, "amplitude": 37.719, "phase_angle": 21.920, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.855, "filter_rmsd": 0.102, "frame": { "rmsd": 0.014, "origin": [ 232.797, 214.504, 321.731 ], "x_axis": [ -0.898, -0.033, -0.438 ], "y_axis": [ 0.414, -0.399, -0.818 ], "z_axis": [ -0.148, -0.916, 0.372 ], "quaternion": [ -0.137, -0.179, -0.531, 0.817 ] } }, { "index": 593, "index_chain": 593, "chain_name": "a", "nt_resnum": 594, "nt_name": "G", "nt_code": "G", "nt_id": "///a/594", "linked_nts": [ "///a/593", "///a/595" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -64.806, "beta": 174.215, "gamma": 52.530, "delta": 76.049, "epsilon": -144.538, "zeta": -71.758, "epsilon_zeta": -72.780, "bb_type": "BI", "chi": -152.847, "glyco_bond": "anti", "C5prime_xyz": [ -1.464, 8.829, 0.066 ], "P_xyz": [ 1.076, 9.434, -0.114 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.454, "theta": -146.049, "eta_prime": 177.466, "theta_prime": -145.395, "eta_base": -138.012, "theta_base": -128.500, "v0": 1.788, "v1": -26.267, "v2": 39.539, "v3": -39.456, "v4": 23.716, "amplitude": 41.152, "phase_angle": 16.098, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.921, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 230.100, 210.953, 322.446 ], "x_axis": [ -0.394, -0.016, -0.919 ], "y_axis": [ 0.864, -0.348, -0.364 ], "z_axis": [ -0.314, -0.937, 0.151 ], "quaternion": [ -0.320, -0.448, -0.473, 0.688 ] } }, { "index": 594, "index_chain": 594, "chain_name": "a", "nt_resnum": 595, "nt_name": "G", "nt_code": "G", "nt_id": "///a/595", "linked_nts": [ "///a/594", "///a/596" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -66.636, "beta": 166.857, "gamma": 63.534, "delta": 76.335, "epsilon": -150.801, "zeta": -80.152, "epsilon_zeta": -70.649, "bb_type": "BI", "chi": -163.044, "glyco_bond": "anti", "C5prime_xyz": [ -1.979, 8.865, 0.612 ], "P_xyz": [ 0.434, 9.857, 0.485 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.229, "theta": -157.093, "eta_prime": -179.185, "theta_prime": -156.382, "eta_base": -148.987, "theta_base": -128.434, "v0": -4.391, "v1": -20.446, "v2": 36.019, "v3": -39.556, "v4": 27.673, "amplitude": 39.671, "phase_angle": 24.780, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.752, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 227.235, 208.590, 322.353 ], "x_axis": [ 0.106, 0.173, -0.979 ], "y_axis": [ 0.921, -0.388, 0.031 ], "z_axis": [ -0.375, -0.905, -0.201 ], "quaternion": [ 0.360, 0.651, 0.420, -0.520 ] } }, { "index": 595, "index_chain": 595, "chain_name": "a", "nt_resnum": 596, "nt_name": "A", "nt_code": "A", "nt_id": "///a/596", "linked_nts": [ "///a/595", "///a/597" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -59.149, "beta": 169.933, "gamma": 52.129, "delta": 81.210, "epsilon": -147.337, "zeta": -74.472, "epsilon_zeta": -72.865, "bb_type": "BI", "chi": -171.140, "glyco_bond": "anti", "C5prime_xyz": [ -1.619, 8.664, 1.161 ], "P_xyz": [ 0.848, 9.127, 1.917 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.511, "theta": -145.650, "eta_prime": -179.013, "theta_prime": -144.015, "eta_base": -140.556, "theta_base": -121.316, "v0": -2.260, "v1": -20.205, "v2": 33.697, "v3": -35.931, "v4": 24.080, "amplitude": 36.364, "phase_angle": 22.078, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.872, "filter_rmsd": 0.043, "frame": { "rmsd": 0.016, "origin": [ 224.685, 205.915, 320.716 ], "x_axis": [ 0.677, 0.233, -0.698 ], "y_axis": [ 0.729, -0.338, 0.595 ], "z_axis": [ -0.097, -0.912, -0.398 ], "quaternion": [ 0.485, 0.777, 0.309, -0.256 ] } }, { "index": 596, "index_chain": 596, "chain_name": "a", "nt_resnum": 597, "nt_name": "U", "nt_code": "U", "nt_id": "///a/597", "linked_nts": [ "///a/596", "///a/598" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -70.410, "beta": 169.520, "gamma": 62.529, "delta": 77.537, "epsilon": -147.126, "zeta": -73.681, "epsilon_zeta": -73.444, "bb_type": "BI", "chi": -154.316, "glyco_bond": "anti", "C5prime_xyz": [ -1.700, 8.803, 0.149 ], "P_xyz": [ 0.790, 9.468, -0.266 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.456, "theta": -147.311, "eta_prime": -179.150, "theta_prime": -148.718, "eta_base": -142.882, "theta_base": -121.285, "v0": -0.384, "v1": -23.546, "v2": 37.249, "v3": -38.392, "v4": 24.452, "amplitude": 39.417, "phase_angle": 19.093, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.826, "filter_rmsd": 0.105, "frame": { "rmsd": 0.009, "origin": [ 223.337, 203.795, 318.216 ], "x_axis": [ 0.911, -0.133, -0.391 ], "y_axis": [ 0.261, -0.548, 0.795 ], "z_axis": [ -0.320, -0.826, -0.464 ], "quaternion": [ 0.474, 0.855, 0.038, -0.208 ] } }, { "index": 597, "index_chain": 597, "chain_name": "a", "nt_resnum": 598, "nt_name": "G", "nt_code": "G", "nt_id": "///a/598", "linked_nts": [ "///a/597", "///a/599" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -68.079, "beta": 175.532, "gamma": 50.531, "delta": 76.699, "epsilon": -135.445, "zeta": -71.470, "epsilon_zeta": -63.976, "bb_type": "BI", "chi": -162.936, "glyco_bond": "anti", "C5prime_xyz": [ -1.410, 8.703, 0.677 ], "P_xyz": [ 1.131, 9.265, 0.863 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.416, "theta": -139.175, "eta_prime": 171.610, "theta_prime": -132.511, "eta_base": -147.164, "theta_base": -83.203, "v0": 4.195, "v1": -28.301, "v2": 40.333, "v3": -38.902, "v4": 21.867, "amplitude": 41.366, "phase_angle": 12.831, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.908, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 223.432, 201.211, 315.286 ], "x_axis": [ 0.950, -0.090, 0.301 ], "y_axis": [ -0.310, -0.414, 0.856 ], "z_axis": [ 0.047, -0.906, -0.421 ], "quaternion": [ 0.528, 0.834, -0.120, 0.104 ] } }, { "index": 598, "index_chain": 598, "chain_name": "a", "nt_resnum": 599, "nt_name": "U", "nt_code": "U", "nt_id": "///a/599", "linked_nts": [ "///a/598", "///a/600" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -69.469, "beta": 156.004, "gamma": 82.933, "delta": 82.103, "epsilon": -139.651, "zeta": -69.249, "epsilon_zeta": -70.402, "bb_type": "BI", "chi": -141.676, "glyco_bond": "anti", "C5prime_xyz": [ -1.635, 8.696, -0.582 ], "P_xyz": [ 0.553, 8.902, -2.012 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.630, "theta": -135.220, "eta_prime": -161.639, "theta_prime": -139.665, "eta_base": -99.272, "theta_base": -116.807, "v0": 1.867, "v1": -23.839, "v2": 35.444, "v3": -35.292, "v4": 21.168, "amplitude": 36.826, "phase_angle": 15.744, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.052, "filter_rmsd": 0.106, "frame": { "rmsd": 0.013, "origin": [ 226.292, 199.122, 315.200 ], "x_axis": [ 0.584, -0.484, 0.651 ], "y_axis": [ -0.747, -0.635, 0.198 ], "z_axis": [ 0.318, -0.602, -0.733 ], "quaternion": [ 0.233, 0.859, -0.358, 0.282 ] } }, { "index": 599, "index_chain": 599, "chain_name": "a", "nt_resnum": 600, "nt_name": "G", "nt_code": "G", "nt_id": "///a/600", "linked_nts": [ "///a/599", "///a/601" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -74.018, "beta": 171.107, "gamma": 66.278, "delta": 78.992, "epsilon": -144.677, "zeta": 83.646, "epsilon_zeta": 131.677, "bb_type": "--", "chi": -142.988, "glyco_bond": "anti", "C5prime_xyz": [ -1.891, 8.827, -0.565 ], "P_xyz": [ 0.478, 9.574, -1.353 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.919, "theta": 3.344, "eta_prime": -176.352, "theta_prime": -4.414, "eta_base": -139.088, "theta_base": -104.241, "v0": -3.709, "v1": -20.048, "v2": 34.723, "v3": -37.847, "v4": 26.226, "amplitude": 38.030, "phase_angle": 24.069, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.677, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 228.850, 195.698, 314.139 ], "x_axis": [ -0.025, -0.503, 0.864 ], "y_axis": [ -0.881, -0.398, -0.257 ], "z_axis": [ 0.473, -0.767, -0.433 ], "quaternion": [ 0.190, 0.672, -0.515, 0.498 ] } }, { "index": 600, "index_chain": 600, "chain_name": "a", "nt_resnum": 601, "nt_name": "A", "nt_code": "A", "nt_id": "///a/601", "linked_nts": [ "///a/600", "///a/602" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -106.529, "beta": -154.364, "gamma": 103.824, "delta": 80.201, "epsilon": -114.798, "zeta": -93.287, "epsilon_zeta": -21.511, "bb_type": "--", "chi": -176.708, "glyco_bond": "anti", "C5prime_xyz": [ -1.500, 8.505, 1.477 ], "P_xyz": [ 1.088, 8.834, 1.481 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -125.865, "theta": -136.792, "eta_prime": -90.834, "theta_prime": -134.670, "eta_base": 21.438, "theta_base": -93.418, "v0": 1.374, "v1": -24.110, "v2": 36.367, "v3": -36.566, "v4": 22.268, "amplitude": 37.947, "phase_angle": 16.593, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.044, "frame": { "rmsd": 0.014, "origin": [ 219.393, 183.706, 304.079 ], "x_axis": [ 0.416, 0.410, -0.812 ], "y_axis": [ 0.239, 0.812, 0.533 ], "z_axis": [ 0.877, -0.416, 0.240 ], "quaternion": [ 0.786, 0.302, 0.537, 0.054 ] } }, { "index": 601, "index_chain": 601, "chain_name": "a", "nt_resnum": 602, "nt_name": "A", "nt_code": "A", "nt_id": "///a/602", "linked_nts": [ "///a/601", "///a/603" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -60.227, "beta": 149.613, "gamma": 55.989, "delta": 80.532, "epsilon": -131.553, "zeta": -63.323, "epsilon_zeta": -68.230, "bb_type": "BI", "chi": -166.886, "glyco_bond": "anti", "C5prime_xyz": [ -1.175, 8.548, 0.904 ], "P_xyz": [ 1.396, 8.568, 0.478 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.172, "theta": -121.433, "eta_prime": 176.155, "theta_prime": -122.567, "eta_base": -125.150, "theta_base": -90.552, "v0": 4.531, "v1": -27.072, "v2": 38.230, "v3": -36.578, "v4": 20.202, "amplitude": 39.095, "phase_angle": 12.079, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.273, "filter_rmsd": 0.042, "frame": { "rmsd": 0.016, "origin": [ 223.234, 182.996, 303.377 ], "x_axis": [ 0.367, 0.908, -0.201 ], "y_axis": [ -0.044, 0.233, 0.971 ], "z_axis": [ 0.929, -0.348, 0.125 ], "quaternion": [ 0.657, 0.502, 0.430, 0.362 ] } }, { "index": 602, "index_chain": 602, "chain_name": "a", "nt_resnum": 603, "nt_name": "A", "nt_code": "A", "nt_id": "///a/603", "linked_nts": [ "///a/602", "///a/604" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -76.350, "beta": 158.133, "gamma": 81.612, "delta": 78.543, "epsilon": -132.014, "zeta": -56.938, "epsilon_zeta": -75.075, "bb_type": "BI", "chi": -176.246, "glyco_bond": "anti", "C5prime_xyz": [ -1.567, 8.513, 1.442 ], "P_xyz": [ 0.888, 9.297, 1.014 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.523, "theta": -121.065, "eta_prime": -167.599, "theta_prime": -120.361, "eta_base": -108.436, "theta_base": -75.413, "v0": 1.306, "v1": -24.723, "v2": 37.452, "v3": -37.641, "v4": 22.927, "amplitude": 39.097, "phase_angle": 16.681, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.073, "filter_rmsd": 0.042, "frame": { "rmsd": 0.019, "origin": [ 227.594, 184.874, 302.803 ], "x_axis": [ 0.134, 0.843, 0.521 ], "y_axis": [ -0.254, -0.479, 0.840 ], "z_axis": [ 0.958, -0.245, 0.150 ], "quaternion": [ 0.449, 0.605, 0.243, 0.611 ] } }, { "index": 603, "index_chain": 603, "chain_name": "a", "nt_resnum": 604, "nt_name": "U", "nt_code": "U", "nt_id": "///a/604", "linked_nts": [ "///a/603", "///a/605" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -72.068, "beta": 179.037, "gamma": 56.735, "delta": 81.190, "epsilon": -132.336, "zeta": -75.621, "epsilon_zeta": -56.715, "bb_type": "BI", "chi": -163.227, "glyco_bond": "anti", "C5prime_xyz": [ -1.469, 8.724, 0.736 ], "P_xyz": [ 1.056, 9.228, 1.191 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.914, "theta": -134.884, "eta_prime": -170.860, "theta_prime": -129.445, "eta_base": -103.851, "theta_base": -90.558, "v0": 0.765, "v1": -23.309, "v2": 35.708, "v3": -36.153, "v4": 22.330, "amplitude": 37.418, "phase_angle": 17.385, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.736, "filter_rmsd": 0.105, "frame": { "rmsd": 0.012, "origin": [ 231.224, 187.205, 306.240 ], "x_axis": [ -0.349, 0.037, 0.936 ], "y_axis": [ -0.206, -0.978, -0.039 ], "z_axis": [ 0.914, -0.207, 0.349 ], "quaternion": [ 0.074, 0.566, -0.075, 0.818 ] } }, { "index": 604, "index_chain": 604, "chain_name": "a", "nt_resnum": 605, "nt_name": "C", "nt_code": "C", "nt_id": "///a/605", "linked_nts": [ "///a/604", "///a/606" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -60.126, "beta": 167.983, "gamma": 55.159, "delta": 80.410, "epsilon": -128.646, "zeta": -69.264, "epsilon_zeta": -59.382, "bb_type": "BI", "chi": -151.382, "glyco_bond": "anti", "C5prime_xyz": [ -1.491, 8.797, 0.007 ], "P_xyz": [ 1.071, 9.226, -0.222 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.420, "theta": -126.376, "eta_prime": -172.464, "theta_prime": -125.552, "eta_base": -122.304, "theta_base": -96.426, "v0": 0.473, "v1": -23.026, "v2": 35.594, "v3": -36.270, "v4": 22.593, "amplitude": 37.403, "phase_angle": 17.892, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.833, "filter_rmsd": 0.066, "frame": { "rmsd": 0.011, "origin": [ 233.707, 186.553, 309.946 ], "x_axis": [ -0.509, -0.620, 0.597 ], "y_axis": [ 0.191, -0.758, -0.624 ], "z_axis": [ 0.839, -0.203, 0.504 ], "quaternion": [ -0.244, 0.431, -0.249, 0.832 ] } }, { "index": 605, "index_chain": 605, "chain_name": "a", "nt_resnum": 606, "nt_name": "C", "nt_code": "C", "nt_id": "///a/606", "linked_nts": [ "///a/605", "///a/607" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -70.944, "beta": 169.182, "gamma": 64.112, "delta": 75.558, "epsilon": -143.439, "zeta": -72.458, "epsilon_zeta": -70.981, "bb_type": "BI", "chi": -155.945, "glyco_bond": "anti", "C5prime_xyz": [ -1.787, 8.928, 0.204 ], "P_xyz": [ 0.625, 9.820, -0.203 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.278, "theta": -145.991, "eta_prime": -179.448, "theta_prime": -143.269, "eta_base": -133.902, "theta_base": -110.637, "v0": -3.891, "v1": -21.481, "v2": 37.179, "v3": -40.373, "v4": 27.853, "amplitude": 40.656, "phase_angle": 23.871, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.638, "filter_rmsd": 0.062, "frame": { "rmsd": 0.011, "origin": [ 235.095, 183.695, 313.712 ], "x_axis": [ -0.597, -0.788, -0.153 ], "y_axis": [ 0.527, -0.241, -0.815 ], "z_axis": [ 0.605, -0.567, 0.559 ], "quaternion": [ -0.424, 0.146, -0.446, 0.774 ] } }, { "index": 606, "index_chain": 606, "chain_name": "a", "nt_resnum": 607, "nt_name": "C", "nt_code": "C", "nt_id": "///a/607", "linked_nts": [ "///a/606", "///a/608" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -79.507, "beta": 173.867, "gamma": 72.066, "delta": 77.541, "epsilon": -136.613, "zeta": -77.230, "epsilon_zeta": -59.383, "bb_type": "BI", "chi": -149.624, "glyco_bond": "anti", "C5prime_xyz": [ -1.662, 8.863, -0.132 ], "P_xyz": [ 0.772, 9.445, -0.873 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.703, "theta": -143.773, "eta_prime": -177.272, "theta_prime": -145.173, "eta_base": -133.843, "theta_base": -120.445, "v0": -0.582, "v1": -24.053, "v2": 38.177, "v3": -39.469, "v4": 25.190, "amplitude": 40.455, "phase_angle": 19.318, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.393, "filter_rmsd": 0.069, "frame": { "rmsd": 0.013, "origin": [ 235.588, 179.862, 315.740 ], "x_axis": [ -0.260, -0.671, -0.695 ], "y_axis": [ 0.867, 0.154, -0.473 ], "z_axis": [ 0.424, -0.726, 0.542 ], "quaternion": [ 0.599, 0.105, 0.467, -0.642 ] } }, { "index": 607, "index_chain": 607, "chain_name": "a", "nt_resnum": 608, "nt_name": "C", "nt_code": "C", "nt_id": "///a/608", "linked_nts": [ "///a/607", "///a/609" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -76.940, "beta": 162.127, "gamma": 74.753, "delta": 75.199, "epsilon": -149.479, "zeta": -23.546, "epsilon_zeta": -125.933, "bb_type": "--", "chi": -163.015, "glyco_bond": "anti", "C5prime_xyz": [ -1.496, 8.888, 0.635 ], "P_xyz": [ 0.952, 9.576, 0.029 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.833, "theta": -117.630, "eta_prime": 177.253, "theta_prime": -135.545, "eta_base": -142.685, "theta_base": -124.417, "v0": -1.631, "v1": -23.699, "v2": 38.643, "v3": -40.517, "v4": 26.615, "amplitude": 41.324, "phase_angle": 20.752, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.289, "filter_rmsd": 0.068, "frame": { "rmsd": 0.012, "origin": [ 236.077, 175.732, 316.607 ], "x_axis": [ 0.064, -0.166, -0.984 ], "y_axis": [ 0.905, 0.424, -0.012 ], "z_axis": [ 0.420, -0.890, 0.177 ], "quaternion": [ 0.645, 0.340, 0.544, -0.415 ] } }, { "index": 608, "index_chain": 608, "chain_name": "a", "nt_resnum": 609, "nt_name": "G", "nt_code": "G", "nt_id": "///a/609", "linked_nts": [ "///a/608", "///a/610" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -147.091, "beta": 114.141, "gamma": 157.769, "delta": 78.373, "epsilon": -134.287, "zeta": -67.641, "epsilon_zeta": -66.645, "bb_type": "BI", "chi": -179.177, "glyco_bond": "anti", "C5prime_xyz": [ -1.302, 8.436, 1.610 ], "P_xyz": [ -1.020, 10.707, 0.320 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.494, "theta": -178.743, "eta_prime": 176.850, "theta_prime": -166.301, "eta_base": -149.722, "theta_base": -126.672, "v0": 5.007, "v1": -28.371, "v2": 39.794, "v3": -37.828, "v4": 20.658, "amplitude": 40.621, "phase_angle": 11.585, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 235.018, 172.112, 315.420 ], "x_axis": [ 0.323, 0.097, -0.941 ], "y_axis": [ 0.883, 0.328, 0.337 ], "z_axis": [ 0.341, -0.940, 0.020 ], "quaternion": [ 0.646, 0.494, 0.496, -0.304 ] } }, { "index": 609, "index_chain": 609, "chain_name": "a", "nt_resnum": 610, "nt_name": "G", "nt_code": "G", "nt_id": "///a/610", "linked_nts": [ "///a/609", "///a/611" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -67.029, "beta": 174.261, "gamma": 60.247, "delta": 77.720, "epsilon": -158.146, "zeta": -75.527, "epsilon_zeta": -82.619, "bb_type": "BI", "chi": -170.443, "glyco_bond": "anti", "C5prime_xyz": [ -1.666, 8.758, 1.078 ], "P_xyz": [ 0.827, 9.476, 1.410 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.887, "theta": -133.247, "eta_prime": -174.799, "theta_prime": -142.997, "eta_base": -122.472, "theta_base": -119.065, "v0": -1.380, "v1": -22.795, "v2": 36.819, "v3": -38.622, "v4": 25.248, "amplitude": 39.319, "phase_angle": 20.539, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.820, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 235.348, 168.941, 312.705 ], "x_axis": [ 0.776, 0.379, -0.504 ], "y_axis": [ 0.487, 0.149, 0.861 ], "z_axis": [ 0.402, -0.913, -0.069 ], "quaternion": [ 0.681, 0.651, 0.332, -0.039 ] } }, { "index": 610, "index_chain": 610, "chain_name": "a", "nt_resnum": 611, "nt_name": "G", "nt_code": "G", "nt_id": "///a/611", "linked_nts": [ "///a/610", "///a/612" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 171.166, "beta": -171.577, "gamma": 157.727, "delta": 80.940, "epsilon": -123.843, "zeta": -78.786, "epsilon_zeta": -45.056, "bb_type": "--", "chi": 179.908, "glyco_bond": "anti", "C5prime_xyz": [ -1.113, 8.340, 1.682 ], "P_xyz": [ 0.803, 9.849, 0.743 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.532, "theta": -153.310, "eta_prime": 169.022, "theta_prime": -152.251, "eta_base": -148.213, "theta_base": -149.859, "v0": 6.118, "v1": -28.192, "v2": 38.476, "v3": -35.938, "v4": 18.794, "amplitude": 39.044, "phase_angle": 9.784, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.268, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 236.441, 166.470, 310.051 ], "x_axis": [ 0.851, 0.519, 0.079 ], "y_axis": [ 0.022, -0.185, 0.982 ], "z_axis": [ 0.524, -0.835, -0.169 ], "quaternion": [ 0.612, 0.743, 0.182, 0.203 ] } }, { "index": 611, "index_chain": 611, "chain_name": "a", "nt_resnum": 612, "nt_name": "C", "nt_code": "C", "nt_id": "///a/612", "linked_nts": [ "///a/611", "///a/613" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": -60.670, "beta": 177.900, "gamma": 52.024, "delta": 78.381, "epsilon": -174.895, "zeta": 40.423, "epsilon_zeta": 144.682, "bb_type": "--", "chi": -152.270, "glyco_bond": "anti", "C5prime_xyz": [ -2.025, 9.002, -0.103 ], "P_xyz": [ 0.212, 10.310, 0.109 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.917, "theta": -29.913, "eta_prime": -178.312, "theta_prime": -84.091, "eta_base": -166.568, "theta_base": -136.828, "v0": -10.959, "v1": -12.663, "v2": 29.711, "v3": -37.006, "v4": 30.332, "amplitude": 36.572, "phase_angle": 35.669, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.643, "filter_rmsd": 0.058, "frame": { "rmsd": 0.013, "origin": [ 237.823, 164.803, 306.413 ], "x_axis": [ 0.631, 0.624, 0.460 ], "y_axis": [ -0.140, -0.493, 0.859 ], "z_axis": [ 0.763, -0.607, -0.224 ], "quaternion": [ 0.478, 0.766, 0.158, 0.399 ] } }, { "index": 612, "index_chain": 612, "chain_name": "a", "nt_resnum": 613, "nt_name": "U", "nt_code": "U", "nt_id": "///a/613", "linked_nts": [ "///a/612", "///a/614" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": 89.389, "beta": 137.446, "gamma": 41.384, "delta": 80.479, "epsilon": -111.744, "zeta": -101.744, "epsilon_zeta": -10.000, "bb_type": "--", "chi": -156.567, "glyco_bond": "anti", "C5prime_xyz": [ -1.700, 8.823, 0.270 ], "P_xyz": [ 0.903, 9.082, 0.181 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -44.660, "theta": -139.014, "eta_prime": 16.990, "theta_prime": -132.737, "eta_base": 52.183, "theta_base": -108.415, "v0": -2.623, "v1": -20.103, "v2": 33.801, "v3": -36.295, "v4": 24.511, "amplitude": 36.615, "phase_angle": 22.611, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "5d", "suiteness": 0.391, "filter_rmsd": 0.100, "frame": { "rmsd": 0.010, "origin": [ 244.568, 153.675, 305.215 ], "x_axis": [ -0.683, -0.124, -0.720 ], "y_axis": [ -0.720, 0.284, 0.633 ], "z_axis": [ 0.126, 0.951, -0.283 ], "quaternion": [ 0.282, -0.281, 0.750, 0.528 ] } }, { "index": 613, "index_chain": 613, "chain_name": "a", "nt_resnum": 614, "nt_name": "C", "nt_code": "C", "nt_id": "///a/614", "linked_nts": [ "///a/613", "///a/615" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -64.636, "beta": 158.322, "gamma": 66.240, "delta": 83.050, "epsilon": -121.845, "zeta": -79.784, "epsilon_zeta": -42.061, "bb_type": "--", "chi": -155.041, "glyco_bond": "anti", "C5prime_xyz": [ -1.474, 8.829, 0.222 ], "P_xyz": [ 1.077, 9.142, -0.184 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.115, "theta": -126.965, "eta_prime": -172.505, "theta_prime": -125.642, "eta_base": -144.448, "theta_base": -87.560, "v0": -1.772, "v1": -20.168, "v2": 33.147, "v3": -35.082, "v4": 23.278, "amplitude": 35.600, "phase_angle": 21.392, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.130, "filter_rmsd": 0.064, "frame": { "rmsd": 0.012, "origin": [ 243.320, 159.165, 302.465 ], "x_axis": [ -0.908, -0.412, -0.076 ], "y_axis": [ -0.159, 0.171, 0.972 ], "z_axis": [ -0.388, 0.895, -0.221 ], "quaternion": [ -0.103, -0.188, 0.758, 0.616 ] } }, { "index": 614, "index_chain": 614, "chain_name": "a", "nt_resnum": 615, "nt_name": "A", "nt_code": "A", "nt_id": "///a/615", "linked_nts": [ "///a/614", "///a/616" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -54.306, "beta": 152.259, "gamma": 58.475, "delta": 78.619, "epsilon": -143.063, "zeta": -62.111, "epsilon_zeta": -80.952, "bb_type": "BI", "chi": -149.929, "glyco_bond": "anti", "C5prime_xyz": [ -1.691, 8.822, -0.128 ], "P_xyz": [ 0.784, 9.305, -0.786 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.922, "theta": -133.323, "eta_prime": -173.736, "theta_prime": -139.585, "eta_base": -118.613, "theta_base": -107.473, "v0": -3.066, "v1": -20.799, "v2": 35.398, "v3": -38.102, "v4": 26.008, "amplitude": 38.472, "phase_angle": 23.060, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.494, "filter_rmsd": 0.041, "frame": { "rmsd": 0.013, "origin": [ 239.131, 161.196, 302.405 ], "x_axis": [ -0.662, -0.368, 0.653 ], "y_axis": [ 0.423, 0.535, 0.731 ], "z_axis": [ -0.618, 0.760, -0.199 ], "quaternion": [ -0.411, 0.018, 0.774, 0.482 ] } }, { "index": 615, "index_chain": 615, "chain_name": "a", "nt_resnum": 616, "nt_name": "A", "nt_code": "A", "nt_id": "///a/616", "linked_nts": [ "///a/615", "///a/617" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": -106.202, "beta": 158.030, "gamma": 93.240, "delta": 78.401, "epsilon": -129.864, "zeta": -38.154, "epsilon_zeta": -91.710, "bb_type": "--", "chi": -168.401, "glyco_bond": "anti", "C5prime_xyz": [ -1.546, 8.635, 0.953 ], "P_xyz": [ 0.657, 9.514, -0.131 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.053, "theta": -102.467, "eta_prime": 173.560, "theta_prime": -100.050, "eta_base": -134.461, "theta_base": -54.578, "v0": 0.725, "v1": -24.522, "v2": 37.719, "v3": -38.215, "v4": 23.660, "amplitude": 39.552, "phase_angle": 17.512, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.017, "origin": [ 235.667, 162.638, 303.134 ], "x_axis": [ -0.088, -0.205, 0.975 ], "y_axis": [ 0.635, 0.743, 0.213 ], "z_axis": [ -0.768, 0.637, 0.065 ], "quaternion": [ 0.656, -0.162, -0.664, -0.320 ] } }, { "index": 616, "index_chain": 616, "chain_name": "a", "nt_resnum": 617, "nt_name": "C", "nt_code": "C", "nt_id": "///a/617", "linked_nts": [ "///a/616", "///a/618" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -87.584, "beta": 179.827, "gamma": 68.182, "delta": 81.244, "epsilon": -148.746, "zeta": -64.621, "epsilon_zeta": -84.125, "bb_type": "BI", "chi": -167.872, "glyco_bond": "anti", "C5prime_xyz": [ -1.161, 8.671, 1.004 ], "P_xyz": [ 1.467, 8.830, 1.175 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.538, "theta": -136.249, "eta_prime": -165.982, "theta_prime": -137.331, "eta_base": -87.103, "theta_base": -106.947, "v0": 3.431, "v1": -25.973, "v2": 37.506, "v3": -36.313, "v4": 20.744, "amplitude": 38.567, "phase_angle": 13.472, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.155, "filter_rmsd": 0.077, "frame": { "rmsd": 0.020, "origin": [ 236.569, 166.829, 310.234 ], "x_axis": [ 0.803, 0.573, 0.161 ], "y_axis": [ -0.029, 0.307, -0.951 ], "z_axis": [ -0.595, 0.759, 0.264 ], "quaternion": [ 0.770, -0.555, -0.245, 0.195 ] } }, { "index": 617, "index_chain": 617, "chain_name": "a", "nt_resnum": 618, "nt_name": "C", "nt_code": "C", "nt_id": "///a/618", "linked_nts": [ "///a/617", "///a/619" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -79.965, "beta": 174.615, "gamma": 66.277, "delta": 78.654, "epsilon": -140.385, "zeta": -67.664, "epsilon_zeta": -72.721, "bb_type": "BI", "chi": -167.677, "glyco_bond": "anti", "C5prime_xyz": [ -1.301, 8.734, 0.963 ], "P_xyz": [ 1.273, 9.145, 1.072 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.224, "theta": -136.628, "eta_prime": -178.817, "theta_prime": -135.561, "eta_base": -129.389, "theta_base": -100.774, "v0": 1.105, "v1": -24.913, "v2": 37.931, "v3": -38.238, "v4": 23.396, "amplitude": 39.657, "phase_angle": 16.966, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.616, "filter_rmsd": 0.067, "frame": { "rmsd": 0.011, "origin": [ 235.914, 169.685, 312.418 ], "x_axis": [ 0.670, 0.563, -0.484 ], "y_axis": [ -0.547, -0.067, -0.835 ], "z_axis": [ -0.502, 0.824, 0.263 ], "quaternion": [ 0.683, -0.607, -0.007, 0.406 ] } }, { "index": 618, "index_chain": 618, "chain_name": "a", "nt_resnum": 619, "nt_name": "U", "nt_code": "U", "nt_id": "///a/619", "linked_nts": [ "///a/618", "///a/620" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -69.747, "beta": 166.105, "gamma": 66.579, "delta": 79.298, "epsilon": -157.079, "zeta": -94.414, "epsilon_zeta": -62.665, "bb_type": "BI", "chi": -158.564, "glyco_bond": "anti", "C5prime_xyz": [ -1.634, 8.813, 0.395 ], "P_xyz": [ 0.853, 9.474, 0.041 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.899, "theta": -174.500, "eta_prime": -174.167, "theta_prime": -174.741, "eta_base": -120.210, "theta_base": -166.083, "v0": -2.882, "v1": -20.885, "v2": 35.262, "v3": -37.919, "v4": 25.710, "amplitude": 38.252, "phase_angle": 22.803, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.676, "filter_rmsd": 0.102, "frame": { "rmsd": 0.012, "origin": [ 236.427, 172.984, 313.027 ], "x_axis": [ 0.224, 0.411, -0.883 ], "y_axis": [ -0.920, -0.210, -0.331 ], "z_axis": [ -0.322, 0.887, 0.331 ], "quaternion": [ 0.580, -0.525, 0.242, 0.574 ] } }, { "index": 619, "index_chain": 619, "chain_name": "a", "nt_resnum": 620, "nt_name": "G", "nt_code": "G", "nt_id": "///a/620", "linked_nts": [ "///a/619", "///a/621" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -75.329, "beta": 170.895, "gamma": 68.775, "delta": 82.562, "epsilon": -145.919, "zeta": -64.363, "epsilon_zeta": -81.556, "bb_type": "BI", "chi": -176.718, "glyco_bond": "anti", "C5prime_xyz": [ -1.513, 8.571, 1.487 ], "P_xyz": [ 1.039, 8.961, 1.862 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.359, "theta": -131.434, "eta_prime": 175.644, "theta_prime": -134.917, "eta_base": -172.695, "theta_base": -98.550, "v0": 0.428, "v1": -22.760, "v2": 35.088, "v3": -35.778, "v4": 22.280, "amplitude": 36.872, "phase_angle": 17.896, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.414, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 236.220, 176.498, 317.335 ], "x_axis": [ 0.162, 0.057, -0.985 ], "y_axis": [ -0.871, -0.461, -0.170 ], "z_axis": [ -0.464, 0.886, -0.026 ], "quaternion": [ -0.411, 0.642, -0.317, -0.564 ] } }, { "index": 620, "index_chain": 620, "chain_name": "a", "nt_resnum": 621, "nt_name": "G", "nt_code": "G", "nt_id": "///a/621", "linked_nts": [ "///a/620", "///a/622" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -101.722, "beta": -177.889, "gamma": 72.131, "delta": 80.723, "epsilon": -153.262, "zeta": -70.389, "epsilon_zeta": -82.873, "bb_type": "BI", "chi": -174.649, "glyco_bond": "anti", "C5prime_xyz": [ -1.365, 8.593, 1.343 ], "P_xyz": [ 1.205, 9.023, 1.621 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.233, "theta": -146.496, "eta_prime": 170.802, "theta_prime": -145.744, "eta_base": -130.302, "theta_base": -122.715, "v0": 1.419, "v1": -24.319, "v2": 36.651, "v3": -36.731, "v4": 22.291, "amplitude": 38.214, "phase_angle": 16.439, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.079, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 235.851, 179.945, 315.864 ], "x_axis": [ -0.405, -0.451, -0.795 ], "y_axis": [ -0.724, -0.373, 0.580 ], "z_axis": [ -0.558, 0.811, -0.176 ], "quaternion": [ 0.108, -0.535, 0.549, 0.633 ] } }, { "index": 621, "index_chain": 621, "chain_name": "a", "nt_resnum": 622, "nt_name": "G", "nt_code": "G", "nt_id": "///a/622", "linked_nts": [ "///a/621", "///a/623" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -71.963, "beta": 169.289, "gamma": 71.429, "delta": 82.045, "epsilon": -150.416, "zeta": -72.948, "epsilon_zeta": -77.469, "bb_type": "BI", "chi": -170.582, "glyco_bond": "anti", "C5prime_xyz": [ -1.524, 8.699, 1.110 ], "P_xyz": [ 1.054, 9.193, 1.165 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.188, "theta": -145.961, "eta_prime": -168.555, "theta_prime": -146.456, "eta_base": -129.662, "theta_base": -109.902, "v0": -0.751, "v1": -21.603, "v2": 34.347, "v3": -35.708, "v4": 23.031, "amplitude": 36.486, "phase_angle": 19.718, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.475, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 235.264, 183.051, 313.606 ], "x_axis": [ -0.774, -0.494, -0.396 ], "y_axis": [ -0.416, -0.074, 0.906 ], "z_axis": [ -0.477, 0.866, -0.148 ], "quaternion": [ -0.030, -0.335, 0.680, 0.652 ] } }, { "index": 622, "index_chain": 622, "chain_name": "a", "nt_resnum": 623, "nt_name": "A", "nt_code": "A", "nt_id": "///a/623", "linked_nts": [ "///a/622", "///a/624" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -78.406, "beta": 164.969, "gamma": 71.132, "delta": 85.914, "epsilon": -140.445, "zeta": -63.824, "epsilon_zeta": -76.620, "bb_type": "BI", "chi": -164.422, "glyco_bond": "anti", "C5prime_xyz": [ -1.229, 8.552, 0.794 ], "P_xyz": [ 1.348, 8.725, 0.361 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.372, "theta": -125.186, "eta_prime": -174.329, "theta_prime": -126.356, "eta_base": -120.501, "theta_base": -83.061, "v0": 4.574, "v1": -24.820, "v2": 34.546, "v3": -32.783, "v4": 17.856, "amplitude": 35.229, "phase_angle": 11.300, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.445, "filter_rmsd": 0.039, "frame": { "rmsd": 0.015, "origin": [ 233.199, 185.518, 312.040 ], "x_axis": [ -0.931, -0.277, 0.238 ], "y_axis": [ 0.146, 0.316, 0.938 ], "z_axis": [ -0.335, 0.908, -0.254 ], "quaternion": [ -0.181, -0.041, 0.791, 0.583 ] } }, { "index": 623, "index_chain": 623, "chain_name": "a", "nt_resnum": 624, "nt_name": "A", "nt_code": "A", "nt_id": "///a/624", "linked_nts": [ "///a/623", "///a/625" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -70.774, "beta": 165.610, "gamma": 63.080, "delta": 80.706, "epsilon": -133.703, "zeta": -85.992, "epsilon_zeta": -47.711, "bb_type": "BI", "chi": -161.140, "glyco_bond": "anti", "C5prime_xyz": [ -1.206, 8.604, 0.605 ], "P_xyz": [ 1.382, 8.827, 0.254 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.943, "theta": -142.603, "eta_prime": -171.487, "theta_prime": -140.362, "eta_base": -104.215, "theta_base": -115.109, "v0": 5.513, "v1": -27.619, "v2": 38.160, "v3": -35.957, "v4": 19.219, "amplitude": 38.827, "phase_angle": 10.631, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.773, "filter_rmsd": 0.036, "frame": { "rmsd": 0.014, "origin": [ 229.307, 187.765, 312.500 ], "x_axis": [ -0.464, 0.073, 0.883 ], "y_axis": [ 0.775, 0.516, 0.365 ], "z_axis": [ -0.429, 0.853, -0.296 ], "quaternion": [ -0.435, 0.281, 0.754, 0.404 ] } }, { "index": 624, "index_chain": 624, "chain_name": "a", "nt_resnum": 625, "nt_name": "C", "nt_code": "C", "nt_id": "///a/625", "linked_nts": [ "///a/624", "///a/626" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -48.829, "beta": 158.017, "gamma": 53.957, "delta": 79.523, "epsilon": -162.749, "zeta": 110.101, "epsilon_zeta": 87.150, "bb_type": "--", "chi": -155.507, "glyco_bond": "anti", "C5prime_xyz": [ -1.475, 8.814, 0.266 ], "P_xyz": [ 1.097, 9.155, 0.002 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.740, "theta": 29.831, "eta_prime": -173.475, "theta_prime": 35.335, "eta_base": -132.117, "theta_base": 63.265, "v0": 0.976, "v1": -24.176, "v2": 36.887, "v3": -37.316, "v4": 22.927, "amplitude": 38.609, "phase_angle": 17.176, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.612, "filter_rmsd": 0.066, "frame": { "rmsd": 0.013, "origin": [ 226.378, 190.256, 312.532 ], "x_axis": [ 0.093, 0.217, 0.972 ], "y_axis": [ 0.839, 0.508, -0.194 ], "z_axis": [ -0.536, 0.833, -0.135 ], "quaternion": [ 0.605, -0.424, -0.622, -0.257 ] } }, { "index": 625, "index_chain": 625, "chain_name": "a", "nt_resnum": 626, "nt_name": "U", "nt_code": "U", "nt_id": "///a/626", "linked_nts": [ "///a/625", "///a/627" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": -70.698, "beta": 129.453, "gamma": 71.420, "delta": 84.644, "epsilon": -144.307, "zeta": 59.008, "epsilon_zeta": 156.684, "bb_type": "--", "chi": -161.783, "glyco_bond": "anti", "C5prime_xyz": [ -1.306, 8.695, 0.656 ], "P_xyz": [ 1.107, 8.574, -0.361 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.928, "theta": -9.363, "eta_prime": -137.517, "theta_prime": -13.370, "eta_base": -134.055, "theta_base": -14.370, "v0": 1.389, "v1": -22.086, "v2": 33.177, "v3": -33.296, "v4": 20.134, "amplitude": 34.575, "phase_angle": 16.350, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "9a", "suiteness": 0.211, "filter_rmsd": 0.113, "frame": { "rmsd": 0.012, "origin": [ 236.103, 199.391, 302.185 ], "x_axis": [ -0.711, -0.190, -0.677 ], "y_axis": [ -0.640, -0.223, 0.735 ], "z_axis": [ -0.291, 0.956, 0.037 ], "quaternion": [ 0.160, -0.345, 0.602, 0.702 ] } }, { "index": 626, "index_chain": 626, "chain_name": "a", "nt_resnum": 627, "nt_name": "G", "nt_code": "G", "nt_id": "///a/627", "linked_nts": [ "///a/626", "///a/628" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end,stem-end", "alpha": -112.796, "beta": 162.544, "gamma": 82.304, "delta": 76.690, "epsilon": -115.895, "zeta": -87.139, "epsilon_zeta": -28.755, "bb_type": "--", "chi": -171.584, "glyco_bond": "anti", "C5prime_xyz": [ -1.399, 8.638, 1.188 ], "P_xyz": [ 1.059, 9.307, 0.588 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.802, "theta": -138.604, "eta_prime": -143.024, "theta_prime": -137.011, "eta_base": -91.229, "theta_base": -99.996, "v0": 2.349, "v1": -26.374, "v2": 39.173, "v3": -38.814, "v4": 22.993, "amplitude": 40.621, "phase_angle": 15.346, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 224.287, 198.729, 312.755 ], "x_axis": [ 0.417, 0.074, 0.906 ], "y_axis": [ 0.843, 0.342, -0.416 ], "z_axis": [ -0.340, 0.937, 0.080 ], "quaternion": [ 0.678, -0.499, -0.460, -0.284 ] } }, { "index": 627, "index_chain": 627, "chain_name": "a", "nt_resnum": 628, "nt_name": "C", "nt_code": "C", "nt_id": "///a/628", "linked_nts": [ "///a/627", "///a/629" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -57.910, "beta": 154.005, "gamma": 56.311, "delta": 76.289, "epsilon": -145.705, "zeta": -73.958, "epsilon_zeta": -71.747, "bb_type": "BI", "chi": -160.916, "glyco_bond": "anti", "C5prime_xyz": [ -1.527, 8.831, 0.564 ], "P_xyz": [ 1.006, 9.297, 0.199 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.938, "theta": -145.592, "eta_prime": 175.183, "theta_prime": -147.751, "eta_base": -129.702, "theta_base": -124.189, "v0": -0.079, "v1": -24.739, "v2": 38.865, "v3": -39.878, "v4": 25.113, "amplitude": 41.015, "phase_angle": 18.633, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.353, "filter_rmsd": 0.066, "frame": { "rmsd": 0.011, "origin": [ 223.824, 201.240, 315.367 ], "x_axis": [ 0.928, 0.038, 0.370 ], "y_axis": [ 0.322, 0.414, -0.852 ], "z_axis": [ -0.186, 0.909, 0.372 ], "quaternion": [ 0.824, -0.534, -0.169, -0.086 ] } }, { "index": 628, "index_chain": 628, "chain_name": "a", "nt_resnum": 629, "nt_name": "A", "nt_code": "A", "nt_id": "///a/629", "linked_nts": [ "///a/628", "///a/630" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -66.906, "beta": 165.657, "gamma": 64.344, "delta": 76.489, "epsilon": -145.114, "zeta": -82.775, "epsilon_zeta": -62.339, "bb_type": "BI", "chi": -165.143, "glyco_bond": "anti", "C5prime_xyz": [ -1.580, 8.734, 0.791 ], "P_xyz": [ 0.934, 9.402, 0.638 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.640, "theta": -154.613, "eta_prime": -179.426, "theta_prime": -153.837, "eta_base": -139.328, "theta_base": -137.265, "v0": -0.416, "v1": -24.038, "v2": 38.067, "v3": -39.273, "v4": 25.038, "amplitude": 40.298, "phase_angle": 19.152, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.731, "filter_rmsd": 0.042, "frame": { "rmsd": 0.011, "origin": [ 223.946, 203.415, 318.118 ], "x_axis": [ 0.980, 0.095, -0.177 ], "y_axis": [ -0.201, 0.434, -0.878 ], "z_axis": [ -0.007, 0.896, 0.444 ], "quaternion": [ 0.845, -0.525, 0.050, 0.088 ] } }, { "index": 629, "index_chain": 629, "chain_name": "a", "nt_resnum": 630, "nt_name": "U", "nt_code": "U", "nt_id": "///a/630", "linked_nts": [ "///a/629", "///a/631" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -55.071, "beta": 162.607, "gamma": 56.932, "delta": 76.986, "epsilon": -153.342, "zeta": -78.927, "epsilon_zeta": -74.415, "bb_type": "BI", "chi": -152.987, "glyco_bond": "anti", "C5prime_xyz": [ -1.665, 8.799, 0.071 ], "P_xyz": [ 0.825, 9.395, -0.376 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.642, "theta": -126.594, "eta_prime": -177.282, "theta_prime": -135.375, "eta_base": -148.782, "theta_base": -105.579, "v0": -0.760, "v1": -23.384, "v2": 37.348, "v3": -38.783, "v4": 24.978, "amplitude": 39.667, "phase_angle": 19.692, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.774, "filter_rmsd": 0.104, "frame": { "rmsd": 0.011, "origin": [ 224.579, 205.227, 320.924 ], "x_axis": [ 0.809, 0.319, -0.494 ], "y_axis": [ -0.584, 0.533, -0.612 ], "z_axis": [ 0.068, 0.784, 0.617 ], "quaternion": [ 0.860, -0.406, 0.163, 0.263 ] } }, { "index": 630, "index_chain": 630, "chain_name": "a", "nt_resnum": 631, "nt_name": "C", "nt_code": "C", "nt_id": "///a/631", "linked_nts": [ "///a/630", "///a/632" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 168.276, "beta": -160.231, "gamma": 162.799, "delta": 82.498, "epsilon": -132.015, "zeta": -80.634, "epsilon_zeta": -51.381, "bb_type": "BI", "chi": -163.245, "glyco_bond": "anti", "C5prime_xyz": [ -1.220, 8.713, 0.737 ], "P_xyz": [ 0.564, 9.857, -0.789 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.651, "theta": -156.364, "eta_prime": 176.978, "theta_prime": -155.834, "eta_base": -134.911, "theta_base": -128.417, "v0": 1.821, "v1": -23.421, "v2": 34.969, "v3": -34.887, "v4": 20.865, "amplitude": 36.347, "phase_angle": 15.827, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.466, "filter_rmsd": 0.068, "frame": { "rmsd": 0.011, "origin": [ 227.298, 207.609, 321.855 ], "x_axis": [ 0.260, 0.315, -0.913 ], "y_axis": [ -0.879, 0.468, -0.089 ], "z_axis": [ 0.399, 0.826, 0.399 ], "quaternion": [ 0.729, -0.313, 0.450, 0.409 ] } }, { "index": 631, "index_chain": 631, "chain_name": "a", "nt_resnum": 632, "nt_name": "C", "nt_code": "C", "nt_id": "///a/632", "linked_nts": [ "///a/631", "///a/633" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -53.951, "beta": 172.654, "gamma": 37.744, "delta": 78.861, "epsilon": -148.094, "zeta": -77.981, "epsilon_zeta": -70.114, "bb_type": "BI", "chi": -163.133, "glyco_bond": "anti", "C5prime_xyz": [ -1.352, 8.775, 0.708 ], "P_xyz": [ 1.127, 9.268, 1.377 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.812, "theta": -153.205, "eta_prime": 172.552, "theta_prime": -149.554, "eta_base": -146.794, "theta_base": -125.512, "v0": 1.505, "v1": -24.582, "v2": 37.097, "v3": -37.112, "v4": 22.426, "amplitude": 38.656, "phase_angle": 16.330, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.497, "filter_rmsd": 0.066, "frame": { "rmsd": 0.011, "origin": [ 229.983, 210.754, 322.250 ], "x_axis": [ -0.435, 0.139, -0.890 ], "y_axis": [ -0.874, 0.173, 0.454 ], "z_axis": [ 0.217, 0.975, 0.047 ], "quaternion": [ 0.443, -0.294, 0.625, 0.572 ] } }, { "index": 632, "index_chain": 632, "chain_name": "a", "nt_resnum": 633, "nt_name": "A", "nt_code": "A", "nt_id": "///a/633", "linked_nts": [ "///a/632", "///a/634" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -63.486, "beta": 163.131, "gamma": 64.316, "delta": 78.956, "epsilon": -147.549, "zeta": -79.857, "epsilon_zeta": -67.691, "bb_type": "BI", "chi": -165.780, "glyco_bond": "anti", "C5prime_xyz": [ -1.418, 8.635, 0.858 ], "P_xyz": [ 1.135, 9.107, 0.554 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.081, "theta": -151.881, "eta_prime": -175.818, "theta_prime": -153.004, "eta_base": -140.053, "theta_base": -137.796, "v0": 3.217, "v1": -26.225, "v2": 37.974, "v3": -37.100, "v4": 21.434, "amplitude": 39.133, "phase_angle": 13.978, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.754, "filter_rmsd": 0.038, "frame": { "rmsd": 0.011, "origin": [ 231.818, 214.015, 321.321 ], "x_axis": [ -0.789, 0.216, -0.575 ], "y_axis": [ -0.561, 0.130, 0.818 ], "z_axis": [ 0.251, 0.968, 0.019 ], "quaternion": [ 0.300, -0.125, 0.689, 0.648 ] } }, { "index": 633, "index_chain": 633, "chain_name": "a", "nt_resnum": 634, "nt_name": "A", "nt_code": "A", "nt_id": "///a/634", "linked_nts": [ "///a/633", "///a/635" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end,multiplet", "alpha": -61.001, "beta": 161.980, "gamma": 62.554, "delta": 82.505, "epsilon": -127.523, "zeta": -75.110, "epsilon_zeta": -52.414, "bb_type": "--", "chi": -169.867, "glyco_bond": "anti", "C5prime_xyz": [ -1.689, 8.642, 1.073 ], "P_xyz": [ 0.860, 9.191, 1.218 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.698, "theta": -129.287, "eta_prime": -172.187, "theta_prime": -120.963, "eta_base": -145.359, "theta_base": -74.835, "v0": -1.487, "v1": -20.551, "v2": 33.461, "v3": -35.225, "v4": 23.205, "amplitude": 35.822, "phase_angle": 20.920, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.792, "filter_rmsd": 0.041, "frame": { "rmsd": 0.015, "origin": [ 233.460, 216.798, 319.684 ], "x_axis": [ -0.979, 0.123, -0.162 ], "y_axis": [ -0.154, 0.069, 0.986 ], "z_axis": [ 0.133, 0.990, -0.048 ], "quaternion": [ 0.102, -0.011, 0.724, 0.682 ] } }, { "index": 634, "index_chain": 634, "chain_name": "a", "nt_resnum": 635, "nt_name": "A", "nt_code": "A", "nt_id": "///a/635", "linked_nts": [ "///a/634", "///a/636" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical", "alpha": -75.989, "beta": 178.528, "gamma": 69.061, "delta": 145.239, "epsilon": -125.271, "zeta": 165.743, "epsilon_zeta": 68.985, "bb_type": "BII", "chi": -130.425, "glyco_bond": "anti", "C5prime_xyz": [ -1.388, 8.549, -0.687 ], "P_xyz": [ 1.161, 8.730, -0.099 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.923, "theta": 147.573, "eta_prime": -150.645, "theta_prime": 121.730, "eta_base": -97.305, "theta_base": 112.976, "v0": -17.425, "v1": 31.154, "v2": -32.208, "v3": 23.004, "v4": -3.694, "amplitude": 32.983, "phase_angle": 167.552, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.582, "filter_rmsd": 0.042, "frame": { "rmsd": 0.017, "origin": [ 231.234, 219.915, 320.002 ], "x_axis": [ -0.621, -0.378, 0.686 ], "y_axis": [ 0.661, 0.218, 0.718 ], "z_axis": [ -0.421, 0.900, 0.115 ], "quaternion": [ -0.422, 0.108, 0.657, 0.616 ] } }, { "index": 635, "index_chain": 635, "chain_name": "a", "nt_resnum": 636, "nt_name": "A", "nt_code": "A", "nt_id": "///a/636", "linked_nts": [ "///a/635", "///a/637" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -109.784, "beta": 144.076, "gamma": 37.550, "delta": 81.223, "epsilon": -135.359, "zeta": -82.442, "epsilon_zeta": -52.916, "bb_type": "BI", "chi": -158.447, "glyco_bond": "anti", "C5prime_xyz": [ -1.377, 8.710, 0.427 ], "P_xyz": [ 1.234, 8.791, 0.506 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 139.044, "theta": -136.951, "eta_prime": 128.298, "theta_prime": -136.681, "eta_base": 129.137, "theta_base": -109.800, "v0": 1.211, "v1": -23.478, "v2": 35.626, "v3": -35.863, "v4": 21.874, "amplitude": 37.209, "phase_angle": 16.773, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.112, "filter_rmsd": 0.040, "frame": { "rmsd": 0.015, "origin": [ 238.179, 218.375, 316.980 ], "x_axis": [ -0.925, 0.058, 0.375 ], "y_axis": [ 0.292, 0.740, 0.606 ], "z_axis": [ -0.243, 0.670, -0.701 ], "quaternion": [ -0.168, 0.095, 0.917, 0.348 ] } }, { "index": 636, "index_chain": 636, "chain_name": "a", "nt_resnum": 637, "nt_name": "C", "nt_code": "C", "nt_id": "///a/637", "linked_nts": [ "///a/636", "///a/638" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end", "alpha": -54.682, "beta": 160.600, "gamma": 49.588, "delta": 78.805, "epsilon": -143.302, "zeta": -74.201, "epsilon_zeta": -69.102, "bb_type": "BI", "chi": -153.219, "glyco_bond": "anti", "C5prime_xyz": [ -1.539, 8.857, 0.122 ], "P_xyz": [ 1.019, 9.337, -0.043 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.667, "theta": -143.550, "eta_prime": 178.402, "theta_prime": -143.645, "eta_base": -138.900, "theta_base": -122.836, "v0": -0.002, "v1": -23.544, "v2": 36.858, "v3": -37.864, "v4": 23.866, "amplitude": 38.891, "phase_angle": 18.606, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.757, "filter_rmsd": 0.068, "frame": { "rmsd": 0.015, "origin": [ 235.876, 219.882, 314.986 ], "x_axis": [ -0.527, 0.295, 0.797 ], "y_axis": [ 0.683, 0.705, 0.191 ], "z_axis": [ -0.506, 0.645, -0.573 ], "quaternion": [ -0.389, 0.292, 0.838, 0.249 ] } }, { "index": 637, "index_chain": 637, "chain_name": "a", "nt_resnum": 638, "nt_name": "U", "nt_code": "U", "nt_id": "///a/638", "linked_nts": [ "///a/637", "///a/639" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": -70.746, "beta": 171.934, "gamma": 61.786, "delta": 75.002, "epsilon": -143.581, "zeta": -62.200, "epsilon_zeta": -81.381, "bb_type": "BI", "chi": -165.029, "glyco_bond": "anti", "C5prime_xyz": [ -1.671, 8.783, 0.767 ], "P_xyz": [ 0.801, 9.584, 0.686 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.340, "theta": -136.912, "eta_prime": 177.259, "theta_prime": -135.149, "eta_base": -147.834, "theta_base": -99.999, "v0": -0.630, "v1": -24.819, "v2": 39.465, "v3": -40.748, "v4": 26.050, "amplitude": 41.823, "phase_angle": 19.331, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.799, "filter_rmsd": 0.106, "frame": { "rmsd": 0.010, "origin": [ 232.175, 222.469, 313.400 ], "x_axis": [ 0.023, 0.374, 0.927 ], "y_axis": [ 0.889, 0.417, -0.190 ], "z_axis": [ -0.458, 0.828, -0.323 ], "quaternion": [ 0.529, -0.482, -0.655, -0.243 ] } }, { "index": 638, "index_chain": 638, "chain_name": "a", "nt_resnum": 639, "nt_name": "A", "nt_code": "A", "nt_id": "///a/639", "linked_nts": [ "///a/638", "///a/640" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -74.353, "beta": 174.922, "gamma": 69.650, "delta": 76.154, "epsilon": -139.183, "zeta": -65.937, "epsilon_zeta": -73.246, "bb_type": "BI", "chi": -164.480, "glyco_bond": "anti", "C5prime_xyz": [ -1.715, 8.794, 0.724 ], "P_xyz": [ 0.755, 9.652, 0.622 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.477, "theta": -136.856, "eta_prime": -171.125, "theta_prime": -135.009, "eta_base": -119.653, "theta_base": -90.588, "v0": -1.999, "v1": -22.538, "v2": 37.076, "v3": -39.242, "v4": 26.012, "amplitude": 39.821, "phase_angle": 21.398, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.497, "filter_rmsd": 0.039, "frame": { "rmsd": 0.012, "origin": [ 229.951, 226.020, 315.373 ], "x_axis": [ 0.667, 0.436, 0.604 ], "y_axis": [ 0.617, 0.130, -0.776 ], "z_axis": [ -0.417, 0.891, -0.182 ], "quaternion": [ 0.636, -0.656, -0.402, -0.071 ] } }, { "index": 639, "index_chain": 639, "chain_name": "a", "nt_resnum": 640, "nt_name": "C", "nt_code": "C", "nt_id": "///a/640", "linked_nts": [ "///a/639", "///a/641" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -73.305, "beta": 170.211, "gamma": 62.049, "delta": 78.247, "epsilon": -143.770, "zeta": -65.656, "epsilon_zeta": -78.114, "bb_type": "BI", "chi": -156.746, "glyco_bond": "anti", "C5prime_xyz": [ -1.563, 8.874, 0.296 ], "P_xyz": [ 0.959, 9.514, 0.053 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.644, "theta": -137.533, "eta_prime": -178.918, "theta_prime": -137.716, "eta_base": -117.757, "theta_base": -109.507, "v0": -0.685, "v1": -23.018, "v2": 36.639, "v3": -37.993, "v4": 24.384, "amplitude": 38.881, "phase_angle": 19.551, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.777, "filter_rmsd": 0.063, "frame": { "rmsd": 0.007, "origin": [ 230.643, 229.682, 316.848 ], "x_axis": [ 0.967, 0.233, -0.104 ], "y_axis": [ -0.101, -0.024, -0.995 ], "z_axis": [ -0.234, 0.972, -0.000 ], "quaternion": [ 0.697, -0.706, -0.047, 0.120 ] } }, { "index": 640, "index_chain": 640, "chain_name": "a", "nt_resnum": 641, "nt_name": "U", "nt_code": "U", "nt_id": "///a/641", "linked_nts": [ "///a/640", "///a/642" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -73.507, "beta": 174.332, "gamma": 61.279, "delta": 76.204, "epsilon": -146.398, "zeta": -75.882, "epsilon_zeta": -70.516, "bb_type": "BI", "chi": -154.624, "glyco_bond": "anti", "C5prime_xyz": [ -1.857, 8.850, 0.151 ], "P_xyz": [ 0.564, 9.775, -0.124 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.517, "theta": -150.872, "eta_prime": 179.778, "theta_prime": -150.888, "eta_base": -136.490, "theta_base": -125.884, "v0": -3.051, "v1": -21.472, "v2": 36.496, "v3": -39.193, "v4": 26.677, "amplitude": 39.619, "phase_angle": 22.901, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.810, "filter_rmsd": 0.100, "frame": { "rmsd": 0.009, "origin": [ 232.060, 233.306, 317.533 ], "x_axis": [ 0.778, -0.050, -0.626 ], "y_axis": [ -0.627, -0.008, -0.779 ], "z_axis": [ 0.034, 0.999, -0.038 ], "quaternion": [ 0.658, -0.675, 0.251, 0.219 ] } }, { "index": 641, "index_chain": 641, "chain_name": "a", "nt_resnum": 642, "nt_name": "G", "nt_code": "G", "nt_id": "///a/642", "linked_nts": [ "///a/641", "///a/643" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -61.980, "beta": 174.773, "gamma": 44.504, "delta": 76.969, "epsilon": -150.509, "zeta": -71.268, "epsilon_zeta": -79.241, "bb_type": "BI", "chi": -169.363, "glyco_bond": "anti", "C5prime_xyz": [ -1.740, 8.748, 1.022 ], "P_xyz": [ 0.664, 9.493, 1.735 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.875, "theta": -151.255, "eta_prime": 170.268, "theta_prime": -148.168, "eta_base": -151.716, "theta_base": -128.188, "v0": -1.202, "v1": -23.230, "v2": 37.503, "v3": -39.146, "v4": 25.406, "amplitude": 39.967, "phase_angle": 20.224, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.789, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 234.102, 237.034, 317.376 ], "x_axis": [ 0.276, -0.558, -0.783 ], "y_axis": [ -0.953, -0.051, -0.300 ], "z_axis": [ 0.127, 0.828, -0.546 ], "quaternion": [ -0.412, 0.684, -0.552, -0.239 ] } }, { "index": 642, "index_chain": 642, "chain_name": "a", "nt_resnum": 643, "nt_name": "A", "nt_code": "A", "nt_id": "///a/643", "linked_nts": [ "///a/642", "///a/644" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -71.405, "beta": 161.537, "gamma": 80.649, "delta": 76.415, "epsilon": -141.818, "zeta": -38.046, "epsilon_zeta": -103.773, "bb_type": "BI", "chi": -165.501, "glyco_bond": "anti", "C5prime_xyz": [ -1.926, 8.762, 0.764 ], "P_xyz": [ 0.407, 9.762, 0.115 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.353, "theta": -125.154, "eta_prime": -168.173, "theta_prime": -139.821, "eta_base": -136.658, "theta_base": -117.734, "v0": -2.578, "v1": -21.840, "v2": 36.597, "v3": -39.070, "v4": 26.222, "amplitude": 39.535, "phase_angle": 22.228, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.111, "filter_rmsd": 0.038, "frame": { "rmsd": 0.014, "origin": [ 236.877, 239.322, 315.879 ], "x_axis": [ -0.103, -0.357, -0.928 ], "y_axis": [ -0.953, 0.304, -0.011 ], "z_axis": [ 0.286, 0.883, -0.371 ], "quaternion": [ 0.456, -0.491, 0.667, 0.327 ] } }, { "index": 643, "index_chain": 643, "chain_name": "a", "nt_resnum": 644, "nt_name": "G", "nt_code": "G", "nt_id": "///a/644", "linked_nts": [ "///a/643", "///a/645" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -138.769, "beta": 119.892, "gamma": 152.587, "delta": 83.178, "epsilon": -142.641, "zeta": -64.629, "epsilon_zeta": -78.012, "bb_type": "BI", "chi": 176.481, "glyco_bond": "anti", "C5prime_xyz": [ -1.315, 8.314, 1.877 ], "P_xyz": [ -0.430, 10.492, 0.695 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.518, "theta": -176.287, "eta_prime": -177.792, "theta_prime": -165.036, "eta_base": -134.361, "theta_base": -130.203, "v0": 3.819, "v1": -24.754, "v2": 35.075, "v3": -33.834, "v4": 18.966, "amplitude": 35.948, "phase_angle": 12.649, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.010, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 239.382, 240.502, 312.738 ], "x_axis": [ -0.605, -0.315, -0.731 ], "y_axis": [ -0.759, 0.506, 0.409 ], "z_axis": [ 0.241, 0.803, -0.545 ], "quaternion": [ 0.298, -0.330, 0.815, 0.372 ] } }, { "index": 644, "index_chain": 644, "chain_name": "a", "nt_resnum": 645, "nt_name": "C", "nt_code": "C", "nt_id": "///a/645", "linked_nts": [ "///a/644", "///a/646" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -74.771, "beta": -173.917, "gamma": 53.134, "delta": 81.038, "epsilon": -150.941, "zeta": -74.315, "epsilon_zeta": -76.627, "bb_type": "BI", "chi": -160.065, "glyco_bond": "anti", "C5prime_xyz": [ -1.378, 8.806, 0.518 ], "P_xyz": [ 1.122, 9.347, 1.056 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.238, "theta": -150.082, "eta_prime": -179.388, "theta_prime": -139.914, "eta_base": -134.897, "theta_base": -122.061, "v0": -0.133, "v1": -22.562, "v2": 35.374, "v3": -36.391, "v4": 23.050, "amplitude": 37.362, "phase_angle": 18.777, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.857, "filter_rmsd": 0.064, "frame": { "rmsd": 0.011, "origin": [ 240.836, 241.606, 309.518 ], "x_axis": [ -0.949, 0.071, -0.309 ], "y_axis": [ -0.195, 0.638, 0.745 ], "z_axis": [ 0.250, 0.766, -0.592 ], "quaternion": [ 0.157, -0.035, 0.891, 0.424 ] } }, { "index": 645, "index_chain": 645, "chain_name": "a", "nt_resnum": 646, "nt_name": "U", "nt_code": "U", "nt_id": "///a/646", "linked_nts": [ "///a/645", "///a/647" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -69.575, "beta": 173.989, "gamma": 76.707, "delta": 148.847, "epsilon": -138.917, "zeta": -162.473, "epsilon_zeta": 23.556, "bb_type": "--", "chi": -129.922, "glyco_bond": "anti", "C5prime_xyz": [ -2.082, 8.645, -0.692 ], "P_xyz": [ 0.414, 9.317, -0.260 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -177.697, "theta": -149.767, "eta_prime": -142.476, "theta_prime": 154.028, "eta_base": -123.170, "theta_base": 96.501, "v0": -23.484, "v1": 37.998, "v2": -37.243, "v3": 24.623, "v4": -0.940, "amplitude": 39.029, "phase_angle": 162.601, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.435, "filter_rmsd": 0.099, "frame": { "rmsd": 0.015, "origin": [ 241.198, 243.117, 306.730 ], "x_axis": [ -0.956, 0.089, 0.279 ], "y_axis": [ 0.260, 0.695, 0.670 ], "z_axis": [ -0.134, 0.714, -0.687 ], "quaternion": [ -0.113, 0.096, 0.914, 0.379 ] } }, { "index": 646, "index_chain": 646, "chain_name": "a", "nt_resnum": 647, "nt_name": "A", "nt_code": "A", "nt_id": "///a/647", "linked_nts": [ "///a/646", "///a/648" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-stack", "alpha": 57.362, "beta": -162.940, "gamma": 178.636, "delta": 150.673, "epsilon": -125.241, "zeta": -85.882, "epsilon_zeta": -39.359, "bb_type": "--", "chi": -114.595, "glyco_bond": "anti", "C5prime_xyz": [ -1.564, 8.310, -1.430 ], "P_xyz": [ 0.189, 8.580, -3.365 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 125.081, "theta": -96.337, "eta_prime": 116.961, "theta_prime": -113.338, "eta_base": 73.864, "theta_base": -80.438, "v0": -17.109, "v1": 33.203, "v2": -35.783, "v3": 26.712, "v4": -6.259, "amplitude": 36.223, "phase_angle": 171.052, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.037, "frame": { "rmsd": 0.015, "origin": [ 249.034, 239.982, 311.911 ], "x_axis": [ -0.734, 0.229, 0.640 ], "y_axis": [ -0.266, 0.769, -0.581 ], "z_axis": [ -0.625, -0.597, -0.503 ], "quaternion": [ -0.365, -0.011, 0.867, -0.340 ] } }, { "index": 647, "index_chain": 647, "chain_name": "a", "nt_resnum": 648, "nt_name": "G", "nt_code": "G", "nt_id": "///a/648", "linked_nts": [ "///a/647", "///a/649" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix", "alpha": 164.264, "beta": -167.680, "gamma": 151.836, "delta": 79.003, "epsilon": -113.623, "zeta": -68.448, "epsilon_zeta": -45.175, "bb_type": "--", "chi": -177.210, "glyco_bond": "anti", "C5prime_xyz": [ -1.221, 8.431, 1.541 ], "P_xyz": [ 0.751, 9.817, 0.573 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 133.963, "theta": -130.713, "eta_prime": 177.146, "theta_prime": -126.877, "eta_base": -144.663, "theta_base": -72.456, "v0": 4.552, "v1": -27.393, "v2": 38.725, "v3": -37.059, "v4": 20.491, "amplitude": 39.609, "phase_angle": 12.125, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 240.170, 244.699, 302.681 ], "x_axis": [ 0.091, 0.887, 0.452 ], "y_axis": [ 0.992, -0.120, 0.036 ], "z_axis": [ 0.087, 0.445, -0.891 ], "quaternion": [ -0.141, 0.725, 0.648, 0.186 ] } }, { "index": 648, "index_chain": 648, "chain_name": "a", "nt_resnum": 649, "nt_name": "A", "nt_code": "A", "nt_id": "///a/649", "linked_nts": [ "///a/648", "///a/650" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -59.090, "beta": 163.466, "gamma": 52.121, "delta": 78.303, "epsilon": -147.456, "zeta": -71.578, "epsilon_zeta": -75.878, "bb_type": "BI", "chi": -163.810, "glyco_bond": "anti", "C5prime_xyz": [ -1.405, 8.676, 0.708 ], "P_xyz": [ 1.170, 9.103, 0.719 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.822, "theta": -145.686, "eta_prime": -178.450, "theta_prime": -147.503, "eta_base": -100.678, "theta_base": -123.099, "v0": 1.536, "v1": -25.437, "v2": 38.342, "v3": -38.547, "v4": 23.376, "amplitude": 39.988, "phase_angle": 16.498, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.382, "filter_rmsd": 0.040, "frame": { "rmsd": 0.012, "origin": [ 241.962, 249.409, 302.558 ], "x_axis": [ 0.883, 0.221, 0.415 ], "y_axis": [ 0.437, -0.711, -0.551 ], "z_axis": [ 0.173, 0.667, -0.724 ], "quaternion": [ -0.334, 0.911, 0.181, 0.161 ] } }, { "index": 649, "index_chain": 649, "chain_name": "a", "nt_resnum": 650, "nt_name": "G", "nt_code": "G", "nt_id": "///a/650", "linked_nts": [ "///a/649", "///a/651" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -80.173, "beta": 164.647, "gamma": 70.214, "delta": 77.126, "epsilon": -154.227, "zeta": -77.196, "epsilon_zeta": -77.031, "bb_type": "BI", "chi": -170.108, "glyco_bond": "anti", "C5prime_xyz": [ -1.378, 8.692, 1.050 ], "P_xyz": [ 1.144, 9.266, 0.668 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.174, "theta": -156.137, "eta_prime": 174.602, "theta_prime": -156.637, "eta_base": -141.250, "theta_base": -150.082, "v0": 2.898, "v1": -27.253, "v2": 39.899, "v3": -39.215, "v4": 22.889, "amplitude": 41.228, "phase_angle": 14.585, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.465, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 242.654, 252.582, 301.725 ], "x_axis": [ 0.957, -0.253, 0.141 ], "y_axis": [ -0.055, -0.637, -0.769 ], "z_axis": [ 0.284, 0.729, -0.623 ], "quaternion": [ -0.418, 0.897, -0.086, 0.119 ] } }, { "index": 650, "index_chain": 650, "chain_name": "a", "nt_resnum": 651, "nt_name": "U", "nt_code": "U", "nt_id": "///a/651", "linked_nts": [ "///a/650", "///a/652" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem", "alpha": -67.561, "beta": 174.990, "gamma": 63.728, "delta": 82.641, "epsilon": -138.968, "zeta": -88.017, "epsilon_zeta": -50.951, "bb_type": "BI", "chi": -153.539, "glyco_bond": "anti", "C5prime_xyz": [ -1.615, 8.744, 0.137 ], "P_xyz": [ 0.936, 9.306, -0.045 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.536, "theta": -149.203, "eta_prime": -173.430, "theta_prime": -147.446, "eta_base": -158.355, "theta_base": -119.847, "v0": 0.867, "v1": -22.758, "v2": 34.699, "v3": -35.130, "v4": 21.617, "amplitude": 36.330, "phase_angle": 17.231, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.774, "filter_rmsd": 0.104, "frame": { "rmsd": 0.013, "origin": [ 243.196, 255.892, 301.957 ], "x_axis": [ 0.871, -0.466, -0.159 ], "y_axis": [ -0.326, -0.305, -0.895 ], "z_axis": [ 0.368, 0.831, -0.418 ], "quaternion": [ 0.536, -0.805, 0.246, -0.065 ] } }, { "index": 651, "index_chain": 651, "chain_name": "a", "nt_resnum": 652, "nt_name": "A", "nt_code": "A", "nt_id": "///a/652", "linked_nts": [ "///a/651", "///a/653" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -55.419, "beta": 157.710, "gamma": 56.476, "delta": 79.704, "epsilon": -139.760, "zeta": -58.820, "epsilon_zeta": -80.941, "bb_type": "BI", "chi": -166.566, "glyco_bond": "anti", "C5prime_xyz": [ -1.438, 8.611, 0.885 ], "P_xyz": [ 1.142, 8.967, 0.686 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.981, "theta": -123.970, "eta_prime": -177.412, "theta_prime": -122.955, "eta_base": -137.407, "theta_base": -95.240, "v0": 3.080, "v1": -26.226, "v2": 38.134, "v3": -37.327, "v4": 21.601, "amplitude": 39.330, "phase_angle": 14.165, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.693, "filter_rmsd": 0.037, "frame": { "rmsd": 0.015, "origin": [ 246.165, 259.327, 300.020 ], "x_axis": [ 0.464, -0.711, -0.529 ], "y_axis": [ -0.802, -0.084, -0.591 ], "z_axis": [ 0.376, 0.698, -0.609 ], "quaternion": [ -0.439, 0.734, -0.515, -0.052 ] } }, { "index": 652, "index_chain": 652, "chain_name": "a", "nt_resnum": 653, "nt_name": "C", "nt_code": "C", "nt_id": "///a/653", "linked_nts": [ "///a/652", "///a/654" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -73.312, "beta": -162.528, "gamma": 55.097, "delta": 78.643, "epsilon": -164.911, "zeta": -87.977, "epsilon_zeta": -76.934, "bb_type": "BI", "chi": -160.681, "glyco_bond": "anti", "C5prime_xyz": [ -1.467, 8.854, 0.555 ], "P_xyz": [ 0.938, 9.474, 1.371 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.284, "theta": -141.954, "eta_prime": -169.777, "theta_prime": -150.918, "eta_base": -124.410, "theta_base": -144.862, "v0": -2.483, "v1": -20.867, "v2": 35.061, "v3": -37.415, "v4": 25.188, "amplitude": 37.890, "phase_angle": 22.283, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.677, "filter_rmsd": 0.064, "frame": { "rmsd": 0.008, "origin": [ 249.998, 260.094, 295.060 ], "x_axis": [ -0.408, -0.771, -0.490 ], "y_axis": [ -0.907, 0.401, 0.125 ], "z_axis": [ 0.100, 0.495, -0.863 ], "quaternion": [ 0.180, -0.513, 0.817, 0.190 ] } }, { "index": 653, "index_chain": 653, "chain_name": "a", "nt_resnum": 654, "nt_name": "G", "nt_code": "G", "nt_id": "///a/654", "linked_nts": [ "///a/653", "///a/655" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 140.501, "beta": -154.328, "gamma": -175.958, "delta": 80.665, "epsilon": -118.730, "zeta": -68.753, "epsilon_zeta": -49.977, "bb_type": "--", "chi": -174.640, "glyco_bond": "anti", "C5prime_xyz": [ -1.156, 8.422, 1.412 ], "P_xyz": [ 0.358, 10.176, 0.208 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.862, "theta": -145.878, "eta_prime": 170.560, "theta_prime": -140.071, "eta_base": -168.630, "theta_base": -93.485, "v0": 6.725, "v1": -28.572, "v2": 38.569, "v3": -35.696, "v4": 18.248, "amplitude": 39.042, "phase_angle": 8.927, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.644, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 252.641, 260.544, 292.909 ], "x_axis": [ -0.670, -0.603, -0.433 ], "y_axis": [ -0.704, 0.701, 0.114 ], "z_axis": [ 0.235, 0.382, -0.894 ], "quaternion": [ 0.185, -0.362, 0.903, 0.137 ] } }, { "index": 654, "index_chain": 654, "chain_name": "a", "nt_resnum": 655, "nt_name": "G", "nt_code": "G", "nt_id": "///a/655", "linked_nts": [ "///a/654", "///a/656" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -60.301, "beta": 159.205, "gamma": 62.777, "delta": 77.497, "epsilon": -144.554, "zeta": -133.018, "epsilon_zeta": -11.536, "bb_type": "--", "chi": -168.176, "glyco_bond": "anti", "C5prime_xyz": [ -1.701, 8.762, 0.933 ], "P_xyz": [ 0.790, 9.487, 0.766 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.794, "theta": -155.857, "eta_prime": -172.206, "theta_prime": -158.737, "eta_base": -105.916, "theta_base": -158.753, "v0": -2.145, "v1": -22.020, "v2": 36.495, "v3": -38.780, "v4": 25.801, "amplitude": 39.280, "phase_angle": 21.704, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.462, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 250.964, 259.301, 288.894 ], "x_axis": [ -0.991, 0.077, -0.106 ], "y_axis": [ 0.046, 0.962, 0.270 ], "z_axis": [ 0.123, 0.262, -0.957 ], "quaternion": [ 0.058, 0.031, 0.989, 0.135 ] } }, { "index": 655, "index_chain": 655, "chain_name": "a", "nt_resnum": 656, "nt_name": "U", "nt_code": "U", "nt_id": "///a/656", "linked_nts": [ "///a/655", "///a/657" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end", "alpha": 133.833, "beta": -108.925, "gamma": 174.030, "delta": 79.892, "epsilon": -110.087, "zeta": -108.334, "epsilon_zeta": -1.753, "bb_type": "--", "chi": -159.546, "glyco_bond": "anti", "C5prime_xyz": [ -1.511, 8.756, 0.496 ], "P_xyz": [ -0.147, 9.138, -1.698 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.327, "theta": -155.190, "eta_prime": -179.640, "theta_prime": -156.520, "eta_base": -171.339, "theta_base": -131.204, "v0": 0.886, "v1": -23.664, "v2": 36.265, "v3": -36.723, "v4": 22.595, "amplitude": 37.984, "phase_angle": 17.302, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.109, "frame": { "rmsd": 0.012, "origin": [ 251.880, 258.077, 286.531 ], "x_axis": [ -0.927, 0.302, -0.223 ], "y_axis": [ 0.341, 0.926, -0.163 ], "z_axis": [ 0.157, -0.227, -0.961 ], "quaternion": [ 0.097, 0.165, 0.976, -0.100 ] } }, { "index": 656, "index_chain": 656, "chain_name": "a", "nt_resnum": 657, "nt_name": "A", "nt_code": "A", "nt_id": "///a/657", "linked_nts": [ "///a/656", "///a/658" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -34.729, "beta": 148.056, "gamma": 33.264, "delta": 81.488, "epsilon": -152.285, "zeta": -77.303, "epsilon_zeta": -74.982, "bb_type": "BI", "chi": -164.543, "glyco_bond": "anti", "C5prime_xyz": [ -1.632, 8.666, 0.789 ], "P_xyz": [ 0.909, 8.950, 1.311 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.074, "theta": -148.103, "eta_prime": 174.018, "theta_prime": -148.618, "eta_base": -147.719, "theta_base": -128.415, "v0": -0.156, "v1": -21.992, "v2": 34.520, "v3": -35.547, "v4": 22.563, "amplitude": 36.477, "phase_angle": 18.851, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.038, "filter_rmsd": 0.041, "frame": { "rmsd": 0.016, "origin": [ 250.961, 257.731, 281.761 ], "x_axis": [ -0.551, 0.744, 0.378 ], "y_axis": [ 0.824, 0.556, 0.107 ], "z_axis": [ -0.131, 0.370, -0.920 ], "quaternion": [ -0.146, 0.451, 0.870, 0.137 ] } }, { "index": 657, "index_chain": 657, "chain_name": "a", "nt_resnum": 658, "nt_name": "G", "nt_code": "G", "nt_id": "///a/658", "linked_nts": [ "///a/657", "///a/659" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -63.854, "beta": 169.170, "gamma": 57.351, "delta": 78.316, "epsilon": -128.772, "zeta": -113.643, "epsilon_zeta": -15.129, "bb_type": "--", "chi": -150.390, "glyco_bond": "anti", "C5prime_xyz": [ -1.308, 8.830, -0.076 ], "P_xyz": [ 1.233, 9.263, -0.458 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.276, "theta": -177.939, "eta_prime": -177.227, "theta_prime": 165.416, "eta_base": -146.606, "theta_base": 138.214, "v0": 0.265, "v1": -23.783, "v2": 37.011, "v3": -37.862, "v4": 23.740, "amplitude": 38.970, "phase_angle": 18.247, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.936, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 249.128, 258.054, 279.098 ], "x_axis": [ -0.094, 0.962, 0.254 ], "y_axis": [ 0.942, 0.169, -0.290 ], "z_axis": [ -0.322, 0.212, -0.923 ], "quaternion": [ -0.195, 0.644, 0.739, -0.026 ] } }, { "index": 658, "index_chain": 658, "chain_name": "a", "nt_resnum": 659, "nt_name": "A", "nt_code": "A", "nt_id": "///a/659", "linked_nts": [ "///a/658", "///a/660" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix", "alpha": -79.834, "beta": 173.380, "gamma": -77.893, "delta": 91.458, "epsilon": -122.908, "zeta": -118.719, "epsilon_zeta": -4.189, "bb_type": "--", "chi": -138.575, "glyco_bond": "anti", "C5prime_xyz": [ -1.119, 8.507, -0.684 ], "P_xyz": [ -0.044, 10.877, -0.646 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 43.941, "theta": -168.818, "eta_prime": 30.590, "theta_prime": 176.582, "eta_base": 17.398, "theta_base": 159.225, "v0": 6.017, "v1": -23.986, "v2": 31.675, "v3": -29.091, "v4": 14.634, "amplitude": 31.987, "phase_angle": 8.013, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.044, "frame": { "rmsd": 0.017, "origin": [ 256.928, 249.499, 266.448 ], "x_axis": [ 0.785, -0.287, 0.549 ], "y_axis": [ -0.131, 0.789, 0.600 ], "z_axis": [ -0.605, -0.543, 0.582 ], "quaternion": [ 0.888, 0.322, -0.325, -0.044 ] } }, { "index": 659, "index_chain": 659, "chain_name": "a", "nt_resnum": 660, "nt_name": "G", "nt_code": "G", "nt_id": "///a/660", "linked_nts": [ "///a/659", "///a/661" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 94.836, "beta": 171.017, "gamma": 52.759, "delta": 81.115, "epsilon": -161.006, "zeta": -82.571, "epsilon_zeta": -78.436, "bb_type": "BI", "chi": -169.409, "glyco_bond": "anti", "C5prime_xyz": [ -1.278, 8.596, 1.067 ], "P_xyz": [ 1.284, 8.886, 1.385 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -44.839, "theta": -131.593, "eta_prime": -24.977, "theta_prime": -137.311, "eta_base": -10.795, "theta_base": -113.598, "v0": 3.049, "v1": -25.795, "v2": 37.466, "v3": -36.645, "v4": 21.232, "amplitude": 38.636, "phase_angle": 14.132, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "7d", "suiteness": 0.407, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 243.850, 257.490, 275.780 ], "x_axis": [ 0.426, 0.899, 0.102 ], "y_axis": [ 0.891, -0.397, -0.220 ], "z_axis": [ -0.157, 0.184, -0.970 ], "quaternion": [ -0.121, 0.836, 0.536, -0.016 ] } }, { "index": 660, "index_chain": 660, "chain_name": "a", "nt_resnum": 661, "nt_name": "G", "nt_code": "G", "nt_id": "///a/661", "linked_nts": [ "///a/660", "///a/662" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 167.021, "beta": -154.866, "gamma": 168.314, "delta": 81.640, "epsilon": -110.588, "zeta": -95.717, "epsilon_zeta": -14.871, "bb_type": "--", "chi": 164.618, "glyco_bond": "anti", "C5prime_xyz": [ -1.229, 7.870, 2.464 ], "P_xyz": [ 0.950, 9.213, 2.113 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.702, "theta": -153.426, "eta_prime": -174.086, "theta_prime": -147.178, "eta_base": -131.601, "theta_base": -116.349, "v0": 6.333, "v1": -27.961, "v2": 37.966, "v3": -35.319, "v4": 18.330, "amplitude": 38.483, "phase_angle": 9.405, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.634, "filter_rmsd": 0.026, "frame": { "rmsd": 0.026, "origin": [ 242.107, 260.358, 271.976 ], "x_axis": [ 0.872, 0.478, 0.104 ], "y_axis": [ 0.484, -0.874, -0.040 ], "z_axis": [ 0.072, 0.085, -0.994 ], "quaternion": [ -0.032, 0.967, 0.249, 0.046 ] } }, { "index": 661, "index_chain": 661, "chain_name": "a", "nt_resnum": 662, "nt_name": "G", "nt_code": "G", "nt_id": "///a/662", "linked_nts": [ "///a/661", "///a/663" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -42.628, "beta": 148.622, "gamma": 50.596, "delta": 79.959, "epsilon": -147.616, "zeta": -72.865, "epsilon_zeta": -74.751, "bb_type": "BI", "chi": -174.467, "glyco_bond": "anti", "C5prime_xyz": [ -1.478, 8.594, 1.346 ], "P_xyz": [ 1.103, 8.790, 1.530 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.269, "theta": -141.955, "eta_prime": -175.189, "theta_prime": -144.253, "eta_base": -129.071, "theta_base": -128.320, "v0": 0.471, "v1": -23.757, "v2": 36.729, "v3": -37.452, "v4": 23.349, "amplitude": 38.603, "phase_angle": 17.929, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.664, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 242.225, 262.537, 268.671 ], "x_axis": [ 0.992, -0.128, -0.001 ], "y_axis": [ -0.128, -0.990, -0.058 ], "z_axis": [ 0.007, 0.058, -0.998 ], "quaternion": [ -0.029, 0.998, -0.064, 0.001 ] } }, { "index": 662, "index_chain": 662, "chain_name": "a", "nt_resnum": 663, "nt_name": "U", "nt_code": "U", "nt_id": "///a/663", "linked_nts": [ "///a/662", "///a/664" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -69.759, "beta": 174.647, "gamma": 59.729, "delta": 77.098, "epsilon": -144.350, "zeta": -50.888, "epsilon_zeta": -93.462, "bb_type": "BI", "chi": -164.329, "glyco_bond": "anti", "C5prime_xyz": [ -1.558, 8.763, 0.754 ], "P_xyz": [ 0.954, 9.435, 0.918 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.533, "theta": -130.646, "eta_prime": -179.802, "theta_prime": -139.817, "eta_base": -147.326, "theta_base": -127.164, "v0": 0.169, "v1": -24.425, "v2": 38.035, "v3": -38.903, "v4": 24.440, "amplitude": 40.065, "phase_angle": 18.315, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.895, "filter_rmsd": 0.105, "frame": { "rmsd": 0.011, "origin": [ 242.873, 264.836, 265.841 ], "x_axis": [ 0.804, -0.594, -0.029 ], "y_axis": [ -0.593, -0.795, -0.128 ], "z_axis": [ 0.053, 0.120, -0.991 ], "quaternion": [ -0.065, 0.947, -0.313, 0.006 ] } }, { "index": 663, "index_chain": 663, "chain_name": "a", "nt_resnum": 664, "nt_name": "G", "nt_code": "G", "nt_id": "///a/664", "linked_nts": [ "///a/663", "///a/665" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -139.013, "beta": 139.600, "gamma": 139.039, "delta": 79.020, "epsilon": -136.043, "zeta": -69.272, "epsilon_zeta": -66.770, "bb_type": "BI", "chi": -167.936, "glyco_bond": "anti", "C5prime_xyz": [ -1.376, 8.612, 0.998 ], "P_xyz": [ -0.350, 10.302, -0.726 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.124, "theta": -162.519, "eta_prime": 176.056, "theta_prime": -158.826, "eta_base": -153.344, "theta_base": -124.112, "v0": 5.037, "v1": -27.780, "v2": 38.876, "v3": -36.907, "v4": 20.077, "amplitude": 39.661, "phase_angle": 11.419, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 245.232, 266.393, 263.650 ], "x_axis": [ 0.546, -0.834, -0.075 ], "y_axis": [ -0.793, -0.486, -0.368 ], "z_axis": [ 0.271, 0.260, -0.927 ], "quaternion": [ -0.183, 0.860, -0.473, 0.057 ] } }, { "index": 664, "index_chain": 664, "chain_name": "a", "nt_resnum": 665, "nt_name": "G", "nt_code": "G", "nt_id": "///a/665", "linked_nts": [ "///a/664", "///a/666" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -66.003, "beta": 163.646, "gamma": 67.688, "delta": 77.549, "epsilon": -146.150, "zeta": -72.216, "epsilon_zeta": -73.934, "bb_type": "BI", "chi": -165.418, "glyco_bond": "anti", "C5prime_xyz": [ -1.800, 8.804, 0.790 ], "P_xyz": [ 0.661, 9.631, 0.523 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.532, "theta": -145.297, "eta_prime": -172.177, "theta_prime": -144.284, "eta_base": -122.261, "theta_base": -109.901, "v0": -2.285, "v1": -21.763, "v2": 36.157, "v3": -38.484, "v4": 25.731, "amplitude": 38.969, "phase_angle": 21.901, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.610, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 248.302, 265.827, 261.354 ], "x_axis": [ -0.045, -0.978, -0.205 ], "y_axis": [ -0.916, 0.122, -0.383 ], "z_axis": [ 0.399, 0.171, -0.901 ], "quaternion": [ 0.210, -0.658, 0.719, -0.074 ] } }, { "index": 665, "index_chain": 665, "chain_name": "a", "nt_resnum": 666, "nt_name": "U", "nt_code": "U", "nt_id": "///a/666", "linked_nts": [ "///a/665", "///a/667" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -66.847, "beta": 178.063, "gamma": 52.783, "delta": 82.724, "epsilon": 178.709, "zeta": -88.404, "epsilon_zeta": -92.887, "bb_type": "BI", "chi": -154.040, "glyco_bond": "anti", "C5prime_xyz": [ -1.493, 8.768, 0.165 ], "P_xyz": [ 1.050, 9.315, 0.420 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.777, "theta": -146.491, "eta_prime": -176.650, "theta_prime": -153.613, "eta_base": -126.977, "theta_base": -144.697, "v0": -1.051, "v1": -20.454, "v2": 32.856, "v3": -34.361, "v4": 22.388, "amplitude": 35.025, "phase_angle": 20.270, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.946, "filter_rmsd": 0.106, "frame": { "rmsd": 0.011, "origin": [ 250.265, 264.440, 258.509 ], "x_axis": [ -0.702, -0.683, -0.202 ], "y_axis": [ -0.624, 0.727, -0.286 ], "z_axis": [ 0.342, -0.075, -0.937 ], "quaternion": [ 0.148, -0.356, 0.917, -0.099 ] } }, { "index": 666, "index_chain": 666, "chain_name": "a", "nt_resnum": 667, "nt_name": "G", "nt_code": "G", "nt_id": "///a/667", "linked_nts": [ "///a/666", "///a/668" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix", "alpha": 155.619, "beta": -142.754, "gamma": 178.578, "delta": 83.198, "epsilon": -93.717, "zeta": -114.017, "epsilon_zeta": 20.300, "bb_type": "--", "chi": -168.146, "glyco_bond": "anti", "C5prime_xyz": [ -1.312, 8.608, 1.037 ], "P_xyz": [ 0.269, 9.911, -0.565 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -170.510, "theta": -164.075, "eta_prime": -166.010, "theta_prime": -157.213, "eta_base": -146.953, "theta_base": -130.570, "v0": 3.856, "v1": -25.343, "v2": 35.968, "v3": -34.764, "v4": 19.559, "amplitude": 36.883, "phase_angle": 12.786, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.537, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 253.480, 262.953, 255.806 ], "x_axis": [ -0.691, -0.438, -0.576 ], "y_axis": [ -0.334, 0.899, -0.283 ], "z_axis": [ 0.642, -0.003, -0.767 ], "quaternion": [ 0.332, -0.211, 0.916, -0.078 ] } }, { "index": 667, "index_chain": 667, "chain_name": "a", "nt_resnum": 668, "nt_name": "G", "nt_code": "G", "nt_id": "///a/668", "linked_nts": [ "///a/667", "///a/669" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -56.994, "beta": 137.318, "gamma": 53.560, "delta": 82.794, "epsilon": -158.493, "zeta": -80.211, "epsilon_zeta": -78.282, "bb_type": "BI", "chi": -151.603, "glyco_bond": "anti", "C5prime_xyz": [ -1.491, 8.837, -0.001 ], "P_xyz": [ 1.028, 8.804, -0.672 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 150.987, "theta": -150.058, "eta_prime": 170.117, "theta_prime": -158.264, "eta_base": -153.204, "theta_base": -151.468, "v0": -2.192, "v1": -20.074, "v2": 33.340, "v3": -35.421, "v4": 23.771, "amplitude": 35.941, "phase_angle": 21.929, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.496, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 255.183, 262.448, 252.742 ], "x_axis": [ -0.937, 0.120, -0.327 ], "y_axis": [ 0.170, 0.977, -0.130 ], "z_axis": [ 0.304, -0.177, -0.936 ], "quaternion": [ 0.161, 0.074, 0.981, -0.078 ] } }, { "index": 668, "index_chain": 668, "chain_name": "a", "nt_resnum": 669, "nt_name": "A", "nt_code": "A", "nt_id": "///a/669", "linked_nts": [ "///a/668", "///a/670" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -69.680, "beta": 173.612, "gamma": 53.647, "delta": 81.196, "epsilon": -149.167, "zeta": -68.715, "epsilon_zeta": -80.452, "bb_type": "BI", "chi": -164.308, "glyco_bond": "anti", "C5prime_xyz": [ -1.550, 8.683, 0.753 ], "P_xyz": [ 0.981, 9.209, 1.085 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.985, "theta": -141.688, "eta_prime": 171.818, "theta_prime": -140.615, "eta_base": -165.605, "theta_base": -97.397, "v0": 0.428, "v1": -23.479, "v2": 36.225, "v3": -36.908, "v4": 22.975, "amplitude": 38.065, "phase_angle": 17.884, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.882, "filter_rmsd": 0.043, "frame": { "rmsd": 0.021, "origin": [ 256.627, 260.392, 249.614 ], "x_axis": [ -0.870, 0.492, -0.036 ], "y_axis": [ 0.492, 0.870, 0.028 ], "z_axis": [ 0.045, 0.007, -0.999 ], "quaternion": [ 0.021, 0.254, 0.967, 0.009 ] } }, { "index": 669, "index_chain": 669, "chain_name": "a", "nt_resnum": 670, "nt_name": "A", "nt_code": "A", "nt_id": "///a/670", "linked_nts": [ "///a/669", "///a/671" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -71.805, "beta": 167.775, "gamma": 63.308, "delta": 81.761, "epsilon": -148.429, "zeta": -77.245, "epsilon_zeta": -71.184, "bb_type": "BI", "chi": -168.590, "glyco_bond": "anti", "C5prime_xyz": [ -1.191, 8.551, 1.032 ], "P_xyz": [ 1.416, 8.797, 1.005 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.133, "theta": -148.424, "eta_prime": -176.899, "theta_prime": -148.845, "eta_base": -114.793, "theta_base": -146.662, "v0": 3.886, "v1": -25.723, "v2": 36.640, "v3": -35.362, "v4": 19.906, "amplitude": 37.576, "phase_angle": 12.819, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.804, "filter_rmsd": 0.042, "frame": { "rmsd": 0.014, "origin": [ 254.824, 261.068, 246.357 ], "x_axis": [ -0.276, 0.960, 0.053 ], "y_axis": [ 0.961, 0.276, 0.003 ], "z_axis": [ -0.012, 0.051, -0.999 ], "quaternion": [ -0.020, 0.601, 0.798, 0.017 ] } }, { "index": 670, "index_chain": 670, "chain_name": "a", "nt_resnum": 671, "nt_name": "U", "nt_code": "U", "nt_id": "///a/671", "linked_nts": [ "///a/670", "///a/672" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -67.658, "beta": 176.266, "gamma": 58.114, "delta": 82.087, "epsilon": -138.027, "zeta": -78.886, "epsilon_zeta": -59.142, "bb_type": "BI", "chi": -149.450, "glyco_bond": "anti", "C5prime_xyz": [ -1.672, 8.783, -0.111 ], "P_xyz": [ 0.848, 9.464, -0.215 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.217, "theta": -142.178, "eta_prime": -177.086, "theta_prime": -139.195, "eta_base": -165.018, "theta_base": -106.725, "v0": -1.256, "v1": -20.749, "v2": 33.513, "v3": -35.229, "v4": 23.020, "amplitude": 35.801, "phase_angle": 20.593, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.941, "filter_rmsd": 0.105, "frame": { "rmsd": 0.010, "origin": [ 252.768, 260.081, 243.818 ], "x_axis": [ 0.090, 0.991, 0.096 ], "y_axis": [ 0.964, -0.062, -0.260 ], "z_axis": [ -0.252, 0.116, -0.961 ], "quaternion": [ -0.129, 0.727, 0.673, -0.054 ] } }, { "index": 671, "index_chain": 671, "chain_name": "a", "nt_resnum": 672, "nt_name": "U", "nt_code": "U", "nt_id": "///a/672", "linked_nts": [ "///a/671", "///a/673" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -61.085, "beta": 162.665, "gamma": 59.844, "delta": 81.375, "epsilon": -143.412, "zeta": -79.997, "epsilon_zeta": -63.415, "bb_type": "BI", "chi": -158.885, "glyco_bond": "anti", "C5prime_xyz": [ -1.509, 8.794, 0.442 ], "P_xyz": [ 1.041, 9.284, 0.304 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.500, "theta": -147.252, "eta_prime": -173.447, "theta_prime": -147.720, "eta_base": -129.587, "theta_base": -129.817, "v0": -1.664, "v1": -21.099, "v2": 34.517, "v3": -36.415, "v4": 24.073, "amplitude": 37.005, "phase_angle": 21.129, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.842, "filter_rmsd": 0.110, "frame": { "rmsd": 0.013, "origin": [ 252.115, 262.831, 239.860 ], "x_axis": [ 0.715, 0.660, 0.232 ], "y_axis": [ 0.699, -0.675, -0.235 ], "z_axis": [ 0.002, 0.330, -0.944 ], "quaternion": [ -0.155, 0.913, 0.372, 0.064 ] } }, { "index": 672, "index_chain": 672, "chain_name": "a", "nt_resnum": 673, "nt_name": "U", "nt_code": "U", "nt_id": "///a/673", "linked_nts": [ "///a/672", "///a/674" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -65.594, "beta": 164.416, "gamma": 57.677, "delta": 79.199, "epsilon": -142.801, "zeta": -65.882, "epsilon_zeta": -76.919, "bb_type": "BI", "chi": -151.819, "glyco_bond": "anti", "C5prime_xyz": [ -1.774, 8.803, 0.001 ], "P_xyz": [ 0.726, 9.452, -0.377 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.295, "theta": -134.596, "eta_prime": 178.142, "theta_prime": -135.220, "eta_base": -151.125, "theta_base": -105.874, "v0": -0.998, "v1": -22.408, "v2": 35.950, "v3": -37.503, "v4": 24.287, "amplitude": 38.269, "phase_angle": 20.051, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.897, "filter_rmsd": 0.100, "frame": { "rmsd": 0.010, "origin": [ 251.589, 264.987, 237.229 ], "x_axis": [ 0.947, 0.254, 0.198 ], "y_axis": [ 0.319, -0.828, -0.461 ], "z_axis": [ 0.047, 0.500, -0.865 ], "quaternion": [ -0.252, 0.954, 0.150, 0.064 ] } }, { "index": 673, "index_chain": 673, "chain_name": "a", "nt_resnum": 674, "nt_name": "C", "nt_code": "C", "nt_id": "///a/674", "linked_nts": [ "///a/673", "///a/675" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -71.513, "beta": 175.335, "gamma": 58.670, "delta": 78.638, "epsilon": -151.838, "zeta": -78.350, "epsilon_zeta": -73.488, "bb_type": "BI", "chi": -145.114, "glyco_bond": "anti", "C5prime_xyz": [ -1.944, 8.901, -0.423 ], "P_xyz": [ 0.463, 9.852, -0.797 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.779, "theta": -154.998, "eta_prime": -179.220, "theta_prime": -153.567, "eta_base": -135.363, "theta_base": -125.505, "v0": -5.770, "v1": -18.043, "v2": 33.546, "v3": -37.752, "v4": 27.465, "amplitude": 37.699, "phase_angle": 27.149, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.905, "filter_rmsd": 0.057, "frame": { "rmsd": 0.009, "origin": [ 253.820, 267.575, 235.463 ], "x_axis": [ 0.890, -0.424, 0.166 ], "y_axis": [ -0.216, -0.713, -0.667 ], "z_axis": [ 0.401, 0.558, -0.726 ], "quaternion": [ -0.336, 0.912, -0.175, 0.155 ] } }, { "index": 674, "index_chain": 674, "chain_name": "a", "nt_resnum": 675, "nt_name": "C", "nt_code": "C", "nt_id": "///a/675", "linked_nts": [ "///a/674", "///a/676" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -62.263, "beta": 166.966, "gamma": 56.255, "delta": 78.555, "epsilon": -129.486, "zeta": -82.304, "epsilon_zeta": -47.182, "bb_type": "BI", "chi": -151.619, "glyco_bond": "anti", "C5prime_xyz": [ -1.611, 8.870, -0.008 ], "P_xyz": [ 0.920, 9.454, -0.273 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.340, "theta": -140.932, "eta_prime": -178.188, "theta_prime": -140.442, "eta_base": -142.567, "theta_base": -121.890, "v0": -1.414, "v1": -21.909, "v2": 35.643, "v3": -37.435, "v4": 24.503, "amplitude": 38.102, "phase_angle": 20.696, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.921, "filter_rmsd": 0.060, "frame": { "rmsd": 0.008, "origin": [ 256.631, 269.441, 233.191 ], "x_axis": [ 0.536, -0.844, -0.017 ], "y_axis": [ -0.608, -0.372, -0.702 ], "z_axis": [ 0.586, 0.386, -0.712 ], "quaternion": [ -0.336, 0.809, -0.449, 0.176 ] } }, { "index": 675, "index_chain": 675, "chain_name": "a", "nt_resnum": 676, "nt_name": "U", "nt_code": "U", "nt_id": "///a/676", "linked_nts": [ "///a/675", "///a/677" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -60.407, "beta": 165.170, "gamma": 47.872, "delta": 76.744, "epsilon": -155.404, "zeta": -85.029, "epsilon_zeta": -70.375, "bb_type": "BI", "chi": -150.750, "glyco_bond": "anti", "C5prime_xyz": [ -1.862, 8.838, -0.071 ], "P_xyz": [ 0.576, 9.710, -0.300 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.276, "theta": -164.781, "eta_prime": 169.870, "theta_prime": -163.298, "eta_base": -158.230, "theta_base": -146.411, "v0": -2.807, "v1": -21.465, "v2": 36.214, "v3": -38.872, "v4": 26.267, "amplitude": 39.237, "phase_angle": 22.638, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.707, "filter_rmsd": 0.101, "frame": { "rmsd": 0.009, "origin": [ 259.829, 269.915, 231.249 ], "x_axis": [ -0.105, -0.994, 0.029 ], "y_axis": [ -0.706, 0.054, -0.706 ], "z_axis": [ 0.700, -0.095, -0.708 ], "quaternion": [ 0.245, -0.622, 0.683, -0.293 ] } }, { "index": 676, "index_chain": 676, "chain_name": "a", "nt_resnum": 677, "nt_name": "G", "nt_code": "G", "nt_id": "///a/677", "linked_nts": [ "///a/676", "///a/678" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -57.046, "beta": 168.876, "gamma": 55.777, "delta": 78.840, "epsilon": -141.628, "zeta": -77.929, "epsilon_zeta": -63.699, "bb_type": "BI", "chi": -158.437, "glyco_bond": "anti", "C5prime_xyz": [ -1.519, 8.797, 0.385 ], "P_xyz": [ 1.023, 9.365, 0.218 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.358, "theta": -145.536, "eta_prime": -178.507, "theta_prime": -143.153, "eta_base": -156.260, "theta_base": -112.030, "v0": 0.679, "v1": -24.084, "v2": 37.040, "v3": -37.668, "v4": 23.298, "amplitude": 38.863, "phase_angle": 17.618, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.788, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 264.002, 269.456, 229.060 ], "x_axis": [ -0.457, -0.880, -0.127 ], "y_axis": [ -0.646, 0.427, -0.633 ], "z_axis": [ 0.611, -0.207, -0.764 ], "quaternion": [ 0.227, -0.469, 0.814, -0.258 ] } }, { "index": 677, "index_chain": 677, "chain_name": "a", "nt_resnum": 678, "nt_name": "U", "nt_code": "U", "nt_id": "///a/678", "linked_nts": [ "///a/677", "///a/679" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -61.795, "beta": 161.407, "gamma": 63.454, "delta": 81.543, "epsilon": -124.357, "zeta": -76.142, "epsilon_zeta": -48.214, "bb_type": "--", "chi": -143.357, "glyco_bond": "anti", "C5prime_xyz": [ -1.783, 8.765, -0.479 ], "P_xyz": [ 0.668, 9.252, -1.251 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.394, "theta": -125.766, "eta_prime": -171.117, "theta_prime": -121.165, "eta_base": -130.209, "theta_base": -72.346, "v0": -0.904, "v1": -21.449, "v2": 34.280, "v3": -35.772, "v4": 23.162, "amplitude": 36.479, "phase_angle": 19.995, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.769, "filter_rmsd": 0.104, "frame": { "rmsd": 0.009, "origin": [ 265.255, 267.336, 227.608 ], "x_axis": [ -0.754, -0.534, -0.383 ], "y_axis": [ -0.107, 0.675, -0.730 ], "z_axis": [ 0.648, -0.509, -0.566 ], "quaternion": [ 0.298, -0.185, 0.865, -0.358 ] } }, { "index": 678, "index_chain": 678, "chain_name": "a", "nt_resnum": 679, "nt_name": "G", "nt_code": "G", "nt_id": "///a/679", "linked_nts": [ "///a/678", "///a/680" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -53.759, "beta": 157.531, "gamma": 54.843, "delta": 82.920, "epsilon": -144.594, "zeta": -90.935, "epsilon_zeta": -53.659, "bb_type": "BI", "chi": -141.368, "glyco_bond": "anti", "C5prime_xyz": [ -1.283, 8.711, -0.563 ], "P_xyz": [ 1.236, 8.703, -1.265 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.879, "theta": -152.912, "eta_prime": -169.960, "theta_prime": -151.244, "eta_base": -107.092, "theta_base": -178.868, "v0": 2.491, "v1": -23.907, "v2": 35.081, "v3": -34.622, "v4": 20.280, "amplitude": 36.283, "phase_angle": 14.789, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.595, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 263.268, 265.847, 222.426 ], "x_axis": [ -0.657, 0.487, -0.575 ], "y_axis": [ 0.720, 0.632, -0.288 ], "z_axis": [ 0.223, -0.603, -0.766 ], "quaternion": [ 0.229, 0.345, 0.874, -0.255 ] } }, { "index": 679, "index_chain": 679, "chain_name": "a", "nt_resnum": 680, "nt_name": "U", "nt_code": "U", "nt_id": "///a/680", "linked_nts": [ "///a/679", "///a/681" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -44.445, "beta": 170.445, "gamma": 44.542, "delta": 142.410, "epsilon": -147.521, "zeta": -160.071, "epsilon_zeta": 12.550, "bb_type": "--", "chi": -120.618, "glyco_bond": "anti", "C5prime_xyz": [ -2.561, 8.558, -1.268 ], "P_xyz": [ -0.483, 10.045, -0.766 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.792, "theta": 177.594, "eta_prime": -162.310, "theta_prime": 170.486, "eta_base": 175.481, "theta_base": -171.878, "v0": -28.793, "v1": 40.356, "v2": -35.824, "v3": 20.163, "v4": 5.145, "amplitude": 39.909, "phase_angle": 153.851, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.478, "filter_rmsd": 0.099, "frame": { "rmsd": 0.009, "origin": [ 264.622, 261.244, 221.284 ], "x_axis": [ -0.719, 0.690, 0.079 ], "y_axis": [ 0.622, 0.691, -0.367 ], "z_axis": [ -0.308, -0.215, -0.927 ], "quaternion": [ -0.106, 0.359, 0.913, -0.159 ] } }, { "index": 680, "index_chain": 680, "chain_name": "a", "nt_resnum": 681, "nt_name": "A", "nt_code": "A", "nt_id": "///a/681", "linked_nts": [ "///a/680", "///a/682" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -71.003, "beta": 139.470, "gamma": 78.726, "delta": 142.683, "epsilon": -132.390, "zeta": -139.016, "epsilon_zeta": 6.626, "bb_type": "--", "chi": -128.560, "glyco_bond": "anti", "C5prime_xyz": [ -2.569, 8.649, -0.857 ], "P_xyz": [ -0.072, 9.248, -1.318 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -169.063, "theta": -160.820, "eta_prime": -151.837, "theta_prime": 172.412, "eta_base": -139.953, "theta_base": -171.712, "v0": -27.699, "v1": 39.552, "v2": -35.551, "v3": 20.523, "v4": 4.248, "amplitude": 39.220, "phase_angle": 155.020, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.012, "origin": [ 264.904, 257.800, 219.950 ], "x_axis": [ -0.556, 0.642, -0.528 ], "y_axis": [ 0.819, 0.314, -0.481 ], "z_axis": [ -0.143, -0.699, -0.700 ], "quaternion": [ 0.120, 0.456, 0.802, -0.368 ] } }, { "index": 681, "index_chain": 681, "chain_name": "a", "nt_resnum": 682, "nt_name": "G", "nt_code": "G", "nt_id": "///a/682", "linked_nts": [ "///a/681", "///a/683" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -75.219, "beta": 87.859, "gamma": 152.641, "delta": 81.814, "epsilon": -135.260, "zeta": -79.804, "epsilon_zeta": -55.456, "bb_type": "BI", "chi": -172.840, "glyco_bond": "anti", "C5prime_xyz": [ -1.360, 8.536, 1.269 ], "P_xyz": [ -1.445, 10.251, -0.720 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -119.269, "theta": 162.415, "eta_prime": -130.044, "theta_prime": 178.606, "eta_base": -106.922, "theta_base": -148.554, "v0": 3.029, "v1": -24.890, "v2": 36.055, "v3": -35.318, "v4": 20.400, "amplitude": 37.169, "phase_angle": 14.065, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 264.790, 250.627, 221.611 ], "x_axis": [ 0.089, -0.870, -0.485 ], "y_axis": [ 0.923, 0.255, -0.287 ], "z_axis": [ 0.374, -0.423, 0.826 ], "quaternion": [ 0.736, 0.046, 0.292, -0.609 ] } }, { "index": 682, "index_chain": 682, "chain_name": "a", "nt_resnum": 683, "nt_name": "C", "nt_code": "C", "nt_id": "///a/683", "linked_nts": [ "///a/682", "///a/684" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -72.288, "beta": 153.627, "gamma": 80.969, "delta": 80.945, "epsilon": -126.327, "zeta": -72.081, "epsilon_zeta": -54.247, "bb_type": "--", "chi": -154.064, "glyco_bond": "anti", "C5prime_xyz": [ -1.524, 8.834, 0.126 ], "P_xyz": [ 0.781, 9.247, -1.020 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.595, "theta": -127.701, "eta_prime": -168.434, "theta_prime": -127.229, "eta_base": -129.760, "theta_base": -84.801, "v0": -0.907, "v1": -22.223, "v2": 35.508, "v3": -36.988, "v4": 23.903, "amplitude": 37.764, "phase_angle": 19.907, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.091, "filter_rmsd": 0.062, "frame": { "rmsd": 0.010, "origin": [ 264.505, 248.255, 223.794 ], "x_axis": [ 0.593, -0.730, -0.339 ], "y_axis": [ 0.805, 0.532, 0.262 ], "z_axis": [ -0.011, -0.429, 0.903 ], "quaternion": [ 0.870, 0.199, 0.094, -0.441 ] } }, { "index": 683, "index_chain": 683, "chain_name": "a", "nt_resnum": 684, "nt_name": "G", "nt_code": "G", "nt_id": "///a/684", "linked_nts": [ "///a/683", "///a/685" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -63.625, "beta": 160.310, "gamma": 61.010, "delta": 81.052, "epsilon": -140.256, "zeta": -64.951, "epsilon_zeta": -75.306, "bb_type": "BI", "chi": -150.886, "glyco_bond": "anti", "C5prime_xyz": [ -1.651, 8.755, -0.033 ], "P_xyz": [ 0.843, 9.150, -0.679 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.348, "theta": -130.087, "eta_prime": -172.899, "theta_prime": -131.695, "eta_base": -111.776, "theta_base": -90.388, "v0": 0.866, "v1": -23.943, "v2": 36.629, "v3": -37.073, "v4": 22.859, "amplitude": 38.366, "phase_angle": 17.305, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.659, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 267.968, 245.016, 225.571 ], "x_axis": [ 0.967, 0.069, -0.246 ], "y_axis": [ 0.100, 0.785, 0.611 ], "z_axis": [ 0.235, -0.615, 0.752 ], "quaternion": [ 0.936, 0.328, 0.129, -0.008 ] } }, { "index": 684, "index_chain": 684, "chain_name": "a", "nt_resnum": 685, "nt_name": "G", "nt_code": "G", "nt_id": "///a/685", "linked_nts": [ "///a/684", "///a/686" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end,multiplet", "alpha": -72.469, "beta": 166.304, "gamma": 64.691, "delta": 75.877, "epsilon": -133.359, "zeta": -91.066, "epsilon_zeta": -42.292, "bb_type": "BI", "chi": -146.560, "glyco_bond": "anti", "C5prime_xyz": [ -1.604, 8.822, -0.316 ], "P_xyz": [ 0.789, 9.366, -1.172 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.728, "theta": -154.319, "eta_prime": -177.086, "theta_prime": -152.909, "eta_base": -117.712, "theta_base": -142.260, "v0": 0.906, "v1": -25.524, "v2": 39.189, "v3": -39.676, "v4": 24.420, "amplitude": 41.056, "phase_angle": 17.344, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.713, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 271.534, 244.002, 226.864 ], "x_axis": [ 0.736, 0.668, 0.110 ], "y_axis": [ -0.439, 0.347, 0.829 ], "z_axis": [ 0.516, -0.658, 0.548 ], "quaternion": [ 0.811, 0.458, 0.125, 0.341 ] } }, { "index": 685, "index_chain": 685, "chain_name": "a", "nt_resnum": 686, "nt_name": "U", "nt_code": "U", "nt_id": "///a/686", "linked_nts": [ "///a/685", "///a/687" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -53.889, "beta": 158.180, "gamma": 54.396, "delta": 76.783, "epsilon": -151.260, "zeta": -80.666, "epsilon_zeta": -70.595, "bb_type": "BI", "chi": -149.153, "glyco_bond": "anti", "C5prime_xyz": [ -1.862, 8.818, -0.171 ], "P_xyz": [ 0.575, 9.501, -0.726 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.772, "theta": -159.071, "eta_prime": 176.945, "theta_prime": 179.910, "eta_base": -162.978, "theta_base": 122.980, "v0": -1.782, "v1": -22.768, "v2": 37.298, "v3": -39.360, "v4": 25.943, "amplitude": 39.981, "phase_angle": 21.110, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.568, "filter_rmsd": 0.104, "frame": { "rmsd": 0.011, "origin": [ 274.468, 241.628, 228.303 ], "x_axis": [ 0.314, 0.940, 0.137 ], "y_axis": [ -0.587, 0.079, 0.806 ], "z_axis": [ 0.746, -0.333, 0.576 ], "quaternion": [ 0.702, 0.406, 0.217, 0.544 ] } }, { "index": 686, "index_chain": 686, "chain_name": "a", "nt_resnum": 687, "nt_name": "G", "nt_code": "G", "nt_id": "///a/687", "linked_nts": [ "///a/686", "///a/688" ], "nt_type": "RNA", "dbn": ".", "summary": "turn", "alpha": -57.418, "beta": -161.612, "gamma": -61.860, "delta": 77.555, "epsilon": -173.067, "zeta": 23.293, "epsilon_zeta": 163.640, "bb_type": "--", "chi": -43.419, "glyco_bond": "--", "C5prime_xyz": [ -4.243, 5.429, -3.088 ], "P_xyz": [ -5.481, 6.105, -5.287 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 84.302, "theta": -114.126, "eta_prime": 70.746, "theta_prime": -114.502, "eta_base": 43.416, "theta_base": -78.735, "v0": -2.726, "v1": -21.910, "v2": 36.562, "v3": -39.279, "v4": 26.462, "amplitude": 39.568, "phase_angle": 22.477, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 270.964, 230.818, 230.688 ], "x_axis": [ 0.128, 0.027, -0.991 ], "y_axis": [ 0.806, 0.580, 0.120 ], "z_axis": [ 0.578, -0.814, 0.053 ], "quaternion": [ 0.664, 0.352, 0.591, -0.293 ] } }, { "index": 687, "index_chain": 687, "chain_name": "a", "nt_resnum": 688, "nt_name": "A", "nt_code": "A", "nt_id": "///a/688", "linked_nts": [ "///a/687", "///a/689" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": 170.343, "beta": 148.796, "gamma": 121.669, "delta": 85.403, "epsilon": -147.366, "zeta": -40.035, "epsilon_zeta": -107.332, "bb_type": "BI", "chi": -166.321, "glyco_bond": "anti", "C5prime_xyz": [ -1.071, 8.514, 0.956 ], "P_xyz": [ 0.768, 9.533, -0.599 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 120.119, "theta": -131.015, "eta_prime": 167.744, "theta_prime": -140.210, "eta_base": -140.413, "theta_base": -114.361, "v0": 5.624, "v1": -25.596, "v2": 34.631, "v3": -32.336, "v4": 16.955, "amplitude": 35.125, "phase_angle": 9.623, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.010, "origin": [ 269.114, 233.990, 228.920 ], "x_axis": [ -0.499, 0.225, 0.837 ], "y_axis": [ 0.801, 0.489, 0.346 ], "z_axis": [ -0.331, 0.843, -0.424 ], "quaternion": [ -0.376, 0.330, 0.777, 0.383 ] } }, { "index": 688, "index_chain": 688, "chain_name": "a", "nt_resnum": 689, "nt_name": "A", "nt_code": "A", "nt_id": "///a/689", "linked_nts": [ "///a/688", "///a/690" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical", "alpha": -136.410, "beta": 145.160, "gamma": 135.666, "delta": 83.230, "epsilon": -134.286, "zeta": -74.348, "epsilon_zeta": -59.938, "bb_type": "BI", "chi": -175.161, "glyco_bond": "anti", "C5prime_xyz": [ -1.256, 8.388, 1.433 ], "P_xyz": [ 0.279, 10.015, 0.057 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.948, "theta": -159.645, "eta_prime": -168.975, "theta_prime": -155.772, "eta_base": -117.521, "theta_base": -108.572, "v0": 5.765, "v1": -26.868, "v2": 36.551, "v3": -34.214, "v4": 17.974, "amplitude": 37.099, "phase_angle": 9.861, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.038, "frame": { "rmsd": 0.010, "origin": [ 265.671, 236.804, 228.995 ], "x_axis": [ -0.004, 0.578, 0.816 ], "y_axis": [ 0.906, 0.347, -0.242 ], "z_axis": [ -0.423, 0.738, -0.525 ], "quaternion": [ -0.452, 0.542, 0.685, 0.181 ] } }, { "index": 689, "index_chain": 689, "chain_name": "a", "nt_resnum": 690, "nt_name": "A", "nt_code": "A", "nt_id": "///a/690", "linked_nts": [ "///a/689", "///a/691" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end,multiplet", "alpha": -71.017, "beta": 164.107, "gamma": 62.487, "delta": 82.148, "epsilon": -148.890, "zeta": -77.058, "epsilon_zeta": -71.831, "bb_type": "BI", "chi": -159.993, "glyco_bond": "anti", "C5prime_xyz": [ -1.179, 8.565, 0.511 ], "P_xyz": [ 1.401, 8.687, 0.018 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.923, "theta": -145.749, "eta_prime": -178.654, "theta_prime": -147.690, "eta_base": -114.013, "theta_base": -132.180, "v0": 6.848, "v1": -28.221, "v2": 37.767, "v3": -34.766, "v4": 17.635, "amplitude": 38.184, "phase_angle": 8.481, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.767, "filter_rmsd": 0.040, "frame": { "rmsd": 0.017, "origin": [ 264.068, 239.919, 229.195 ], "x_axis": [ 0.583, 0.735, 0.346 ], "y_axis": [ 0.541, -0.033, -0.841 ], "z_axis": [ -0.607, 0.677, -0.416 ], "quaternion": [ 0.532, -0.713, -0.447, 0.091 ] } }, { "index": 690, "index_chain": 690, "chain_name": "a", "nt_resnum": 691, "nt_name": "U", "nt_code": "U", "nt_id": "///a/691", "linked_nts": [ "///a/690", "///a/692" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -63.464, "beta": 172.638, "gamma": 56.558, "delta": 81.442, "epsilon": -131.071, "zeta": -49.062, "epsilon_zeta": -82.009, "bb_type": "BI", "chi": -163.323, "glyco_bond": "anti", "C5prime_xyz": [ -1.365, 8.701, 0.741 ], "P_xyz": [ 1.219, 9.063, 0.973 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.984, "theta": -108.052, "eta_prime": -175.836, "theta_prime": -101.803, "eta_base": -147.585, "theta_base": -67.109, "v0": 2.102, "v1": -24.584, "v2": 36.516, "v3": -36.209, "v4": 21.497, "amplitude": 37.881, "phase_angle": 15.430, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.962, "filter_rmsd": 0.106, "frame": { "rmsd": 0.009, "origin": [ 261.511, 242.794, 229.314 ], "x_axis": [ 0.898, 0.441, -0.002 ], "y_axis": [ 0.171, -0.351, -0.921 ], "z_axis": [ -0.407, 0.826, -0.391 ], "quaternion": [ 0.537, -0.812, -0.188, 0.126 ] } }, { "index": 691, "index_chain": 691, "chain_name": "a", "nt_resnum": 692, "nt_name": "G", "nt_code": "G", "nt_id": "///a/692", "linked_nts": [ "///a/691", "///a/693" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -78.380, "beta": 172.943, "gamma": 75.133, "delta": 79.073, "epsilon": -133.061, "zeta": -75.276, "epsilon_zeta": -57.785, "bb_type": "BI", "chi": -176.436, "glyco_bond": "anti", "C5prime_xyz": [ -1.302, 8.481, 1.467 ], "P_xyz": [ 1.285, 8.844, 1.402 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.013, "theta": -136.032, "eta_prime": -158.295, "theta_prime": -133.858, "eta_base": -95.454, "theta_base": -99.024, "v0": 4.457, "v1": -27.464, "v2": 38.895, "v3": -37.329, "v4": 20.707, "amplitude": 39.810, "phase_angle": 12.307, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.208, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 264.814, 248.141, 224.176 ], "x_axis": [ 0.514, -0.338, -0.788 ], "y_axis": [ -0.715, -0.676, -0.176 ], "z_axis": [ -0.474, 0.654, -0.590 ], "quaternion": [ -0.249, 0.834, -0.316, -0.378 ] } }, { "index": 692, "index_chain": 692, "chain_name": "a", "nt_resnum": 693, "nt_name": "C", "nt_code": "C", "nt_id": "///a/693", "linked_nts": [ "///a/692", "///a/694" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -58.527, "beta": 170.363, "gamma": 54.454, "delta": 79.812, "epsilon": -147.987, "zeta": -73.995, "epsilon_zeta": -73.992, "bb_type": "BI", "chi": -160.823, "glyco_bond": "anti", "C5prime_xyz": [ -1.388, 8.756, 0.565 ], "P_xyz": [ 1.194, 9.132, 0.653 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.006, "theta": -114.925, "eta_prime": -174.469, "theta_prime": -129.801, "eta_base": -121.326, "theta_base": -115.192, "v0": 1.359, "v1": -24.517, "v2": 37.100, "v3": -37.264, "v4": 22.598, "amplitude": 38.709, "phase_angle": 16.576, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.839, "filter_rmsd": 0.068, "frame": { "rmsd": 0.010, "origin": [ 265.285, 250.131, 220.829 ], "x_axis": [ -0.076, -0.733, -0.676 ], "y_axis": [ -0.927, -0.198, 0.319 ], "z_axis": [ -0.368, 0.651, -0.664 ], "quaternion": [ -0.124, 0.668, -0.621, -0.391 ] } }, { "index": 693, "index_chain": 693, "chain_name": "a", "nt_resnum": 694, "nt_name": "G", "nt_code": "G", "nt_id": "///a/694", "linked_nts": [ "///a/693", "///a/695" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 134.575, "beta": -170.077, "gamma": -166.266, "delta": 78.854, "epsilon": -130.401, "zeta": -119.513, "epsilon_zeta": -10.888, "bb_type": "--", "chi": -170.168, "glyco_bond": "anti", "C5prime_xyz": [ -1.201, 8.514, 1.126 ], "P_xyz": [ -0.201, 10.673, 0.056 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.398, "theta": 141.574, "eta_prime": 166.447, "theta_prime": 158.723, "eta_base": -156.172, "theta_base": 154.718, "v0": 7.103, "v1": -30.148, "v2": 40.667, "v3": -37.598, "v4": 19.254, "amplitude": 41.163, "phase_angle": 8.900, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.456, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 266.317, 250.954, 217.119 ], "x_axis": [ -0.381, -0.880, -0.283 ], "y_axis": [ -0.860, 0.226, 0.457 ], "z_axis": [ -0.338, 0.418, -0.843 ], "quaternion": [ -0.018, -0.556, 0.783, 0.279 ] } }, { "index": 694, "index_chain": 694, "chain_name": "a", "nt_resnum": 695, "nt_name": "U", "nt_code": "U", "nt_id": "///a/695", "linked_nts": [ "///a/694", "///a/696" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -60.161, "beta": -179.345, "gamma": 37.975, "delta": 83.567, "epsilon": -148.682, "zeta": 147.587, "epsilon_zeta": 63.731, "bb_type": "--", "chi": -146.857, "glyco_bond": "anti", "C5prime_xyz": [ -1.716, 8.794, -0.275 ], "P_xyz": [ 0.665, 9.819, 0.106 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.344, "theta": 87.286, "eta_prime": 164.613, "theta_prime": 43.044, "eta_base": 141.663, "theta_base": -38.273, "v0": -2.799, "v1": -18.330, "v2": 31.121, "v3": -33.625, "v4": 23.005, "amplitude": 33.865, "phase_angle": 23.224, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "7a", "suiteness": 0.542, "filter_rmsd": 0.102, "frame": { "rmsd": 0.008, "origin": [ 269.065, 257.578, 213.646 ], "x_axis": [ 0.100, -0.982, 0.161 ], "y_axis": [ -0.942, -0.041, 0.334 ], "z_axis": [ -0.322, -0.185, -0.929 ], "quaternion": [ 0.181, 0.719, -0.669, -0.056 ] } }, { "index": 695, "index_chain": 695, "chain_name": "a", "nt_resnum": 696, "nt_name": "A", "nt_code": "A", "nt_id": "///a/696", "linked_nts": [ "///a/695", "///a/697" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": 44.215, "beta": -131.215, "gamma": 69.874, "delta": 145.846, "epsilon": -110.752, "zeta": -58.540, "epsilon_zeta": -52.213, "bb_type": "--", "chi": -103.979, "glyco_bond": "anti", "C5prime_xyz": [ -2.121, 8.104, -2.011 ], "P_xyz": [ 0.175, 9.118, -1.290 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 9.992, "theta": -29.874, "eta_prime": 40.237, "theta_prime": -46.317, "eta_base": 110.404, "theta_base": -10.846, "v0": -21.175, "v1": 34.750, "v2": -34.248, "v3": 22.919, "v4": -1.280, "amplitude": 35.765, "phase_angle": 163.249, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.036, "frame": { "rmsd": 0.010, "origin": [ 251.624, 255.338, 213.215 ], "x_axis": [ 0.361, -0.812, -0.459 ], "y_axis": [ 0.919, 0.392, 0.029 ], "z_axis": [ 0.156, -0.433, 0.888 ], "quaternion": [ 0.813, 0.142, 0.189, -0.533 ] } }, { "index": 696, "index_chain": 696, "chain_name": "a", "nt_resnum": 697, "nt_name": "G", "nt_code": "G", "nt_id": "///a/697", "linked_nts": [ "///a/696", "///a/698" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -106.099, "beta": -149.776, "gamma": 108.026, "delta": 146.122, "epsilon": -130.310, "zeta": 137.782, "epsilon_zeta": 91.908, "bb_type": "--", "chi": -116.151, "glyco_bond": "anti", "C5prime_xyz": [ -1.962, 8.507, -1.420 ], "P_xyz": [ 0.648, 8.697, -1.545 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -177.036, "theta": 136.624, "eta_prime": -116.204, "theta_prime": 114.699, "eta_base": -124.917, "theta_base": 146.967, "v0": -22.048, "v1": 35.521, "v2": -34.708, "v3": 22.894, "v4": -0.699, "amplitude": 36.422, "phase_angle": 162.356, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.008, "frame": { "rmsd": 0.008, "origin": [ 266.120, 263.206, 214.542 ], "x_axis": [ -0.332, 0.448, -0.830 ], "y_axis": [ -0.912, 0.072, 0.404 ], "z_axis": [ 0.241, 0.891, 0.385 ], "quaternion": [ 0.530, -0.230, 0.505, 0.641 ] } }, { "index": 697, "index_chain": 697, "chain_name": "a", "nt_resnum": 698, "nt_name": "A", "nt_code": "A", "nt_id": "///a/698", "linked_nts": [ "///a/697", "///a/699" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -70.079, "beta": 154.600, "gamma": 41.016, "delta": 81.831, "epsilon": -135.270, "zeta": -72.248, "epsilon_zeta": -63.023, "bb_type": "BI", "chi": 176.713, "glyco_bond": "anti", "C5prime_xyz": [ -1.379, 8.300, 1.859 ], "P_xyz": [ 1.096, 8.212, 2.694 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -175.465, "theta": -130.794, "eta_prime": 175.639, "theta_prime": -127.931, "eta_base": -170.658, "theta_base": -93.092, "v0": 3.002, "v1": -24.702, "v2": 35.784, "v3": -35.036, "v4": 20.209, "amplitude": 36.886, "phase_angle": 14.040, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.873, "filter_rmsd": 0.042, "frame": { "rmsd": 0.012, "origin": [ 268.675, 258.711, 223.411 ], "x_axis": [ 0.284, 0.783, -0.554 ], "y_axis": [ -0.956, 0.188, -0.224 ], "z_axis": [ -0.071, 0.593, 0.802 ], "quaternion": [ 0.754, -0.271, 0.160, 0.577 ] } }, { "index": 698, "index_chain": 698, "chain_name": "a", "nt_resnum": 699, "nt_name": "U", "nt_code": "U", "nt_id": "///a/699", "linked_nts": [ "///a/698", "///a/700" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -64.499, "beta": 168.126, "gamma": 57.205, "delta": 79.928, "epsilon": -137.020, "zeta": -49.524, "epsilon_zeta": -87.496, "bb_type": "BI", "chi": -169.777, "glyco_bond": "anti", "C5prime_xyz": [ -1.407, 8.635, 1.117 ], "P_xyz": [ 1.180, 8.971, 1.344 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.004, "theta": -113.258, "eta_prime": -175.165, "theta_prime": -109.368, "eta_base": -120.421, "theta_base": -64.711, "v0": 2.457, "v1": -25.704, "v2": 37.902, "v3": -37.416, "v4": 21.984, "amplitude": 39.238, "phase_angle": 14.991, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.884, "filter_rmsd": 0.105, "frame": { "rmsd": 0.013, "origin": [ 270.078, 261.844, 225.585 ], "x_axis": [ -0.444, 0.743, -0.501 ], "y_axis": [ -0.894, -0.408, 0.187 ], "z_axis": [ -0.066, 0.531, 0.845 ], "quaternion": [ 0.498, -0.172, 0.218, 0.821 ] } }, { "index": 699, "index_chain": 699, "chain_name": "a", "nt_resnum": 700, "nt_name": "A", "nt_code": "A", "nt_id": "///a/700", "linked_nts": [ "///a/699", "///a/701" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -79.797, "beta": 172.833, "gamma": 69.649, "delta": 82.531, "epsilon": -126.592, "zeta": -71.866, "epsilon_zeta": -54.726, "bb_type": "--", "chi": -178.673, "glyco_bond": "anti", "C5prime_xyz": [ -1.487, 8.457, 1.594 ], "P_xyz": [ 1.091, 8.770, 1.984 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.062, "theta": -122.826, "eta_prime": -163.534, "theta_prime": -120.859, "eta_base": -91.872, "theta_base": -72.662, "v0": 1.349, "v1": -23.344, "v2": 35.302, "v3": -35.416, "v4": 21.472, "amplitude": 36.819, "phase_angle": 16.506, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.383, "filter_rmsd": 0.044, "frame": { "rmsd": 0.014, "origin": [ 265.899, 266.543, 226.785 ], "x_axis": [ -0.960, -0.188, -0.207 ], "y_axis": [ 0.077, -0.890, 0.450 ], "z_axis": [ -0.269, 0.416, 0.869 ], "quaternion": [ -0.069, -0.123, 0.225, 0.964 ] } }, { "index": 700, "index_chain": 700, "chain_name": "a", "nt_resnum": 701, "nt_name": "U", "nt_code": "U", "nt_id": "///a/701", "linked_nts": [ "///a/700", "///a/702" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -52.821, "beta": 161.939, "gamma": 45.322, "delta": 78.643, "epsilon": -137.743, "zeta": -89.209, "epsilon_zeta": -48.534, "bb_type": "BI", "chi": -158.684, "glyco_bond": "anti", "C5prime_xyz": [ -1.606, 8.816, 0.444 ], "P_xyz": [ 0.951, 9.372, 0.651 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.373, "theta": -154.922, "eta_prime": -177.684, "theta_prime": -155.137, "eta_base": -107.936, "theta_base": -148.550, "v0": -1.509, "v1": -21.943, "v2": 35.885, "v3": -37.692, "v4": 24.677, "amplitude": 38.384, "phase_angle": 20.792, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.616, "filter_rmsd": 0.107, "frame": { "rmsd": 0.010, "origin": [ 262.337, 267.158, 228.509 ], "x_axis": [ -0.530, -0.832, 0.165 ], "y_axis": [ 0.741, -0.360, 0.567 ], "z_axis": [ -0.412, 0.423, 0.807 ], "quaternion": [ -0.479, -0.075, 0.301, 0.821 ] } }, { "index": 701, "index_chain": 701, "chain_name": "a", "nt_resnum": 702, "nt_name": "A", "nt_code": "A", "nt_id": "///a/702", "linked_nts": [ "///a/701", "///a/703" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -69.072, "beta": 157.886, "gamma": 62.133, "delta": 77.813, "epsilon": -151.711, "zeta": -73.908, "epsilon_zeta": -77.803, "bb_type": "BI", "chi": -169.952, "glyco_bond": "anti", "C5prime_xyz": [ -1.920, 8.733, 1.018 ], "P_xyz": [ 0.554, 9.534, 1.046 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.130, "theta": -150.375, "eta_prime": 169.715, "theta_prime": -152.699, "eta_base": -172.732, "theta_base": -129.885, "v0": -4.397, "v1": -19.692, "v2": 34.921, "v3": -38.405, "v4": 27.010, "amplitude": 38.532, "phase_angle": 25.001, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.636, "filter_rmsd": 0.041, "frame": { "rmsd": 0.013, "origin": [ 259.949, 269.828, 230.200 ], "x_axis": [ -0.093, -0.996, -0.010 ], "y_axis": [ 0.864, -0.086, 0.496 ], "z_axis": [ -0.495, 0.038, 0.868 ], "quaternion": [ 0.650, 0.176, -0.187, -0.715 ] } }, { "index": 702, "index_chain": 702, "chain_name": "a", "nt_resnum": 703, "nt_name": "G", "nt_code": "G", "nt_id": "///a/703", "linked_nts": [ "///a/702", "///a/704" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -67.543, "beta": 175.603, "gamma": 51.259, "delta": 76.903, "epsilon": -147.060, "zeta": -72.622, "epsilon_zeta": -74.438, "bb_type": "BI", "chi": -167.830, "glyco_bond": "anti", "C5prime_xyz": [ -1.644, 8.746, 0.951 ], "P_xyz": [ 0.835, 9.447, 1.425 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.344, "theta": -148.469, "eta_prime": 174.012, "theta_prime": -146.400, "eta_base": -148.523, "theta_base": -120.019, "v0": 0.382, "v1": -24.496, "v2": 38.037, "v3": -38.814, "v4": 24.242, "amplitude": 40.009, "phase_angle": 18.063, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.918, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 256.568, 269.584, 232.077 ], "x_axis": [ 0.432, -0.890, 0.144 ], "y_axis": [ 0.789, 0.451, 0.417 ], "z_axis": [ -0.437, -0.067, 0.897 ], "quaternion": [ 0.834, 0.145, -0.174, -0.504 ] } }, { "index": 703, "index_chain": 703, "chain_name": "a", "nt_resnum": 704, "nt_name": "G", "nt_code": "G", "nt_id": "///a/704", "linked_nts": [ "///a/703", "///a/705" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -64.625, "beta": 168.555, "gamma": 60.171, "delta": 76.989, "epsilon": -150.877, "zeta": -82.338, "epsilon_zeta": -68.538, "bb_type": "BI", "chi": -170.414, "glyco_bond": "anti", "C5prime_xyz": [ -1.734, 8.767, 1.079 ], "P_xyz": [ 0.760, 9.512, 1.332 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.805, "theta": -157.896, "eta_prime": -177.773, "theta_prime": -156.347, "eta_base": -137.484, "theta_base": -130.247, "v0": -2.161, "v1": -22.034, "v2": 36.531, "v3": -38.699, "v4": 25.810, "amplitude": 39.305, "phase_angle": 21.654, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.859, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 254.256, 267.481, 234.268 ], "x_axis": [ 0.834, -0.509, 0.214 ], "y_axis": [ 0.437, 0.846, 0.307 ], "z_axis": [ -0.337, -0.162, 0.927 ], "quaternion": [ 0.950, 0.123, -0.145, -0.249 ] } }, { "index": 704, "index_chain": 704, "chain_name": "a", "nt_resnum": 705, "nt_name": "A", "nt_code": "A", "nt_id": "///a/705", "linked_nts": [ "///a/704", "///a/706" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -56.171, "beta": 164.173, "gamma": 54.483, "delta": 80.164, "epsilon": -142.131, "zeta": -85.472, "epsilon_zeta": -56.659, "bb_type": "BI", "chi": -168.527, "glyco_bond": "anti", "C5prime_xyz": [ -1.399, 8.588, 1.032 ], "P_xyz": [ 1.187, 8.913, 1.211 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.184, "theta": -150.087, "eta_prime": -176.580, "theta_prime": -148.427, "eta_base": -139.430, "theta_base": -125.701, "v0": 2.550, "v1": -25.155, "v2": 37.074, "v3": -36.541, "v4": 21.467, "amplitude": 38.359, "phase_angle": 14.873, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.823, "filter_rmsd": 0.040, "frame": { "rmsd": 0.014, "origin": [ 252.661, 265.431, 236.898 ], "x_axis": [ 0.933, -0.005, 0.359 ], "y_axis": [ -0.055, 0.986, 0.157 ], "z_axis": [ -0.354, -0.166, 0.920 ], "quaternion": [ 0.980, 0.082, -0.182, 0.013 ] } }, { "index": 705, "index_chain": 705, "chain_name": "a", "nt_resnum": 706, "nt_name": "A", "nt_code": "A", "nt_id": "///a/706", "linked_nts": [ "///a/705", "///a/707" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -52.400, "beta": 159.025, "gamma": 56.893, "delta": 80.671, "epsilon": -137.708, "zeta": -76.988, "epsilon_zeta": -60.720, "bb_type": "BI", "chi": -153.573, "glyco_bond": "anti", "C5prime_xyz": [ -1.316, 8.706, 0.136 ], "P_xyz": [ 1.236, 8.980, -0.320 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.308, "theta": -140.130, "eta_prime": -172.646, "theta_prime": -139.795, "eta_base": -138.428, "theta_base": -106.148, "v0": 3.077, "v1": -25.423, "v2": 36.861, "v3": -36.029, "v4": 20.841, "amplitude": 37.996, "phase_angle": 14.040, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.718, "filter_rmsd": 0.038, "frame": { "rmsd": 0.014, "origin": [ 252.150, 263.511, 239.512 ], "x_axis": [ 0.731, 0.446, 0.517 ], "y_axis": [ -0.585, 0.799, 0.138 ], "z_axis": [ -0.352, -0.404, 0.845 ], "quaternion": [ 0.918, 0.147, -0.237, 0.281 ] } }, { "index": 706, "index_chain": 706, "chain_name": "a", "nt_resnum": 707, "nt_name": "G", "nt_code": "G", "nt_id": "///a/707", "linked_nts": [ "///a/706", "///a/708" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -64.414, "beta": 159.694, "gamma": 63.199, "delta": 81.343, "epsilon": -143.408, "zeta": -96.264, "epsilon_zeta": -47.145, "bb_type": "BI", "chi": -147.078, "glyco_bond": "anti", "C5prime_xyz": [ -1.363, 8.764, -0.270 ], "P_xyz": [ 1.100, 9.022, -1.113 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.759, "theta": -162.314, "eta_prime": -175.442, "theta_prime": -163.179, "eta_base": -126.273, "theta_base": -148.814, "v0": 1.887, "v1": -24.267, "v2": 36.138, "v3": -35.964, "v4": 21.561, "amplitude": 37.548, "phase_angle": 15.752, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.757, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 252.651, 263.021, 242.864 ], "x_axis": [ 0.286, 0.854, 0.436 ], "y_axis": [ -0.956, 0.288, 0.063 ], "z_axis": [ -0.071, -0.434, 0.898 ], "quaternion": [ 0.786, 0.158, -0.161, 0.575 ] } }, { "index": 707, "index_chain": 707, "chain_name": "a", "nt_resnum": 708, "nt_name": "G", "nt_code": "G", "nt_id": "///a/708", "linked_nts": [ "///a/707", "///a/709" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -61.394, "beta": 148.798, "gamma": 66.022, "delta": 80.946, "epsilon": -121.811, "zeta": -88.042, "epsilon_zeta": -33.769, "bb_type": "--", "chi": -148.568, "glyco_bond": "anti", "C5prime_xyz": [ -1.197, 8.706, -0.168 ], "P_xyz": [ 1.173, 8.625, -1.273 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.261, "theta": -145.398, "eta_prime": -178.470, "theta_prime": -152.322, "eta_base": -156.580, "theta_base": -141.800, "v0": 5.243, "v1": -27.312, "v2": 37.842, "v3": -35.829, "v4": 19.325, "amplitude": 38.548, "phase_angle": 10.981, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.387, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 252.759, 261.128, 246.073 ], "x_axis": [ -0.064, 0.905, 0.420 ], "y_axis": [ -0.992, -0.102, 0.069 ], "z_axis": [ 0.105, -0.412, 0.905 ], "quaternion": [ 0.659, 0.182, -0.119, 0.720 ] } }, { "index": 708, "index_chain": 708, "chain_name": "a", "nt_resnum": 709, "nt_name": "A", "nt_code": "A", "nt_id": "///a/709", "linked_nts": [ "///a/708", "///a/710" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -93.551, "beta": 136.277, "gamma": 87.502, "delta": 70.938, "epsilon": 73.716, "zeta": 75.779, "epsilon_zeta": -2.063, "bb_type": "--", "chi": -170.514, "glyco_bond": "anti", "C5prime_xyz": [ -1.156, 8.419, 1.100 ], "P_xyz": [ 0.866, 8.882, -0.477 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -179.000, "theta": -128.536, "eta_prime": -169.681, "theta_prime": -142.777, "eta_base": -145.480, "theta_base": -125.497, "v0": 9.639, "v1": -32.923, "v2": 42.903, "v3": -38.297, "v4": 18.117, "amplitude": 43.139, "phase_angle": 5.989, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.017, "origin": [ 253.426, 260.026, 249.549 ], "x_axis": [ -0.411, 0.907, 0.091 ], "y_axis": [ -0.909, -0.415, 0.025 ], "z_axis": [ 0.060, -0.073, 0.996 ], "quaternion": [ 0.541, 0.045, -0.014, 0.840 ] } }, { "index": 709, "index_chain": 709, "chain_name": "a", "nt_resnum": 710, "nt_name": "A", "nt_code": "A", "nt_id": "///a/710", "linked_nts": [ "///a/709", "///a/711" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": 77.656, "beta": -155.824, "gamma": 171.429, "delta": 79.644, "epsilon": -137.740, "zeta": -62.717, "epsilon_zeta": -75.023, "bb_type": "BI", "chi": -152.357, "glyco_bond": "anti", "C5prime_xyz": [ -1.511, 8.695, 0.008 ], "P_xyz": [ -0.440, 9.805, -2.096 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 140.071, "theta": -149.761, "eta_prime": 170.008, "theta_prime": -143.642, "eta_base": -148.514, "theta_base": -104.899, "v0": 3.518, "v1": -26.946, "v2": 38.870, "v3": -37.754, "v4": 21.561, "amplitude": 39.985, "phase_angle": 13.559, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.015, "origin": [ 254.626, 261.092, 252.317 ], "x_axis": [ -0.714, 0.598, 0.364 ], "y_axis": [ -0.522, -0.801, 0.293 ], "z_axis": [ 0.467, 0.019, 0.884 ], "quaternion": [ 0.304, 0.225, 0.085, 0.922 ] } }, { "index": 710, "index_chain": 710, "chain_name": "a", "nt_resnum": 711, "nt_name": "C", "nt_code": "C", "nt_id": "///a/711", "linked_nts": [ "///a/710", "///a/712" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix", "alpha": -77.971, "beta": 168.987, "gamma": 92.333, "delta": 140.438, "epsilon": -115.606, "zeta": 122.396, "epsilon_zeta": 121.998, "bb_type": "--", "chi": -121.602, "glyco_bond": "anti", "C5prime_xyz": [ -2.386, 8.617, -1.262 ], "P_xyz": [ -0.012, 9.402, -1.988 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -161.137, "theta": 121.225, "eta_prime": -130.195, "theta_prime": 127.459, "eta_base": -89.696, "theta_base": 156.507, "v0": -28.260, "v1": 38.429, "v2": -33.379, "v3": 17.988, "v4": 6.229, "amplitude": 37.851, "phase_angle": 151.866, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.010, "filter_rmsd": 0.059, "frame": { "rmsd": 0.014, "origin": [ 253.316, 262.985, 254.846 ], "x_axis": [ -0.993, -0.035, 0.109 ], "y_axis": [ 0.082, -0.881, 0.466 ], "z_axis": [ 0.080, 0.471, 0.878 ], "quaternion": [ -0.030, 0.049, 0.242, 0.969 ] } }, { "index": 711, "index_chain": 711, "chain_name": "a", "nt_resnum": 712, "nt_name": "A", "nt_code": "A", "nt_id": "///a/712", "linked_nts": [ "///a/711", "///a/713" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 161.540, "beta": -150.959, "gamma": 166.841, "delta": 78.217, "epsilon": -111.297, "zeta": -49.712, "epsilon_zeta": -61.585, "bb_type": "--", "chi": -172.569, "glyco_bond": "anti", "C5prime_xyz": [ -1.599, 8.623, 1.235 ], "P_xyz": [ 0.208, 10.034, 0.036 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -140.544, "theta": -113.762, "eta_prime": -166.300, "theta_prime": -111.372, "eta_base": -167.340, "theta_base": -55.977, "v0": -0.912, "v1": -22.703, "v2": 36.464, "v3": -37.985, "v4": 24.548, "amplitude": 38.793, "phase_angle": 19.953, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.010, "origin": [ 266.947, 263.468, 256.047 ], "x_axis": [ -0.378, 0.682, 0.626 ], "y_axis": [ -0.693, -0.657, 0.298 ], "z_axis": [ 0.615, -0.321, 0.721 ], "quaternion": [ 0.414, 0.374, -0.007, 0.830 ] } }, { "index": 712, "index_chain": 712, "chain_name": "a", "nt_resnum": 713, "nt_name": "C", "nt_code": "C", "nt_id": "///a/713", "linked_nts": [ "///a/712", "///a/714" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -77.192, "beta": 172.225, "gamma": 58.465, "delta": 80.027, "epsilon": -117.625, "zeta": -63.448, "epsilon_zeta": -54.177, "bb_type": "--", "chi": -143.646, "glyco_bond": "anti", "C5prime_xyz": [ -1.911, 8.868, -0.517 ], "P_xyz": [ 0.526, 9.740, -0.920 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 151.995, "theta": -113.211, "eta_prime": -176.345, "theta_prime": -107.720, "eta_base": -102.011, "theta_base": -63.808, "v0": -5.740, "v1": -17.813, "v2": 33.056, "v3": -37.313, "v4": 27.168, "amplitude": 37.184, "phase_angle": 27.255, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.244, "filter_rmsd": 0.062, "frame": { "rmsd": 0.012, "origin": [ 263.968, 264.649, 260.858 ], "x_axis": [ -0.946, -0.262, 0.191 ], "y_axis": [ 0.257, -0.965, -0.051 ], "z_axis": [ 0.197, 0.001, 0.980 ], "quaternion": [ -0.132, 0.098, -0.013, 0.986 ] } }, { "index": 713, "index_chain": 713, "chain_name": "a", "nt_resnum": 714, "nt_name": "C", "nt_code": "C", "nt_id": "///a/714", "linked_nts": [ "///a/713", "///a/715" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -79.255, "beta": 164.550, "gamma": 74.467, "delta": 85.194, "epsilon": -136.192, "zeta": 19.723, "epsilon_zeta": 204.085, "bb_type": "--", "chi": -157.389, "glyco_bond": "anti", "C5prime_xyz": [ -1.459, 8.842, 0.310 ], "P_xyz": [ 1.079, 9.255, -0.136 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.740, "theta": -23.381, "eta_prime": -168.918, "theta_prime": -64.219, "eta_base": -111.845, "theta_base": -92.212, "v0": -4.567, "v1": -17.021, "v2": 30.689, "v3": -34.161, "v4": 24.469, "amplitude": 34.160, "phase_angle": 26.053, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.183, "filter_rmsd": 0.066, "frame": { "rmsd": 0.012, "origin": [ 260.449, 259.302, 263.960 ], "x_axis": [ -0.153, -0.751, -0.643 ], "y_axis": [ 0.979, -0.205, 0.007 ], "z_axis": [ -0.136, -0.628, 0.766 ], "quaternion": [ 0.593, 0.267, 0.213, -0.729 ] } }, { "index": 714, "index_chain": 714, "chain_name": "a", "nt_resnum": 715, "nt_name": "A", "nt_code": "A", "nt_id": "///a/715", "linked_nts": [ "///a/714", "///a/716" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 141.179, "beta": 166.318, "gamma": 76.687, "delta": 141.595, "epsilon": -67.480, "zeta": 95.735, "epsilon_zeta": 196.785, "bb_type": "--", "chi": -153.448, "glyco_bond": "anti", "C5prime_xyz": [ -1.973, 8.680, 0.499 ], "P_xyz": [ 0.423, 9.100, 1.402 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 74.310, "theta": 101.773, "eta_prime": 124.877, "theta_prime": 69.787, "eta_base": 135.840, "theta_base": 81.890, "v0": -23.315, "v1": 35.002, "v2": -32.626, "v3": 20.077, "v4": 1.799, "amplitude": 35.124, "phase_angle": 158.261, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.038, "frame": { "rmsd": 0.017, "origin": [ 260.201, 255.872, 264.814 ], "x_axis": [ -0.375, 0.781, 0.499 ], "y_axis": [ 0.828, 0.041, 0.559 ], "z_axis": [ 0.417, 0.623, -0.662 ], "quaternion": [ -0.028, 0.558, 0.721, 0.410 ] } }, { "index": 715, "index_chain": 715, "chain_name": "a", "nt_resnum": 716, "nt_name": "G", "nt_code": "G", "nt_id": "///a/716", "linked_nts": [ "///a/715", "///a/717" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BI,non-canonical,helix-end", "alpha": -173.294, "beta": 142.253, "gamma": 86.091, "delta": 77.218, "epsilon": -162.138, "zeta": -101.218, "epsilon_zeta": -60.920, "bb_type": "BI", "chi": 66.632, "glyco_bond": "syn", "C5prime_xyz": [ -5.392, 4.879, 1.929 ], "P_xyz": [ -4.849, 3.648, 4.180 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 119.533, "theta": -166.993, "eta_prime": 118.927, "theta_prime": 153.481, "eta_base": 154.142, "theta_base": -166.474, "v0": -9.719, "v1": -14.801, "v2": 32.130, "v3": -38.679, "v4": 30.470, "amplitude": 38.284, "phase_angle": 32.939, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 262.394, 252.669, 268.899 ], "x_axis": [ -0.409, 0.797, 0.445 ], "y_axis": [ 0.808, 0.089, 0.582 ], "z_axis": [ 0.424, 0.598, -0.680 ], "quaternion": [ -0.007, 0.544, 0.738, 0.400 ] } }, { "index": 716, "index_chain": 716, "chain_name": "a", "nt_resnum": 717, "nt_name": "U", "nt_code": "U", "nt_id": "///a/717", "linked_nts": [ "///a/716", "///a/718" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,non-stack", "alpha": 165.131, "beta": 167.402, "gamma": 16.950, "delta": 146.730, "epsilon": -61.327, "zeta": -32.777, "epsilon_zeta": -28.550, "bb_type": "--", "chi": -71.985, "glyco_bond": "--", "C5prime_xyz": [ -3.635, 6.981, -2.786 ], "P_xyz": [ -2.075, 8.656, -4.042 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 26.446, "theta": 18.874, "eta_prime": 39.973, "theta_prime": 1.798, "eta_base": -60.220, "theta_base": 43.075, "v0": -26.883, "v1": 40.079, "v2": -37.050, "v3": 22.584, "v4": 2.496, "amplitude": 40.058, "phase_angle": 157.654, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.103, "frame": { "rmsd": 0.012, "origin": [ 268.423, 237.588, 273.877 ], "x_axis": [ 0.807, -0.327, -0.492 ], "y_axis": [ 0.300, 0.944, -0.136 ], "z_axis": [ 0.509, -0.038, 0.860 ], "quaternion": [ 0.950, -0.026, 0.263, -0.165 ] } }, { "index": 717, "index_chain": 717, "chain_name": "a", "nt_resnum": 718, "nt_name": "G", "nt_code": "G", "nt_id": "///a/718", "linked_nts": [ "///a/717", "///a/719" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -96.934, "beta": -129.968, "gamma": 27.775, "delta": 76.525, "epsilon": -160.885, "zeta": -78.215, "epsilon_zeta": -82.670, "bb_type": "BI", "chi": -168.934, "glyco_bond": "anti", "C5prime_xyz": [ -1.738, 8.744, 0.941 ], "P_xyz": [ -0.234, 9.639, 2.871 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 118.938, "theta": -177.960, "eta_prime": 142.840, "theta_prime": -165.519, "eta_base": 130.689, "theta_base": -137.444, "v0": 0.335, "v1": -25.356, "v2": 39.140, "v3": -39.922, "v4": 24.946, "amplitude": 41.158, "phase_angle": 18.016, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 259.826, 250.921, 269.742 ], "x_axis": [ 0.103, -0.767, -0.633 ], "y_axis": [ 0.808, -0.307, 0.504 ], "z_axis": [ -0.580, -0.563, 0.588 ], "quaternion": [ 0.588, 0.453, 0.022, -0.669 ] } }, { "index": 718, "index_chain": 718, "chain_name": "a", "nt_resnum": 719, "nt_name": "G", "nt_code": "G", "nt_id": "///a/719", "linked_nts": [ "///a/718", "///a/720" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -65.093, "beta": 167.744, "gamma": 75.046, "delta": 84.112, "epsilon": -136.045, "zeta": -80.811, "epsilon_zeta": -55.234, "bb_type": "BI", "chi": -170.477, "glyco_bond": "anti", "C5prime_xyz": [ -1.603, 8.680, 1.131 ], "P_xyz": [ 0.965, 9.182, 1.133 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -171.472, "theta": -140.595, "eta_prime": -162.736, "theta_prime": -141.433, "eta_base": -139.965, "theta_base": -112.329, "v0": -1.558, "v1": -19.990, "v2": 32.619, "v3": -34.439, "v4": 22.705, "amplitude": 34.960, "phase_angle": 21.087, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.299, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 255.686, 249.723, 270.693 ], "x_axis": [ 0.393, -0.852, -0.346 ], "y_axis": [ 0.711, 0.042, 0.702 ], "z_axis": [ -0.584, -0.522, 0.622 ], "quaternion": [ 0.717, 0.427, -0.083, -0.545 ] } }, { "index": 719, "index_chain": 719, "chain_name": "a", "nt_resnum": 720, "nt_name": "C", "nt_code": "C", "nt_id": "///a/720", "linked_nts": [ "///a/719", "///a/721" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end", "alpha": -62.045, "beta": 164.045, "gamma": 53.499, "delta": 82.065, "epsilon": -146.222, "zeta": -72.307, "epsilon_zeta": -73.915, "bb_type": "BI", "chi": -148.900, "glyco_bond": "anti", "C5prime_xyz": [ -1.612, 8.841, -0.165 ], "P_xyz": [ 0.916, 9.383, -0.401 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.483, "theta": -141.811, "eta_prime": -179.902, "theta_prime": -141.597, "eta_base": -135.801, "theta_base": -109.545, "v0": -1.999, "v1": -20.633, "v2": 34.027, "v3": -36.164, "v4": 24.114, "amplitude": 36.619, "phase_angle": 21.686, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.847, "filter_rmsd": 0.064, "frame": { "rmsd": 0.015, "origin": [ 253.787, 247.527, 271.258 ], "x_axis": [ 0.729, -0.674, 0.120 ], "y_axis": [ 0.206, 0.384, 0.900 ], "z_axis": [ -0.653, -0.632, 0.419 ], "quaternion": [ 0.796, 0.481, -0.243, -0.277 ] } }, { "index": 720, "index_chain": 720, "chain_name": "a", "nt_resnum": 721, "nt_name": "G", "nt_code": "G", "nt_id": "///a/721", "linked_nts": [ "///a/720", "///a/722" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -68.962, "beta": 171.446, "gamma": 58.055, "delta": 79.146, "epsilon": -127.684, "zeta": -54.449, "epsilon_zeta": -73.234, "bb_type": "--", "chi": -157.055, "glyco_bond": "anti", "C5prime_xyz": [ -1.300, 8.781, 0.354 ], "P_xyz": [ 1.262, 9.236, 0.266 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.158, "theta": -104.914, "eta_prime": -177.099, "theta_prime": -151.533, "eta_base": -133.608, "theta_base": 157.241, "v0": 1.770, "v1": -25.076, "v2": 37.566, "v3": -37.521, "v4": 22.595, "amplitude": 39.091, "phase_angle": 16.054, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.949, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 252.549, 243.518, 273.397 ], "x_axis": [ 0.860, -0.086, 0.503 ], "y_axis": [ -0.287, 0.733, 0.617 ], "z_axis": [ -0.422, -0.675, 0.605 ], "quaternion": [ 0.894, 0.361, -0.259, 0.056 ] } }, { "index": 721, "index_chain": 721, "chain_name": "a", "nt_resnum": 722, "nt_name": "A", "nt_code": "A", "nt_id": "///a/722", "linked_nts": [ "///a/721", "///a/723" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI,non-canonical", "alpha": 179.027, "beta": 131.271, "gamma": 52.790, "delta": 81.569, "epsilon": -141.637, "zeta": -69.815, "epsilon_zeta": -71.823, "bb_type": "BI", "chi": -153.789, "glyco_bond": "anti", "C5prime_xyz": [ -1.848, 8.829, 0.112 ], "P_xyz": [ 0.719, 9.017, -0.310 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 14.006, "theta": -128.697, "eta_prime": 48.887, "theta_prime": -138.485, "eta_base": 30.517, "theta_base": -111.940, "v0": -5.032, "v1": -17.746, "v2": 32.294, "v3": -36.156, "v4": 25.994, "amplitude": 36.068, "phase_angle": 26.445, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.527, "filter_rmsd": 0.041, "frame": { "rmsd": 0.014, "origin": [ 240.502, 242.245, 274.551 ], "x_axis": [ -0.231, 0.903, -0.363 ], "y_axis": [ 0.713, 0.411, 0.568 ], "z_axis": [ 0.662, -0.127, -0.739 ], "quaternion": [ 0.332, 0.523, 0.772, 0.143 ] } }, { "index": 722, "index_chain": 722, "chain_name": "a", "nt_resnum": 723, "nt_name": "A", "nt_code": "A", "nt_id": "///a/723", "linked_nts": [ "///a/722", "///a/724" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -112.444, "beta": 166.668, "gamma": 86.054, "delta": 79.581, "epsilon": -144.423, "zeta": -72.599, "epsilon_zeta": -71.824, "bb_type": "BI", "chi": -157.876, "glyco_bond": "anti", "C5prime_xyz": [ -1.591, 8.722, 0.322 ], "P_xyz": [ 0.718, 9.323, -0.730 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 145.882, "theta": -144.176, "eta_prime": 164.595, "theta_prime": -146.340, "eta_base": -147.948, "theta_base": -114.202, "v0": 0.633, "v1": -24.437, "v2": 37.597, "v3": -38.208, "v4": 23.706, "amplitude": 39.457, "phase_angle": 17.662, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.042, "frame": { "rmsd": 0.018, "origin": [ 242.161, 242.966, 271.555 ], "x_axis": [ 0.028, 0.966, 0.258 ], "y_axis": [ 0.834, -0.165, 0.527 ], "z_axis": [ 0.551, 0.200, -0.810 ], "quaternion": [ 0.115, 0.707, 0.636, 0.286 ] } }, { "index": 723, "index_chain": 723, "chain_name": "a", "nt_resnum": 724, "nt_name": "G", "nt_code": "G", "nt_id": "///a/724", "linked_nts": [ "///a/723", "///a/725" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -70.239, "beta": 172.044, "gamma": 64.476, "delta": 81.861, "epsilon": -152.921, "zeta": -6.638, "epsilon_zeta": -146.283, "bb_type": "--", "chi": -171.991, "glyco_bond": "anti", "C5prime_xyz": [ -1.299, 8.608, 1.249 ], "P_xyz": [ 1.266, 8.924, 1.558 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.467, "theta": -85.881, "eta_prime": -174.157, "theta_prime": -81.640, "eta_base": -124.801, "theta_base": -50.739, "v0": 1.341, "v1": -23.726, "v2": 35.710, "v3": -35.897, "v4": 21.861, "amplitude": 37.256, "phase_angle": 16.565, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.771, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 244.242, 246.228, 268.685 ], "x_axis": [ 0.331, 0.487, 0.808 ], "y_axis": [ 0.531, -0.804, 0.267 ], "z_axis": [ 0.780, 0.341, -0.525 ], "quaternion": [ -0.023, 0.816, 0.312, 0.487 ] } }, { "index": 724, "index_chain": 724, "chain_name": "a", "nt_resnum": 725, "nt_name": "G", "nt_code": "G", "nt_id": "///a/725", "linked_nts": [ "///a/724", "///a/726" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -132.713, "beta": 158.470, "gamma": 122.132, "delta": 85.998, "epsilon": -138.471, "zeta": -75.548, "epsilon_zeta": -62.923, "bb_type": "BI", "chi": -165.188, "glyco_bond": "anti", "C5prime_xyz": [ -0.900, 8.470, 0.886 ], "P_xyz": [ 1.025, 9.320, -0.654 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.001, "theta": -149.398, "eta_prime": -143.643, "theta_prime": -150.668, "eta_base": -69.593, "theta_base": -126.218, "v0": 8.155, "v1": -28.631, "v2": 37.145, "v3": -33.392, "v4": 16.012, "amplitude": 37.371, "phase_angle": 6.298, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 252.688, 246.879, 271.931 ], "x_axis": [ 0.829, -0.558, 0.037 ], "y_axis": [ -0.335, -0.548, -0.767 ], "z_axis": [ 0.449, 0.623, -0.641 ], "quaternion": [ -0.400, 0.868, -0.257, 0.140 ] } }, { "index": 725, "index_chain": 725, "chain_name": "a", "nt_resnum": 726, "nt_name": "C", "nt_code": "C", "nt_id": "///a/726", "linked_nts": [ "///a/725", "///a/727" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end", "alpha": -57.676, "beta": 160.859, "gamma": 63.987, "delta": 81.280, "epsilon": -118.122, "zeta": -58.350, "epsilon_zeta": -59.772, "bb_type": "--", "chi": -139.036, "glyco_bond": "anti", "C5prime_xyz": [ -1.757, 8.791, -0.753 ], "P_xyz": [ 0.657, 9.216, -1.664 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -179.389, "theta": -111.441, "eta_prime": -163.628, "theta_prime": -123.153, "eta_base": -127.513, "theta_base": -133.424, "v0": -2.876, "v1": -19.843, "v2": 33.689, "v3": -36.278, "v4": 24.719, "amplitude": 36.601, "phase_angle": 23.008, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.720, "filter_rmsd": 0.066, "frame": { "rmsd": 0.015, "origin": [ 255.039, 248.311, 271.489 ], "x_axis": [ 0.673, -0.612, -0.414 ], "y_axis": [ -0.470, 0.078, -0.879 ], "z_axis": [ 0.570, 0.787, -0.235 ], "quaternion": [ 0.616, -0.677, 0.400, -0.058 ] } }, { "index": 726, "index_chain": 726, "chain_name": "a", "nt_resnum": 727, "nt_name": "G", "nt_code": "G", "nt_id": "///a/727", "linked_nts": [ "///a/726", "///a/728" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -160.863, "beta": 116.129, "gamma": -166.677, "delta": 146.371, "epsilon": -99.165, "zeta": -134.133, "epsilon_zeta": 34.968, "bb_type": "--", "chi": -105.954, "glyco_bond": "anti", "C5prime_xyz": [ -2.440, 8.247, -1.828 ], "P_xyz": [ -3.141, 9.342, -4.097 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -139.371, "theta": -165.956, "eta_prime": -140.322, "theta_prime": -158.772, "eta_base": -153.658, "theta_base": 176.644, "v0": -23.037, "v1": 36.969, "v2": -36.084, "v3": 23.705, "v4": -0.623, "amplitude": 37.900, "phase_angle": 162.190, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 260.522, 253.518, 268.460 ], "x_axis": [ 0.512, -0.823, -0.245 ], "y_axis": [ -0.558, -0.102, -0.824 ], "z_axis": [ 0.653, 0.558, -0.512 ], "quaternion": [ -0.474, 0.729, -0.474, 0.140 ] } }, { "index": 727, "index_chain": 727, "chain_name": "a", "nt_resnum": 728, "nt_name": "A", "nt_code": "A", "nt_id": "///a/728", "linked_nts": [ "///a/727", "///a/729" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 26.854, "beta": 164.927, "gamma": 48.759, "delta": 84.238, "epsilon": -131.972, "zeta": -81.309, "epsilon_zeta": -50.663, "bb_type": "BI", "chi": 175.753, "glyco_bond": "anti", "C5prime_xyz": [ -1.442, 8.295, 1.906 ], "P_xyz": [ 0.963, 8.244, 2.926 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -102.866, "theta": -136.969, "eta_prime": -77.365, "theta_prime": -134.407, "eta_base": -26.571, "theta_base": -106.649, "v0": 0.874, "v1": -21.800, "v2": 33.235, "v3": -33.677, "v4": 20.738, "amplitude": 34.798, "phase_angle": 17.240, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "8d", "suiteness": 0.170, "filter_rmsd": 0.044, "frame": { "rmsd": 0.016, "origin": [ 250.360, 265.156, 258.556 ], "x_axis": [ -0.742, -0.620, -0.255 ], "y_axis": [ 0.583, -0.784, 0.211 ], "z_axis": [ -0.331, 0.008, 0.944 ], "quaternion": [ -0.323, -0.157, 0.059, 0.931 ] } }, { "index": 728, "index_chain": 728, "chain_name": "a", "nt_resnum": 729, "nt_name": "C", "nt_code": "C", "nt_id": "///a/729", "linked_nts": [ "///a/728", "///a/730" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -66.346, "beta": 168.169, "gamma": 52.740, "delta": 80.787, "epsilon": -149.436, "zeta": -72.232, "epsilon_zeta": -77.204, "bb_type": "BI", "chi": -163.194, "glyco_bond": "anti", "C5prime_xyz": [ -1.297, 8.750, 0.713 ], "P_xyz": [ 1.289, 9.036, 0.927 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.230, "theta": -144.381, "eta_prime": 176.219, "theta_prime": -143.952, "eta_base": -139.510, "theta_base": -123.687, "v0": 1.157, "v1": -24.034, "v2": 36.583, "v3": -36.843, "v4": 22.462, "amplitude": 38.225, "phase_angle": 16.856, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.799, "filter_rmsd": 0.068, "frame": { "rmsd": 0.011, "origin": [ 248.122, 266.103, 260.938 ], "x_axis": [ -0.244, -0.969, -0.047 ], "y_axis": [ 0.891, -0.243, 0.384 ], "z_axis": [ -0.383, 0.052, 0.922 ], "quaternion": [ 0.599, 0.139, -0.140, -0.776 ] } }, { "index": 729, "index_chain": 729, "chain_name": "a", "nt_resnum": 730, "nt_name": "C", "nt_code": "C", "nt_id": "///a/730", "linked_nts": [ "///a/729", "///a/731" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-stack,canonical,helix,stem", "alpha": -72.426, "beta": -179.028, "gamma": 56.074, "delta": 81.625, "epsilon": -156.621, "zeta": -79.438, "epsilon_zeta": -77.183, "bb_type": "BI", "chi": -164.379, "glyco_bond": "anti", "C5prime_xyz": [ -1.435, 8.789, 0.744 ], "P_xyz": [ 1.073, 9.285, 1.256 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.534, "theta": -156.482, "eta_prime": 178.281, "theta_prime": -156.354, "eta_base": -147.546, "theta_base": -141.357, "v0": -0.763, "v1": -22.496, "v2": 35.813, "v3": -37.127, "v4": 23.882, "amplitude": 38.019, "phase_angle": 19.613, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.933, "filter_rmsd": 0.067, "frame": { "rmsd": 0.011, "origin": [ 245.188, 265.991, 263.606 ], "x_axis": [ 0.353, -0.927, -0.126 ], "y_axis": [ 0.889, 0.291, 0.354 ], "z_axis": [ -0.291, -0.237, 0.927 ], "quaternion": [ 0.802, 0.184, -0.052, -0.566 ] } }, { "index": 730, "index_chain": 730, "chain_name": "a", "nt_resnum": 731, "nt_name": "A", "nt_code": "A", "nt_id": "///a/731", "linked_nts": [ "///a/730", "///a/732" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -63.353, "beta": 164.475, "gamma": 61.186, "delta": 81.901, "epsilon": -145.583, "zeta": -64.516, "epsilon_zeta": -81.067, "bb_type": "BI", "chi": -170.467, "glyco_bond": "anti", "C5prime_xyz": [ -1.635, 8.652, 1.088 ], "P_xyz": [ 0.927, 9.168, 1.307 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.130, "theta": -132.729, "eta_prime": -177.434, "theta_prime": -132.666, "eta_base": -150.903, "theta_base": -86.403, "v0": -1.646, "v1": -20.765, "v2": 33.988, "v3": -35.782, "v4": 23.641, "amplitude": 36.424, "phase_angle": 21.071, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.831, "filter_rmsd": 0.039, "frame": { "rmsd": 0.013, "origin": [ 242.409, 265.255, 265.944 ], "x_axis": [ 0.681, -0.732, -0.011 ], "y_axis": [ 0.682, 0.629, 0.374 ], "z_axis": [ -0.267, -0.262, 0.927 ], "quaternion": [ 0.900, 0.177, -0.071, -0.393 ] } }, { "index": 731, "index_chain": 731, "chain_name": "a", "nt_resnum": 732, "nt_name": "C", "nt_code": "C", "nt_id": "///a/732", "linked_nts": [ "///a/731", "///a/733" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -72.318, "beta": 168.465, "gamma": 62.653, "delta": 82.354, "epsilon": -100.167, "zeta": -137.219, "epsilon_zeta": 37.051, "bb_type": "--", "chi": -159.218, "glyco_bond": "anti", "C5prime_xyz": [ -1.461, 8.847, 0.433 ], "P_xyz": [ 1.119, 9.334, 0.307 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.968, "theta": -132.636, "eta_prime": -166.358, "theta_prime": -140.529, "eta_base": -105.774, "theta_base": -145.542, "v0": -2.104, "v1": -20.234, "v2": 33.665, "v3": -35.688, "v4": 23.853, "amplitude": 36.254, "phase_angle": 21.786, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.813, "filter_rmsd": 0.063, "frame": { "rmsd": 0.010, "origin": [ 243.091, 262.498, 268.377 ], "x_axis": [ 0.952, -0.053, 0.300 ], "y_axis": [ -0.073, 0.916, 0.395 ], "z_axis": [ -0.296, -0.398, 0.868 ], "quaternion": [ 0.967, 0.205, -0.154, 0.005 ] } }, { "index": 732, "index_chain": 732, "chain_name": "a", "nt_resnum": 733, "nt_name": "C", "nt_code": "C", "nt_id": "///a/733", "linked_nts": [ "///a/732", "///a/734" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 97.123, "beta": -108.699, "gamma": -173.666, "delta": 80.609, "epsilon": -112.721, "zeta": -76.187, "epsilon_zeta": -36.534, "bb_type": "--", "chi": -149.765, "glyco_bond": "anti", "C5prime_xyz": [ -1.562, 8.843, -0.090 ], "P_xyz": [ -0.740, 9.208, -2.536 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.314, "theta": -140.767, "eta_prime": 168.576, "theta_prime": -141.092, "eta_base": 175.324, "theta_base": -107.738, "v0": -0.359, "v1": -22.046, "v2": 34.827, "v3": -35.964, "v4": 22.924, "amplitude": 36.865, "phase_angle": 19.141, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.065, "frame": { "rmsd": 0.010, "origin": [ 241.897, 260.849, 270.108 ], "x_axis": [ 0.958, 0.149, 0.246 ], "y_axis": [ -0.280, 0.686, 0.671 ], "z_axis": [ -0.069, -0.712, 0.699 ], "quaternion": [ 0.914, 0.378, -0.086, 0.117 ] } }, { "index": 733, "index_chain": 733, "chain_name": "a", "nt_resnum": 734, "nt_name": "U", "nt_code": "U", "nt_id": "///a/734", "linked_nts": [ "///a/733", "///a/735" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -54.924, "beta": 163.470, "gamma": 47.368, "delta": 77.364, "epsilon": -166.876, "zeta": -93.784, "epsilon_zeta": -73.092, "bb_type": "BI", "chi": -139.377, "glyco_bond": "anti", "C5prime_xyz": [ -1.993, 8.796, -0.731 ], "P_xyz": [ 0.402, 9.646, -1.321 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.208, "theta": 177.901, "eta_prime": 177.737, "theta_prime": 179.149, "eta_base": -132.023, "theta_base": -165.936, "v0": -4.979, "v1": -19.464, "v2": 35.082, "v3": -38.944, "v4": 27.695, "amplitude": 38.960, "phase_angle": 25.782, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.341, "filter_rmsd": 0.102, "frame": { "rmsd": 0.013, "origin": [ 244.952, 260.109, 273.789 ], "x_axis": [ 0.449, 0.876, 0.178 ], "y_axis": [ -0.792, 0.297, 0.534 ], "z_axis": [ 0.415, -0.381, 0.826 ], "quaternion": [ 0.802, 0.285, 0.074, 0.520 ] } }, { "index": 734, "index_chain": 734, "chain_name": "a", "nt_resnum": 735, "nt_name": "G", "nt_code": "G", "nt_id": "///a/735", "linked_nts": [ "///a/734", "///a/736" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -64.833, "beta": 174.036, "gamma": 62.382, "delta": 79.873, "epsilon": -139.776, "zeta": -76.304, "epsilon_zeta": -63.472, "bb_type": "BI", "chi": -164.421, "glyco_bond": "anti", "C5prime_xyz": [ -1.261, 8.650, 0.755 ], "P_xyz": [ 1.295, 9.071, 0.625 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.731, "theta": -144.922, "eta_prime": 178.321, "theta_prime": -142.540, "eta_base": -168.835, "theta_base": -111.839, "v0": 3.511, "v1": -26.814, "v2": 38.602, "v3": -37.626, "v4": 21.532, "amplitude": 39.722, "phase_angle": 13.642, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "&a", "suiteness": 0.750, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 247.246, 255.809, 278.325 ], "x_axis": [ 0.228, 0.971, 0.074 ], "y_axis": [ -0.958, 0.210, 0.193 ], "z_axis": [ 0.172, -0.115, 0.978 ], "quaternion": [ 0.777, 0.099, 0.031, 0.620 ] } }, { "index": 735, "index_chain": 735, "chain_name": "a", "nt_resnum": 736, "nt_name": "G", "nt_code": "G", "nt_id": "///a/736", "linked_nts": [ "///a/735", "///a/737" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -76.228, "beta": 159.616, "gamma": 76.016, "delta": 80.752, "epsilon": -150.431, "zeta": -79.072, "epsilon_zeta": -71.359, "bb_type": "BI", "chi": -165.550, "glyco_bond": "anti", "C5prime_xyz": [ -1.299, 8.591, 0.830 ], "P_xyz": [ 1.149, 8.960, 0.011 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.799, "theta": -149.762, "eta_prime": -175.850, "theta_prime": -153.131, "eta_base": -126.692, "theta_base": -137.503, "v0": 5.307, "v1": -27.870, "v2": 38.636, "v3": -36.504, "v4": 19.681, "amplitude": 39.352, "phase_angle": 10.951, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.259, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 249.097, 256.891, 281.596 ], "x_axis": [ -0.357, 0.918, 0.173 ], "y_axis": [ -0.889, -0.391, 0.240 ], "z_axis": [ 0.288, -0.068, 0.955 ], "quaternion": [ 0.549, 0.140, 0.052, 0.822 ] } }, { "index": 736, "index_chain": 736, "chain_name": "a", "nt_resnum": 737, "nt_name": "A", "nt_code": "A", "nt_id": "///a/737", "linked_nts": [ "///a/736", "///a/738" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -58.080, "beta": 163.939, "gamma": 67.668, "delta": 81.963, "epsilon": -163.353, "zeta": -83.931, "epsilon_zeta": -79.422, "bb_type": "BI", "chi": -170.954, "glyco_bond": "anti", "C5prime_xyz": [ -1.423, 8.600, 1.150 ], "P_xyz": [ 1.171, 8.975, 1.159 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.552, "theta": -125.981, "eta_prime": -165.987, "theta_prime": -130.730, "eta_base": -133.097, "theta_base": -90.330, "v0": 0.396, "v1": -22.261, "v2": 34.444, "v3": -35.149, "v4": 21.961, "amplitude": 36.218, "phase_angle": 18.005, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.623, "filter_rmsd": 0.040, "frame": { "rmsd": 0.010, "origin": [ 251.702, 257.837, 284.862 ], "x_axis": [ -0.736, 0.634, 0.237 ], "y_axis": [ -0.632, -0.769, 0.096 ], "z_axis": [ 0.243, -0.080, 0.967 ], "quaternion": [ 0.340, 0.129, 0.004, 0.932 ] } }, { "index": 737, "index_chain": 737, "chain_name": "a", "nt_resnum": 738, "nt_name": "C", "nt_code": "C", "nt_id": "///a/738", "linked_nts": [ "///a/737", "///a/739" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem", "alpha": 173.929, "beta": -134.763, "gamma": 150.195, "delta": 80.742, "epsilon": -109.413, "zeta": -90.604, "epsilon_zeta": -18.809, "bb_type": "--", "chi": -154.469, "glyco_bond": "anti", "C5prime_xyz": [ -1.417, 8.806, 0.205 ], "P_xyz": [ 0.539, 9.085, -1.481 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.886, "theta": -133.310, "eta_prime": -169.924, "theta_prime": -135.521, "eta_base": -111.711, "theta_base": -113.953, "v0": 1.097, "v1": -23.805, "v2": 36.250, "v3": -36.602, "v4": 22.390, "amplitude": 37.904, "phase_angle": 16.991, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.022, "filter_rmsd": 0.067, "frame": { "rmsd": 0.012, "origin": [ 251.157, 259.393, 288.180 ], "x_axis": [ -0.847, -0.044, 0.530 ], "y_axis": [ 0.164, -0.970, 0.182 ], "z_axis": [ 0.506, 0.241, 0.828 ], "quaternion": [ -0.054, 0.271, 0.111, 0.955 ] } }, { "index": 738, "index_chain": 738, "chain_name": "a", "nt_resnum": 739, "nt_name": "U", "nt_code": "U", "nt_id": "///a/739", "linked_nts": [ "///a/738", "///a/740" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -44.582, "beta": 157.289, "gamma": 38.530, "delta": 77.626, "epsilon": -153.981, "zeta": -80.602, "epsilon_zeta": -73.380, "bb_type": "BI", "chi": -141.476, "glyco_bond": "anti", "C5prime_xyz": [ -2.047, 8.794, -0.620 ], "P_xyz": [ 0.391, 9.646, -0.982 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.372, "theta": -158.295, "eta_prime": 173.110, "theta_prime": -160.319, "eta_base": -149.126, "theta_base": -144.587, "v0": -5.149, "v1": -19.079, "v2": 34.647, "v3": -38.588, "v4": 27.584, "amplitude": 38.582, "phase_angle": 26.101, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.118, "filter_rmsd": 0.102, "frame": { "rmsd": 0.011, "origin": [ 250.822, 260.101, 292.284 ], "x_axis": [ -0.787, -0.616, 0.031 ], "y_axis": [ 0.617, -0.786, 0.039 ], "z_axis": [ 0.000, 0.050, 0.999 ], "quaternion": [ -0.326, 0.008, 0.023, 0.945 ] } }, { "index": 739, "index_chain": 739, "chain_name": "a", "nt_resnum": 740, "nt_name": "G", "nt_code": "G", "nt_id": "///a/740", "linked_nts": [ "///a/739", "///a/741" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -62.266, "beta": 164.416, "gamma": 56.557, "delta": 77.597, "epsilon": -145.912, "zeta": -82.850, "epsilon_zeta": -63.062, "bb_type": "BI", "chi": -160.895, "glyco_bond": "anti", "C5prime_xyz": [ -1.599, 8.930, 0.509 ], "P_xyz": [ 0.894, 9.676, 0.555 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.460, "theta": -156.492, "eta_prime": 174.359, "theta_prime": -156.050, "eta_base": -160.115, "theta_base": -132.029, "v0": -3.948, "v1": -20.095, "v2": 35.071, "v3": -38.323, "v4": 26.659, "amplitude": 38.494, "phase_angle": 24.344, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.863, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 249.843, 260.886, 296.071 ], "x_axis": [ -0.445, -0.811, -0.380 ], "y_axis": [ 0.876, -0.482, 0.003 ], "z_axis": [ -0.186, -0.331, 0.925 ], "quaternion": [ -0.499, -0.167, -0.097, 0.844 ] } }, { "index": 740, "index_chain": 740, "chain_name": "a", "nt_resnum": 741, "nt_name": "A", "nt_code": "A", "nt_id": "///a/741", "linked_nts": [ "///a/740", "///a/742" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -66.637, "beta": 158.830, "gamma": 60.770, "delta": 79.343, "epsilon": -145.415, "zeta": -71.311, "epsilon_zeta": -74.103, "bb_type": "BI", "chi": -157.833, "glyco_bond": "anti", "C5prime_xyz": [ -1.486, 8.736, 0.367 ], "P_xyz": [ 1.044, 9.157, -0.127 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.378, "theta": -140.829, "eta_prime": 175.746, "theta_prime": -141.697, "eta_base": -147.713, "theta_base": -106.340, "v0": 2.134, "v1": -25.242, "v2": 37.522, "v3": -37.226, "v4": 22.184, "amplitude": 38.939, "phase_angle": 15.503, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.773, "filter_rmsd": 0.038, "frame": { "rmsd": 0.009, "origin": [ 248.300, 260.243, 298.623 ], "x_axis": [ 0.018, -0.938, -0.347 ], "y_axis": [ 0.934, -0.108, 0.340 ], "z_axis": [ -0.357, -0.330, 0.874 ], "quaternion": [ 0.668, 0.251, -0.004, -0.701 ] } }, { "index": 741, "index_chain": 741, "chain_name": "a", "nt_resnum": 742, "nt_name": "U", "nt_code": "U", "nt_id": "///a/742", "linked_nts": [ "///a/741", "///a/743" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -67.053, "beta": 167.778, "gamma": 58.599, "delta": 80.945, "epsilon": -152.450, "zeta": -84.780, "epsilon_zeta": -67.670, "bb_type": "BI", "chi": -162.796, "glyco_bond": "anti", "C5prime_xyz": [ -1.417, 8.694, 0.700 ], "P_xyz": [ 1.171, 9.070, 0.685 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.023, "theta": -161.266, "eta_prime": -178.322, "theta_prime": -167.161, "eta_base": -123.961, "theta_base": 172.196, "v0": 2.438, "v1": -24.927, "v2": 36.719, "v3": -36.247, "v4": 21.292, "amplitude": 38.006, "phase_angle": 14.950, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.936, "filter_rmsd": 0.108, "frame": { "rmsd": 0.007, "origin": [ 246.834, 257.266, 300.458 ], "x_axis": [ 0.684, -0.689, -0.240 ], "y_axis": [ 0.676, 0.475, 0.563 ], "z_axis": [ -0.274, -0.547, 0.791 ], "quaternion": [ 0.859, 0.323, -0.010, -0.397 ] } }, { "index": 742, "index_chain": 742, "chain_name": "a", "nt_resnum": 743, "nt_name": "A", "nt_code": "A", "nt_id": "///a/743", "linked_nts": [ "///a/742", "///a/744" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -78.727, "beta": 154.156, "gamma": 76.427, "delta": 79.201, "epsilon": -146.385, "zeta": -73.065, "epsilon_zeta": -73.319, "bb_type": "BI", "chi": -162.783, "glyco_bond": "anti", "C5prime_xyz": [ -1.950, 8.778, 0.612 ], "P_xyz": [ 0.408, 9.613, -0.140 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.408, "theta": -146.251, "eta_prime": 171.292, "theta_prime": -149.679, "eta_base": 162.841, "theta_base": -114.456, "v0": -3.215, "v1": -20.357, "v2": 34.757, "v3": -37.549, "v4": 25.730, "amplitude": 37.852, "phase_angle": 23.330, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.210, "filter_rmsd": 0.037, "frame": { "rmsd": 0.013, "origin": [ 243.205, 257.193, 300.996 ], "x_axis": [ 0.755, -0.622, -0.209 ], "y_axis": [ 0.490, 0.323, 0.809 ], "z_axis": [ -0.436, -0.713, 0.549 ], "quaternion": [ 0.810, 0.470, -0.070, -0.343 ] } }, { "index": 743, "index_chain": 743, "chain_name": "a", "nt_resnum": 744, "nt_name": "C", "nt_code": "C", "nt_id": "///a/744", "linked_nts": [ "///a/743", "///a/745" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem", "alpha": -72.221, "beta": 162.819, "gamma": 70.330, "delta": 81.174, "epsilon": -137.286, "zeta": -90.157, "epsilon_zeta": -47.129, "bb_type": "BI", "chi": -150.906, "glyco_bond": "anti", "C5prime_xyz": [ -1.674, 8.886, -0.074 ], "P_xyz": [ 0.766, 9.484, -0.767 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.232, "theta": -151.452, "eta_prime": -173.894, "theta_prime": -150.359, "eta_base": -124.394, "theta_base": -134.219, "v0": -3.132, "v1": -19.418, "v2": 33.132, "v3": -35.873, "v4": 24.681, "amplitude": 36.119, "phase_angle": 23.467, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.515, "filter_rmsd": 0.063, "frame": { "rmsd": 0.012, "origin": [ 242.887, 254.152, 301.294 ], "x_axis": [ 0.883, -0.345, 0.319 ], "y_axis": [ -0.168, 0.401, 0.900 ], "z_axis": [ -0.439, -0.848, 0.296 ], "quaternion": [ 0.803, 0.544, -0.236, -0.055 ] } }, { "index": 744, "index_chain": 744, "chain_name": "a", "nt_resnum": 745, "nt_name": "U", "nt_code": "U", "nt_id": "///a/745", "linked_nts": [ "///a/744", "///a/746" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -50.865, "beta": 164.472, "gamma": 47.217, "delta": 82.214, "epsilon": -133.592, "zeta": -56.078, "epsilon_zeta": -77.515, "bb_type": "BI", "chi": -145.494, "glyco_bond": "anti", "C5prime_xyz": [ -1.773, 8.828, -0.373 ], "P_xyz": [ 0.740, 9.557, -0.495 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.458, "theta": -115.788, "eta_prime": -176.493, "theta_prime": -105.599, "eta_base": -153.853, "theta_base": -62.134, "v0": -4.329, "v1": -18.049, "v2": 32.212, "v3": -35.580, "v4": 25.197, "amplitude": 35.657, "phase_angle": 25.391, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.614, "filter_rmsd": 0.098, "frame": { "rmsd": 0.014, "origin": [ 241.625, 249.852, 302.154 ], "x_axis": [ 0.830, 0.113, 0.546 ], "y_axis": [ -0.525, 0.490, 0.696 ], "z_axis": [ -0.189, -0.865, 0.466 ], "quaternion": [ 0.834, 0.468, -0.220, 0.191 ] } }, { "index": 745, "index_chain": 745, "chain_name": "a", "nt_resnum": 746, "nt_name": "G", "nt_code": "G", "nt_id": "///a/746", "linked_nts": [ "///a/745", "///a/747" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII", "alpha": -74.882, "beta": 178.707, "gamma": 74.442, "delta": 146.555, "epsilon": -103.393, "zeta": 154.056, "epsilon_zeta": 102.551, "bb_type": "BII", "chi": -110.956, "glyco_bond": "anti", "C5prime_xyz": [ -2.173, 8.357, -1.683 ], "P_xyz": [ 0.344, 9.056, -1.855 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -170.557, "theta": 153.436, "eta_prime": -129.282, "theta_prime": 147.962, "eta_base": -84.483, "theta_base": 168.521, "v0": -23.535, "v1": 36.600, "v2": -35.026, "v3": 22.406, "v4": 0.467, "amplitude": 37.160, "phase_angle": 160.490, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.441, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 243.396, 249.962, 307.376 ], "x_axis": [ 0.063, 0.898, 0.436 ], "y_axis": [ -0.962, -0.061, 0.265 ], "z_axis": [ 0.264, -0.436, 0.860 ], "quaternion": [ 0.682, 0.257, -0.063, 0.682 ] } }, { "index": 746, "index_chain": 746, "chain_name": "a", "nt_resnum": 747, "nt_name": "A", "nt_code": "A", "nt_id": "///a/747", "linked_nts": [ "///a/746", "///a/748" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix", "alpha": -70.067, "beta": 172.463, "gamma": 36.793, "delta": 143.167, "epsilon": -104.502, "zeta": 102.470, "epsilon_zeta": 153.028, "bb_type": "--", "chi": -142.006, "glyco_bond": "anti", "C5prime_xyz": [ -2.197, 8.770, -0.167 ], "P_xyz": [ -0.412, 9.936, 1.334 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -144.209, "theta": 126.580, "eta_prime": -149.100, "theta_prime": 81.113, "eta_base": -143.022, "theta_base": 57.461, "v0": -26.386, "v1": 38.802, "v2": -35.659, "v3": 21.370, "v4": 2.878, "amplitude": 38.753, "phase_angle": 156.950, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "4b", "suiteness": 0.775, "filter_rmsd": 0.040, "frame": { "rmsd": 0.012, "origin": [ 244.503, 240.643, 304.990 ], "x_axis": [ 0.455, 0.606, 0.653 ], "y_axis": [ -0.877, 0.432, 0.211 ], "z_axis": [ -0.154, -0.669, 0.728 ], "quaternion": [ 0.808, 0.272, -0.249, 0.459 ] } }, { "index": 747, "index_chain": 747, "chain_name": "a", "nt_resnum": 748, "nt_name": "C", "nt_code": "C", "nt_id": "///a/748", "linked_nts": [ "///a/747", "///a/749" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-stack,canonical,helix", "alpha": 52.174, "beta": -153.902, "gamma": 175.543, "delta": 84.093, "epsilon": -156.300, "zeta": 53.811, "epsilon_zeta": 149.889, "bb_type": "--", "chi": 53.853, "glyco_bond": "syn", "C5prime_xyz": [ -5.460, 4.519, 1.542 ], "P_xyz": [ -5.594, 3.770, 4.054 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 119.589, "theta": -47.162, "eta_prime": 107.108, "theta_prime": -45.764, "eta_base": 114.410, "theta_base": -47.380, "v0": -7.619, "v1": -13.914, "v2": 28.593, "v3": -33.843, "v4": 26.156, "amplitude": 33.497, "phase_angle": 31.395, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "6n", "suiteness": 0.606, "filter_rmsd": 0.069, "frame": { "rmsd": 0.014, "origin": [ 240.583, 244.902, 303.332 ], "x_axis": [ 0.114, 0.875, 0.470 ], "y_axis": [ -0.923, 0.268, -0.277 ], "z_axis": [ -0.369, -0.402, 0.838 ], "quaternion": [ 0.745, 0.042, -0.281, 0.603 ] } }, { "index": 748, "index_chain": 748, "chain_name": "a", "nt_resnum": 749, "nt_name": "A", "nt_code": "A", "nt_id": "///a/749", "linked_nts": [ "///a/748", "///a/750" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -123.466, "beta": -163.168, "gamma": 67.259, "delta": 83.055, "epsilon": -144.599, "zeta": -76.244, "epsilon_zeta": -68.355, "bb_type": "BI", "chi": -176.290, "glyco_bond": "anti", "C5prime_xyz": [ -1.073, 8.309, 1.471 ], "P_xyz": [ 1.479, 8.173, 2.033 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.940, "theta": -142.491, "eta_prime": -152.832, "theta_prime": -140.629, "eta_base": -96.783, "theta_base": -127.790, "v0": 6.792, "v1": -28.136, "v2": 37.699, "v3": -34.737, "v4": 17.635, "amplitude": 38.123, "phase_angle": 8.549, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.017, "origin": [ 236.892, 233.572, 297.803 ], "x_axis": [ -0.994, 0.106, 0.020 ], "y_axis": [ 0.107, 0.989, 0.097 ], "z_axis": [ -0.009, 0.099, -0.995 ], "quaternion": [ -0.007, 0.053, 0.997, 0.049 ] } }, { "index": 749, "index_chain": 749, "chain_name": "a", "nt_resnum": 750, "nt_name": "C", "nt_code": "C", "nt_id": "///a/750", "linked_nts": [ "///a/749", "///a/751" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -65.354, "beta": 165.849, "gamma": 70.132, "delta": 78.314, "epsilon": -130.180, "zeta": -68.924, "epsilon_zeta": -61.256, "bb_type": "BI", "chi": -164.531, "glyco_bond": "anti", "C5prime_xyz": [ -1.378, 8.795, 0.745 ], "P_xyz": [ 1.151, 9.319, 0.361 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.741, "theta": -132.039, "eta_prime": -168.636, "theta_prime": -132.034, "eta_base": -142.276, "theta_base": -87.775, "v0": 0.487, "v1": -24.686, "v2": 38.213, "v3": -38.724, "v4": 24.132, "amplitude": 40.127, "phase_angle": 17.767, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.533, "filter_rmsd": 0.071, "frame": { "rmsd": 0.017, "origin": [ 236.393, 231.373, 294.707 ], "x_axis": [ -0.841, 0.525, -0.134 ], "y_axis": [ 0.535, 0.843, -0.059 ], "z_axis": [ 0.082, -0.121, -0.989 ], "quaternion": [ 0.056, 0.277, 0.958, -0.047 ] } }, { "index": 750, "index_chain": 750, "chain_name": "a", "nt_resnum": 751, "nt_name": "U", "nt_code": "U", "nt_id": "///a/751", "linked_nts": [ "///a/750", "///a/752" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -88.464, "beta": 157.925, "gamma": 84.818, "delta": 79.618, "epsilon": -137.707, "zeta": -67.485, "epsilon_zeta": -70.222, "bb_type": "BI", "chi": -148.631, "glyco_bond": "anti", "C5prime_xyz": [ -1.646, 8.777, -0.157 ], "P_xyz": [ 0.539, 9.226, -1.496 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.279, "theta": -135.204, "eta_prime": -178.121, "theta_prime": -136.666, "eta_base": -115.731, "theta_base": -89.546, "v0": -0.078, "v1": -23.505, "v2": 36.927, "v3": -37.835, "v4": 23.878, "amplitude": 38.967, "phase_angle": 18.617, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.010, "filter_rmsd": 0.104, "frame": { "rmsd": 0.017, "origin": [ 234.399, 232.314, 292.336 ], "x_axis": [ -0.341, 0.935, -0.099 ], "y_axis": [ 0.882, 0.282, -0.377 ], "z_axis": [ -0.324, -0.216, -0.921 ], "quaternion": [ -0.070, 0.570, 0.798, -0.186 ] } }, { "index": 751, "index_chain": 751, "chain_name": "a", "nt_resnum": 752, "nt_name": "G", "nt_code": "G", "nt_id": "///a/752", "linked_nts": [ "///a/751", "///a/753" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -80.609, "beta": 162.442, "gamma": 81.521, "delta": 84.115, "epsilon": -171.209, "zeta": -127.199, "epsilon_zeta": -44.010, "bb_type": "BI", "chi": -146.234, "glyco_bond": "anti", "C5prime_xyz": [ -1.182, 8.709, -0.273 ], "P_xyz": [ 1.153, 8.793, -1.439 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.419, "theta": 146.525, "eta_prime": -167.040, "theta_prime": 143.964, "eta_base": -100.457, "theta_base": 149.741, "v0": 3.402, "v1": -24.733, "v2": 35.246, "v3": -34.261, "v4": 19.603, "amplitude": 36.224, "phase_angle": 13.343, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.078, "filter_rmsd": 0.022, "frame": { "rmsd": 0.022, "origin": [ 233.535, 235.391, 289.114 ], "x_axis": [ 0.478, 0.842, -0.249 ], "y_axis": [ 0.700, -0.537, -0.472 ], "z_axis": [ -0.531, 0.051, -0.846 ], "quaternion": [ -0.155, 0.846, 0.456, -0.231 ] } }, { "index": 752, "index_chain": 752, "chain_name": "a", "nt_resnum": 753, "nt_name": "A", "nt_code": "A", "nt_id": "///a/753", "linked_nts": [ "///a/752", "///a/754" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -45.807, "beta": 178.038, "gamma": 49.761, "delta": 75.952, "epsilon": -135.313, "zeta": -15.274, "epsilon_zeta": -120.039, "bb_type": "--", "chi": -149.329, "glyco_bond": "anti", "C5prime_xyz": [ -1.608, 8.839, -0.160 ], "P_xyz": [ 0.787, 9.781, -0.247 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -161.548, "theta": -99.941, "eta_prime": -178.020, "theta_prime": -102.655, "eta_base": 164.425, "theta_base": -68.157, "v0": -1.595, "v1": -23.235, "v2": 37.832, "v3": -39.801, "v4": 26.140, "amplitude": 40.477, "phase_angle": 20.831, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "7a", "suiteness": 0.441, "filter_rmsd": 0.040, "frame": { "rmsd": 0.012, "origin": [ 226.721, 225.988, 285.658 ], "x_axis": [ -0.242, 0.970, 0.005 ], "y_axis": [ 0.917, 0.231, -0.327 ], "z_axis": [ -0.318, -0.074, -0.945 ], "quaternion": [ -0.104, 0.607, 0.777, -0.129 ] } }, { "index": 753, "index_chain": 753, "chain_name": "a", "nt_resnum": 754, "nt_name": "G", "nt_code": "G", "nt_id": "///a/754", "linked_nts": [ "///a/753", "///a/755" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -139.612, "beta": 124.481, "gamma": 148.910, "delta": 77.866, "epsilon": -128.368, "zeta": -41.604, "epsilon_zeta": -86.764, "bb_type": "--", "chi": -179.523, "glyco_bond": "anti", "C5prime_xyz": [ -1.114, 8.338, 1.600 ], "P_xyz": [ -0.474, 10.468, 0.218 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.437, "theta": -112.562, "eta_prime": -168.202, "theta_prime": -111.736, "eta_base": -105.843, "theta_base": -58.283, "v0": 7.319, "v1": -30.748, "v2": 41.377, "v3": -38.148, "v4": 19.414, "amplitude": 41.859, "phase_angle": 8.704, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 226.245, 232.066, 283.153 ], "x_axis": [ 0.625, 0.780, -0.030 ], "y_axis": [ 0.723, -0.593, -0.354 ], "z_axis": [ -0.294, 0.200, -0.935 ], "quaternion": [ -0.156, 0.888, 0.423, -0.091 ] } }, { "index": 754, "index_chain": 754, "chain_name": "a", "nt_resnum": 755, "nt_name": "G", "nt_code": "G", "nt_id": "///a/755", "linked_nts": [ "///a/754", "///a/756" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 172.102, "beta": -164.616, "gamma": 150.613, "delta": 81.821, "epsilon": -156.735, "zeta": -83.464, "epsilon_zeta": -73.271, "bb_type": "BI", "chi": -173.255, "glyco_bond": "anti", "C5prime_xyz": [ -1.017, 8.506, 1.295 ], "P_xyz": [ 1.071, 9.605, 0.161 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 139.599, "theta": -136.522, "eta_prime": -174.302, "theta_prime": -141.725, "eta_base": -83.132, "theta_base": -100.022, "v0": 4.432, "v1": -25.772, "v2": 36.226, "v3": -34.585, "v4": 19.067, "amplitude": 37.018, "phase_angle": 11.877, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.010, "filter_rmsd": 0.024, "frame": { "rmsd": 0.024, "origin": [ 233.168, 234.630, 280.153 ], "x_axis": [ 0.758, -0.562, -0.329 ], "y_axis": [ -0.650, -0.688, -0.322 ], "z_axis": [ -0.046, 0.458, -0.888 ], "quaternion": [ -0.214, 0.913, -0.332, -0.103 ] } }, { "index": 755, "index_chain": 755, "chain_name": "a", "nt_resnum": 756, "nt_name": "U", "nt_code": "U", "nt_id": "///a/756", "linked_nts": [ "///a/755", "///a/757" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 178.123, "beta": -137.691, "gamma": 144.499, "delta": 82.382, "epsilon": -116.079, "zeta": -61.047, "epsilon_zeta": -55.032, "bb_type": "--", "chi": -157.887, "glyco_bond": "anti", "C5prime_xyz": [ -1.421, 8.734, 0.404 ], "P_xyz": [ 0.722, 9.037, -1.060 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.396, "theta": -125.987, "eta_prime": -175.693, "theta_prime": -141.019, "eta_base": -116.636, "theta_base": -134.592, "v0": 0.865, "v1": -22.525, "v2": 34.368, "v3": -34.815, "v4": 21.407, "amplitude": 35.985, "phase_angle": 17.244, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.105, "frame": { "rmsd": 0.011, "origin": [ 235.071, 234.998, 277.701 ], "x_axis": [ 0.168, -0.809, -0.563 ], "y_axis": [ -0.941, 0.039, -0.336 ], "z_axis": [ 0.293, 0.586, -0.755 ], "quaternion": [ -0.336, 0.686, -0.638, -0.098 ] } }, { "index": 756, "index_chain": 756, "chain_name": "a", "nt_resnum": 757, "nt_name": "G", "nt_code": "G", "nt_id": "///a/757", "linked_nts": [ "///a/756", "///a/758" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem", "alpha": -116.363, "beta": 118.053, "gamma": 134.762, "delta": 80.619, "epsilon": -112.727, "zeta": -90.813, "epsilon_zeta": -21.914, "bb_type": "--", "chi": -176.287, "glyco_bond": "anti", "C5prime_xyz": [ -1.564, 8.570, 1.439 ], "P_xyz": [ -0.550, 10.247, -0.293 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.387, "theta": -172.453, "eta_prime": 178.589, "theta_prime": -166.966, "eta_base": -157.186, "theta_base": -127.171, "v0": 0.067, "v1": -23.188, "v2": 36.054, "v3": -37.026, "v4": 23.289, "amplitude": 38.011, "phase_angle": 18.469, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 237.883, 236.436, 274.363 ], "x_axis": [ -0.213, -0.889, -0.406 ], "y_axis": [ -0.945, 0.293, -0.146 ], "z_axis": [ 0.249, 0.352, -0.902 ], "quaternion": [ 0.211, -0.591, 0.776, 0.066 ] } }, { "index": 757, "index_chain": 757, "chain_name": "a", "nt_resnum": 758, "nt_name": "C", "nt_code": "C", "nt_id": "///a/758", "linked_nts": [ "///a/757", "///a/759" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix-end,stem-end,multiplet", "alpha": -77.484, "beta": 144.521, "gamma": 74.792, "delta": 81.235, "epsilon": -143.188, "zeta": -10.886, "epsilon_zeta": -132.302, "bb_type": "--", "chi": -143.853, "glyco_bond": "anti", "C5prime_xyz": [ -1.546, 8.782, -0.466 ], "P_xyz": [ 0.629, 8.818, -1.896 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.275, "theta": -95.280, "eta_prime": 173.073, "theta_prime": -109.871, "eta_base": -135.923, "theta_base": -82.505, "v0": 0.092, "v1": -23.060, "v2": 35.935, "v3": -36.862, "v4": 23.177, "amplitude": 37.881, "phase_angle": 18.445, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.481, "filter_rmsd": 0.070, "frame": { "rmsd": 0.019, "origin": [ 238.624, 236.175, 272.441 ], "x_axis": [ -0.653, -0.576, -0.491 ], "y_axis": [ -0.455, 0.818, -0.353 ], "z_axis": [ 0.605, -0.007, -0.796 ], "quaternion": [ 0.303, -0.285, 0.904, -0.100 ] } }, { "index": 758, "index_chain": 758, "chain_name": "a", "nt_resnum": 759, "nt_name": "G", "nt_code": "G", "nt_id": "///a/759", "linked_nts": [ "///a/758", "///a/760" ], "nt_type": "RNA", "dbn": ".", "summary": "syn", "alpha": -141.243, "beta": 115.335, "gamma": -174.628, "delta": 77.114, "epsilon": -103.293, "zeta": -122.514, "epsilon_zeta": 19.221, "bb_type": "--", "chi": -26.579, "glyco_bond": "syn", "C5prime_xyz": [ -3.753, 4.257, -2.948 ], "P_xyz": [ -6.033, 3.808, -4.049 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -166.573, "theta": 143.921, "eta_prime": -148.095, "theta_prime": 164.621, "eta_base": -89.252, "theta_base": 172.964, "v0": 16.412, "v1": -38.268, "v2": 44.990, "v3": -36.589, "v4": 12.611, "amplitude": 45.026, "phase_angle": 357.734, "puckering": "C2'-exo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.040, "origin": [ 235.157, 238.037, 263.375 ], "x_axis": [ 0.246, -0.587, -0.771 ], "y_axis": [ 0.902, -0.152, 0.404 ], "z_axis": [ -0.354, -0.795, 0.493 ], "quaternion": [ 0.630, 0.476, 0.165, -0.591 ] } }, { "index": 759, "index_chain": 759, "chain_name": "a", "nt_resnum": 760, "nt_name": "A", "nt_code": "A", "nt_id": "///a/760", "linked_nts": [ "///a/759", "///a/761" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -177.766, "beta": 151.439, "gamma": 165.810, "delta": 83.852, "epsilon": -119.280, "zeta": -50.437, "epsilon_zeta": -68.843, "bb_type": "--", "chi": -173.957, "glyco_bond": "anti", "C5prime_xyz": [ -1.364, 8.440, 1.341 ], "P_xyz": [ -0.373, 10.598, 0.326 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.331, "theta": -140.481, "eta_prime": 154.417, "theta_prime": -130.549, "eta_base": 114.823, "theta_base": -72.287, "v0": 1.646, "v1": -23.349, "v2": 34.885, "v3": -34.971, "v4": 21.017, "amplitude": 36.309, "phase_angle": 16.101, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.047, "frame": { "rmsd": 0.022, "origin": [ 248.176, 234.474, 259.422 ], "x_axis": [ -0.768, -0.633, -0.099 ], "y_axis": [ -0.584, 0.628, 0.515 ], "z_axis": [ -0.263, 0.453, -0.852 ], "quaternion": [ -0.045, -0.338, 0.901, 0.268 ] } }, { "index": 760, "index_chain": 760, "chain_name": "a", "nt_resnum": 761, "nt_name": "A", "nt_code": "A", "nt_id": "///a/761", "linked_nts": [ "///a/760", "///a/762" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end,multiplet", "alpha": -81.314, "beta": 163.841, "gamma": 67.895, "delta": 77.424, "epsilon": -147.972, "zeta": -70.738, "epsilon_zeta": -77.234, "bb_type": "BI", "chi": -162.364, "glyco_bond": "anti", "C5prime_xyz": [ -1.904, 8.779, 0.587 ], "P_xyz": [ 0.525, 9.636, 0.280 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 146.894, "theta": -145.973, "eta_prime": -177.936, "theta_prime": -145.681, "eta_base": -98.773, "theta_base": -99.566, "v0": -3.210, "v1": -21.669, "v2": 36.839, "v3": -39.664, "v4": 27.009, "amplitude": 40.031, "phase_angle": 23.038, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.279, "filter_rmsd": 0.041, "frame": { "rmsd": 0.016, "origin": [ 242.995, 233.742, 257.935 ], "x_axis": [ -0.797, 0.164, 0.582 ], "y_axis": [ 0.304, 0.941, 0.151 ], "z_axis": [ -0.522, 0.297, -0.799 ], "quaternion": [ -0.293, 0.125, 0.940, 0.119 ] } }, { "index": 761, "index_chain": 761, "chain_name": "a", "nt_resnum": 762, "nt_name": "A", "nt_code": "A", "nt_id": "///a/762", "linked_nts": [ "///a/761", "///a/763" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -72.652, "beta": 165.487, "gamma": 65.553, "delta": 79.543, "epsilon": -134.048, "zeta": -53.487, "epsilon_zeta": -80.561, "bb_type": "BI", "chi": -161.267, "glyco_bond": "anti", "C5prime_xyz": [ -1.066, 8.600, 0.590 ], "P_xyz": [ 1.491, 8.772, 0.099 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.785, "theta": -117.004, "eta_prime": -176.788, "theta_prime": -117.572, "eta_base": -113.709, "theta_base": -86.058, "v0": 5.770, "v1": -28.670, "v2": 39.698, "v3": -37.290, "v4": 19.920, "amplitude": 40.382, "phase_angle": 10.557, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.705, "filter_rmsd": 0.046, "frame": { "rmsd": 0.018, "origin": [ 239.319, 235.322, 256.520 ], "x_axis": [ -0.326, 0.821, 0.470 ], "y_axis": [ 0.751, 0.526, -0.399 ], "z_axis": [ -0.575, 0.222, -0.787 ], "quaternion": [ -0.321, 0.484, 0.812, -0.054 ] } }, { "index": 762, "index_chain": 762, "chain_name": "a", "nt_resnum": 763, "nt_name": "G", "nt_code": "G", "nt_id": "///a/763", "linked_nts": [ "///a/762", "///a/764" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -84.219, "beta": 170.733, "gamma": 83.018, "delta": 75.939, "epsilon": -146.040, "zeta": -68.711, "epsilon_zeta": -77.329, "bb_type": "BI", "chi": -171.315, "glyco_bond": "anti", "C5prime_xyz": [ -1.710, 8.781, 1.102 ], "P_xyz": [ 0.704, 9.733, 0.914 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.268, "theta": -146.677, "eta_prime": -166.799, "theta_prime": -146.549, "eta_base": -109.423, "theta_base": -117.960, "v0": -3.715, "v1": -21.195, "v2": 36.650, "v3": -39.757, "v4": 27.471, "amplitude": 40.056, "phase_angle": 23.799, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.030, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 236.025, 239.346, 256.140 ], "x_axis": [ 0.459, 0.856, 0.238 ], "y_axis": [ 0.720, -0.202, -0.664 ], "z_axis": [ -0.521, 0.476, -0.709 ], "quaternion": [ -0.370, 0.770, 0.512, -0.092 ] } }, { "index": 763, "index_chain": 763, "chain_name": "a", "nt_resnum": 764, "nt_name": "C", "nt_code": "C", "nt_id": "///a/764", "linked_nts": [ "///a/763", "///a/765" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -69.547, "beta": -179.975, "gamma": 52.483, "delta": 76.917, "epsilon": -150.158, "zeta": -75.173, "epsilon_zeta": -74.984, "bb_type": "BI", "chi": -159.196, "glyco_bond": "anti", "C5prime_xyz": [ -1.587, 8.865, 0.422 ], "P_xyz": [ 0.889, 9.629, 0.719 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.215, "theta": -154.247, "eta_prime": 177.561, "theta_prime": -150.999, "eta_base": -139.365, "theta_base": -132.651, "v0": -1.869, "v1": -22.776, "v2": 37.487, "v3": -39.493, "v4": 26.022, "amplitude": 40.191, "phase_angle": 21.139, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.873, "filter_rmsd": 0.064, "frame": { "rmsd": 0.014, "origin": [ 233.746, 242.491, 255.186 ], "x_axis": [ 0.847, 0.519, -0.115 ], "y_axis": [ 0.288, -0.631, -0.720 ], "z_axis": [ -0.446, 0.577, -0.684 ], "quaternion": [ -0.365, 0.889, 0.227, -0.158 ] } }, { "index": 764, "index_chain": 764, "chain_name": "a", "nt_resnum": 765, "nt_name": "G", "nt_code": "G", "nt_id": "///a/765", "linked_nts": [ "///a/764", "///a/766" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -66.144, "beta": -174.253, "gamma": 49.427, "delta": 77.802, "epsilon": -147.020, "zeta": -75.623, "epsilon_zeta": -71.397, "bb_type": "BI", "chi": -153.139, "glyco_bond": "anti", "C5prime_xyz": [ -1.438, 8.825, 0.069 ], "P_xyz": [ 1.055, 9.562, 0.293 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.152, "theta": -153.057, "eta_prime": 175.956, "theta_prime": -150.915, "eta_base": -159.430, "theta_base": -141.825, "v0": 0.920, "v1": -24.782, "v2": 37.875, "v3": -38.371, "v4": 23.634, "amplitude": 39.669, "phase_angle": 17.299, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.871, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 231.961, 246.165, 253.722 ], "x_axis": [ 0.974, 0.013, -0.224 ], "y_axis": [ -0.134, -0.766, -0.628 ], "z_axis": [ -0.180, 0.642, -0.745 ], "quaternion": [ -0.340, 0.934, -0.032, -0.108 ] } }, { "index": 765, "index_chain": 765, "chain_name": "a", "nt_resnum": 766, "nt_name": "U", "nt_code": "U", "nt_id": "///a/766", "linked_nts": [ "///a/765", "///a/767" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -80.939, "beta": 175.989, "gamma": 61.412, "delta": 75.233, "epsilon": -145.873, "zeta": -66.878, "epsilon_zeta": -78.995, "bb_type": "BI", "chi": -154.036, "glyco_bond": "anti", "C5prime_xyz": [ -1.787, 8.826, 0.134 ], "P_xyz": [ 0.647, 9.670, -0.246 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.571, "theta": -144.233, "eta_prime": 167.222, "theta_prime": -144.096, "eta_base": -174.555, "theta_base": -116.898, "v0": -0.542, "v1": -24.638, "v2": 39.089, "v3": -40.321, "v4": 25.726, "amplitude": 41.397, "phase_angle": 19.224, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.683, "filter_rmsd": 0.106, "frame": { "rmsd": 0.010, "origin": [ 231.706, 249.601, 252.262 ], "x_axis": [ 0.877, -0.460, -0.140 ], "y_axis": [ -0.437, -0.642, -0.630 ], "z_axis": [ 0.201, 0.614, -0.764 ], "quaternion": [ -0.343, 0.906, -0.248, 0.017 ] } }, { "index": 766, "index_chain": 766, "chain_name": "a", "nt_resnum": 767, "nt_name": "G", "nt_code": "G", "nt_id": "///a/767", "linked_nts": [ "///a/766", "///a/768" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -73.253, "beta": 164.010, "gamma": 76.035, "delta": 72.927, "epsilon": -142.126, "zeta": -45.983, "epsilon_zeta": -96.144, "bb_type": "BI", "chi": -171.971, "glyco_bond": "anti", "C5prime_xyz": [ -1.819, 8.771, 1.144 ], "P_xyz": [ 0.569, 9.776, 0.847 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.358, "theta": -132.739, "eta_prime": -174.976, "theta_prime": -144.252, "eta_base": -130.981, "theta_base": -125.958, "v0": -1.807, "v1": -23.910, "v2": 39.213, "v3": -41.267, "v4": 27.093, "amplitude": 41.994, "phase_angle": 20.971, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.238, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 235.078, 251.412, 249.874 ], "x_axis": [ 0.438, -0.859, -0.264 ], "y_axis": [ -0.843, -0.292, -0.452 ], "z_axis": [ 0.311, 0.420, -0.852 ], "quaternion": [ -0.271, 0.803, -0.530, 0.015 ] } }, { "index": 767, "index_chain": 767, "chain_name": "a", "nt_resnum": 768, "nt_name": "G", "nt_code": "G", "nt_id": "///a/768", "linked_nts": [ "///a/767", "///a/769" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end,stem-end", "alpha": -137.371, "beta": 128.376, "gamma": 148.390, "delta": 80.674, "epsilon": -110.785, "zeta": -74.244, "epsilon_zeta": -36.541, "bb_type": "--", "chi": 179.714, "glyco_bond": "anti", "C5prime_xyz": [ -1.104, 8.311, 1.699 ], "P_xyz": [ -0.139, 10.393, 0.457 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.090, "theta": -154.617, "eta_prime": -179.997, "theta_prime": -144.006, "eta_base": -144.350, "theta_base": -82.041, "v0": 6.682, "v1": -28.512, "v2": 38.367, "v3": -35.537, "v4": 18.219, "amplitude": 38.838, "phase_angle": 8.933, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.010, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 238.773, 251.943, 248.363 ], "x_axis": [ 0.040, -0.895, -0.444 ], "y_axis": [ -0.894, 0.167, -0.416 ], "z_axis": [ 0.447, 0.413, -0.794 ], "quaternion": [ 0.321, -0.645, 0.693, -0.001 ] } }, { "index": 768, "index_chain": 768, "chain_name": "a", "nt_resnum": 769, "nt_name": "G", "nt_code": "G", "nt_id": "///a/769", "linked_nts": [ "///a/768", "///a/770" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -62.145, "beta": 158.090, "gamma": 56.946, "delta": 83.786, "epsilon": -145.700, "zeta": -72.823, "epsilon_zeta": -72.876, "bb_type": "BI", "chi": -165.975, "glyco_bond": "anti", "C5prime_xyz": [ -1.346, 8.597, 0.881 ], "P_xyz": [ 1.260, 8.759, 0.791 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.726, "theta": -138.736, "eta_prime": -177.513, "theta_prime": -134.915, "eta_base": -97.320, "theta_base": -125.778, "v0": 3.461, "v1": -24.508, "v2": 35.066, "v3": -34.019, "v4": 19.338, "amplitude": 36.023, "phase_angle": 13.237, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.304, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 238.978, 249.721, 244.307 ], "x_axis": [ -0.827, -0.355, -0.435 ], "y_axis": [ -0.391, 0.921, -0.009 ], "z_axis": [ 0.404, 0.163, -0.900 ], "quaternion": [ 0.220, -0.195, 0.955, 0.040 ] } }, { "index": 769, "index_chain": 769, "chain_name": "a", "nt_resnum": 770, "nt_name": "G", "nt_code": "G", "nt_id": "///a/770", "linked_nts": [ "///a/769", "///a/771" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -66.244, "beta": -174.023, "gamma": 61.152, "delta": 141.984, "epsilon": -148.041, "zeta": 153.660, "epsilon_zeta": 58.299, "bb_type": "--", "chi": -141.544, "glyco_bond": "anti", "C5prime_xyz": [ -1.941, 8.796, -0.163 ], "P_xyz": [ 0.232, 9.589, 1.051 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.304, "theta": 121.422, "eta_prime": -154.674, "theta_prime": 104.220, "eta_base": -135.121, "theta_base": 102.497, "v0": -24.435, "v1": 36.089, "v2": -33.346, "v3": 20.138, "v4": 2.468, "amplitude": 36.136, "phase_angle": 157.336, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.923, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 240.443, 248.261, 241.088 ], "x_axis": [ -0.986, 0.036, 0.160 ], "y_axis": [ 0.060, 0.987, 0.147 ], "z_axis": [ -0.153, 0.155, -0.976 ], "quaternion": [ -0.079, 0.024, 0.994, 0.076 ] } }, { "index": 770, "index_chain": 770, "chain_name": "a", "nt_resnum": 771, "nt_name": "A", "nt_code": "A", "nt_id": "///a/771", "linked_nts": [ "///a/770", "///a/772" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -135.038, "beta": 160.774, "gamma": 59.071, "delta": 78.961, "epsilon": -127.930, "zeta": -77.541, "epsilon_zeta": -50.389, "bb_type": "BI", "chi": -165.337, "glyco_bond": "anti", "C5prime_xyz": [ -1.532, 8.665, 0.786 ], "P_xyz": [ 1.011, 9.200, 0.602 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 140.116, "theta": -136.784, "eta_prime": 128.498, "theta_prime": -133.799, "eta_base": 121.178, "theta_base": -85.597, "v0": 1.091, "v1": -24.838, "v2": 37.749, "v3": -38.161, "v4": 23.412, "amplitude": 39.486, "phase_angle": 17.056, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "4g", "suiteness": 0.088, "filter_rmsd": 0.039, "frame": { "rmsd": 0.017, "origin": [ 249.962, 252.521, 247.398 ], "x_axis": [ -0.832, -0.553, 0.038 ], "y_axis": [ -0.315, 0.415, -0.853 ], "z_axis": [ 0.457, -0.722, -0.520 ], "quaternion": [ 0.126, -0.261, 0.832, -0.473 ] } }, { "index": 771, "index_chain": 771, "chain_name": "a", "nt_resnum": 772, "nt_name": "G", "nt_code": "G", "nt_id": "///a/772", "linked_nts": [ "///a/771", "///a/773" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -75.183, "beta": 151.361, "gamma": 78.237, "delta": 84.227, "epsilon": -141.986, "zeta": -65.191, "epsilon_zeta": -76.795, "bb_type": "BI", "chi": -157.551, "glyco_bond": "anti", "C5prime_xyz": [ -1.225, 8.703, 0.372 ], "P_xyz": [ 1.135, 8.849, -0.734 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.018, "theta": -129.898, "eta_prime": -172.623, "theta_prime": -134.647, "eta_base": -106.318, "theta_base": -96.416, "v0": 3.328, "v1": -24.778, "v2": 35.509, "v3": -34.524, "v4": 19.731, "amplitude": 36.511, "phase_angle": 13.456, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.139, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 248.743, 249.103, 245.729 ], "x_axis": [ -0.800, -0.095, -0.593 ], "y_axis": [ 0.490, 0.466, -0.736 ], "z_axis": [ 0.347, -0.879, -0.326 ], "quaternion": [ 0.292, 0.123, 0.805, -0.502 ] } }, { "index": 772, "index_chain": 772, "chain_name": "a", "nt_resnum": 773, "nt_name": "C", "nt_code": "C", "nt_id": "///a/773", "linked_nts": [ "///a/772", "///a/774" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -72.363, "beta": 167.576, "gamma": 62.121, "delta": 81.611, "epsilon": -135.274, "zeta": -69.998, "epsilon_zeta": -65.276, "bb_type": "BI", "chi": -149.277, "glyco_bond": "anti", "C5prime_xyz": [ -1.615, 8.809, -0.107 ], "P_xyz": [ 0.900, 9.298, -0.581 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.755, "theta": -130.378, "eta_prime": -174.574, "theta_prime": -127.518, "eta_base": -115.744, "theta_base": -77.567, "v0": 0.328, "v1": -22.546, "v2": 34.941, "v3": -35.660, "v4": 22.330, "amplitude": 36.757, "phase_angle": 18.084, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.820, "filter_rmsd": 0.066, "frame": { "rmsd": 0.014, "origin": [ 247.590, 246.734, 243.564 ], "x_axis": [ -0.331, 0.339, -0.880 ], "y_axis": [ 0.943, 0.160, -0.293 ], "z_axis": [ 0.041, -0.927, -0.373 ], "quaternion": [ 0.337, 0.469, 0.683, -0.447 ] } }, { "index": 773, "index_chain": 773, "chain_name": "a", "nt_resnum": 774, "nt_name": "A", "nt_code": "A", "nt_id": "///a/774", "linked_nts": [ "///a/773", "///a/775" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -63.108, "beta": 166.318, "gamma": 59.217, "delta": 82.708, "epsilon": -172.758, "zeta": -93.985, "epsilon_zeta": -78.773, "bb_type": "BI", "chi": -136.753, "glyco_bond": "anti", "C5prime_xyz": [ -1.351, 8.609, -0.833 ], "P_xyz": [ 1.143, 8.727, -1.597 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.582, "theta": 174.064, "eta_prime": -170.628, "theta_prime": 162.052, "eta_base": -103.376, "theta_base": 157.561, "v0": 2.934, "v1": -24.532, "v2": 35.591, "v3": -34.847, "v4": 20.179, "amplitude": 36.700, "phase_angle": 14.122, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.858, "filter_rmsd": 0.042, "frame": { "rmsd": 0.018, "origin": [ 248.088, 245.875, 239.131 ], "x_axis": [ 0.514, 0.480, -0.711 ], "y_axis": [ 0.836, -0.467, 0.288 ], "z_axis": [ -0.194, -0.743, -0.641 ], "quaternion": [ 0.318, 0.810, 0.406, -0.280 ] } }, { "index": 774, "index_chain": 774, "chain_name": "a", "nt_resnum": 775, "nt_name": "A", "nt_code": "A", "nt_id": "///a/775", "linked_nts": [ "///a/774", "///a/776" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -145.176, "beta": 142.950, "gamma": 146.638, "delta": 82.248, "epsilon": -114.780, "zeta": -47.813, "epsilon_zeta": -66.967, "bb_type": "--", "chi": 171.831, "glyco_bond": "anti", "C5prime_xyz": [ -1.501, 8.224, 2.100 ], "P_xyz": [ 0.017, 10.232, 1.430 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -179.854, "theta": -127.030, "eta_prime": 162.177, "theta_prime": -117.493, "eta_base": 152.886, "theta_base": -67.806, "v0": -0.098, "v1": -21.525, "v2": 33.838, "v3": -34.736, "v4": 22.004, "amplitude": 35.730, "phase_angle": 18.731, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.047, "frame": { "rmsd": 0.018, "origin": [ 242.760, 236.952, 241.206 ], "x_axis": [ -0.122, 0.869, -0.480 ], "y_axis": [ 0.979, 0.184, 0.085 ], "z_axis": [ 0.162, -0.460, -0.873 ], "quaternion": [ 0.217, 0.626, 0.738, -0.127 ] } }, { "index": 775, "index_chain": 775, "chain_name": "a", "nt_resnum": 776, "nt_name": "A", "nt_code": "A", "nt_id": "///a/776", "linked_nts": [ "///a/775", "///a/777" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -72.341, "beta": 172.249, "gamma": 56.404, "delta": 77.481, "epsilon": -116.494, "zeta": -63.335, "epsilon_zeta": -53.159, "bb_type": "--", "chi": -175.314, "glyco_bond": "anti", "C5prime_xyz": [ -1.736, 8.613, 1.375 ], "P_xyz": [ 0.720, 9.174, 2.070 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.662, "theta": -114.166, "eta_prime": -170.461, "theta_prime": -106.631, "eta_base": -97.234, "theta_base": -52.375, "v0": -1.953, "v1": -22.298, "v2": 36.831, "v3": -38.915, "v4": 25.759, "amplitude": 39.547, "phase_angle": 21.359, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.304, "filter_rmsd": 0.042, "frame": { "rmsd": 0.012, "origin": [ 245.615, 239.516, 235.160 ], "x_axis": [ 0.826, 0.546, 0.144 ], "y_axis": [ 0.342, -0.686, 0.642 ], "z_axis": [ 0.449, -0.481, -0.753 ], "quaternion": [ 0.311, 0.904, 0.246, 0.164 ] } }, { "index": 776, "index_chain": 776, "chain_name": "a", "nt_resnum": 777, "nt_name": "C", "nt_code": "C", "nt_id": "///a/777", "linked_nts": [ "///a/776", "///a/778" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -63.796, "beta": 155.131, "gamma": 72.068, "delta": 77.317, "epsilon": -131.929, "zeta": -91.875, "epsilon_zeta": -40.054, "bb_type": "BI", "chi": -146.832, "glyco_bond": "anti", "C5prime_xyz": [ -1.834, 8.897, -0.290 ], "P_xyz": [ 0.440, 9.454, -1.420 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.573, "theta": -149.100, "eta_prime": -164.434, "theta_prime": -149.101, "eta_base": -90.418, "theta_base": -128.082, "v0": -3.685, "v1": -20.482, "v2": 35.554, "v3": -38.709, "v4": 26.745, "amplitude": 38.911, "phase_angle": 23.973, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.229, "filter_rmsd": 0.062, "frame": { "rmsd": 0.009, "origin": [ 251.144, 239.486, 235.052 ], "x_axis": [ 0.799, -0.358, 0.484 ], "y_axis": [ -0.367, -0.927, -0.080 ], "z_axis": [ 0.477, -0.114, -0.872 ], "quaternion": [ 0.009, 0.948, -0.191, 0.253 ] } }, { "index": 777, "index_chain": 777, "chain_name": "a", "nt_resnum": 778, "nt_name": "A", "nt_code": "A", "nt_id": "///a/778", "linked_nts": [ "///a/777", "///a/779" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -40.505, "beta": 162.609, "gamma": 36.759, "delta": 77.573, "epsilon": -145.933, "zeta": -74.601, "epsilon_zeta": -71.332, "bb_type": "BI", "chi": -161.206, "glyco_bond": "anti", "C5prime_xyz": [ -1.741, 8.772, 0.534 ], "P_xyz": [ 0.715, 9.513, 0.999 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.440, "theta": -148.817, "eta_prime": 176.920, "theta_prime": -148.138, "eta_base": -151.567, "theta_base": -124.293, "v0": -2.023, "v1": -21.831, "v2": 36.089, "v3": -38.250, "v4": 25.403, "amplitude": 38.799, "phase_angle": 21.542, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.237, "filter_rmsd": 0.040, "frame": { "rmsd": 0.014, "origin": [ 255.113, 238.269, 231.643 ], "x_axis": [ 0.177, -0.537, 0.825 ], "y_axis": [ -0.817, -0.548, -0.181 ], "z_axis": [ 0.549, -0.642, -0.535 ], "quaternion": [ 0.153, 0.752, -0.450, 0.457 ] } }, { "index": 778, "index_chain": 778, "chain_name": "a", "nt_resnum": 779, "nt_name": "G", "nt_code": "G", "nt_id": "///a/779", "linked_nts": [ "///a/778", "///a/780" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -68.521, "beta": 165.888, "gamma": 60.205, "delta": 76.865, "epsilon": -154.287, "zeta": -71.950, "epsilon_zeta": -82.336, "bb_type": "BI", "chi": -167.563, "glyco_bond": "anti", "C5prime_xyz": [ -1.769, 8.806, 0.886 ], "P_xyz": [ 0.702, 9.641, 0.907 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.976, "theta": -152.448, "eta_prime": 175.089, "theta_prime": -152.863, "eta_base": -146.711, "theta_base": -123.951, "v0": -1.965, "v1": -22.555, "v2": 37.017, "v3": -39.141, "v4": 25.902, "amplitude": 39.735, "phase_angle": 21.316, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.857, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 258.298, 236.680, 231.069 ], "x_axis": [ -0.365, -0.575, 0.732 ], "y_axis": [ -0.766, -0.261, -0.587 ], "z_axis": [ 0.529, -0.775, -0.345 ], "quaternion": [ -0.084, -0.557, 0.602, -0.566 ] } }, { "index": 779, "index_chain": 779, "chain_name": "a", "nt_resnum": 780, "nt_name": "G", "nt_code": "G", "nt_id": "///a/780", "linked_nts": [ "///a/779", "///a/781" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end", "alpha": -70.170, "beta": 171.355, "gamma": 63.135, "delta": 77.209, "epsilon": -136.123, "zeta": -72.147, "epsilon_zeta": -63.976, "bb_type": "BI", "chi": -176.646, "glyco_bond": "anti", "C5prime_xyz": [ -1.460, 8.584, 1.452 ], "P_xyz": [ 1.091, 9.077, 1.790 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.465, "theta": -138.889, "eta_prime": -177.863, "theta_prime": -136.486, "eta_base": -135.003, "theta_base": -106.040, "v0": 1.500, "v1": -25.313, "v2": 38.237, "v3": -38.421, "v4": 23.247, "amplitude": 39.879, "phase_angle": 16.499, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.780, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 261.127, 233.607, 231.489 ], "x_axis": [ -0.787, -0.533, 0.310 ], "y_axis": [ -0.466, 0.185, -0.865 ], "z_axis": [ 0.404, -0.826, -0.394 ], "quaternion": [ 0.030, -0.325, 0.769, -0.550 ] } }, { "index": 780, "index_chain": 780, "chain_name": "a", "nt_resnum": 781, "nt_name": "A", "nt_code": "A", "nt_id": "///a/781", "linked_nts": [ "///a/780", "///a/782" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -63.872, "beta": 165.138, "gamma": 64.540, "delta": 78.965, "epsilon": -146.853, "zeta": -69.887, "epsilon_zeta": -76.966, "bb_type": "BI", "chi": -173.620, "glyco_bond": "anti", "C5prime_xyz": [ -1.787, 8.659, 1.246 ], "P_xyz": [ 0.701, 9.382, 1.489 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.772, "theta": -142.764, "eta_prime": -172.081, "theta_prime": -140.965, "eta_base": -123.865, "theta_base": -100.898, "v0": -2.973, "v1": -20.740, "v2": 35.157, "v3": -37.795, "v4": 25.721, "amplitude": 38.171, "phase_angle": 22.919, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.722, "filter_rmsd": 0.041, "frame": { "rmsd": 0.010, "origin": [ 261.763, 229.672, 232.163 ], "x_axis": [ -0.939, -0.256, -0.229 ], "y_axis": [ 0.090, 0.460, -0.883 ], "z_axis": [ 0.331, -0.850, -0.409 ], "quaternion": [ 0.167, -0.049, 0.838, -0.517 ] } }, { "index": 781, "index_chain": 781, "chain_name": "a", "nt_resnum": 782, "nt_name": "U", "nt_code": "U", "nt_id": "///a/782", "linked_nts": [ "///a/781", "///a/783" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -69.080, "beta": 166.548, "gamma": 66.064, "delta": 80.353, "epsilon": -131.083, "zeta": -55.171, "epsilon_zeta": -75.912, "bb_type": "BI", "chi": -161.183, "glyco_bond": "anti", "C5prime_xyz": [ -1.405, 8.733, 0.611 ], "P_xyz": [ 1.168, 9.137, 0.343 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.461, "theta": -115.512, "eta_prime": -170.167, "theta_prime": -114.053, "eta_base": -114.450, "theta_base": -66.520, "v0": 2.042, "v1": -24.896, "v2": 37.078, "v3": -36.782, "v4": 21.903, "amplitude": 38.486, "phase_angle": 15.547, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.707, "filter_rmsd": 0.107, "frame": { "rmsd": 0.011, "origin": [ 261.091, 225.841, 231.046 ], "x_axis": [ -0.556, -0.023, -0.831 ], "y_axis": [ 0.732, 0.460, -0.502 ], "z_axis": [ 0.394, -0.887, -0.239 ], "quaternion": [ 0.408, 0.236, 0.751, -0.463 ] } }, { "index": 782, "index_chain": 782, "chain_name": "a", "nt_resnum": 783, "nt_name": "U", "nt_code": "U", "nt_id": "///a/783", "linked_nts": [ "///a/782", "///a/784" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -78.893, "beta": 164.764, "gamma": 74.821, "delta": 79.556, "epsilon": -130.766, "zeta": -73.356, "epsilon_zeta": -57.410, "bb_type": "BI", "chi": -152.779, "glyco_bond": "anti", "C5prime_xyz": [ -1.856, 8.841, 0.025 ], "P_xyz": [ 0.507, 9.570, -0.812 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.630, "theta": -108.754, "eta_prime": -168.080, "theta_prime": -153.909, "eta_base": -98.733, "theta_base": 141.570, "v0": -4.473, "v1": -19.276, "v2": 34.268, "v3": -37.732, "v4": 26.633, "amplitude": 37.863, "phase_angle": 25.170, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.252, "filter_rmsd": 0.102, "frame": { "rmsd": 0.009, "origin": [ 260.384, 224.408, 226.532 ], "x_axis": [ 0.186, 0.427, -0.885 ], "y_axis": [ 0.978, 0.010, 0.210 ], "z_axis": [ 0.098, -0.904, -0.415 ], "quaternion": [ 0.442, 0.631, 0.557, -0.312 ] } }, { "index": 783, "index_chain": 783, "chain_name": "a", "nt_resnum": 784, "nt_name": "A", "nt_code": "A", "nt_id": "///a/784", "linked_nts": [ "///a/783", "///a/785" ], "nt_type": "RNA", "dbn": ".", "summary": "turn", "alpha": 158.190, "beta": 157.838, "gamma": 54.019, "delta": 77.089, "epsilon": -117.163, "zeta": -63.514, "epsilon_zeta": -53.649, "bb_type": "--", "chi": -34.198, "glyco_bond": "--", "C5prime_xyz": [ -4.561, 5.024, -2.897 ], "P_xyz": [ -4.171, 2.926, -4.402 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 12.132, "theta": -113.457, "eta_prime": 39.926, "theta_prime": -108.863, "eta_base": 30.116, "theta_base": -103.991, "v0": -2.376, "v1": -21.811, "v2": 36.348, "v3": -38.736, "v4": 25.929, "amplitude": 39.206, "phase_angle": 22.014, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.749, "filter_rmsd": 0.040, "frame": { "rmsd": 0.009, "origin": [ 266.153, 215.015, 233.233 ], "x_axis": [ -0.807, 0.015, 0.591 ], "y_axis": [ -0.584, 0.135, -0.800 ], "z_axis": [ -0.092, -0.991, -0.100 ], "quaternion": [ -0.239, -0.199, 0.715, -0.627 ] } }, { "index": 784, "index_chain": 784, "chain_name": "a", "nt_resnum": 785, "nt_name": "G", "nt_code": "G", "nt_id": "///a/785", "linked_nts": [ "///a/784", "///a/786" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -67.765, "beta": 167.936, "gamma": 54.241, "delta": 84.150, "epsilon": -127.114, "zeta": -72.688, "epsilon_zeta": -54.426, "bb_type": "--", "chi": -153.638, "glyco_bond": "anti", "C5prime_xyz": [ -1.223, 8.748, 0.180 ], "P_xyz": [ 1.386, 8.982, 0.145 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.908, "theta": -125.775, "eta_prime": -175.089, "theta_prime": -122.856, "eta_base": -158.533, "theta_base": -147.978, "v0": 2.736, "v1": -23.418, "v2": 34.024, "v3": -33.403, "v4": 19.389, "amplitude": 35.108, "phase_angle": 14.273, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.467, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 263.614, 218.110, 234.677 ], "x_axis": [ 0.955, 0.286, -0.074 ], "y_axis": [ -0.128, 0.174, -0.976 ], "z_axis": [ -0.266, 0.942, 0.202 ], "quaternion": [ 0.763, -0.628, -0.063, 0.135 ] } }, { "index": 785, "index_chain": 785, "chain_name": "a", "nt_resnum": 786, "nt_name": "A", "nt_code": "A", "nt_id": "///a/786", "linked_nts": [ "///a/785", "///a/787" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -61.084, "beta": -171.756, "gamma": 33.982, "delta": 144.872, "epsilon": -93.225, "zeta": 124.249, "epsilon_zeta": 142.526, "bb_type": "--", "chi": -106.089, "glyco_bond": "anti", "C5prime_xyz": [ -2.769, 8.195, -1.892 ], "P_xyz": [ -1.064, 10.167, -1.691 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 179.325, "theta": 123.853, "eta_prime": -158.438, "theta_prime": 110.469, "eta_base": -177.989, "theta_base": 110.527, "v0": -28.117, "v1": 40.562, "v2": -36.713, "v3": 21.462, "v4": 3.931, "amplitude": 40.299, "phase_angle": 155.645, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.187, "filter_rmsd": 0.039, "frame": { "rmsd": 0.012, "origin": [ 262.295, 220.912, 237.415 ], "x_axis": [ 0.799, -0.548, -0.249 ], "y_axis": [ -0.130, 0.247, -0.960 ], "z_axis": [ 0.588, 0.799, 0.126 ], "quaternion": [ 0.737, -0.597, 0.284, -0.142 ] } }, { "index": 786, "index_chain": 786, "chain_name": "a", "nt_resnum": 787, "nt_name": "U", "nt_code": "U", "nt_id": "///a/787", "linked_nts": [ "///a/786", "///a/788" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": -166.956, "beta": 173.414, "gamma": 63.157, "delta": 80.025, "epsilon": -168.477, "zeta": 26.538, "epsilon_zeta": 164.985, "bb_type": "--", "chi": -165.223, "glyco_bond": "anti", "C5prime_xyz": [ -1.329, 8.667, 0.833 ], "P_xyz": [ 1.261, 9.052, 0.804 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 127.786, "theta": -36.478, "eta_prime": 121.921, "theta_prime": -64.443, "eta_base": 129.711, "theta_base": -47.312, "v0": 3.101, "v1": -25.783, "v2": 37.408, "v3": -36.544, "v4": 21.039, "amplitude": 38.553, "phase_angle": 13.997, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "4g", "suiteness": 0.104, "filter_rmsd": 0.110, "frame": { "rmsd": 0.009, "origin": [ 255.459, 220.598, 238.308 ], "x_axis": [ 0.986, -0.129, -0.101 ], "y_axis": [ 0.006, 0.643, -0.766 ], "z_axis": [ 0.164, 0.755, 0.635 ], "quaternion": [ 0.903, -0.421, 0.073, -0.037 ] } }, { "index": 787, "index_chain": 787, "chain_name": "a", "nt_resnum": 788, "nt_name": "A", "nt_code": "A", "nt_id": "///a/788", "linked_nts": [ "///a/787", "///a/789" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": 98.232, "beta": 147.812, "gamma": -164.459, "delta": 78.310, "epsilon": -132.308, "zeta": -88.845, "epsilon_zeta": -43.464, "bb_type": "BI", "chi": -158.587, "glyco_bond": "anti", "C5prime_xyz": [ -1.396, 8.752, 0.419 ], "P_xyz": [ -1.419, 11.181, -0.562 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 123.846, "theta": 162.608, "eta_prime": 158.546, "theta_prime": 179.331, "eta_base": -140.450, "theta_base": -151.118, "v0": 1.359, "v1": -25.100, "v2": 37.983, "v3": -38.224, "v4": 23.243, "amplitude": 39.650, "phase_angle": 16.671, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.010, "origin": [ 263.785, 224.783, 235.959 ], "x_axis": [ 0.112, 0.084, -0.990 ], "y_axis": [ -0.916, 0.395, -0.070 ], "z_axis": [ 0.385, 0.915, 0.121 ], "quaternion": [ 0.638, -0.386, 0.539, 0.392 ] } }, { "index": 788, "index_chain": 788, "chain_name": "a", "nt_resnum": 789, "nt_name": "C", "nt_code": "C", "nt_id": "///a/789", "linked_nts": [ "///a/788", "///a/790" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -51.218, "beta": 154.680, "gamma": 58.420, "delta": 84.250, "epsilon": -111.512, "zeta": -62.123, "epsilon_zeta": -49.389, "bb_type": "--", "chi": -146.131, "glyco_bond": "anti", "C5prime_xyz": [ -1.840, 8.851, -0.378 ], "P_xyz": [ 0.635, 9.394, -0.965 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -177.880, "theta": -101.052, "eta_prime": -167.500, "theta_prime": -100.758, "eta_base": -142.215, "theta_base": -65.499, "v0": -6.816, "v1": -15.220, "v2": 29.968, "v3": -34.749, "v4": 26.287, "amplitude": 34.504, "phase_angle": 29.712, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.561, "filter_rmsd": 0.061, "frame": { "rmsd": 0.013, "origin": [ 265.998, 226.965, 235.415 ], "x_axis": [ -0.364, 0.086, -0.927 ], "y_axis": [ -0.748, 0.566, 0.347 ], "z_axis": [ 0.555, 0.820, -0.141 ], "quaternion": [ 0.515, -0.230, 0.720, 0.405 ] } }, { "index": 789, "index_chain": 789, "chain_name": "a", "nt_resnum": 790, "nt_name": "C", "nt_code": "C", "nt_id": "///a/790", "linked_nts": [ "///a/789", "///a/791" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -76.579, "beta": 175.738, "gamma": 56.274, "delta": 79.032, "epsilon": -143.980, "zeta": -66.949, "epsilon_zeta": -77.032, "bb_type": "BI", "chi": -159.997, "glyco_bond": "anti", "C5prime_xyz": [ -1.537, 8.836, 0.483 ], "P_xyz": [ 0.972, 9.488, 0.619 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 148.275, "theta": -137.695, "eta_prime": 178.013, "theta_prime": -134.673, "eta_base": -129.326, "theta_base": -104.737, "v0": -1.414, "v1": -22.498, "v2": 36.356, "v3": -38.202, "v4": 24.959, "amplitude": 38.841, "phase_angle": 20.609, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.315, "filter_rmsd": 0.065, "frame": { "rmsd": 0.012, "origin": [ 262.176, 232.844, 231.295 ], "x_axis": [ -0.927, -0.337, 0.166 ], "y_axis": [ 0.119, 0.155, 0.981 ], "z_axis": [ -0.356, 0.929, -0.103 ], "quaternion": [ -0.176, -0.074, 0.739, 0.646 ] } }, { "index": 790, "index_chain": 790, "chain_name": "a", "nt_resnum": 791, "nt_name": "C", "nt_code": "C", "nt_id": "///a/791", "linked_nts": [ "///a/790", "///a/792" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -74.271, "beta": -172.424, "gamma": 56.861, "delta": 80.180, "epsilon": -150.274, "zeta": -77.473, "epsilon_zeta": -72.801, "bb_type": "BI", "chi": -155.243, "glyco_bond": "anti", "C5prime_xyz": [ -1.520, 8.881, 0.199 ], "P_xyz": [ 0.976, 9.581, 0.582 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.432, "theta": -153.492, "eta_prime": -176.553, "theta_prime": -150.267, "eta_base": -135.425, "theta_base": -131.605, "v0": -2.176, "v1": -20.922, "v2": 34.713, "v3": -36.931, "v4": 24.672, "amplitude": 37.402, "phase_angle": 21.859, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.852, "filter_rmsd": 0.063, "frame": { "rmsd": 0.012, "origin": [ 258.260, 235.698, 230.601 ], "x_axis": [ -0.447, -0.505, 0.738 ], "y_axis": [ 0.679, 0.345, 0.648 ], "z_axis": [ -0.582, 0.791, 0.189 ], "quaternion": [ 0.521, -0.069, -0.633, -0.568 ] } }, { "index": 791, "index_chain": 791, "chain_name": "a", "nt_resnum": 792, "nt_name": "U", "nt_code": "U", "nt_id": "///a/792", "linked_nts": [ "///a/791", "///a/793" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -66.062, "beta": 176.081, "gamma": 52.477, "delta": 81.458, "epsilon": -155.027, "zeta": -78.627, "epsilon_zeta": -76.400, "bb_type": "BI", "chi": -152.644, "glyco_bond": "anti", "C5prime_xyz": [ -1.609, 8.769, 0.080 ], "P_xyz": [ 0.907, 9.424, 0.213 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.086, "theta": -121.773, "eta_prime": 178.469, "theta_prime": -129.868, "eta_base": -154.474, "theta_base": -107.330, "v0": -0.174, "v1": -21.845, "v2": 34.342, "v3": -35.377, "v4": 22.459, "amplitude": 36.297, "phase_angle": 18.889, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.965, "filter_rmsd": 0.102, "frame": { "rmsd": 0.011, "origin": [ 255.113, 238.159, 230.685 ], "x_axis": [ 0.030, -0.485, 0.874 ], "y_axis": [ 0.779, 0.560, 0.284 ], "z_axis": [ -0.627, 0.672, 0.395 ], "quaternion": [ 0.704, -0.138, -0.533, -0.448 ] } }, { "index": 792, "index_chain": 792, "chain_name": "a", "nt_resnum": 793, "nt_name": "G", "nt_code": "G", "nt_id": "///a/793", "linked_nts": [ "///a/792", "///a/794" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 143.792, "beta": -152.158, "gamma": -170.982, "delta": 81.106, "epsilon": -129.296, "zeta": -62.576, "epsilon_zeta": -66.720, "bb_type": "BI", "chi": -172.021, "glyco_bond": "anti", "C5prime_xyz": [ -1.416, 8.613, 1.221 ], "P_xyz": [ -0.164, 10.459, -0.155 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.085, "theta": -150.320, "eta_prime": -173.711, "theta_prime": -141.967, "eta_base": -131.625, "theta_base": -83.090, "v0": 1.952, "v1": -24.486, "v2": 36.438, "v3": -36.301, "v4": 21.658, "amplitude": 37.850, "phase_angle": 15.699, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.716, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 251.799, 238.705, 234.006 ], "x_axis": [ 0.468, -0.179, 0.866 ], "y_axis": [ 0.622, 0.763, -0.178 ], "z_axis": [ -0.629, 0.622, 0.468 ], "quaternion": [ 0.821, -0.243, -0.455, -0.244 ] } }, { "index": 793, "index_chain": 793, "chain_name": "a", "nt_resnum": 794, "nt_name": "G", "nt_code": "G", "nt_id": "///a/794", "linked_nts": [ "///a/793", "///a/795" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -68.301, "beta": 163.544, "gamma": 64.927, "delta": 83.112, "epsilon": -141.505, "zeta": -107.423, "epsilon_zeta": -34.082, "bb_type": "BI", "chi": -155.918, "glyco_bond": "anti", "C5prime_xyz": [ -1.297, 8.761, 0.296 ], "P_xyz": [ 1.268, 9.055, -0.144 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.393, "theta": -176.753, "eta_prime": -168.085, "theta_prime": -177.506, "eta_base": -91.403, "theta_base": 174.725, "v0": 1.808, "v1": -23.204, "v2": 34.514, "v3": -34.447, "v4": 20.642, "amplitude": 35.871, "phase_angle": 15.810, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.633, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 252.775, 240.669, 238.463 ], "x_axis": [ 0.752, 0.583, 0.308 ], "y_axis": [ -0.226, 0.667, -0.710 ], "z_axis": [ -0.619, 0.464, 0.634 ], "quaternion": [ 0.874, -0.336, -0.265, 0.232 ] } }, { "index": 794, "index_chain": 794, "chain_name": "a", "nt_resnum": 795, "nt_name": "U", "nt_code": "U", "nt_id": "///a/795", "linked_nts": [ "///a/794", "///a/796" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -91.174, "beta": 159.175, "gamma": 76.532, "delta": 82.095, "epsilon": -156.474, "zeta": -70.590, "epsilon_zeta": -85.884, "bb_type": "BI", "chi": -165.126, "glyco_bond": "anti", "C5prime_xyz": [ -1.386, 8.717, 0.786 ], "P_xyz": [ 1.113, 9.204, 0.209 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.051, "theta": -147.800, "eta_prime": 163.516, "theta_prime": -152.611, "eta_base": 160.812, "theta_base": -128.403, "v0": 0.104, "v1": -22.596, "v2": 35.015, "v3": -35.910, "v4": 22.633, "amplitude": 36.901, "phase_angle": 18.397, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.026, "filter_rmsd": 0.106, "frame": { "rmsd": 0.011, "origin": [ 247.231, 239.102, 240.711 ], "x_axis": [ 0.919, 0.371, 0.133 ], "y_axis": [ -0.193, 0.719, -0.668 ], "z_axis": [ -0.344, 0.588, 0.732 ], "quaternion": [ 0.918, -0.342, -0.130, 0.154 ] } }, { "index": 795, "index_chain": 795, "chain_name": "a", "nt_resnum": 796, "nt_name": "A", "nt_code": "A", "nt_id": "///a/796", "linked_nts": [ "///a/795", "///a/797" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -92.056, "beta": 174.078, "gamma": 77.507, "delta": 80.445, "epsilon": -136.701, "zeta": -43.483, "epsilon_zeta": -93.218, "bb_type": "BI", "chi": -162.156, "glyco_bond": "anti", "C5prime_xyz": [ -1.064, 8.657, 0.649 ], "P_xyz": [ 1.507, 8.948, 0.163 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.322, "theta": -110.414, "eta_prime": 179.422, "theta_prime": -107.242, "eta_base": -140.561, "theta_base": -61.359, "v0": 4.460, "v1": -26.702, "v2": 37.658, "v3": -35.953, "v4": 19.944, "amplitude": 38.506, "phase_angle": 12.047, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.111, "filter_rmsd": 0.045, "frame": { "rmsd": 0.015, "origin": [ 246.788, 240.400, 244.156 ], "x_axis": [ 0.637, 0.733, -0.240 ], "y_axis": [ -0.709, 0.434, -0.556 ], "z_axis": [ -0.303, 0.525, 0.796 ], "quaternion": [ 0.846, -0.319, -0.019, 0.426 ] } }, { "index": 796, "index_chain": 796, "chain_name": "a", "nt_resnum": 797, "nt_name": "G", "nt_code": "G", "nt_id": "///a/797", "linked_nts": [ "///a/796", "///a/798" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -83.961, "beta": 163.124, "gamma": 79.975, "delta": 81.196, "epsilon": -135.660, "zeta": -76.508, "epsilon_zeta": -59.152, "bb_type": "BI", "chi": -167.649, "glyco_bond": "anti", "C5prime_xyz": [ -1.566, 8.763, 0.967 ], "P_xyz": [ 0.962, 9.361, 0.619 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.634, "theta": -139.355, "eta_prime": -160.666, "theta_prime": -139.411, "eta_base": -85.007, "theta_base": -103.946, "v0": -1.107, "v1": -21.522, "v2": 34.770, "v3": -36.326, "v4": 23.567, "amplitude": 37.061, "phase_angle": 20.250, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.052, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 247.949, 246.146, 243.646 ], "x_axis": [ -0.291, 0.663, -0.689 ], "y_axis": [ -0.942, -0.324, 0.086 ], "z_axis": [ -0.166, 0.675, 0.719 ], "quaternion": [ 0.526, -0.280, 0.249, 0.764 ] } }, { "index": 797, "index_chain": 797, "chain_name": "a", "nt_resnum": 798, "nt_name": "U", "nt_code": "U", "nt_id": "///a/798", "linked_nts": [ "///a/797", "///a/799" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -61.988, "beta": 167.139, "gamma": 55.493, "delta": 84.628, "epsilon": -139.617, "zeta": -35.447, "epsilon_zeta": -104.170, "bb_type": "BI", "chi": -158.366, "glyco_bond": "anti", "C5prime_xyz": [ -1.573, 8.766, 0.413 ], "P_xyz": [ 0.966, 9.259, 0.593 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.248, "theta": -92.637, "eta_prime": -174.253, "theta_prime": -92.240, "eta_base": -124.134, "theta_base": -58.360, "v0": -1.855, "v1": -19.304, "v2": 31.832, "v3": -33.819, "v4": 22.587, "amplitude": 34.256, "phase_angle": 21.685, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.873, "filter_rmsd": 0.104, "frame": { "rmsd": 0.012, "origin": [ 247.416, 249.713, 244.729 ], "x_axis": [ -0.792, 0.168, -0.587 ], "y_axis": [ -0.549, -0.616, 0.565 ], "z_axis": [ -0.267, 0.770, 0.580 ], "quaternion": [ 0.207, -0.247, 0.386, 0.864 ] } }, { "index": 798, "index_chain": 798, "chain_name": "a", "nt_resnum": 799, "nt_name": "C", "nt_code": "C", "nt_id": "///a/799", "linked_nts": [ "///a/798", "///a/800" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-stack,canonical,helix-end,stem-end", "alpha": -100.602, "beta": -146.209, "gamma": 52.282, "delta": 82.065, "epsilon": -147.060, "zeta": -72.012, "epsilon_zeta": -75.048, "bb_type": "BI", "chi": -161.964, "glyco_bond": "anti", "C5prime_xyz": [ -1.356, 8.768, 0.652 ], "P_xyz": [ 0.901, 9.036, 1.940 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.191, "theta": -142.473, "eta_prime": -175.662, "theta_prime": -136.924, "eta_base": -122.239, "theta_base": -112.018, "v0": -0.137, "v1": -22.137, "v2": 34.778, "v3": -35.781, "v4": 22.628, "amplitude": 36.735, "phase_angle": 18.786, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1m", "suiteness": 0.097, "filter_rmsd": 0.068, "frame": { "rmsd": 0.011, "origin": [ 238.725, 251.191, 247.261 ], "x_axis": [ -0.235, -0.956, -0.178 ], "y_axis": [ 0.800, -0.294, 0.523 ], "z_axis": [ -0.552, -0.020, 0.834 ], "quaternion": [ 0.571, 0.238, -0.164, -0.769 ] } }, { "index": 799, "index_chain": 799, "chain_name": "a", "nt_resnum": 800, "nt_name": "C", "nt_code": "C", "nt_id": "///a/800", "linked_nts": [ "///a/799", "///a/801" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -70.551, "beta": -172.977, "gamma": 50.296, "delta": 80.676, "epsilon": -152.683, "zeta": -78.816, "epsilon_zeta": -73.868, "bb_type": "BI", "chi": -164.122, "glyco_bond": "anti", "C5prime_xyz": [ -1.463, 8.813, 0.729 ], "P_xyz": [ 0.970, 9.373, 1.543 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.347, "theta": -154.814, "eta_prime": 177.714, "theta_prime": -153.163, "eta_base": -148.785, "theta_base": -140.637, "v0": -1.852, "v1": -20.836, "v2": 34.334, "v3": -36.293, "v4": 24.029, "amplitude": 36.868, "phase_angle": 21.365, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.900, "filter_rmsd": 0.065, "frame": { "rmsd": 0.010, "origin": [ 234.957, 250.497, 250.022 ], "x_axis": [ 0.425, -0.874, -0.235 ], "y_axis": [ 0.847, 0.293, 0.442 ], "z_axis": [ -0.318, -0.387, 0.865 ], "quaternion": [ 0.804, 0.258, -0.026, -0.536 ] } }, { "index": 800, "index_chain": 800, "chain_name": "a", "nt_resnum": 801, "nt_name": "A", "nt_code": "A", "nt_id": "///a/801", "linked_nts": [ "///a/800", "///a/802" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -61.962, "beta": 168.990, "gamma": 51.620, "delta": 79.042, "epsilon": -135.642, "zeta": -76.610, "epsilon_zeta": -59.032, "bb_type": "BI", "chi": -157.870, "glyco_bond": "anti", "C5prime_xyz": [ -1.628, 8.801, 0.348 ], "P_xyz": [ 0.913, 9.459, 0.454 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.545, "theta": -140.368, "eta_prime": 176.606, "theta_prime": -138.288, "eta_base": -162.382, "theta_base": -101.774, "v0": -1.710, "v1": -21.648, "v2": 35.477, "v3": -37.399, "v4": 24.667, "amplitude": 38.026, "phase_angle": 21.098, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.935, "filter_rmsd": 0.041, "frame": { "rmsd": 0.012, "origin": [ 232.454, 249.353, 251.490 ], "x_axis": [ 0.751, -0.653, -0.097 ], "y_axis": [ 0.553, 0.542, 0.633 ], "z_axis": [ -0.361, -0.529, 0.768 ], "quaternion": [ 0.875, 0.332, -0.075, -0.345 ] } }, { "index": 801, "index_chain": 801, "chain_name": "a", "nt_resnum": 802, "nt_name": "C", "nt_code": "C", "nt_id": "///a/802", "linked_nts": [ "///a/801", "///a/803" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -75.047, "beta": 167.877, "gamma": 60.702, "delta": 80.380, "epsilon": -145.063, "zeta": -73.337, "epsilon_zeta": -71.725, "bb_type": "BI", "chi": -156.372, "glyco_bond": "anti", "C5prime_xyz": [ -1.410, 8.827, 0.298 ], "P_xyz": [ 1.162, 9.256, 0.089 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.685, "theta": -143.654, "eta_prime": 174.217, "theta_prime": -146.681, "eta_base": -135.827, "theta_base": -130.632, "v0": 0.399, "v1": -23.182, "v2": 35.808, "v3": -36.513, "v4": 22.821, "amplitude": 37.646, "phase_angle": 17.974, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.793, "filter_rmsd": 0.065, "frame": { "rmsd": 0.011, "origin": [ 232.730, 246.300, 253.400 ], "x_axis": [ 0.996, 0.074, 0.039 ], "y_axis": [ -0.081, 0.721, 0.688 ], "z_axis": [ 0.023, -0.689, 0.725 ], "quaternion": [ 0.928, 0.371, -0.004, 0.042 ] } }, { "index": 802, "index_chain": 802, "chain_name": "a", "nt_resnum": 803, "nt_name": "G", "nt_code": "G", "nt_id": "///a/803", "linked_nts": [ "///a/802", "///a/804" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -76.757, "beta": 167.439, "gamma": 64.578, "delta": 78.647, "epsilon": -154.284, "zeta": -69.997, "epsilon_zeta": -84.286, "bb_type": "BI", "chi": -166.347, "glyco_bond": "anti", "C5prime_xyz": [ -1.751, 8.800, 0.804 ], "P_xyz": [ 0.732, 9.616, 0.736 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.074, "theta": -150.019, "eta_prime": 173.801, "theta_prime": -150.191, "eta_base": -153.370, "theta_base": -127.576, "v0": -3.014, "v1": -21.110, "v2": 35.689, "v3": -38.338, "v4": 26.115, "amplitude": 38.737, "phase_angle": 22.882, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.716, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 233.564, 243.050, 254.839 ], "x_axis": [ 0.805, 0.585, 0.100 ], "y_axis": [ -0.501, 0.580, 0.642 ], "z_axis": [ 0.318, -0.567, 0.760 ], "quaternion": [ 0.887, 0.341, 0.062, 0.306 ] } }, { "index": 803, "index_chain": 803, "chain_name": "a", "nt_resnum": 804, "nt_name": "C", "nt_code": "C", "nt_id": "///a/804", "linked_nts": [ "///a/803", "///a/805" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": -73.226, "beta": 164.898, "gamma": 80.265, "delta": 78.473, "epsilon": -130.283, "zeta": -83.456, "epsilon_zeta": -46.827, "bb_type": "BI", "chi": -156.193, "glyco_bond": "anti", "C5prime_xyz": [ -1.650, 8.909, 0.219 ], "P_xyz": [ 0.726, 9.671, -0.538 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -177.236, "theta": -145.686, "eta_prime": -164.603, "theta_prime": -143.026, "eta_base": -131.267, "theta_base": -106.688, "v0": -4.467, "v1": -19.535, "v2": 34.612, "v3": -38.158, "v4": 26.950, "amplitude": 38.241, "phase_angle": 25.161, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.126, "filter_rmsd": 0.059, "frame": { "rmsd": 0.014, "origin": [ 236.293, 240.596, 256.208 ], "x_axis": [ 0.534, 0.637, 0.557 ], "y_axis": [ -0.777, 0.110, 0.619 ], "z_axis": [ 0.333, -0.763, 0.553 ], "quaternion": [ 0.741, 0.466, -0.075, 0.477 ] } }, { "index": 804, "index_chain": 804, "chain_name": "a", "nt_resnum": 805, "nt_name": "C", "nt_code": "C", "nt_id": "///a/805", "linked_nts": [ "///a/804", "///a/806" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -64.068, "beta": 151.585, "gamma": 71.401, "delta": 88.354, "epsilon": -87.657, "zeta": -119.468, "epsilon_zeta": 31.811, "bb_type": "--", "chi": -159.763, "glyco_bond": "anti", "C5prime_xyz": [ -1.687, 8.898, 0.384 ], "P_xyz": [ 0.870, 9.323, 0.069 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -171.931, "theta": -100.768, "eta_prime": -159.051, "theta_prime": -106.773, "eta_base": -116.592, "theta_base": -86.926, "v0": -7.659, "v1": -13.379, "v2": 27.824, "v3": -32.926, "v4": 25.690, "amplitude": 32.705, "phase_angle": 31.703, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.339, "filter_rmsd": 0.065, "frame": { "rmsd": 0.015, "origin": [ 238.526, 239.389, 259.416 ], "x_axis": [ -0.183, 0.786, 0.591 ], "y_axis": [ -0.905, -0.369, 0.211 ], "z_axis": [ 0.384, -0.496, 0.779 ], "quaternion": [ 0.554, 0.319, -0.093, 0.763 ] } }, { "index": 805, "index_chain": 805, "chain_name": "a", "nt_resnum": 806, "nt_name": "G", "nt_code": "G", "nt_id": "///a/806", "linked_nts": [ "///a/805", "///a/807" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": 99.232, "beta": -107.836, "gamma": -155.253, "delta": 76.379, "epsilon": -162.749, "zeta": -100.390, "epsilon_zeta": -62.359, "bb_type": "BI", "chi": 150.469, "glyco_bond": "anti", "C5prime_xyz": [ -1.449, 7.444, 2.935 ], "P_xyz": [ -0.244, 9.655, 2.300 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.976, "theta": 124.644, "eta_prime": -166.811, "theta_prime": 114.432, "eta_base": -112.697, "theta_base": 85.399, "v0": 10.548, "v1": -36.021, "v2": 46.367, "v3": -41.209, "v4": 19.200, "amplitude": 46.584, "phase_angle": 5.539, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.039, "origin": [ 237.381, 236.325, 268.795 ], "x_axis": [ -0.825, 0.503, 0.257 ], "y_axis": [ -0.444, -0.296, -0.846 ], "z_axis": [ -0.350, -0.812, 0.468 ], "quaternion": [ 0.294, -0.029, -0.515, 0.805 ] } }, { "index": 806, "index_chain": 806, "chain_name": "a", "nt_resnum": 807, "nt_name": "U", "nt_code": "U", "nt_id": "///a/807", "linked_nts": [ "///a/806", "///a/808" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-stack,non-canonical,helix-end,multiplet", "alpha": -91.020, "beta": 111.949, "gamma": 123.419, "delta": 85.248, "epsilon": -153.044, "zeta": -41.943, "epsilon_zeta": -111.101, "bb_type": "BI", "chi": -152.052, "glyco_bond": "anti", "C5prime_xyz": [ -1.910, 8.822, -0.003 ], "P_xyz": [ -1.004, 9.384, -2.383 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -174.172, "theta": -116.115, "eta_prime": 176.248, "theta_prime": -138.879, "eta_base": 138.669, "theta_base": -118.740, "v0": -4.809, "v1": -16.753, "v2": 30.312, "v3": -33.964, "v4": 24.517, "amplitude": 33.874, "phase_angle": 26.512, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.103, "frame": { "rmsd": 0.018, "origin": [ 243.332, 235.358, 260.260 ], "x_axis": [ 0.144, 0.741, 0.655 ], "y_axis": [ -0.336, -0.586, 0.737 ], "z_axis": [ 0.931, -0.326, 0.165 ], "quaternion": [ 0.425, 0.626, 0.162, 0.634 ] } }, { "index": 807, "index_chain": 807, "chain_name": "a", "nt_resnum": 808, "nt_name": "A", "nt_code": "A", "nt_id": "///a/808", "linked_nts": [ "///a/807", "///a/809" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 129.658, "beta": 155.717, "gamma": -166.517, "delta": 79.822, "epsilon": -107.981, "zeta": -118.676, "epsilon_zeta": 10.694, "bb_type": "--", "chi": 179.789, "glyco_bond": "anti", "C5prime_xyz": [ -1.471, 8.417, 1.652 ], "P_xyz": [ -0.930, 10.950, 1.395 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 136.230, "theta": 162.634, "eta_prime": 155.756, "theta_prime": 150.878, "eta_base": -163.552, "theta_base": 139.769, "v0": 0.367, "v1": -23.617, "v2": 36.684, "v3": -37.441, "v4": 23.460, "amplitude": 38.595, "phase_angle": 18.107, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.117, "filter_rmsd": 0.047, "frame": { "rmsd": 0.020, "origin": [ 249.298, 236.435, 264.153 ], "x_axis": [ -0.702, 0.490, 0.517 ], "y_axis": [ -0.601, -0.797, -0.062 ], "z_axis": [ 0.381, -0.354, 0.854 ], "quaternion": [ 0.298, 0.245, -0.114, 0.916 ] } }, { "index": 808, "index_chain": 808, "chain_name": "a", "nt_resnum": 809, "nt_name": "A", "nt_code": "A", "nt_id": "///a/809", "linked_nts": [ "///a/808", "///a/810" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -34.492, "beta": 144.843, "gamma": -99.766, "delta": 148.893, "epsilon": -128.246, "zeta": 91.079, "epsilon_zeta": 140.676, "bb_type": "--", "chi": -113.594, "glyco_bond": "anti", "C5prime_xyz": [ -2.288, 8.374, -1.502 ], "P_xyz": [ -2.602, 10.915, -2.027 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 58.907, "theta": 27.878, "eta_prime": 55.053, "theta_prime": 5.160, "eta_base": 16.655, "theta_base": -12.483, "v0": -24.597, "v1": 39.417, "v2": -38.356, "v3": 25.080, "v4": -0.537, "amplitude": 40.334, "phase_angle": 161.982, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.015, "origin": [ 259.847, 225.893, 262.358 ], "x_axis": [ -0.094, -0.781, -0.618 ], "y_axis": [ -0.995, 0.090, 0.038 ], "z_axis": [ 0.025, 0.618, -0.785 ], "quaternion": [ 0.229, -0.633, 0.702, 0.234 ] } }, { "index": 809, "index_chain": 809, "chain_name": "a", "nt_resnum": 810, "nt_name": "A", "nt_code": "A", "nt_id": "///a/810", "linked_nts": [ "///a/809", "///a/811" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": -94.250, "beta": -127.898, "gamma": -103.689, "delta": 79.399, "epsilon": -169.206, "zeta": 160.522, "epsilon_zeta": 30.272, "bb_type": "--", "chi": -135.731, "glyco_bond": "anti", "C5prime_xyz": [ -1.829, 8.701, -0.946 ], "P_xyz": [ -2.806, 10.589, -2.456 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 70.830, "theta": 31.573, "eta_prime": 79.466, "theta_prime": 7.432, "eta_base": 101.466, "theta_base": -40.173, "v0": -3.676, "v1": -19.764, "v2": 34.204, "v3": -37.263, "v4": 25.925, "amplitude": 37.471, "phase_angle": 24.105, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.046, "frame": { "rmsd": 0.027, "origin": [ 241.903, 232.852, 267.309 ], "x_axis": [ -0.334, -0.939, -0.083 ], "y_axis": [ 0.942, -0.336, 0.014 ], "z_axis": [ -0.041, -0.073, 0.996 ], "quaternion": [ 0.576, 0.038, 0.018, -0.816 ] } }, { "index": 810, "index_chain": 810, "chain_name": "a", "nt_resnum": 811, "nt_name": "C", "nt_code": "C", "nt_id": "///a/811", "linked_nts": [ "///a/810", "///a/812" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-stack,canonical", "alpha": 58.765, "beta": -162.008, "gamma": 128.840, "delta": 147.322, "epsilon": -89.069, "zeta": 133.265, "epsilon_zeta": 137.666, "bb_type": "BII", "chi": -158.975, "glyco_bond": "anti", "C5prime_xyz": [ -1.832, 8.691, 0.861 ], "P_xyz": [ 0.682, 8.995, 1.442 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 72.488, "theta": 154.895, "eta_prime": 98.258, "theta_prime": 106.583, "eta_base": 143.788, "theta_base": 83.727, "v0": -23.242, "v1": 37.276, "v2": -36.281, "v3": 23.834, "v4": -0.595, "amplitude": 38.128, "phase_angle": 162.090, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.064, "frame": { "rmsd": 0.014, "origin": [ 256.347, 226.457, 266.962 ], "x_axis": [ -0.770, -0.632, -0.085 ], "y_axis": [ -0.544, 0.580, 0.606 ], "z_axis": [ -0.334, 0.513, -0.790 ], "quaternion": [ -0.070, -0.332, 0.886, 0.316 ] } }, { "index": 811, "index_chain": 811, "chain_name": "a", "nt_resnum": 812, "nt_name": "G", "nt_code": "G", "nt_id": "///a/812", "linked_nts": [ "///a/811", "///a/813" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": 82.526, "beta": -142.142, "gamma": 56.786, "delta": 143.119, "epsilon": -119.273, "zeta": -63.705, "epsilon_zeta": -55.568, "bb_type": "--", "chi": -109.020, "glyco_bond": "anti", "C5prime_xyz": [ -2.620, 8.349, -1.799 ], "P_xyz": [ -0.747, 10.088, -1.198 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 49.407, "theta": -63.171, "eta_prime": 47.178, "theta_prime": -96.445, "eta_base": 33.247, "theta_base": -120.986, "v0": -27.844, "v1": 40.247, "v2": -36.478, "v3": 21.260, "v4": 3.872, "amplitude": 40.025, "phase_angle": 155.695, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "6p", "suiteness": 0.012, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 257.072, 232.654, 281.907 ], "x_axis": [ -0.831, 0.503, 0.236 ], "y_axis": [ -0.166, 0.180, -0.969 ], "z_axis": [ -0.531, -0.845, -0.067 ], "quaternion": [ -0.266, 0.117, 0.721, -0.629 ] } }, { "index": 812, "index_chain": 812, "chain_name": "a", "nt_resnum": 813, "nt_name": "A", "nt_code": "A", "nt_id": "///a/813", "linked_nts": [ "///a/812", "///a/814" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -74.954, "beta": 168.029, "gamma": -170.177, "delta": 151.593, "epsilon": -88.076, "zeta": -56.703, "epsilon_zeta": -31.373, "bb_type": "--", "chi": -133.274, "glyco_bond": "anti", "C5prime_xyz": [ -1.027, 8.394, -0.329 ], "P_xyz": [ 0.744, 9.714, -1.729 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -21.663, "theta": -80.034, "eta_prime": 6.341, "theta_prime": -72.287, "eta_base": 33.291, "theta_base": -55.203, "v0": -11.047, "v1": 28.370, "v2": -33.859, "v3": 28.348, "v4": -11.184, "amplitude": 33.859, "phase_angle": 180.064, "puckering": "C3'-exo", "sugar_class": "--", "bin": "22t", "cluster": "2u", "suiteness": 0.678, "filter_rmsd": 0.040, "frame": { "rmsd": 0.014, "origin": [ 257.775, 221.432, 267.992 ], "x_axis": [ 0.988, -0.077, -0.135 ], "y_axis": [ 0.146, 0.755, 0.639 ], "z_axis": [ 0.053, -0.651, 0.758 ], "quaternion": [ 0.936, 0.345, 0.050, -0.060 ] } }, { "index": 813, "index_chain": 813, "chain_name": "a", "nt_resnum": 814, "nt_name": "U", "nt_code": "U", "nt_id": "///a/814", "linked_nts": [ "///a/813", "///a/815" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical", "alpha": -96.700, "beta": -170.151, "gamma": 78.338, "delta": 143.486, "epsilon": -158.487, "zeta": 40.166, "epsilon_zeta": 161.347, "bb_type": "--", "chi": -104.553, "glyco_bond": "anti", "C5prime_xyz": [ -2.595, 8.170, -1.994 ], "P_xyz": [ -0.252, 9.222, -2.402 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 138.432, "theta": 53.177, "eta_prime": -156.776, "theta_prime": 26.118, "eta_base": -146.306, "theta_base": 149.317, "v0": -27.501, "v1": 40.023, "v2": -36.575, "v3": 21.644, "v4": 3.347, "amplitude": 39.920, "phase_angle": 156.380, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "2[", "suiteness": 0.074, "filter_rmsd": 0.099, "frame": { "rmsd": 0.017, "origin": [ 261.601, 226.762, 280.115 ], "x_axis": [ 0.569, 0.478, -0.669 ], "y_axis": [ -0.822, 0.369, -0.434 ], "z_axis": [ 0.039, 0.797, 0.603 ], "quaternion": [ 0.797, -0.386, 0.222, 0.408 ] } }, { "index": 814, "index_chain": 814, "chain_name": "a", "nt_resnum": 815, "nt_name": "G", "nt_code": "G", "nt_id": "///a/815", "linked_nts": [ "///a/814", "///a/816" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 83.733, "beta": 123.141, "gamma": -26.174, "delta": 85.882, "epsilon": -158.237, "zeta": -71.104, "epsilon_zeta": -87.132, "bb_type": "BI", "chi": -155.612, "glyco_bond": "anti", "C5prime_xyz": [ -1.311, 8.674, 0.238 ], "P_xyz": [ 0.719, 9.166, 1.801 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -135.761, "theta": -154.143, "eta_prime": -122.040, "theta_prime": -148.193, "eta_base": 129.330, "theta_base": -124.471, "v0": 5.173, "v1": -26.037, "v2": 35.636, "v3": -33.480, "v4": 17.995, "amplitude": 36.239, "phase_angle": 10.468, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 245.558, 226.892, 287.968 ], "x_axis": [ 0.636, -0.650, 0.416 ], "y_axis": [ 0.601, 0.078, -0.796 ], "z_axis": [ 0.485, 0.756, 0.440 ], "quaternion": [ 0.734, -0.529, 0.023, -0.426 ] } }, { "index": 815, "index_chain": 815, "chain_name": "a", "nt_resnum": 816, "nt_name": "U", "nt_code": "U", "nt_id": "///a/816", "linked_nts": [ "///a/815", "///a/817" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -86.864, "beta": 167.473, "gamma": 76.086, "delta": 79.356, "epsilon": -137.396, "zeta": -66.688, "epsilon_zeta": -70.709, "bb_type": "BI", "chi": -155.355, "glyco_bond": "anti", "C5prime_xyz": [ -1.561, 8.717, 0.262 ], "P_xyz": [ 0.872, 9.177, -0.578 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.330, "theta": -131.120, "eta_prime": 179.138, "theta_prime": -133.681, "eta_base": -148.391, "theta_base": -106.120, "v0": 4.375, "v1": -27.796, "v2": 39.461, "v3": -37.883, "v4": 21.060, "amplitude": 40.408, "phase_angle": 12.431, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.192, "filter_rmsd": 0.110, "frame": { "rmsd": 0.020, "origin": [ 246.483, 228.890, 290.476 ], "x_axis": [ 0.851, -0.521, 0.058 ], "y_axis": [ 0.357, 0.495, -0.792 ], "z_axis": [ 0.384, 0.695, 0.607 ], "quaternion": [ 0.859, -0.433, 0.095, -0.255 ] } }, { "index": 816, "index_chain": 816, "chain_name": "a", "nt_resnum": 817, "nt_name": "C", "nt_code": "C", "nt_id": "///a/817", "linked_nts": [ "///a/816", "///a/818" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -75.261, "beta": 178.080, "gamma": 64.381, "delta": 75.485, "epsilon": -147.424, "zeta": -74.075, "epsilon_zeta": -73.349, "bb_type": "BI", "chi": -151.462, "glyco_bond": "anti", "C5prime_xyz": [ -1.771, 8.909, -0.052 ], "P_xyz": [ 0.661, 9.771, -0.384 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.488, "theta": -151.045, "eta_prime": -179.985, "theta_prime": -152.192, "eta_base": -134.696, "theta_base": -133.711, "v0": -2.533, "v1": -22.728, "v2": 37.940, "v3": -40.342, "v4": 27.017, "amplitude": 40.918, "phase_angle": 21.994, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.693, "filter_rmsd": 0.063, "frame": { "rmsd": 0.015, "origin": [ 249.825, 229.127, 293.101 ], "x_axis": [ 0.713, -0.320, -0.624 ], "y_axis": [ -0.122, 0.820, -0.560 ], "z_axis": [ 0.691, 0.475, 0.545 ], "quaternion": [ 0.877, -0.295, 0.375, -0.056 ] } }, { "index": 817, "index_chain": 817, "chain_name": "a", "nt_resnum": 818, "nt_name": "G", "nt_code": "G", "nt_id": "///a/818", "linked_nts": [ "///a/817", "///a/819" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -63.383, "beta": 174.844, "gamma": 49.516, "delta": 76.114, "epsilon": -155.555, "zeta": -79.136, "epsilon_zeta": -76.419, "bb_type": "BI", "chi": -164.743, "glyco_bond": "anti", "C5prime_xyz": [ -1.748, 8.847, 0.695 ], "P_xyz": [ 0.639, 9.784, 1.126 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.459, "theta": -162.515, "eta_prime": 172.608, "theta_prime": -158.999, "eta_base": -156.658, "theta_base": -137.442, "v0": -3.341, "v1": -21.539, "v2": 36.722, "v3": -39.670, "v4": 27.170, "amplitude": 39.978, "phase_angle": 23.286, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.845, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 253.340, 229.363, 295.301 ], "x_axis": [ 0.201, -0.157, -0.967 ], "y_axis": [ -0.455, 0.859, -0.234 ], "z_axis": [ 0.868, 0.487, 0.101 ], "quaternion": [ 0.735, -0.245, 0.624, 0.101 ] } }, { "index": 818, "index_chain": 818, "chain_name": "a", "nt_resnum": 819, "nt_name": "A", "nt_code": "A", "nt_id": "///a/819", "linked_nts": [ "///a/818", "///a/820" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -61.406, "beta": 166.651, "gamma": 61.554, "delta": 74.806, "epsilon": -159.805, "zeta": -84.875, "epsilon_zeta": -74.930, "bb_type": "BI", "chi": -163.593, "glyco_bond": "anti", "C5prime_xyz": [ -1.507, 8.694, 0.683 ], "P_xyz": [ 1.005, 9.286, 0.346 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.168, "theta": -142.944, "eta_prime": -176.113, "theta_prime": -144.986, "eta_base": -144.257, "theta_base": -117.332, "v0": 2.167, "v1": -26.948, "v2": 40.397, "v3": -40.082, "v4": 23.911, "amplitude": 41.957, "phase_angle": 15.671, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.751, "filter_rmsd": 0.042, "frame": { "rmsd": 0.016, "origin": [ 257.612, 229.640, 296.147 ], "x_axis": [ 0.108, 0.286, -0.952 ], "y_axis": [ -0.490, 0.849, 0.199 ], "z_axis": [ 0.865, 0.445, 0.232 ], "quaternion": [ 0.740, -0.083, 0.614, 0.262 ] } }, { "index": 819, "index_chain": 819, "chain_name": "a", "nt_resnum": 820, "nt_name": "C", "nt_code": "C", "nt_id": "///a/820", "linked_nts": [ "///a/819", "///a/821" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -166.362, "beta": -154.536, "gamma": 141.395, "delta": 82.550, "epsilon": -141.691, "zeta": -65.831, "epsilon_zeta": -75.860, "bb_type": "BI", "chi": -169.091, "glyco_bond": "anti", "C5prime_xyz": [ -1.069, 8.565, 1.128 ], "P_xyz": [ 1.185, 9.156, -0.041 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.015, "theta": -138.112, "eta_prime": 178.537, "theta_prime": -143.048, "eta_base": -138.417, "theta_base": -118.454, "v0": 4.370, "v1": -26.181, "v2": 36.923, "v3": -35.366, "v4": 19.550, "amplitude": 37.762, "phase_angle": 12.101, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.074, "frame": { "rmsd": 0.018, "origin": [ 261.320, 230.410, 294.902 ], "x_axis": [ -0.372, 0.644, -0.668 ], "y_axis": [ -0.310, 0.592, 0.744 ], "z_axis": [ 0.875, 0.484, -0.021 ], "quaternion": [ 0.548, 0.119, 0.704, 0.436 ] } }, { "index": 820, "index_chain": 820, "chain_name": "a", "nt_resnum": 821, "nt_name": "U", "nt_code": "U", "nt_id": "///a/821", "linked_nts": [ "///a/820", "///a/822" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": -76.742, "beta": 178.206, "gamma": 62.012, "delta": 77.812, "epsilon": -108.172, "zeta": -88.622, "epsilon_zeta": -19.550, "bb_type": "--", "chi": -159.850, "glyco_bond": "anti", "C5prime_xyz": [ -1.526, 8.763, 0.481 ], "P_xyz": [ 1.009, 9.386, 0.422 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.034, "theta": -155.673, "eta_prime": -174.554, "theta_prime": -166.358, "eta_base": -134.526, "theta_base": -171.752, "v0": 1.754, "v1": -25.834, "v2": 38.702, "v3": -38.656, "v4": 23.309, "amplitude": 40.282, "phase_angle": 16.098, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.777, "filter_rmsd": 0.105, "frame": { "rmsd": 0.012, "origin": [ 263.942, 232.138, 292.798 ], "x_axis": [ -0.551, 0.827, -0.112 ], "y_axis": [ 0.060, 0.173, 0.983 ], "z_axis": [ 0.832, 0.535, -0.145 ], "quaternion": [ 0.345, 0.324, 0.684, 0.555 ] } }, { "index": 821, "index_chain": 821, "chain_name": "a", "nt_resnum": 822, "nt_name": "A", "nt_code": "A", "nt_id": "///a/822", "linked_nts": [ "///a/821", "///a/823" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -34.073, "beta": -99.909, "gamma": -66.071, "delta": 75.064, "epsilon": -150.082, "zeta": -58.224, "epsilon_zeta": -91.857, "bb_type": "BI", "chi": -144.079, "glyco_bond": "anti", "C5prime_xyz": [ -1.915, 8.794, -0.517 ], "P_xyz": [ -3.220, 11.082, -0.280 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.699, "theta": -170.829, "eta_prime": 135.898, "theta_prime": -156.077, "eta_base": 114.184, "theta_base": -111.587, "v0": -0.902, "v1": -24.709, "v2": 39.505, "v3": -40.901, "v4": 26.359, "amplitude": 41.952, "phase_angle": 19.667, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.014, "origin": [ 277.328, 232.381, 292.294 ], "x_axis": [ -0.399, 0.302, -0.866 ], "y_axis": [ -0.844, 0.246, 0.476 ], "z_axis": [ 0.357, 0.921, 0.156 ], "quaternion": [ 0.501, -0.222, 0.610, 0.572 ] } }, { "index": 822, "index_chain": 822, "chain_name": "a", "nt_resnum": 823, "nt_name": "G", "nt_code": "G", "nt_id": "///a/823", "linked_nts": [ "///a/822", "///a/824" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 135.975, "beta": -157.112, "gamma": -160.768, "delta": 80.735, "epsilon": -139.192, "zeta": -69.901, "epsilon_zeta": -69.291, "bb_type": "BI", "chi": -172.233, "glyco_bond": "anti", "C5prime_xyz": [ -1.144, 8.548, 1.235 ], "P_xyz": [ -0.046, 10.630, 0.069 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.952, "theta": -170.150, "eta_prime": -164.081, "theta_prime": -161.205, "eta_base": -102.850, "theta_base": -118.470, "v0": 5.400, "v1": -27.514, "v2": 38.077, "v3": -35.886, "v4": 19.195, "amplitude": 38.753, "phase_angle": 10.711, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.292, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 274.323, 236.203, 287.878 ], "x_axis": [ -0.980, 0.102, -0.172 ], "y_axis": [ -0.162, 0.103, 0.981 ], "z_axis": [ 0.118, 0.989, -0.084 ], "quaternion": [ 0.099, -0.020, 0.736, 0.669 ] } }, { "index": 823, "index_chain": 823, "chain_name": "a", "nt_resnum": 824, "nt_name": "C", "nt_code": "C", "nt_id": "///a/824", "linked_nts": [ "///a/823", "///a/825" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -75.798, "beta": 176.119, "gamma": 63.326, "delta": 80.646, "epsilon": -154.612, "zeta": -74.649, "epsilon_zeta": -79.963, "bb_type": "BI", "chi": -165.223, "glyco_bond": "anti", "C5prime_xyz": [ -1.235, 8.716, 0.833 ], "P_xyz": [ 1.361, 9.015, 0.856 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.772, "theta": -150.823, "eta_prime": -178.692, "theta_prime": -152.374, "eta_base": -123.572, "theta_base": -143.426, "v0": 2.660, "v1": -25.638, "v2": 37.645, "v3": -36.942, "v4": 21.620, "amplitude": 38.908, "phase_angle": 14.639, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.760, "filter_rmsd": 0.072, "frame": { "rmsd": 0.014, "origin": [ 272.733, 239.416, 286.280 ], "x_axis": [ -0.836, 0.024, 0.548 ], "y_axis": [ 0.548, 0.105, 0.830 ], "z_axis": [ -0.037, 0.994, -0.101 ], "quaternion": [ -0.205, 0.200, 0.715, 0.638 ] } }, { "index": 824, "index_chain": 824, "chain_name": "a", "nt_resnum": 825, "nt_name": "C", "nt_code": "C", "nt_id": "///a/825", "linked_nts": [ "///a/824", "///a/826" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem,multiplet", "alpha": -68.254, "beta": 168.992, "gamma": 65.917, "delta": 77.999, "epsilon": -145.843, "zeta": -24.292, "epsilon_zeta": -121.550, "bb_type": "--", "chi": -155.320, "glyco_bond": "anti", "C5prime_xyz": [ -1.466, 8.854, 0.228 ], "P_xyz": [ 1.052, 9.399, -0.237 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.741, "theta": -116.707, "eta_prime": -177.170, "theta_prime": -135.572, "eta_base": -154.661, "theta_base": -130.280, "v0": 0.575, "v1": -23.941, "v2": 36.997, "v3": -37.546, "v4": 23.339, "amplitude": 38.838, "phase_angle": 17.714, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.709, "filter_rmsd": 0.067, "frame": { "rmsd": 0.012, "origin": [ 271.677, 241.659, 284.207 ], "x_axis": [ -0.576, 0.164, 0.801 ], "y_axis": [ 0.799, 0.318, 0.510 ], "z_axis": [ -0.171, 0.934, -0.314 ], "quaternion": [ -0.327, 0.324, 0.743, 0.486 ] } }, { "index": 825, "index_chain": 825, "chain_name": "a", "nt_resnum": 826, "nt_name": "G", "nt_code": "G", "nt_id": "///a/826", "linked_nts": [ "///a/825", "///a/827" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -146.431, "beta": 102.547, "gamma": 168.785, "delta": 81.163, "epsilon": -119.945, "zeta": -66.388, "epsilon_zeta": -53.557, "bb_type": "--", "chi": 177.638, "glyco_bond": "anti", "C5prime_xyz": [ -1.077, 8.235, 1.851 ], "P_xyz": [ -0.948, 10.678, 0.904 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.341, "theta": -172.759, "eta_prime": 176.649, "theta_prime": -156.432, "eta_base": -160.174, "theta_base": -100.592, "v0": 7.598, "v1": -29.209, "v2": 38.599, "v3": -35.170, "v4": 17.439, "amplitude": 38.939, "phase_angle": 7.577, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 268.143, 245.070, 282.840 ], "x_axis": [ -0.265, -0.035, 0.964 ], "y_axis": [ 0.951, 0.158, 0.267 ], "z_axis": [ -0.161, 0.987, -0.009 ], "quaternion": [ -0.470, 0.383, 0.598, 0.524 ] } }, { "index": 826, "index_chain": 826, "chain_name": "a", "nt_resnum": 827, "nt_name": "U", "nt_code": "U", "nt_id": "///a/827", "linked_nts": [ "///a/826", "///a/828" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -76.303, "beta": 173.353, "gamma": 61.975, "delta": 81.815, "epsilon": -153.571, "zeta": -87.814, "epsilon_zeta": -65.756, "bb_type": "BI", "chi": -160.694, "glyco_bond": "anti", "C5prime_xyz": [ -1.460, 8.728, 0.559 ], "P_xyz": [ 1.121, 9.181, 0.558 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.286, "theta": -163.260, "eta_prime": -179.411, "theta_prime": -165.878, "eta_base": -110.855, "theta_base": -161.981, "v0": 0.776, "v1": -23.058, "v2": 35.328, "v3": -35.826, "v4": 22.086, "amplitude": 37.023, "phase_angle": 17.402, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.499, "filter_rmsd": 0.103, "frame": { "rmsd": 0.010, "origin": [ 266.691, 247.608, 285.833 ], "x_axis": [ 0.610, -0.031, 0.792 ], "y_axis": [ 0.760, 0.305, -0.574 ], "z_axis": [ -0.224, 0.952, 0.210 ], "quaternion": [ 0.729, -0.523, -0.348, -0.271 ] } }, { "index": 827, "index_chain": 827, "chain_name": "a", "nt_resnum": 828, "nt_name": "U", "nt_code": "U", "nt_id": "///a/828", "linked_nts": [ "///a/827", "///a/829" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -68.512, "beta": 162.517, "gamma": 68.952, "delta": 74.934, "epsilon": -145.267, "zeta": -50.514, "epsilon_zeta": -94.753, "bb_type": "BI", "chi": -171.384, "glyco_bond": "anti", "C5prime_xyz": [ -1.581, 8.696, 1.150 ], "P_xyz": [ 0.914, 9.404, 0.974 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.859, "theta": -125.679, "eta_prime": 176.631, "theta_prime": -124.479, "eta_base": -169.986, "theta_base": -135.979, "v0": 0.697, "v1": -26.159, "v2": 40.369, "v3": -40.838, "v4": 25.349, "amplitude": 42.344, "phase_angle": 17.566, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.492, "filter_rmsd": 0.105, "frame": { "rmsd": 0.013, "origin": [ 262.762, 250.691, 286.351 ], "x_axis": [ 0.756, -0.014, 0.655 ], "y_axis": [ 0.635, 0.260, -0.727 ], "z_axis": [ -0.160, 0.966, 0.206 ], "quaternion": [ 0.745, -0.568, -0.273, -0.218 ] } }, { "index": 828, "index_chain": 828, "chain_name": "a", "nt_resnum": 829, "nt_name": "G", "nt_code": "G", "nt_id": "///a/829", "linked_nts": [ "///a/828", "///a/830" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -83.741, "beta": -144.152, "gamma": 35.426, "delta": 139.844, "epsilon": -163.960, "zeta": -112.891, "epsilon_zeta": -51.069, "bb_type": "BI", "chi": -100.827, "glyco_bond": "anti", "C5prime_xyz": [ -2.935, 8.216, -1.974 ], "P_xyz": [ -1.395, 10.333, -1.744 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.684, "theta": -142.747, "eta_prime": -179.883, "theta_prime": -154.427, "eta_base": -177.698, "theta_base": -110.237, "v0": -30.082, "v1": 41.196, "v2": -35.684, "v3": 19.129, "v4": 6.546, "amplitude": 40.461, "phase_angle": 151.878, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1[", "suiteness": 0.240, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 261.242, 251.621, 289.381 ], "x_axis": [ 0.870, -0.472, 0.141 ], "y_axis": [ 0.420, 0.562, -0.713 ], "z_axis": [ 0.257, 0.680, 0.687 ], "quaternion": [ 0.883, -0.394, 0.033, -0.252 ] } }, { "index": 829, "index_chain": 829, "chain_name": "a", "nt_resnum": 830, "nt_name": "G", "nt_code": "G", "nt_id": "///a/830", "linked_nts": [ "///a/829", "///a/831" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -25.380, "beta": 168.618, "gamma": -6.133, "delta": 77.211, "epsilon": 167.566, "zeta": -89.578, "epsilon_zeta": -102.855, "bb_type": "BI", "chi": -144.553, "glyco_bond": "anti", "C5prime_xyz": [ -2.125, 8.867, -0.492 ], "P_xyz": [ -0.423, 10.730, 0.142 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.757, "theta": -174.657, "eta_prime": 162.740, "theta_prime": -171.860, "eta_base": -139.041, "theta_base": -141.195, "v0": -5.926, "v1": -18.558, "v2": 34.365, "v3": -38.673, "v4": 28.282, "amplitude": 38.633, "phase_angle": 27.186, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 264.470, 253.278, 292.569 ], "x_axis": [ 0.779, -0.296, -0.553 ], "y_axis": [ -0.291, 0.611, -0.736 ], "z_axis": [ 0.556, 0.734, 0.390 ], "quaternion": [ 0.834, -0.441, 0.333, -0.001 ] } }, { "index": 830, "index_chain": 830, "chain_name": "a", "nt_resnum": 831, "nt_name": "G", "nt_code": "G", "nt_id": "///a/831", "linked_nts": [ "///a/830", "///a/832" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 156.968, "beta": -139.137, "gamma": 171.651, "delta": 86.756, "epsilon": -142.111, "zeta": -14.766, "epsilon_zeta": -127.345, "bb_type": "--", "chi": -172.892, "glyco_bond": "anti", "C5prime_xyz": [ -1.110, 8.452, 1.360 ], "P_xyz": [ 0.888, 9.442, -0.024 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.101, "theta": -115.371, "eta_prime": -172.030, "theta_prime": -137.166, "eta_base": -133.922, "theta_base": -121.505, "v0": 4.889, "v1": -23.596, "v2": 32.395, "v3": -30.443, "v4": 16.184, "amplitude": 32.926, "phase_angle": 10.312, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.321, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 267.178, 255.407, 294.951 ], "x_axis": [ 0.632, 0.121, -0.766 ], "y_axis": [ -0.624, 0.665, -0.409 ], "z_axis": [ 0.460, 0.737, 0.496 ], "quaternion": [ 0.836, -0.343, 0.367, 0.223 ] } }, { "index": 831, "index_chain": 831, "chain_name": "a", "nt_resnum": 832, "nt_name": "A", "nt_code": "A", "nt_id": "///a/832", "linked_nts": [ "///a/831", "///a/833" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -148.254, "beta": 99.785, "gamma": 162.229, "delta": 84.118, "epsilon": -93.525, "zeta": -114.075, "epsilon_zeta": 20.550, "bb_type": "--", "chi": 174.573, "glyco_bond": "anti", "C5prime_xyz": [ -1.029, 7.988, 2.020 ], "P_xyz": [ -0.633, 10.367, 1.034 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.141, "theta": 174.457, "eta_prime": 177.230, "theta_prime": -166.216, "eta_base": -143.880, "theta_base": -115.816, "v0": 9.414, "v1": -29.300, "v2": 37.073, "v3": -32.614, "v4": 14.716, "amplitude": 37.178, "phase_angle": 4.319, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.044, "frame": { "rmsd": 0.018, "origin": [ 271.088, 256.510, 296.125 ], "x_axis": [ 0.254, 0.374, -0.892 ], "y_axis": [ -0.831, 0.556, -0.004 ], "z_axis": [ 0.494, 0.742, 0.453 ], "quaternion": [ 0.752, -0.248, 0.461, 0.401 ] } }, { "index": 832, "index_chain": 832, "chain_name": "a", "nt_resnum": 833, "nt_name": "U", "nt_code": "U", "nt_id": "///a/833", "linked_nts": [ "///a/832", "///a/834" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -36.847, "beta": 125.991, "gamma": 53.298, "delta": 80.175, "epsilon": -132.221, "zeta": -69.201, "epsilon_zeta": -63.020, "bb_type": "BI", "chi": -154.412, "glyco_bond": "anti", "C5prime_xyz": [ -1.604, 8.786, 0.155 ], "P_xyz": [ 0.916, 8.618, -0.563 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.268, "theta": -118.390, "eta_prime": -176.728, "theta_prime": -121.575, "eta_base": -122.298, "theta_base": -79.687, "v0": -0.306, "v1": -22.443, "v2": 35.332, "v3": -36.400, "v4": 23.201, "amplitude": 37.370, "phase_angle": 19.010, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.383, "filter_rmsd": 0.107, "frame": { "rmsd": 0.009, "origin": [ 273.107, 258.867, 295.972 ], "x_axis": [ -0.296, 0.670, -0.680 ], "y_axis": [ -0.620, 0.407, 0.671 ], "z_axis": [ 0.727, 0.620, 0.295 ], "quaternion": [ 0.593, 0.021, 0.593, 0.544 ] } }, { "index": 833, "index_chain": 833, "chain_name": "a", "nt_resnum": 834, "nt_name": "C", "nt_code": "C", "nt_id": "///a/834", "linked_nts": [ "///a/833", "///a/835" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end,stem-end", "alpha": -61.373, "beta": 161.511, "gamma": 59.596, "delta": 81.010, "epsilon": -95.074, "zeta": -124.050, "epsilon_zeta": 28.976, "bb_type": "--", "chi": -148.537, "glyco_bond": "anti", "C5prime_xyz": [ -1.573, 8.811, -0.136 ], "P_xyz": [ 0.952, 9.204, -0.714 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.319, "theta": -133.777, "eta_prime": -163.273, "theta_prime": -165.957, "eta_base": -104.009, "theta_base": 152.079, "v0": 0.717, "v1": -22.900, "v2": 35.058, "v3": -35.659, "v4": 22.027, "amplitude": 36.764, "phase_angle": 17.523, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.786, "filter_rmsd": 0.064, "frame": { "rmsd": 0.005, "origin": [ 273.156, 263.471, 295.066 ], "x_axis": [ -0.796, 0.604, 0.036 ], "y_axis": [ 0.000, -0.059, 0.998 ], "z_axis": [ 0.605, 0.795, 0.047 ], "quaternion": [ 0.219, 0.232, 0.650, 0.690 ] } }, { "index": 834, "index_chain": 834, "chain_name": "a", "nt_resnum": 835, "nt_name": "C", "nt_code": "C", "nt_id": "///a/835", "linked_nts": [ "///a/834", "///a/836" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-stack", "alpha": 59.333, "beta": -148.926, "gamma": 175.865, "delta": 79.212, "epsilon": -98.415, "zeta": -128.361, "epsilon_zeta": 29.946, "bb_type": "--", "chi": -153.052, "glyco_bond": "anti", "C5prime_xyz": [ -1.623, 8.856, 0.075 ], "P_xyz": [ -0.511, 9.946, -2.023 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 83.579, "theta": -165.339, "eta_prime": 90.477, "theta_prime": -147.631, "eta_base": 68.667, "theta_base": -60.892, "v0": -0.505, "v1": -22.809, "v2": 36.073, "v3": -37.351, "v4": 23.899, "amplitude": 38.228, "phase_angle": 19.331, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.061, "frame": { "rmsd": 0.005, "origin": [ 283.663, 261.802, 296.833 ], "x_axis": [ -0.639, -0.632, -0.438 ], "y_axis": [ -0.743, 0.359, 0.565 ], "z_axis": [ -0.200, 0.687, -0.699 ], "quaternion": [ 0.073, -0.419, 0.821, 0.381 ] } }, { "index": 835, "index_chain": 835, "chain_name": "a", "nt_resnum": 836, "nt_name": "U", "nt_code": "U", "nt_id": "///a/836", "linked_nts": [ "///a/835", "///a/837" ], "nt_type": "RNA", "dbn": ".", "summary": "BI", "alpha": -17.106, "beta": 107.788, "gamma": 60.033, "delta": 86.042, "epsilon": -171.158, "zeta": -99.608, "epsilon_zeta": -71.549, "bb_type": "BI", "chi": -86.175, "glyco_bond": "--", "C5prime_xyz": [ -2.675, 6.971, -3.106 ], "P_xyz": [ -0.979, 5.194, -4.034 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.001, "theta": -133.876, "eta_prime": -159.327, "theta_prime": 172.001, "eta_base": -72.942, "theta_base": 132.735, "v0": 2.513, "v1": -22.044, "v2": 32.112, "v3": -31.518, "v4": 18.381, "amplitude": 33.151, "phase_angle": 14.381, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.102, "frame": { "rmsd": 0.009, "origin": [ 278.251, 262.746, 297.779 ], "x_axis": [ -0.979, -0.159, -0.131 ], "y_axis": [ -0.115, 0.949, -0.294 ], "z_axis": [ 0.171, -0.273, -0.947 ], "quaternion": [ 0.077, -0.069, 0.984, -0.144 ] } }, { "index": 836, "index_chain": 836, "chain_name": "a", "nt_resnum": 837, "nt_name": "U", "nt_code": "U", "nt_id": "///a/837", "linked_nts": [ "///a/836", "///a/838" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn", "alpha": 115.062, "beta": -169.283, "gamma": 168.454, "delta": 79.996, "epsilon": -103.436, "zeta": -36.657, "epsilon_zeta": -66.779, "bb_type": "--", "chi": 57.217, "glyco_bond": "syn", "C5prime_xyz": [ -5.504, 4.491, 1.575 ], "P_xyz": [ -5.880, 3.913, 4.101 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 118.131, "theta": -131.667, "eta_prime": 108.215, "theta_prime": -131.056, "eta_base": 109.844, "theta_base": -87.824, "v0": -7.368, "v1": -15.518, "v2": 31.040, "v3": -36.207, "v4": 27.461, "amplitude": 35.901, "phase_angle": 30.163, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.041, "filter_rmsd": 0.112, "frame": { "rmsd": 0.011, "origin": [ 281.949, 264.635, 294.883 ], "x_axis": [ 0.837, -0.453, 0.307 ], "y_axis": [ 0.547, 0.698, -0.462 ], "z_axis": [ -0.005, 0.555, 0.832 ], "quaternion": [ 0.917, -0.277, -0.085, -0.272 ] } }, { "index": 837, "index_chain": 837, "chain_name": "a", "nt_resnum": 838, "nt_name": "G", "nt_code": "G", "nt_id": "///a/838", "linked_nts": [ "///a/837", "///a/839" ], "nt_type": "RNA", "dbn": ".", "summary": "syn", "alpha": -100.210, "beta": 80.465, "gamma": 177.014, "delta": 146.258, "epsilon": -121.923, "zeta": -48.504, "epsilon_zeta": -73.419, "bb_type": "--", "chi": 42.837, "glyco_bond": "syn", "C5prime_xyz": [ -5.394, 3.715, 0.275 ], "P_xyz": [ -6.529, 3.453, 2.620 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -123.605, "theta": -131.574, "eta_prime": -123.036, "theta_prime": -172.716, "eta_base": -70.548, "theta_base": 111.797, "v0": -19.981, "v1": 34.054, "v2": -34.363, "v3": 23.763, "v4": -2.567, "amplitude": 35.522, "phase_angle": 165.321, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 278.499, 264.366, 295.018 ], "x_axis": [ 0.543, -0.500, 0.674 ], "y_axis": [ 0.747, -0.078, -0.660 ], "z_axis": [ 0.383, 0.862, 0.331 ], "quaternion": [ 0.670, -0.568, -0.109, -0.465 ] } }, { "index": 838, "index_chain": 838, "chain_name": "a", "nt_resnum": 839, "nt_name": "A", "nt_code": "A", "nt_id": "///a/839", "linked_nts": [ "///a/838", "///a/840" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,non-stack", "alpha": 176.689, "beta": 111.311, "gamma": 55.122, "delta": 80.261, "epsilon": -152.247, "zeta": 39.304, "epsilon_zeta": 168.448, "bb_type": "--", "chi": -55.769, "glyco_bond": "--", "C5prime_xyz": [ -3.795, 5.711, -3.319 ], "P_xyz": [ -2.537, 3.579, -4.185 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -8.827, "theta": -22.596, "eta_prime": 66.664, "theta_prime": -57.570, "eta_base": 77.246, "theta_base": -73.785, "v0": -0.976, "v1": -21.846, "v2": 35.056, "v3": -36.604, "v4": 23.669, "amplitude": 37.320, "phase_angle": 20.063, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2g", "suiteness": 0.058, "filter_rmsd": 0.035, "frame": { "rmsd": 0.008, "origin": [ 286.817, 264.893, 285.329 ], "x_axis": [ 0.393, -0.237, 0.889 ], "y_axis": [ -0.657, -0.748, 0.091 ], "z_axis": [ 0.644, -0.619, -0.450 ], "quaternion": [ 0.221, 0.805, -0.278, 0.476 ] } }, { "index": 839, "index_chain": 839, "chain_name": "a", "nt_resnum": 840, "nt_name": "G", "nt_code": "G", "nt_id": "///a/840", "linked_nts": [ "///a/839", "///a/841" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": 158.063, "beta": 122.281, "gamma": -135.095, "delta": 87.672, "epsilon": -139.441, "zeta": -76.469, "epsilon_zeta": -62.972, "bb_type": "BI", "chi": 179.251, "glyco_bond": "anti", "C5prime_xyz": [ -0.989, 8.161, 1.754 ], "P_xyz": [ -0.983, 10.505, 2.901 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -161.511, "theta": 167.157, "eta_prime": -129.913, "theta_prime": -173.638, "eta_base": -110.731, "theta_base": -128.470, "v0": 8.987, "v1": -27.386, "v2": 34.455, "v3": -30.246, "v4": 13.471, "amplitude": 34.537, "phase_angle": 3.962, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 275.514, 262.297, 296.020 ], "x_axis": [ -0.824, 0.494, -0.278 ], "y_axis": [ 0.337, 0.034, -0.941 ], "z_axis": [ -0.456, -0.869, -0.195 ], "quaternion": [ -0.062, 0.290, 0.716, -0.632 ] } }, { "index": 840, "index_chain": 840, "chain_name": "a", "nt_resnum": 841, "nt_name": "A", "nt_code": "A", "nt_id": "///a/841", "linked_nts": [ "///a/840", "///a/842" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -60.555, "beta": 169.106, "gamma": 52.295, "delta": 81.482, "epsilon": -116.756, "zeta": -113.983, "epsilon_zeta": -2.772, "bb_type": "--", "chi": -171.864, "glyco_bond": "anti", "C5prime_xyz": [ -1.245, 8.417, 1.218 ], "P_xyz": [ 1.349, 8.524, 1.527 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.749, "theta": -151.071, "eta_prime": -172.726, "theta_prime": -144.319, "eta_base": -132.644, "theta_base": -119.831, "v0": 6.092, "v1": -27.654, "v2": 37.641, "v3": -35.189, "v4": 18.336, "amplitude": 38.185, "phase_angle": 9.689, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.855, "filter_rmsd": 0.035, "frame": { "rmsd": 0.013, "origin": [ 273.053, 259.462, 296.628 ], "x_axis": [ -0.509, 0.353, -0.785 ], "y_axis": [ 0.773, -0.212, -0.597 ], "z_axis": [ -0.377, -0.911, -0.165 ], "quaternion": [ -0.169, -0.466, -0.605, 0.624 ] } }, { "index": 841, "index_chain": 841, "chain_name": "a", "nt_resnum": 842, "nt_name": "U", "nt_code": "U", "nt_id": "///a/842", "linked_nts": [ "///a/841", "///a/843" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -37.954, "beta": 132.076, "gamma": 52.914, "delta": 79.314, "epsilon": -148.142, "zeta": -73.308, "epsilon_zeta": -74.834, "bb_type": "BI", "chi": -162.441, "glyco_bond": "anti", "C5prime_xyz": [ -1.400, 8.724, 0.663 ], "P_xyz": [ 1.145, 8.627, 0.066 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.678, "theta": -137.370, "eta_prime": -179.291, "theta_prime": -143.510, "eta_base": -142.456, "theta_base": -121.825, "v0": 1.671, "v1": -24.591, "v2": 37.006, "v3": -36.946, "v4": 22.245, "amplitude": 38.522, "phase_angle": 16.125, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.479, "filter_rmsd": 0.107, "frame": { "rmsd": 0.008, "origin": [ 270.756, 256.912, 296.284 ], "x_axis": [ -0.049, 0.241, -0.969 ], "y_axis": [ 0.852, -0.496, -0.166 ], "z_axis": [ -0.521, -0.834, -0.181 ], "quaternion": [ 0.262, 0.638, 0.428, -0.584 ] } }, { "index": 842, "index_chain": 842, "chain_name": "a", "nt_resnum": 843, "nt_name": "C", "nt_code": "C", "nt_id": "///a/843", "linked_nts": [ "///a/842", "///a/844" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -65.820, "beta": 167.544, "gamma": 62.683, "delta": 77.706, "epsilon": -146.022, "zeta": -72.145, "epsilon_zeta": -73.878, "bb_type": "BI", "chi": -167.628, "glyco_bond": "anti", "C5prime_xyz": [ -1.342, 8.732, 0.952 ], "P_xyz": [ 1.240, 9.168, 0.887 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.734, "theta": -144.398, "eta_prime": -176.985, "theta_prime": -144.737, "eta_base": -133.153, "theta_base": -133.429, "v0": 2.172, "v1": -25.938, "v2": 38.611, "v3": -38.288, "v4": 22.698, "amplitude": 40.062, "phase_angle": 15.465, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.825, "filter_rmsd": 0.068, "frame": { "rmsd": 0.010, "origin": [ 267.727, 254.875, 294.569 ], "x_axis": [ 0.480, -0.005, -0.877 ], "y_axis": [ 0.726, -0.559, 0.400 ], "z_axis": [ -0.492, -0.829, -0.265 ], "quaternion": [ 0.405, 0.759, 0.238, -0.451 ] } }, { "index": 843, "index_chain": 843, "chain_name": "a", "nt_resnum": 844, "nt_name": "U", "nt_code": "U", "nt_id": "///a/844", "linked_nts": [ "///a/843", "///a/845" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -65.494, "beta": 173.567, "gamma": 58.202, "delta": 79.829, "epsilon": -149.040, "zeta": -122.757, "epsilon_zeta": -26.283, "bb_type": "--", "chi": -145.514, "glyco_bond": "anti", "C5prime_xyz": [ -1.902, 8.802, -0.375 ], "P_xyz": [ 0.549, 9.643, -0.693 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.976, "theta": -150.958, "eta_prime": -177.235, "theta_prime": -154.874, "eta_base": -153.149, "theta_base": -138.432, "v0": -3.349, "v1": -19.940, "v2": 34.313, "v3": -37.244, "v4": 25.596, "amplitude": 37.459, "phase_angle": 23.650, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.930, "filter_rmsd": 0.101, "frame": { "rmsd": 0.010, "origin": [ 265.696, 254.459, 292.904 ], "x_axis": [ 0.761, -0.198, -0.618 ], "y_axis": [ 0.264, -0.776, 0.573 ], "z_axis": [ -0.593, -0.600, -0.538 ], "quaternion": [ 0.334, 0.877, 0.019, -0.345 ] } }, { "index": 844, "index_chain": 844, "chain_name": "a", "nt_resnum": 845, "nt_name": "U", "nt_code": "U", "nt_id": "///a/845", "linked_nts": [ "///a/844", "///a/846" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 136.587, "beta": -119.709, "gamma": 174.738, "delta": 78.858, "epsilon": -114.648, "zeta": -84.598, "epsilon_zeta": -30.050, "bb_type": "--", "chi": -162.829, "glyco_bond": "anti", "C5prime_xyz": [ -1.375, 8.671, 0.726 ], "P_xyz": [ 0.075, 9.368, -1.319 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.026, "theta": -145.249, "eta_prime": 176.122, "theta_prime": -148.541, "eta_base": -157.372, "theta_base": -122.191, "v0": 3.663, "v1": -26.501, "v2": 38.151, "v3": -37.030, "v4": 21.001, "amplitude": 39.210, "phase_angle": 13.351, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.110, "frame": { "rmsd": 0.013, "origin": [ 263.449, 252.648, 290.109 ], "x_axis": [ 0.838, -0.414, -0.356 ], "y_axis": [ -0.082, -0.740, 0.668 ], "z_axis": [ -0.540, -0.530, -0.654 ], "quaternion": [ 0.333, 0.899, -0.138, -0.249 ] } }, { "index": 845, "index_chain": 845, "chain_name": "a", "nt_resnum": 846, "nt_name": "A", "nt_code": "A", "nt_id": "///a/846", "linked_nts": [ "///a/845", "///a/847" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -69.294, "beta": 163.583, "gamma": 61.155, "delta": 76.367, "epsilon": -142.120, "zeta": -38.215, "epsilon_zeta": -103.905, "bb_type": "BI", "chi": -170.717, "glyco_bond": "anti", "C5prime_xyz": [ -1.664, 8.629, 1.116 ], "P_xyz": [ 0.847, 9.282, 1.057 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.744, "theta": -118.973, "eta_prime": 173.469, "theta_prime": -133.267, "eta_base": -142.993, "theta_base": -124.062, "v0": 0.463, "v1": -25.141, "v2": 39.004, "v3": -39.721, "v4": 24.755, "amplitude": 40.998, "phase_angle": 17.943, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.365, "filter_rmsd": 0.041, "frame": { "rmsd": 0.011, "origin": [ 263.355, 249.400, 286.150 ], "x_axis": [ 0.795, -0.405, 0.451 ], "y_axis": [ -0.574, -0.265, 0.775 ], "z_axis": [ -0.194, -0.875, -0.443 ], "quaternion": [ 0.521, 0.791, -0.309, 0.081 ] } }, { "index": 846, "index_chain": 846, "chain_name": "a", "nt_resnum": 847, "nt_name": "G", "nt_code": "G", "nt_id": "///a/847", "linked_nts": [ "///a/846", "///a/848" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -146.810, "beta": 127.086, "gamma": 158.285, "delta": 80.018, "epsilon": -129.330, "zeta": -65.389, "epsilon_zeta": -63.941, "bb_type": "BI", "chi": -172.741, "glyco_bond": "anti", "C5prime_xyz": [ -1.440, 8.628, 1.256 ], "P_xyz": [ -0.936, 10.770, -0.179 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.421, "theta": -168.772, "eta_prime": -179.684, "theta_prime": -157.354, "eta_base": -152.119, "theta_base": -103.668, "v0": 1.121, "v1": -23.857, "v2": 36.257, "v3": -36.627, "v4": 22.392, "amplitude": 37.907, "phase_angle": 16.965, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1f", "suiteness": 0.010, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 265.939, 247.674, 283.627 ], "x_axis": [ 0.549, -0.389, 0.740 ], "y_axis": [ -0.834, -0.320, 0.450 ], "z_axis": [ 0.062, -0.864, -0.500 ], "quaternion": [ 0.427, 0.770, -0.397, 0.261 ] } }, { "index": 847, "index_chain": 847, "chain_name": "a", "nt_resnum": 848, "nt_name": "U", "nt_code": "U", "nt_id": "///a/848", "linked_nts": [ "///a/847", "///a/849" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -69.566, "beta": 168.498, "gamma": 57.876, "delta": 77.757, "epsilon": -159.300, "zeta": -79.949, "epsilon_zeta": -79.351, "bb_type": "BI", "chi": -157.077, "glyco_bond": "anti", "C5prime_xyz": [ -1.677, 8.833, 0.309 ], "P_xyz": [ 0.833, 9.545, 0.182 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.602, "theta": -132.862, "eta_prime": 179.654, "theta_prime": -150.502, "eta_base": -111.452, "theta_base": -157.006, "v0": -1.573, "v1": -22.631, "v2": 36.820, "v3": -38.659, "v4": 25.362, "amplitude": 39.378, "phase_angle": 20.763, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.759, "filter_rmsd": 0.105, "frame": { "rmsd": 0.012, "origin": [ 267.866, 244.430, 284.504 ], "x_axis": [ -0.250, -0.388, 0.887 ], "y_axis": [ -0.938, -0.129, -0.321 ], "z_axis": [ 0.239, -0.912, -0.332 ], "quaternion": [ -0.269, -0.550, 0.603, -0.512 ] } }, { "index": 848, "index_chain": 848, "chain_name": "a", "nt_resnum": 849, "nt_name": "G", "nt_code": "G", "nt_id": "///a/849", "linked_nts": [ "///a/848", "///a/850" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": 135.266, "beta": -173.842, "gamma": -163.083, "delta": 79.399, "epsilon": -148.255, "zeta": -70.673, "epsilon_zeta": -77.582, "bb_type": "BI", "chi": -178.011, "glyco_bond": "anti", "C5prime_xyz": [ -1.477, 8.541, 1.523 ], "P_xyz": [ -0.542, 10.894, 0.839 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.167, "theta": 177.050, "eta_prime": 163.267, "theta_prime": -171.155, "eta_base": 173.157, "theta_base": -138.613, "v0": 1.385, "v1": -24.963, "v2": 37.697, "v3": -37.891, "v4": 23.009, "amplitude": 39.333, "phase_angle": 16.584, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.380, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 272.033, 242.226, 283.936 ], "x_axis": [ -0.489, -0.023, 0.872 ], "y_axis": [ -0.870, -0.065, -0.490 ], "z_axis": [ 0.067, -0.998, 0.012 ], "quaternion": [ 0.338, 0.375, -0.594, 0.626 ] } }, { "index": 849, "index_chain": 849, "chain_name": "a", "nt_resnum": 850, "nt_name": "G", "nt_code": "G", "nt_id": "///a/850", "linked_nts": [ "///a/849", "///a/851" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -71.997, "beta": 179.910, "gamma": 63.235, "delta": 80.697, "epsilon": -153.938, "zeta": -78.861, "epsilon_zeta": -75.077, "bb_type": "BI", "chi": -166.126, "glyco_bond": "anti", "C5prime_xyz": [ -1.384, 8.768, 0.856 ], "P_xyz": [ 1.172, 9.249, 1.161 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.414, "theta": -123.381, "eta_prime": -173.764, "theta_prime": -134.023, "eta_base": -135.432, "theta_base": -112.749, "v0": -0.469, "v1": -22.415, "v2": 35.511, "v3": -36.685, "v4": 23.435, "amplitude": 37.615, "phase_angle": 19.253, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.804, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 273.745, 238.839, 285.699 ], "x_axis": [ -0.891, -0.077, 0.446 ], "y_axis": [ -0.445, -0.032, -0.895 ], "z_axis": [ 0.083, -0.997, -0.006 ], "quaternion": [ 0.133, 0.191, -0.683, 0.692 ] } }, { "index": 850, "index_chain": 850, "chain_name": "a", "nt_resnum": 851, "nt_name": "C", "nt_code": "C", "nt_id": "///a/851", "linked_nts": [ "///a/850", "///a/852" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 154.173, "beta": -161.648, "gamma": 176.216, "delta": 79.867, "epsilon": -143.168, "zeta": -54.325, "epsilon_zeta": -88.842, "bb_type": "BI", "chi": -173.068, "glyco_bond": "anti", "C5prime_xyz": [ -1.205, 8.607, 1.309 ], "P_xyz": [ 0.409, 10.292, 0.133 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.076, "theta": -148.866, "eta_prime": 175.072, "theta_prime": -143.705, "eta_base": -142.179, "theta_base": -89.243, "v0": 3.034, "v1": -26.139, "v2": 38.037, "v3": -37.153, "v4": 21.523, "amplitude": 39.226, "phase_angle": 14.145, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.867, "filter_rmsd": 0.070, "frame": { "rmsd": 0.013, "origin": [ 273.476, 235.944, 288.292 ], "x_axis": [ -0.996, 0.025, -0.082 ], "y_axis": [ 0.078, -0.139, -0.987 ], "z_axis": [ -0.036, -0.990, 0.136 ], "quaternion": [ -0.018, -0.039, -0.656, 0.754 ] } }, { "index": 851, "index_chain": 851, "chain_name": "a", "nt_resnum": 852, "nt_name": "G", "nt_code": "G", "nt_id": "///a/852", "linked_nts": [ "///a/851", "///a/853" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -81.373, "beta": 177.030, "gamma": 67.645, "delta": 81.555, "epsilon": -165.863, "zeta": -90.381, "epsilon_zeta": -75.483, "bb_type": "BI", "chi": -151.698, "glyco_bond": "anti", "C5prime_xyz": [ -1.258, 8.761, 0.028 ], "P_xyz": [ 1.321, 9.095, -0.293 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.920, "theta": -176.693, "eta_prime": -170.026, "theta_prime": -172.836, "eta_base": -96.211, "theta_base": 174.910, "v0": 2.083, "v1": -24.077, "v2": 35.704, "v3": -35.441, "v4": 21.118, "amplitude": 37.045, "phase_angle": 15.464, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.490, "filter_rmsd": 0.022, "frame": { "rmsd": 0.022, "origin": [ 270.200, 233.292, 288.160 ], "x_axis": [ -0.554, -0.197, -0.809 ], "y_axis": [ 0.816, -0.325, -0.479 ], "z_axis": [ -0.168, -0.925, 0.341 ], "quaternion": [ -0.340, -0.328, -0.471, 0.745 ] } }, { "index": 852, "index_chain": 852, "chain_name": "a", "nt_resnum": 853, "nt_name": "C", "nt_code": "C", "nt_id": "///a/853", "linked_nts": [ "///a/852", "///a/854" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -58.057, "beta": -160.986, "gamma": 39.194, "delta": 136.496, "epsilon": -153.233, "zeta": -72.795, "epsilon_zeta": -80.438, "bb_type": "BI", "chi": -149.009, "glyco_bond": "anti", "C5prime_xyz": [ -2.026, 8.799, 0.209 ], "P_xyz": [ -0.380, 9.799, 1.994 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.335, "theta": -110.913, "eta_prime": -176.673, "theta_prime": -128.103, "eta_base": 169.345, "theta_base": -85.999, "v0": -25.137, "v1": 33.917, "v2": -29.233, "v3": 15.331, "v4": 5.906, "amplitude": 33.386, "phase_angle": 151.118, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.243, "filter_rmsd": 0.059, "frame": { "rmsd": 0.014, "origin": [ 270.555, 230.682, 295.038 ], "x_axis": [ -0.476, 0.569, -0.671 ], "y_axis": [ 0.752, -0.133, -0.646 ], "z_axis": [ -0.456, -0.812, -0.364 ], "quaternion": [ 0.082, 0.505, 0.653, -0.558 ] } }, { "index": 853, "index_chain": 853, "chain_name": "a", "nt_resnum": 854, "nt_name": "A", "nt_code": "A", "nt_id": "///a/854", "linked_nts": [ "///a/853", "///a/855" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -135.314, "beta": 137.323, "gamma": 123.650, "delta": 75.814, "epsilon": -116.056, "zeta": -61.826, "epsilon_zeta": -54.230, "bb_type": "--", "chi": -163.404, "glyco_bond": "anti", "C5prime_xyz": [ -1.860, 8.822, 0.687 ], "P_xyz": [ -0.592, 10.185, -1.172 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.396, "theta": -135.695, "eta_prime": 172.300, "theta_prime": -130.618, "eta_base": -127.375, "theta_base": -70.966, "v0": -2.732, "v1": -21.755, "v2": 36.711, "v3": -39.239, "v4": 26.447, "amplitude": 39.718, "phase_angle": 22.441, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.042, "frame": { "rmsd": 0.014, "origin": [ 267.545, 227.759, 292.960 ], "x_axis": [ 0.001, 0.008, -1.000 ], "y_axis": [ 0.899, -0.437, -0.003 ], "z_axis": [ -0.437, -0.899, -0.008 ], "quaternion": [ 0.373, 0.601, 0.377, -0.598 ] } }, { "index": 854, "index_chain": 854, "chain_name": "a", "nt_resnum": 855, "nt_name": "G", "nt_code": "G", "nt_id": "///a/855", "linked_nts": [ "///a/854", "///a/856" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -68.283, "beta": 154.413, "gamma": 64.451, "delta": 79.828, "epsilon": -124.968, "zeta": -93.548, "epsilon_zeta": -31.420, "bb_type": "--", "chi": -165.884, "glyco_bond": "anti", "C5prime_xyz": [ -1.176, 8.681, 0.841 ], "P_xyz": [ 1.368, 8.931, 0.334 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.048, "theta": -145.258, "eta_prime": -173.973, "theta_prime": -143.979, "eta_base": -92.961, "theta_base": -129.077, "v0": 2.837, "v1": -25.735, "v2": 37.657, "v3": -36.994, "v4": 21.598, "amplitude": 38.900, "phase_angle": 14.522, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.350, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 269.980, 224.417, 288.063 ], "x_axis": [ 0.952, -0.186, -0.243 ], "y_axis": [ 0.160, -0.377, 0.913 ], "z_axis": [ -0.262, -0.908, -0.329 ], "quaternion": [ 0.558, 0.815, -0.008, -0.155 ] } }, { "index": 855, "index_chain": 855, "chain_name": "a", "nt_resnum": 856, "nt_name": "C", "nt_code": "C", "nt_id": "///a/856", "linked_nts": [ "///a/855", "///a/857" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end,multiplet", "alpha": -52.732, "beta": 148.117, "gamma": 61.991, "delta": 81.281, "epsilon": -146.767, "zeta": -63.323, "epsilon_zeta": -83.444, "bb_type": "BI", "chi": -153.803, "glyco_bond": "anti", "C5prime_xyz": [ -1.765, 8.887, 0.119 ], "P_xyz": [ 0.721, 9.369, -0.482 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.623, "theta": -131.978, "eta_prime": -174.765, "theta_prime": -136.121, "eta_base": -146.376, "theta_base": -105.716, "v0": -4.255, "v1": -18.790, "v2": 33.215, "v3": -36.515, "v4": 25.775, "amplitude": 36.661, "phase_angle": 25.040, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.366, "filter_rmsd": 0.064, "frame": { "rmsd": 0.013, "origin": [ 269.651, 222.186, 285.720 ], "x_axis": [ 0.958, -0.196, 0.210 ], "y_axis": [ -0.281, -0.477, 0.833 ], "z_axis": [ -0.063, -0.857, -0.512 ], "quaternion": [ 0.492, 0.858, -0.139, 0.043 ] } }, { "index": 856, "index_chain": 856, "chain_name": "a", "nt_resnum": 857, "nt_name": "U", "nt_code": "U", "nt_id": "///a/857", "linked_nts": [ "///a/856", "///a/858" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical", "alpha": -73.912, "beta": 173.105, "gamma": 58.993, "delta": 75.665, "epsilon": -119.148, "zeta": -102.903, "epsilon_zeta": -16.245, "bb_type": "--", "chi": -137.241, "glyco_bond": "anti", "C5prime_xyz": [ -2.166, 8.772, -0.867 ], "P_xyz": [ 0.123, 9.730, -1.639 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.922, "theta": -123.692, "eta_prime": -176.965, "theta_prime": -163.457, "eta_base": -132.873, "theta_base": 148.389, "v0": -5.749, "v1": -19.170, "v2": 35.372, "v3": -39.630, "v4": 28.665, "amplitude": 39.611, "phase_angle": 26.751, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.833, "filter_rmsd": 0.101, "frame": { "rmsd": 0.011, "origin": [ 271.562, 219.688, 284.316 ], "x_axis": [ 0.650, -0.338, 0.681 ], "y_axis": [ -0.723, -0.551, 0.416 ], "z_axis": [ 0.235, -0.763, -0.603 ], "quaternion": [ 0.352, 0.837, -0.317, 0.273 ] } }, { "index": 857, "index_chain": 857, "chain_name": "a", "nt_resnum": 858, "nt_name": "A", "nt_code": "A", "nt_id": "///a/858", "linked_nts": [ "///a/857", "///a/859" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": 112.121, "beta": -175.862, "gamma": 93.598, "delta": 86.202, "epsilon": -106.503, "zeta": -97.968, "epsilon_zeta": -8.535, "bb_type": "--", "chi": -163.698, "glyco_bond": "anti", "C5prime_xyz": [ -1.197, 8.575, 0.744 ], "P_xyz": [ 1.334, 8.800, 0.139 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 25.600, "theta": -135.536, "eta_prime": 47.596, "theta_prime": -133.336, "eta_base": 38.062, "theta_base": -88.130, "v0": 3.763, "v1": -24.541, "v2": 34.878, "v3": -33.572, "v4": 18.916, "amplitude": 35.753, "phase_angle": 12.696, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.015, "origin": [ 263.530, 214.472, 276.069 ], "x_axis": [ -0.688, 0.654, 0.315 ], "y_axis": [ 0.176, -0.272, 0.946 ], "z_axis": [ 0.704, 0.706, 0.072 ], "quaternion": [ 0.168, 0.358, 0.580, 0.713 ] } }, { "index": 858, "index_chain": 858, "chain_name": "a", "nt_resnum": 859, "nt_name": "A", "nt_code": "A", "nt_id": "///a/859", "linked_nts": [ "///a/858", "///a/860" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -62.820, "beta": 131.897, "gamma": 70.810, "delta": 83.326, "epsilon": -146.567, "zeta": -69.343, "epsilon_zeta": -77.224, "bb_type": "BI", "chi": -152.585, "glyco_bond": "anti", "C5prime_xyz": [ -1.145, 8.637, 0.069 ], "P_xyz": [ 1.065, 8.320, -1.296 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.102, "theta": -132.280, "eta_prime": -179.777, "theta_prime": -141.700, "eta_base": -115.428, "theta_base": -119.759, "v0": 4.478, "v1": -26.016, "v2": 36.494, "v3": -34.751, "v4": 19.154, "amplitude": 37.278, "phase_angle": 11.773, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.797, "filter_rmsd": 0.044, "frame": { "rmsd": 0.017, "origin": [ 264.326, 217.712, 277.919 ], "x_axis": [ -0.427, 0.269, 0.863 ], "y_axis": [ 0.773, -0.387, 0.503 ], "z_axis": [ 0.469, 0.882, -0.042 ], "quaternion": [ -0.189, 0.500, 0.520, 0.666 ] } }, { "index": 859, "index_chain": 859, "chain_name": "a", "nt_resnum": 860, "nt_name": "C", "nt_code": "C", "nt_id": "///a/860", "linked_nts": [ "///a/859", "///a/861" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix-end,stem-end", "alpha": -76.770, "beta": 168.348, "gamma": 69.142, "delta": 83.322, "epsilon": -139.797, "zeta": -31.156, "epsilon_zeta": -108.641, "bb_type": "--", "chi": -140.932, "glyco_bond": "anti", "C5prime_xyz": [ -1.620, 8.743, -0.617 ], "P_xyz": [ 0.824, 9.109, -1.476 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.585, "theta": -100.030, "eta_prime": -175.243, "theta_prime": -94.195, "eta_base": -133.022, "theta_base": -62.569, "v0": 0.117, "v1": -21.835, "v2": 33.911, "v3": -34.748, "v4": 21.879, "amplitude": 35.733, "phase_angle": 18.379, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.550, "filter_rmsd": 0.069, "frame": { "rmsd": 0.019, "origin": [ 264.329, 220.341, 278.684 ], "x_axis": [ -0.025, -0.041, 0.999 ], "y_axis": [ 0.994, -0.111, 0.020 ], "z_axis": [ 0.110, 0.993, 0.044 ], "quaternion": [ -0.476, 0.511, 0.466, 0.543 ] } }, { "index": 860, "index_chain": 860, "chain_name": "a", "nt_resnum": 861, "nt_name": "G", "nt_code": "G", "nt_id": "///a/861", "linked_nts": [ "///a/860", "///a/862" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix-end,stem-end,multiplet", "alpha": -96.688, "beta": 156.540, "gamma": 106.079, "delta": 81.221, "epsilon": -169.551, "zeta": -94.556, "epsilon_zeta": -74.995, "bb_type": "BI", "chi": -159.183, "glyco_bond": "anti", "C5prime_xyz": [ -1.125, 8.668, 0.487 ], "P_xyz": [ 0.864, 9.289, -1.089 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.039, "theta": -150.884, "eta_prime": -141.089, "theta_prime": -160.645, "eta_base": -76.502, "theta_base": -154.184, "v0": 4.682, "v1": -26.594, "v2": 37.279, "v3": -35.604, "v4": 19.551, "amplitude": 38.078, "phase_angle": 11.757, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 269.853, 221.955, 285.359 ], "x_axis": [ 0.960, -0.064, 0.272 ], "y_axis": [ 0.279, 0.241, -0.930 ], "z_axis": [ -0.006, 0.968, 0.249 ], "quaternion": [ 0.783, -0.606, -0.089, -0.110 ] } }, { "index": 861, "index_chain": 861, "chain_name": "a", "nt_resnum": 862, "nt_name": "C", "nt_code": "C", "nt_id": "///a/862", "linked_nts": [ "///a/861", "///a/863" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 177.407, "beta": -138.061, "gamma": 148.548, "delta": 80.094, "epsilon": -127.809, "zeta": -53.616, "epsilon_zeta": -74.193, "bb_type": "--", "chi": -161.740, "glyco_bond": "anti", "C5prime_xyz": [ -1.300, 8.769, 0.656 ], "P_xyz": [ 0.822, 9.219, -0.743 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.773, "theta": -117.021, "eta_prime": 176.278, "theta_prime": -119.665, "eta_base": -163.085, "theta_base": -74.818, "v0": 0.404, "v1": -23.051, "v2": 35.737, "v3": -36.447, "v4": 22.721, "amplitude": 37.574, "phase_angle": 17.989, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.010, "filter_rmsd": 0.071, "frame": { "rmsd": 0.016, "origin": [ 269.203, 224.193, 287.651 ], "x_axis": [ 0.993, -0.013, -0.121 ], "y_axis": [ -0.099, 0.492, -0.865 ], "z_axis": [ 0.070, 0.871, 0.487 ], "quaternion": [ 0.862, -0.503, 0.055, 0.025 ] } }, { "index": 862, "index_chain": 862, "chain_name": "a", "nt_resnum": 863, "nt_name": "G", "nt_code": "G", "nt_id": "///a/863", "linked_nts": [ "///a/862", "///a/864" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,helix,multiplet", "alpha": -94.364, "beta": 162.784, "gamma": 89.588, "delta": 81.904, "epsilon": -113.001, "zeta": 161.287, "epsilon_zeta": 85.712, "bb_type": "BII", "chi": -163.309, "glyco_bond": "anti", "C5prime_xyz": [ -1.223, 8.678, 0.691 ], "P_xyz": [ 1.132, 9.142, -0.322 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.698, "theta": 96.211, "eta_prime": -165.451, "theta_prime": 112.838, "eta_base": -96.404, "theta_base": 159.322, "v0": 1.857, "v1": -24.511, "v2": 36.624, "v3": -36.450, "v4": 21.925, "amplitude": 38.072, "phase_angle": 15.853, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 273.847, 227.699, 286.568 ], "x_axis": [ 0.381, 0.337, -0.861 ], "y_axis": [ -0.875, 0.433, -0.217 ], "z_axis": [ 0.300, 0.836, 0.460 ], "quaternion": [ 0.754, -0.349, 0.385, 0.402 ] } }, { "index": 863, "index_chain": 863, "chain_name": "a", "nt_resnum": 864, "nt_name": "A", "nt_code": "A", "nt_id": "///a/864", "linked_nts": [ "///a/863", "///a/865" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn", "alpha": -54.382, "beta": -162.028, "gamma": 47.537, "delta": 140.852, "epsilon": -154.544, "zeta": 122.959, "epsilon_zeta": 82.497, "bb_type": "--", "chi": 42.670, "glyco_bond": "syn", "C5prime_xyz": [ -5.753, 4.332, 0.331 ], "P_xyz": [ -6.701, 2.432, -1.206 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -122.233, "theta": 112.383, "eta_prime": -128.700, "theta_prime": 62.389, "eta_base": 172.816, "theta_base": -14.829, "v0": -28.856, "v1": 40.342, "v2": -35.674, "v3": 19.972, "v4": 5.285, "amplitude": 39.829, "phase_angle": 153.596, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "3b", "suiteness": 0.553, "filter_rmsd": 0.040, "frame": { "rmsd": 0.018, "origin": [ 268.012, 234.036, 296.084 ], "x_axis": [ -0.056, 0.368, 0.928 ], "y_axis": [ -0.741, 0.608, -0.285 ], "z_axis": [ -0.669, -0.704, 0.238 ], "quaternion": [ 0.669, 0.156, -0.597, 0.414 ] } }, { "index": 864, "index_chain": 864, "chain_name": "a", "nt_resnum": 865, "nt_name": "U", "nt_code": "U", "nt_id": "///a/865", "linked_nts": [ "///a/864", "///a/866" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI,non-stack,non-canonical,multiplet", "alpha": 51.003, "beta": -156.047, "gamma": 73.872, "delta": 144.035, "epsilon": -130.406, "zeta": -78.023, "epsilon_zeta": -52.382, "bb_type": "BI", "chi": -104.550, "glyco_bond": "anti", "C5prime_xyz": [ -2.218, 8.156, -2.004 ], "P_xyz": [ 0.262, 8.997, -1.963 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -3.277, "theta": -42.520, "eta_prime": 20.662, "theta_prime": -80.665, "eta_base": 84.830, "theta_base": -40.139, "v0": -23.024, "v1": 35.584, "v2": -33.849, "v3": 21.384, "v4": 0.857, "amplitude": 36.040, "phase_angle": 159.920, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.104, "frame": { "rmsd": 0.014, "origin": [ 262.551, 240.624, 279.889 ], "x_axis": [ 0.904, 0.424, 0.046 ], "y_axis": [ 0.132, -0.380, 0.915 ], "z_axis": [ 0.406, -0.822, -0.400 ], "quaternion": [ 0.530, 0.819, 0.170, 0.138 ] } }, { "index": 865, "index_chain": 865, "chain_name": "a", "nt_resnum": 866, "nt_name": "A", "nt_code": "A", "nt_id": "///a/866", "linked_nts": [ "///a/865", "///a/867" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,non-canonical,helix-end,multiplet", "alpha": 125.171, "beta": 134.344, "gamma": -73.998, "delta": 148.976, "epsilon": -145.148, "zeta": -138.787, "epsilon_zeta": -6.360, "bb_type": "--", "chi": 63.089, "glyco_bond": "syn", "C5prime_xyz": [ -5.269, 4.149, 1.371 ], "P_xyz": [ -7.680, 3.302, 0.802 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -159.173, "theta": -153.056, "eta_prime": -118.246, "theta_prime": 166.012, "eta_base": -122.094, "theta_base": 120.598, "v0": -21.329, "v1": 36.296, "v2": -36.530, "v3": 25.149, "v4": -2.619, "amplitude": 37.796, "phase_angle": 165.128, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.046, "frame": { "rmsd": 0.018, "origin": [ 264.296, 231.061, 293.023 ], "x_axis": [ 0.690, -0.579, 0.435 ], "y_axis": [ -0.037, -0.628, -0.777 ], "z_axis": [ 0.723, 0.520, -0.455 ], "quaternion": [ -0.390, 0.833, -0.185, 0.348 ] } }, { "index": 866, "index_chain": 866, "chain_name": "a", "nt_resnum": 867, "nt_name": "A", "nt_code": "A", "nt_id": "///a/867", "linked_nts": [ "///a/866", "///a/868" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": 102.066, "beta": -151.387, "gamma": 82.325, "delta": 145.791, "epsilon": -96.558, "zeta": -83.659, "epsilon_zeta": -12.899, "bb_type": "--", "chi": -139.317, "glyco_bond": "anti", "C5prime_xyz": [ -1.595, 8.693, -0.175 ], "P_xyz": [ 0.679, 8.921, 1.126 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 43.785, "theta": -56.588, "eta_prime": 64.849, "theta_prime": -80.682, "eta_base": 62.282, "theta_base": -52.447, "v0": -21.285, "v1": 35.359, "v2": -35.154, "v3": 23.739, "v4": -1.783, "amplitude": 36.579, "phase_angle": 163.952, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.044, "frame": { "rmsd": 0.018, "origin": [ 264.880, 224.214, 279.728 ], "x_axis": [ -0.223, 0.716, -0.661 ], "y_axis": [ -0.725, 0.331, 0.603 ], "z_axis": [ 0.651, 0.614, 0.446 ], "quaternion": [ 0.623, -0.004, 0.526, 0.578 ] } }, { "index": 867, "index_chain": 867, "chain_name": "a", "nt_resnum": 868, "nt_name": "G", "nt_code": "G", "nt_id": "///a/868", "linked_nts": [ "///a/867", "///a/869" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -78.141, "beta": -150.376, "gamma": 53.790, "delta": 82.211, "epsilon": -139.108, "zeta": -72.854, "epsilon_zeta": -66.254, "bb_type": "BI", "chi": -165.037, "glyco_bond": "anti", "C5prime_xyz": [ -1.241, 8.633, 0.814 ], "P_xyz": [ 1.146, 8.852, 1.862 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.690, "theta": -138.444, "eta_prime": -156.701, "theta_prime": -132.003, "eta_base": -141.726, "theta_base": -105.162, "v0": 3.077, "v1": -25.101, "v2": 36.423, "v3": -35.631, "v4": 20.543, "amplitude": 37.542, "phase_angle": 14.022, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.788, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 260.860, 230.010, 295.062 ], "x_axis": [ -0.751, 0.343, -0.564 ], "y_axis": [ 0.224, -0.672, -0.706 ], "z_axis": [ -0.621, -0.657, 0.428 ], "quaternion": [ 0.035, -0.351, -0.404, 0.844 ] } }, { "index": 868, "index_chain": 868, "chain_name": "a", "nt_resnum": 869, "nt_name": "U", "nt_code": "U", "nt_id": "///a/869", "linked_nts": [ "///a/868", "///a/870" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -68.370, "beta": 178.932, "gamma": 54.106, "delta": 81.226, "epsilon": -146.639, "zeta": -68.944, "epsilon_zeta": -77.696, "bb_type": "BI", "chi": -148.934, "glyco_bond": "anti", "C5prime_xyz": [ -1.684, 8.757, -0.126 ], "P_xyz": [ 0.820, 9.439, -0.123 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.315, "theta": -109.715, "eta_prime": -178.461, "theta_prime": -123.819, "eta_base": -142.206, "theta_base": -107.751, "v0": -0.139, "v1": -22.807, "v2": 35.808, "v3": -36.807, "v4": 23.327, "amplitude": 37.821, "phase_angle": 18.776, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.942, "filter_rmsd": 0.103, "frame": { "rmsd": 0.015, "origin": [ 257.521, 229.363, 296.438 ], "x_axis": [ -0.346, 0.067, -0.936 ], "y_axis": [ 0.454, -0.861, -0.230 ], "z_axis": [ -0.821, -0.505, 0.267 ], "quaternion": [ -0.123, -0.558, -0.234, 0.786 ] } }, { "index": 869, "index_chain": 869, "chain_name": "a", "nt_resnum": 870, "nt_name": "C", "nt_code": "C", "nt_id": "///a/870", "linked_nts": [ "///a/869", "///a/871" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 122.186, "beta": -169.261, "gamma": -150.993, "delta": 79.119, "epsilon": -156.999, "zeta": -86.206, "epsilon_zeta": -70.793, "bb_type": "BI", "chi": -157.115, "glyco_bond": "anti", "C5prime_xyz": [ -1.449, 8.818, 0.319 ], "P_xyz": [ -0.982, 10.981, -1.078 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.321, "theta": -175.407, "eta_prime": 174.335, "theta_prime": -173.103, "eta_base": -150.051, "theta_base": -152.189, "v0": 0.870, "v1": -24.415, "v2": 37.363, "v3": -37.845, "v4": 23.345, "amplitude": 39.142, "phase_angle": 17.341, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.010, "filter_rmsd": 0.068, "frame": { "rmsd": 0.011, "origin": [ 253.385, 229.549, 295.111 ], "x_axis": [ 0.160, -0.126, -0.979 ], "y_axis": [ 0.413, -0.892, 0.182 ], "z_axis": [ -0.897, -0.434, -0.091 ], "quaternion": [ 0.210, 0.732, 0.098, -0.641 ] } }, { "index": 870, "index_chain": 870, "chain_name": "a", "nt_resnum": 871, "nt_name": "G", "nt_code": "G", "nt_id": "///a/871", "linked_nts": [ "///a/870", "///a/872" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 152.543, "beta": -155.307, "gamma": 176.540, "delta": 78.777, "epsilon": -116.960, "zeta": -89.889, "epsilon_zeta": -27.071, "bb_type": "--", "chi": -170.935, "glyco_bond": "anti", "C5prime_xyz": [ -1.273, 8.504, 1.188 ], "P_xyz": [ 0.209, 10.110, -0.213 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.969, "theta": -161.076, "eta_prime": 174.669, "theta_prime": -156.173, "eta_base": -155.205, "theta_base": -132.459, "v0": 5.784, "v1": -28.965, "v2": 40.060, "v3": -37.753, "v4": 20.137, "amplitude": 40.760, "phase_angle": 10.631, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.729, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 249.659, 229.800, 293.565 ], "x_axis": [ 0.386, -0.428, -0.817 ], "y_axis": [ 0.213, -0.820, 0.531 ], "z_axis": [ -0.897, -0.379, -0.226 ], "quaternion": [ 0.292, 0.780, -0.069, -0.550 ] } }, { "index": 871, "index_chain": 871, "chain_name": "a", "nt_resnum": 872, "nt_name": "A", "nt_code": "A", "nt_id": "///a/872", "linked_nts": [ "///a/871", "///a/873" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -50.716, "beta": 173.589, "gamma": 36.511, "delta": 80.491, "epsilon": -146.773, "zeta": -74.740, "epsilon_zeta": -72.033, "bb_type": "BI", "chi": -148.478, "glyco_bond": "anti", "C5prime_xyz": [ -1.506, 8.685, -0.209 ], "P_xyz": [ 1.000, 9.365, -0.115 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.152, "theta": -150.067, "eta_prime": 172.338, "theta_prime": -147.295, "eta_base": -156.494, "theta_base": -126.325, "v0": 2.539, "v1": -25.599, "v2": 37.468, "v3": -37.078, "v4": 21.772, "amplitude": 38.774, "phase_angle": 14.914, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.232, "filter_rmsd": 0.041, "frame": { "rmsd": 0.019, "origin": [ 247.038, 229.182, 290.912 ], "x_axis": [ 0.741, -0.620, -0.260 ], "y_axis": [ -0.188, -0.562, 0.805 ], "z_axis": [ -0.645, -0.548, -0.533 ], "quaternion": [ 0.402, 0.842, -0.240, -0.269 ] } }, { "index": 872, "index_chain": 872, "chain_name": "a", "nt_resnum": 873, "nt_name": "C", "nt_code": "C", "nt_id": "///a/873", "linked_nts": [ "///a/872", "///a/874" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -84.213, "beta": 165.703, "gamma": 75.348, "delta": 80.193, "epsilon": -150.402, "zeta": -70.611, "epsilon_zeta": -79.791, "bb_type": "BI", "chi": -148.751, "glyco_bond": "anti", "C5prime_xyz": [ -1.639, 8.778, -0.193 ], "P_xyz": [ 0.703, 9.232, -1.211 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.900, "theta": -144.987, "eta_prime": 176.835, "theta_prime": -148.723, "eta_base": -150.812, "theta_base": -131.619, "v0": 0.268, "v1": -23.973, "v2": 37.094, "v3": -37.989, "v4": 23.724, "amplitude": 39.041, "phase_angle": 18.172, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.246, "filter_rmsd": 0.072, "frame": { "rmsd": 0.023, "origin": [ 246.104, 227.529, 288.465 ], "x_axis": [ 0.708, -0.671, 0.220 ], "y_axis": [ -0.610, -0.426, 0.668 ], "z_axis": [ -0.355, -0.607, -0.711 ], "quaternion": [ 0.378, 0.843, -0.380, -0.040 ] } }, { "index": 873, "index_chain": 873, "chain_name": "a", "nt_resnum": 874, "nt_name": "C", "nt_code": "C", "nt_id": "///a/874", "linked_nts": [ "///a/873", "///a/875" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix", "alpha": -77.197, "beta": 169.747, "gamma": 76.439, "delta": 75.996, "epsilon": -149.411, "zeta": -75.303, "epsilon_zeta": -74.108, "bb_type": "BI", "chi": -150.528, "glyco_bond": "anti", "C5prime_xyz": [ -1.782, 8.917, -0.095 ], "P_xyz": [ 0.560, 9.695, -0.908 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.861, "theta": -152.788, "eta_prime": -174.656, "theta_prime": -152.877, "eta_base": -143.551, "theta_base": -122.086, "v0": -4.230, "v1": -20.846, "v2": 36.550, "v3": -39.917, "v4": 27.836, "amplitude": 40.150, "phase_angle": 24.446, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.246, "filter_rmsd": 0.068, "frame": { "rmsd": 0.019, "origin": [ 246.502, 224.804, 285.344 ], "x_axis": [ 0.409, -0.698, 0.588 ], "y_axis": [ -0.894, -0.178, 0.411 ], "z_axis": [ -0.182, -0.693, -0.697 ], "quaternion": [ 0.365, 0.756, -0.527, 0.134 ] } }, { "index": 874, "index_chain": 874, "chain_name": "a", "nt_resnum": 875, "nt_name": "G", "nt_code": "G", "nt_id": "///a/875", "linked_nts": [ "///a/874", "///a/876" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -65.195, "beta": 171.881, "gamma": 57.860, "delta": 79.123, "epsilon": -138.098, "zeta": -72.010, "epsilon_zeta": -66.088, "bb_type": "BI", "chi": -165.570, "glyco_bond": "anti", "C5prime_xyz": [ -1.305, 8.688, 0.846 ], "P_xyz": [ 1.266, 9.090, 0.928 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.028, "theta": -137.756, "eta_prime": -178.021, "theta_prime": -133.351, "eta_base": -135.244, "theta_base": -87.147, "v0": 3.132, "v1": -26.918, "v2": 39.216, "v3": -38.306, "v4": 22.217, "amplitude": 40.446, "phase_angle": 14.170, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.888, "filter_rmsd": 0.022, "frame": { "rmsd": 0.022, "origin": [ 246.647, 220.379, 283.238 ], "x_axis": [ -0.136, -0.423, 0.896 ], "y_axis": [ -0.932, 0.360, 0.029 ], "z_axis": [ -0.335, -0.832, -0.443 ], "quaternion": [ -0.442, -0.487, 0.696, -0.288 ] } }, { "index": 875, "index_chain": 875, "chain_name": "a", "nt_resnum": 876, "nt_name": "C", "nt_code": "C", "nt_id": "///a/876", "linked_nts": [ "///a/875", "///a/877" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -68.344, "beta": 158.986, "gamma": 74.460, "delta": 81.627, "epsilon": -150.810, "zeta": -82.611, "epsilon_zeta": -68.199, "bb_type": "BI", "chi": -143.429, "glyco_bond": "anti", "C5prime_xyz": [ -1.611, 8.758, -0.476 ], "P_xyz": [ 0.685, 8.961, -1.724 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.602, "theta": -153.551, "eta_prime": -167.320, "theta_prime": -157.208, "eta_base": -103.957, "theta_base": -144.300, "v0": 1.974, "v1": -24.672, "v2": 36.755, "v3": -36.435, "v4": 21.814, "amplitude": 38.162, "phase_angle": 15.609, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.329, "filter_rmsd": 0.070, "frame": { "rmsd": 0.018, "origin": [ 245.808, 217.334, 284.433 ], "x_axis": [ -0.713, -0.326, 0.621 ], "y_axis": [ -0.690, 0.167, -0.705 ], "z_axis": [ 0.127, -0.931, -0.344 ], "quaternion": [ -0.166, -0.341, 0.746, -0.548 ] } }, { "index": 876, "index_chain": 876, "chain_name": "a", "nt_resnum": 877, "nt_name": "C", "nt_code": "C", "nt_id": "///a/877", "linked_nts": [ "///a/876", "///a/878" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -54.384, "beta": -175.398, "gamma": 44.349, "delta": 80.736, "epsilon": -141.809, "zeta": -87.239, "epsilon_zeta": -54.570, "bb_type": "BI", "chi": -163.311, "glyco_bond": "anti", "C5prime_xyz": [ -1.347, 8.803, 0.719 ], "P_xyz": [ 1.012, 9.320, 1.727 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -179.096, "theta": -155.790, "eta_prime": -177.202, "theta_prime": -144.834, "eta_base": -158.920, "theta_base": -165.332, "v0": -1.995, "v1": -20.919, "v2": 34.607, "v3": -36.711, "v4": 24.436, "amplitude": 37.227, "phase_angle": 21.625, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.736, "filter_rmsd": 0.068, "frame": { "rmsd": 0.018, "origin": [ 246.543, 211.545, 283.375 ], "x_axis": [ -0.775, 0.361, 0.519 ], "y_axis": [ -0.267, 0.558, -0.786 ], "z_axis": [ -0.573, -0.747, -0.336 ], "quaternion": [ -0.334, 0.029, 0.817, -0.469 ] } }, { "index": 877, "index_chain": 877, "chain_name": "a", "nt_resnum": 878, "nt_name": "U", "nt_code": "U", "nt_id": "///a/878", "linked_nts": [ "///a/877", "///a/879" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -50.625, "beta": 172.540, "gamma": 51.611, "delta": 141.107, "epsilon": -129.095, "zeta": 120.242, "epsilon_zeta": 110.662, "bb_type": "--", "chi": -103.632, "glyco_bond": "anti", "C5prime_xyz": [ -2.374, 8.122, -2.056 ], "P_xyz": [ -0.002, 9.125, -2.352 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -174.353, "theta": 126.208, "eta_prime": -153.136, "theta_prime": 109.092, "eta_base": -175.675, "theta_base": 148.050, "v0": -24.719, "v1": 35.801, "v2": -32.585, "v3": 19.195, "v4": 3.309, "amplitude": 35.667, "phase_angle": 156.008, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.731, "filter_rmsd": 0.101, "frame": { "rmsd": 0.018, "origin": [ 247.159, 209.038, 283.129 ], "x_axis": [ -0.728, 0.573, 0.376 ], "y_axis": [ -0.431, 0.043, -0.901 ], "z_axis": [ -0.532, -0.819, 0.215 ], "quaternion": [ 0.364, -0.057, -0.624, 0.689 ] } }, { "index": 878, "index_chain": 878, "chain_name": "a", "nt_resnum": 879, "nt_name": "G", "nt_code": "G", "nt_id": "///a/879", "linked_nts": [ "///a/878", "///a/880" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix-end,stem-end,multiplet", "alpha": 3.504, "beta": 170.146, "gamma": 63.539, "delta": 81.145, "epsilon": -146.922, "zeta": -70.119, "epsilon_zeta": -76.803, "bb_type": "BI", "chi": -179.688, "glyco_bond": "anti", "C5prime_xyz": [ -1.380, 8.393, 1.650 ], "P_xyz": [ 1.185, 8.607, 2.009 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -74.496, "theta": -140.886, "eta_prime": -82.998, "theta_prime": -141.399, "eta_base": -101.113, "theta_base": -130.304, "v0": 4.703, "v1": -27.854, "v2": 39.130, "v3": -37.329, "v4": 20.608, "amplitude": 39.990, "phase_angle": 11.901, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 248.780, 199.927, 266.897 ], "x_axis": [ -0.882, -0.426, 0.203 ], "y_axis": [ -0.027, 0.475, 0.879 ], "z_axis": [ -0.471, 0.770, -0.431 ], "quaternion": [ -0.202, -0.136, 0.835, 0.494 ] } }, { "index": 879, "index_chain": 879, "chain_name": "a", "nt_resnum": 880, "nt_name": "G", "nt_code": "G", "nt_id": "///a/880", "linked_nts": [ "///a/879", "///a/881" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -66.582, "beta": -178.179, "gamma": 57.598, "delta": 76.846, "epsilon": -151.741, "zeta": -77.293, "epsilon_zeta": -74.448, "bb_type": "BI", "chi": -158.236, "glyco_bond": "anti", "C5prime_xyz": [ -1.604, 8.853, 0.374 ], "P_xyz": [ 0.878, 9.656, 0.521 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.492, "theta": -123.124, "eta_prime": -174.133, "theta_prime": -130.180, "eta_base": -148.952, "theta_base": -97.873, "v0": -1.571, "v1": -22.682, "v2": 37.129, "v3": -38.963, "v4": 25.626, "amplitude": 39.726, "phase_angle": 20.831, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.918, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 247.315, 200.786, 263.127 ], "x_axis": [ -0.854, -0.074, 0.514 ], "y_axis": [ 0.325, 0.696, 0.640 ], "z_axis": [ -0.406, 0.714, -0.571 ], "quaternion": [ -0.260, 0.071, 0.883, 0.383 ] } }, { "index": 880, "index_chain": 880, "chain_name": "a", "nt_resnum": 881, "nt_name": "G", "nt_code": "G", "nt_id": "///a/881", "linked_nts": [ "///a/880", "///a/882" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 136.497, "beta": -153.347, "gamma": -167.121, "delta": 81.055, "epsilon": -121.642, "zeta": -48.900, "epsilon_zeta": -72.743, "bb_type": "--", "chi": -177.489, "glyco_bond": "anti", "C5prime_xyz": [ -1.201, 8.431, 1.569 ], "P_xyz": [ 0.231, 10.365, 0.548 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.757, "theta": -134.386, "eta_prime": -176.979, "theta_prime": -127.071, "eta_base": -124.235, "theta_base": -70.709, "v0": 4.091, "v1": -26.487, "v2": 37.695, "v3": -36.283, "v4": 20.322, "amplitude": 38.632, "phase_angle": 12.645, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.517, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 243.060, 201.880, 262.303 ], "x_axis": [ -0.404, 0.221, 0.888 ], "y_axis": [ 0.728, 0.665, 0.166 ], "z_axis": [ -0.554, 0.713, -0.429 ], "quaternion": [ -0.456, 0.300, 0.790, 0.278 ] } }, { "index": 881, "index_chain": 881, "chain_name": "a", "nt_resnum": 882, "nt_name": "G", "nt_code": "G", "nt_id": "///a/882", "linked_nts": [ "///a/881", "///a/883" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -78.884, "beta": 166.975, "gamma": 68.283, "delta": 75.757, "epsilon": -124.624, "zeta": 9.934, "epsilon_zeta": 225.442, "bb_type": "--", "chi": -162.894, "glyco_bond": "anti", "C5prime_xyz": [ -1.493, 8.839, 0.633 ], "P_xyz": [ 0.981, 9.526, 0.256 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.045, "theta": -36.970, "eta_prime": -171.643, "theta_prime": -73.657, "eta_base": -93.434, "theta_base": -112.939, "v0": -0.794, "v1": -24.319, "v2": 38.876, "v3": -40.377, "v4": 26.027, "amplitude": 41.297, "phase_angle": 19.716, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.299, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 240.937, 205.849, 265.755 ], "x_axis": [ 0.477, 0.684, 0.552 ], "y_axis": [ 0.562, 0.246, -0.790 ], "z_axis": [ -0.676, 0.687, -0.267 ], "quaternion": [ 0.603, -0.612, -0.509, 0.051 ] } }, { "index": 882, "index_chain": 882, "chain_name": "a", "nt_resnum": 883, "nt_name": "A", "nt_code": "A", "nt_id": "///a/883", "linked_nts": [ "///a/882", "///a/884" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": 164.491, "beta": 165.623, "gamma": 56.311, "delta": 145.071, "epsilon": -35.284, "zeta": 88.563, "epsilon_zeta": 236.153, "bb_type": "--", "chi": -139.722, "glyco_bond": "anti", "C5prime_xyz": [ -1.926, 8.756, -0.206 ], "P_xyz": [ 0.357, 9.459, 0.848 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 70.311, "theta": 146.838, "eta_prime": 125.000, "theta_prime": 134.236, "eta_base": 118.216, "theta_base": 158.603, "v0": -24.542, "v1": 38.039, "v2": -36.087, "v3": 22.921, "v4": 0.784, "amplitude": 38.406, "phase_angle": 159.991, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.042, "frame": { "rmsd": 0.015, "origin": [ 239.309, 208.885, 266.542 ], "x_axis": [ -0.705, -0.682, -0.194 ], "y_axis": [ 0.159, 0.115, -0.981 ], "z_axis": [ 0.691, -0.722, 0.027 ], "quaternion": [ 0.331, -0.195, 0.670, -0.636 ] } }, { "index": 883, "index_chain": 883, "chain_name": "a", "nt_resnum": 884, "nt_name": "G", "nt_code": "G", "nt_id": "///a/884", "linked_nts": [ "///a/883", "///a/885" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,non-stack,non-canonical,multiplet", "alpha": 173.002, "beta": 167.921, "gamma": 178.452, "delta": 149.267, "epsilon": -101.466, "zeta": 100.429, "epsilon_zeta": 158.106, "bb_type": "--", "chi": -86.389, "glyco_bond": "--", "C5prime_xyz": [ -3.102, 7.682, -2.464 ], "P_xyz": [ -3.062, 7.646, -5.103 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -73.863, "theta": 44.304, "eta_prime": -104.404, "theta_prime": 55.672, "eta_base": -109.320, "theta_base": 82.111, "v0": -27.411, "v1": 41.395, "v2": -38.368, "v3": 23.668, "v4": 2.137, "amplitude": 41.328, "phase_angle": 158.182, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 240.143, 214.112, 269.200 ], "x_axis": [ 0.684, 0.264, 0.681 ], "y_axis": [ 0.429, 0.609, -0.667 ], "z_axis": [ -0.590, 0.748, 0.303 ], "quaternion": [ 0.806, -0.439, -0.394, -0.051 ] } }, { "index": 884, "index_chain": 884, "chain_name": "a", "nt_resnum": 885, "nt_name": "U", "nt_code": "U", "nt_id": "///a/885", "linked_nts": [ "///a/884", "///a/886" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -99.372, "beta": 173.031, "gamma": 31.714, "delta": 77.481, "epsilon": -149.868, "zeta": -75.389, "epsilon_zeta": -74.479, "bb_type": "BI", "chi": -164.941, "glyco_bond": "anti", "C5prime_xyz": [ -1.578, 8.763, 0.759 ], "P_xyz": [ 0.749, 9.528, 1.656 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.372, "theta": -155.833, "eta_prime": 150.269, "theta_prime": -149.170, "eta_base": 162.705, "theta_base": -123.758, "v0": -1.046, "v1": -23.249, "v2": 37.323, "v3": -38.852, "v4": 25.151, "amplitude": 39.718, "phase_angle": 19.996, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.013, "filter_rmsd": 0.102, "frame": { "rmsd": 0.015, "origin": [ 236.226, 209.452, 263.319 ], "x_axis": [ -0.002, 0.404, 0.915 ], "y_axis": [ 0.432, 0.825, -0.364 ], "z_axis": [ -0.902, 0.394, -0.176 ], "quaternion": [ 0.642, -0.295, -0.708, -0.011 ] } }, { "index": 885, "index_chain": 885, "chain_name": "a", "nt_resnum": 886, "nt_name": "A", "nt_code": "A", "nt_id": "///a/886", "linked_nts": [ "///a/885", "///a/887" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -65.291, "beta": 175.393, "gamma": 66.383, "delta": 78.991, "epsilon": -153.896, "zeta": -76.147, "epsilon_zeta": -77.749, "bb_type": "BI", "chi": -162.575, "glyco_bond": "anti", "C5prime_xyz": [ -1.420, 8.736, 0.605 ], "P_xyz": [ 1.116, 9.316, 0.515 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 179.639, "theta": -123.211, "eta_prime": -169.007, "theta_prime": -129.391, "eta_base": -137.642, "theta_base": -84.289, "v0": -0.671, "v1": -22.717, "v2": 36.179, "v3": -37.487, "v4": 24.111, "amplitude": 38.393, "phase_angle": 19.556, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.690, "filter_rmsd": 0.040, "frame": { "rmsd": 0.013, "origin": [ 231.286, 210.113, 263.774 ], "x_axis": [ 0.208, 0.764, 0.611 ], "y_axis": [ 0.439, 0.485, -0.756 ], "z_axis": [ -0.874, 0.426, -0.234 ], "quaternion": [ 0.604, -0.489, -0.615, 0.134 ] } }, { "index": 886, "index_chain": 886, "chain_name": "a", "nt_resnum": 887, "nt_name": "C", "nt_code": "C", "nt_id": "///a/887", "linked_nts": [ "///a/886", "///a/888" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": 176.381, "beta": -152.292, "gamma": 143.015, "delta": 77.200, "epsilon": -118.675, "zeta": -82.510, "epsilon_zeta": -36.165, "bb_type": "--", "chi": -162.123, "glyco_bond": "anti", "C5prime_xyz": [ -1.298, 8.726, 0.681 ], "P_xyz": [ 0.752, 9.403, -0.781 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 150.028, "theta": -139.622, "eta_prime": 172.850, "theta_prime": -141.420, "eta_base": -121.438, "theta_base": -105.918, "v0": 3.863, "v1": -27.286, "v2": 39.307, "v3": -38.078, "v4": 21.453, "amplitude": 40.375, "phase_angle": 13.204, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.071, "frame": { "rmsd": 0.015, "origin": [ 229.821, 213.155, 265.103 ], "x_axis": [ 0.570, 0.819, -0.067 ], "y_axis": [ -0.104, -0.009, -0.995 ], "z_axis": [ -0.815, 0.574, 0.080 ], "quaternion": [ 0.641, -0.612, -0.292, 0.360 ] } }, { "index": 887, "index_chain": 887, "chain_name": "a", "nt_resnum": 888, "nt_name": "G", "nt_code": "G", "nt_id": "///a/888", "linked_nts": [ "///a/887", "///a/889" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -51.983, "beta": 162.322, "gamma": 46.579, "delta": 75.877, "epsilon": -145.153, "zeta": -66.361, "epsilon_zeta": -78.793, "bb_type": "BI", "chi": -172.605, "glyco_bond": "anti", "C5prime_xyz": [ -1.382, 8.596, 1.231 ], "P_xyz": [ 1.152, 9.012, 1.540 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.728, "theta": -141.070, "eta_prime": 174.268, "theta_prime": -139.994, "eta_base": -129.576, "theta_base": -114.423, "v0": 3.782, "v1": -28.444, "v2": 40.984, "v3": -39.827, "v4": 22.714, "amplitude": 42.151, "phase_angle": 13.514, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.428, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 228.702, 217.640, 265.145 ], "x_axis": [ 0.675, 0.224, -0.703 ], "y_axis": [ -0.483, -0.587, -0.650 ], "z_axis": [ -0.558, 0.778, -0.288 ], "quaternion": [ -0.447, 0.798, -0.081, -0.395 ] } }, { "index": 888, "index_chain": 888, "chain_name": "a", "nt_resnum": 889, "nt_name": "G", "nt_code": "G", "nt_id": "///a/889", "linked_nts": [ "///a/888", "///a/890" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -71.660, "beta": 174.089, "gamma": 66.403, "delta": 75.971, "epsilon": -139.338, "zeta": -80.505, "epsilon_zeta": -58.833, "bb_type": "BI", "chi": -166.179, "glyco_bond": "anti", "C5prime_xyz": [ -1.588, 8.804, 0.809 ], "P_xyz": [ 0.902, 9.591, 0.752 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.448, "theta": -149.758, "eta_prime": -174.711, "theta_prime": -146.513, "eta_base": -133.861, "theta_base": -115.666, "v0": -1.132, "v1": -23.525, "v2": 37.912, "v3": -39.600, "v4": 25.663, "amplitude": 40.390, "phase_angle": 20.174, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.647, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 229.277, 221.311, 264.630 ], "x_axis": [ 0.317, -0.143, -0.937 ], "y_axis": [ -0.837, -0.507, -0.205 ], "z_axis": [ -0.446, 0.850, -0.281 ], "quaternion": [ -0.364, 0.725, -0.338, -0.477 ] } }, { "index": 889, "index_chain": 889, "chain_name": "a", "nt_resnum": 890, "nt_name": "C", "nt_code": "C", "nt_id": "///a/890", "linked_nts": [ "///a/889", "///a/891" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -56.538, "beta": 160.323, "gamma": 59.779, "delta": 78.580, "epsilon": -157.810, "zeta": -81.041, "epsilon_zeta": -76.769, "bb_type": "BI", "chi": -153.167, "glyco_bond": "anti", "C5prime_xyz": [ -1.612, 8.870, 0.079 ], "P_xyz": [ 0.893, 9.423, -0.398 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.076, "theta": -125.371, "eta_prime": -174.110, "theta_prime": -134.937, "eta_base": -130.150, "theta_base": -104.971, "v0": -1.700, "v1": -21.927, "v2": 35.851, "v3": -37.764, "v4": 24.901, "amplitude": 38.411, "phase_angle": 21.038, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.763, "filter_rmsd": 0.065, "frame": { "rmsd": 0.012, "origin": [ 229.535, 224.100, 262.712 ], "x_axis": [ -0.174, -0.398, -0.901 ], "y_axis": [ -0.956, -0.151, 0.251 ], "z_axis": [ -0.236, 0.905, -0.355 ], "quaternion": [ 0.283, -0.577, 0.587, 0.493 ] } }, { "index": 890, "index_chain": 890, "chain_name": "a", "nt_resnum": 891, "nt_name": "C", "nt_code": "C", "nt_id": "///a/891", "linked_nts": [ "///a/890", "///a/892" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 162.370, "beta": -149.499, "gamma": 161.919, "delta": 77.672, "epsilon": -126.817, "zeta": -67.984, "epsilon_zeta": -58.833, "bb_type": "BI", "chi": -162.420, "glyco_bond": "anti", "C5prime_xyz": [ -1.459, 8.792, 0.651 ], "P_xyz": [ 0.230, 9.876, -0.999 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.415, "theta": -139.472, "eta_prime": 175.743, "theta_prime": -140.636, "eta_base": -134.479, "theta_base": -107.749, "v0": 0.191, "v1": -24.138, "v2": 37.747, "v3": -38.573, "v4": 24.157, "amplitude": 39.756, "phase_angle": 18.291, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.436, "filter_rmsd": 0.064, "frame": { "rmsd": 0.013, "origin": [ 229.268, 225.731, 259.434 ], "x_axis": [ -0.635, -0.554, -0.539 ], "y_axis": [ -0.757, 0.308, 0.576 ], "z_axis": [ -0.153, 0.773, -0.615 ], "quaternion": [ 0.121, -0.410, 0.800, 0.422 ] } }, { "index": 891, "index_chain": 891, "chain_name": "a", "nt_resnum": 892, "nt_name": "G", "nt_code": "G", "nt_id": "///a/892", "linked_nts": [ "///a/891", "///a/893" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -60.984, "beta": 179.781, "gamma": 44.576, "delta": 76.217, "epsilon": -141.819, "zeta": -64.242, "epsilon_zeta": -77.577, "bb_type": "BI", "chi": -146.809, "glyco_bond": "anti", "C5prime_xyz": [ -1.707, 8.870, -0.338 ], "P_xyz": [ 0.700, 9.882, -0.329 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.898, "theta": -116.414, "eta_prime": 177.557, "theta_prime": -157.243, "eta_base": -134.953, "theta_base": 152.313, "v0": -4.292, "v1": -20.552, "v2": 36.197, "v3": -39.740, "v4": 27.781, "amplitude": 39.845, "phase_angle": 24.709, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.641, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 227.148, 226.132, 255.595 ], "x_axis": [ -0.844, -0.481, 0.236 ], "y_axis": [ -0.232, 0.725, 0.649 ], "z_axis": [ -0.483, 0.493, -0.724 ], "quaternion": [ -0.198, -0.196, 0.907, 0.315 ] } }, { "index": 892, "index_chain": 892, "chain_name": "a", "nt_resnum": 893, "nt_name": "C", "nt_code": "C", "nt_id": "///a/893", "linked_nts": [ "///a/892", "///a/894" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": 151.742, "beta": 158.125, "gamma": 51.746, "delta": 75.703, "epsilon": 134.618, "zeta": 50.292, "epsilon_zeta": 84.325, "bb_type": "--", "chi": -159.596, "glyco_bond": "anti", "C5prime_xyz": [ -1.224, 8.724, 0.542 ], "P_xyz": [ 1.393, 8.788, 0.518 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 5.834, "theta": -96.450, "eta_prime": 41.322, "theta_prime": -113.196, "eta_base": 30.646, "theta_base": -72.477, "v0": 4.345, "v1": -26.205, "v2": 36.883, "v3": -35.405, "v4": 19.733, "amplitude": 37.739, "phase_angle": 12.222, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.620, "filter_rmsd": 0.069, "frame": { "rmsd": 0.014, "origin": [ 230.700, 237.199, 251.023 ], "x_axis": [ 0.507, 0.406, 0.761 ], "y_axis": [ -0.736, -0.256, 0.627 ], "z_axis": [ 0.450, -0.877, 0.169 ], "quaternion": [ 0.596, 0.631, -0.131, 0.479 ] } }, { "index": 893, "index_chain": 893, "chain_name": "a", "nt_resnum": 894, "nt_name": "A", "nt_code": "A", "nt_id": "///a/894", "linked_nts": [ "///a/893", "///a/895" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -172.189, "beta": 151.007, "gamma": 105.401, "delta": 85.837, "epsilon": -124.558, "zeta": -86.794, "epsilon_zeta": -37.764, "bb_type": "--", "chi": -166.344, "glyco_bond": "anti", "C5prime_xyz": [ -1.435, 8.629, 0.920 ], "P_xyz": [ 0.735, 9.450, -0.260 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 149.630, "theta": -148.637, "eta_prime": -176.532, "theta_prime": -149.457, "eta_base": -108.847, "theta_base": -108.549, "v0": -0.761, "v1": -19.592, "v2": 31.245, "v3": -32.562, "v4": 21.097, "amplitude": 33.231, "phase_angle": 19.909, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.017, "origin": [ 233.194, 234.645, 254.854 ], "x_axis": [ -0.365, 0.109, 0.925 ], "y_axis": [ -0.824, -0.500, -0.266 ], "z_axis": [ 0.433, -0.859, 0.273 ], "quaternion": [ 0.319, 0.464, -0.385, 0.731 ] } }, { "index": 894, "index_chain": 894, "chain_name": "a", "nt_resnum": 895, "nt_name": "A", "nt_code": "A", "nt_id": "///a/895", "linked_nts": [ "///a/894", "///a/896" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -65.333, "beta": 147.328, "gamma": 64.186, "delta": 81.476, "epsilon": -109.261, "zeta": -30.771, "epsilon_zeta": -78.489, "bb_type": "--", "chi": -154.817, "glyco_bond": "anti", "C5prime_xyz": [ -1.338, 8.722, 0.197 ], "P_xyz": [ 1.133, 8.839, -0.657 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.466, "theta": -87.257, "eta_prime": -176.187, "theta_prime": -85.561, "eta_base": -122.568, "theta_base": -65.120, "v0": 2.303, "v1": -24.673, "v2": 36.432, "v3": -36.016, "v4": 21.297, "amplitude": 37.741, "phase_angle": 15.140, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.419, "filter_rmsd": 0.041, "frame": { "rmsd": 0.014, "origin": [ 233.996, 232.056, 257.032 ], "x_axis": [ -0.791, -0.271, 0.549 ], "y_axis": [ -0.296, -0.615, -0.731 ], "z_axis": [ 0.536, -0.740, 0.406 ], "quaternion": [ 0.007, 0.323, -0.439, 0.838 ] } }, { "index": 895, "index_chain": 895, "chain_name": "a", "nt_resnum": 896, "nt_name": "G", "nt_code": "G", "nt_id": "///a/896", "linked_nts": [ "///a/895", "///a/897" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -101.568, "beta": 122.513, "gamma": 148.356, "delta": 82.449, "epsilon": -140.556, "zeta": -73.122, "epsilon_zeta": -67.433, "bb_type": "BI", "chi": -172.237, "glyco_bond": "anti", "C5prime_xyz": [ -1.156, 8.528, 1.255 ], "P_xyz": [ -0.392, 10.431, -0.375 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -169.488, "theta": 178.314, "eta_prime": -137.310, "theta_prime": -173.082, "eta_base": -82.257, "theta_base": -141.701, "v0": 3.702, "v1": -25.082, "v2": 35.745, "v3": -34.540, "v4": 19.479, "amplitude": 36.673, "phase_angle": 12.919, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 229.149, 226.198, 259.567 ], "x_axis": [ -0.624, -0.728, -0.283 ], "y_axis": [ 0.591, -0.203, -0.781 ], "z_axis": [ 0.511, -0.655, 0.557 ], "quaternion": [ -0.427, 0.074, -0.465, 0.772 ] } }, { "index": 896, "index_chain": 896, "chain_name": "a", "nt_resnum": 897, "nt_name": "G", "nt_code": "G", "nt_id": "///a/897", "linked_nts": [ "///a/896", "///a/898" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -75.296, "beta": 159.772, "gamma": 74.199, "delta": 79.470, "epsilon": -131.563, "zeta": -80.115, "epsilon_zeta": -51.449, "bb_type": "BI", "chi": -171.737, "glyco_bond": "anti", "C5prime_xyz": [ -1.381, 8.628, 1.192 ], "P_xyz": [ 1.140, 9.162, 0.813 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.134, "theta": -141.030, "eta_prime": -174.841, "theta_prime": -139.938, "eta_base": -132.473, "theta_base": -101.769, "v0": 2.197, "v1": -25.126, "v2": 37.317, "v3": -36.981, "v4": 22.013, "amplitude": 38.710, "phase_angle": 15.417, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.334, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 229.324, 223.773, 262.343 ], "x_axis": [ -0.184, -0.763, -0.619 ], "y_axis": [ 0.862, 0.178, -0.475 ], "z_axis": [ 0.473, -0.621, 0.625 ], "quaternion": [ 0.636, 0.057, 0.429, -0.638 ] } }, { "index": 897, "index_chain": 897, "chain_name": "a", "nt_resnum": 898, "nt_name": "U", "nt_code": "U", "nt_id": "///a/898", "linked_nts": [ "///a/897", "///a/899" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -68.664, "beta": 160.647, "gamma": 65.402, "delta": 83.420, "epsilon": -145.439, "zeta": -67.503, "epsilon_zeta": -77.935, "bb_type": "BI", "chi": -148.749, "glyco_bond": "anti", "C5prime_xyz": [ -1.579, 8.718, -0.153 ], "P_xyz": [ 0.929, 9.006, -0.864 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.337, "theta": -133.423, "eta_prime": -176.861, "theta_prime": -137.678, "eta_base": -122.627, "theta_base": -114.628, "v0": 0.518, "v1": -21.980, "v2": 33.797, "v3": -34.421, "v4": 21.461, "amplitude": 35.495, "phase_angle": 17.794, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.633, "filter_rmsd": 0.108, "frame": { "rmsd": 0.015, "origin": [ 229.530, 221.059, 263.055 ], "x_axis": [ 0.377, -0.519, -0.767 ], "y_axis": [ 0.914, 0.342, 0.217 ], "z_axis": [ 0.150, -0.783, 0.604 ], "quaternion": [ 0.762, 0.328, 0.301, -0.470 ] } }, { "index": 898, "index_chain": 898, "chain_name": "a", "nt_resnum": 899, "nt_name": "U", "nt_code": "U", "nt_id": "///a/899", "linked_nts": [ "///a/898", "///a/900" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -75.354, "beta": -178.964, "gamma": 52.572, "delta": 78.967, "epsilon": -131.606, "zeta": -60.204, "epsilon_zeta": -71.402, "bb_type": "BI", "chi": -154.602, "glyco_bond": "anti", "C5prime_xyz": [ -1.603, 8.807, 0.174 ], "P_xyz": [ 0.881, 9.576, 0.429 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.022, "theta": -123.406, "eta_prime": 175.456, "theta_prime": -116.424, "eta_base": -146.829, "theta_base": -71.833, "v0": -1.483, "v1": -21.763, "v2": 35.409, "v3": -37.160, "v4": 24.423, "amplitude": 37.867, "phase_angle": 20.757, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.883, "filter_rmsd": 0.100, "frame": { "rmsd": 0.014, "origin": [ 230.437, 216.926, 263.649 ], "x_axis": [ 0.656, 0.201, -0.728 ], "y_axis": [ 0.541, 0.547, 0.639 ], "z_axis": [ 0.526, -0.813, 0.249 ], "quaternion": [ 0.783, 0.464, 0.400, -0.109 ] } }, { "index": 899, "index_chain": 899, "chain_name": "a", "nt_resnum": 900, "nt_name": "A", "nt_code": "A", "nt_id": "///a/900", "linked_nts": [ "///a/899", "///a/901" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -68.903, "beta": 164.796, "gamma": 68.045, "delta": 77.374, "epsilon": -151.140, "zeta": -77.703, "epsilon_zeta": -73.438, "bb_type": "BI", "chi": -157.414, "glyco_bond": "anti", "C5prime_xyz": [ -1.526, 8.734, 0.337 ], "P_xyz": [ 0.949, 9.277, -0.311 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.774, "theta": -179.837, "eta_prime": -167.711, "theta_prime": 164.552, "eta_base": -102.951, "theta_base": 153.221, "v0": 2.094, "v1": -26.117, "v2": 39.029, "v3": -38.778, "v4": 23.143, "amplitude": 40.537, "phase_angle": 15.676, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.546, "filter_rmsd": 0.039, "frame": { "rmsd": 0.013, "origin": [ 236.348, 216.269, 262.396 ], "x_axis": [ 0.720, 0.685, 0.108 ], "y_axis": [ -0.172, 0.025, 0.985 ], "z_axis": [ 0.672, -0.728, 0.136 ], "quaternion": [ 0.686, 0.624, 0.205, 0.313 ] } }, { "index": 900, "index_chain": 900, "chain_name": "a", "nt_resnum": 901, "nt_name": "A", "nt_code": "A", "nt_id": "///a/901", "linked_nts": [ "///a/900", "///a/902" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -123.067, "beta": 96.039, "gamma": 162.688, "delta": 80.797, "epsilon": -131.773, "zeta": -76.054, "epsilon_zeta": -55.719, "bb_type": "BI", "chi": -178.608, "glyco_bond": "anti", "C5prime_xyz": [ -1.250, 8.301, 1.635 ], "P_xyz": [ -1.334, 10.538, 0.304 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -167.577, "theta": 168.161, "eta_prime": 170.458, "theta_prime": -172.947, "eta_base": 151.660, "theta_base": -123.787, "v0": 6.107, "v1": -28.036, "v2": 38.203, "v3": -35.654, "v4": 18.596, "amplitude": 38.758, "phase_angle": 9.704, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.761, "filter_rmsd": 0.041, "frame": { "rmsd": 0.013, "origin": [ 233.673, 206.511, 260.894 ], "x_axis": [ 0.637, 0.475, -0.607 ], "y_axis": [ 0.309, 0.565, 0.765 ], "z_axis": [ 0.706, -0.675, 0.213 ], "quaternion": [ 0.777, 0.463, 0.423, 0.053 ] } }, { "index": 901, "index_chain": 901, "chain_name": "a", "nt_resnum": 902, "nt_name": "A", "nt_code": "A", "nt_id": "///a/902", "linked_nts": [ "///a/901", "///a/903" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -61.749, "beta": 160.396, "gamma": 65.702, "delta": 81.942, "epsilon": -141.610, "zeta": -81.089, "epsilon_zeta": -60.521, "bb_type": "BI", "chi": -157.995, "glyco_bond": "anti", "C5prime_xyz": [ -1.280, 8.620, 0.409 ], "P_xyz": [ 1.239, 8.830, -0.228 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.053, "theta": -145.615, "eta_prime": -168.796, "theta_prime": -147.845, "eta_base": -110.426, "theta_base": -139.488, "v0": 5.546, "v1": -27.760, "v2": 38.230, "v3": -36.055, "v4": 19.254, "amplitude": 38.893, "phase_angle": 10.592, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.639, "filter_rmsd": 0.041, "frame": { "rmsd": 0.015, "origin": [ 236.865, 205.030, 259.582 ], "x_axis": [ 0.833, 0.544, 0.103 ], "y_axis": [ -0.084, -0.059, 0.995 ], "z_axis": [ 0.547, -0.837, -0.004 ], "quaternion": [ 0.665, 0.689, 0.167, 0.236 ] } }, { "index": 902, "index_chain": 902, "chain_name": "a", "nt_resnum": 903, "nt_name": "A", "nt_code": "A", "nt_id": "///a/903", "linked_nts": [ "///a/902", "///a/904" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -64.562, "beta": 161.006, "gamma": 69.005, "delta": 79.365, "epsilon": -138.297, "zeta": -51.105, "epsilon_zeta": -87.192, "bb_type": "BI", "chi": -161.510, "glyco_bond": "anti", "C5prime_xyz": [ -1.862, 8.758, 0.535 ], "P_xyz": [ 0.581, 9.540, 0.049 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.885, "theta": -117.639, "eta_prime": -173.216, "theta_prime": -115.586, "eta_base": -151.153, "theta_base": -62.000, "v0": -2.388, "v1": -21.396, "v2": 35.614, "v3": -37.920, "v4": 25.449, "amplitude": 38.420, "phase_angle": 22.034, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.557, "filter_rmsd": 0.041, "frame": { "rmsd": 0.016, "origin": [ 239.398, 202.153, 257.816 ], "x_axis": [ 0.682, 0.580, 0.446 ], "y_axis": [ -0.333, -0.296, 0.895 ], "z_axis": [ 0.651, -0.759, -0.008 ], "quaternion": [ 0.587, 0.705, 0.088, 0.389 ] } }, { "index": 903, "index_chain": 903, "chain_name": "a", "nt_resnum": 904, "nt_name": "C", "nt_code": "C", "nt_id": "///a/904", "linked_nts": [ "///a/903", "///a/905" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -79.963, "beta": 168.936, "gamma": 69.326, "delta": 82.224, "epsilon": -142.354, "zeta": -72.784, "epsilon_zeta": -69.570, "bb_type": "BI", "chi": -157.073, "glyco_bond": "anti", "C5prime_xyz": [ -1.414, 8.828, 0.340 ], "P_xyz": [ 1.163, 9.237, 0.064 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.231, "theta": -138.401, "eta_prime": -167.672, "theta_prime": -138.375, "eta_base": -90.797, "theta_base": -103.617, "v0": -1.035, "v1": -20.893, "v2": 33.682, "v3": -35.125, "v4": 22.842, "amplitude": 35.886, "phase_angle": 20.184, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.413, "filter_rmsd": 0.066, "frame": { "rmsd": 0.010, "origin": [ 243.277, 202.417, 262.359 ], "x_axis": [ -0.192, 0.071, 0.979 ], "y_axis": [ -0.576, -0.815, -0.054 ], "z_axis": [ 0.794, -0.574, 0.197 ], "quaternion": [ 0.218, 0.597, -0.212, 0.742 ] } }, { "index": 904, "index_chain": 904, "chain_name": "a", "nt_resnum": 905, "nt_name": "U", "nt_code": "U", "nt_id": "///a/905", "linked_nts": [ "///a/904", "///a/906" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -66.384, "beta": 169.173, "gamma": 55.387, "delta": 80.929, "epsilon": -151.051, "zeta": -85.006, "epsilon_zeta": -66.045, "bb_type": "BI", "chi": -153.989, "glyco_bond": "anti", "C5prime_xyz": [ -1.488, 8.740, 0.164 ], "P_xyz": [ 1.082, 9.171, 0.027 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.379, "theta": -156.964, "eta_prime": -179.403, "theta_prime": -156.719, "eta_base": -127.707, "theta_base": -144.903, "v0": 2.068, "v1": -24.831, "v2": 36.949, "v3": -36.692, "v4": 21.836, "amplitude": 38.352, "phase_angle": 15.543, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.971, "filter_rmsd": 0.106, "frame": { "rmsd": 0.014, "origin": [ 245.727, 200.666, 264.889 ], "x_axis": [ -0.648, -0.349, 0.677 ], "y_axis": [ -0.252, -0.740, -0.623 ], "z_axis": [ 0.718, -0.575, 0.392 ], "quaternion": [ -0.029, 0.418, -0.359, 0.834 ] } }, { "index": 905, "index_chain": 905, "chain_name": "a", "nt_resnum": 906, "nt_name": "C", "nt_code": "C", "nt_id": "///a/906", "linked_nts": [ "///a/905", "///a/907" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end,multiplet", "alpha": -61.912, "beta": 166.850, "gamma": 61.968, "delta": 81.189, "epsilon": -139.794, "zeta": -81.478, "epsilon_zeta": -58.316, "bb_type": "BI", "chi": -154.688, "glyco_bond": "anti", "C5prime_xyz": [ -1.442, 8.836, 0.183 ], "P_xyz": [ 1.114, 9.281, -0.160 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.236, "theta": -146.768, "eta_prime": -176.720, "theta_prime": -139.070, "eta_base": -157.285, "theta_base": -131.828, "v0": -0.472, "v1": -21.852, "v2": 34.611, "v3": -35.737, "v4": 22.868, "amplitude": 36.664, "phase_angle": 19.262, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.774, "filter_rmsd": 0.068, "frame": { "rmsd": 0.015, "origin": [ 249.090, 199.710, 267.158 ], "x_axis": [ -0.762, -0.539, 0.360 ], "y_axis": [ 0.049, -0.602, -0.797 ], "z_axis": [ 0.646, -0.589, 0.485 ], "quaternion": [ -0.174, 0.298, -0.410, 0.844 ] } }, { "index": 906, "index_chain": 906, "chain_name": "a", "nt_resnum": 907, "nt_name": "A", "nt_code": "A", "nt_id": "///a/907", "linked_nts": [ "///a/906", "///a/908" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": -73.841, "beta": 171.250, "gamma": 81.145, "delta": 148.180, "epsilon": -92.361, "zeta": 95.801, "epsilon_zeta": 171.838, "bb_type": "--", "chi": -118.920, "glyco_bond": "anti", "C5prime_xyz": [ -2.258, 8.500, -1.252 ], "P_xyz": [ 0.252, 9.222, -1.423 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -154.903, "theta": 147.822, "eta_prime": -132.927, "theta_prime": 118.079, "eta_base": -128.897, "theta_base": 134.635, "v0": -24.462, "v1": 38.616, "v2": -37.092, "v3": 23.953, "v4": 0.108, "amplitude": 39.221, "phase_angle": 161.034, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.235, "filter_rmsd": 0.042, "frame": { "rmsd": 0.014, "origin": [ 250.740, 198.075, 269.650 ], "x_axis": [ -0.890, -0.407, -0.207 ], "y_axis": [ 0.421, -0.555, -0.718 ], "z_axis": [ 0.178, -0.725, 0.665 ], "quaternion": [ -0.235, -0.008, -0.409, 0.882 ] } }, { "index": 907, "index_chain": 907, "chain_name": "a", "nt_resnum": 908, "nt_name": "A", "nt_code": "A", "nt_id": "///a/908", "linked_nts": [ "///a/907", "///a/909" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": 70.089, "beta": -105.640, "gamma": -145.089, "delta": 83.570, "epsilon": -152.361, "zeta": -67.008, "epsilon_zeta": -85.352, "bb_type": "BI", "chi": -166.127, "glyco_bond": "anti", "C5prime_xyz": [ -1.551, 8.690, 0.840 ], "P_xyz": [ -1.282, 10.206, -1.270 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -126.582, "theta": -161.850, "eta_prime": -145.309, "theta_prime": -164.234, "eta_base": -130.699, "theta_base": -132.293, "v0": -2.840, "v1": -18.671, "v2": 31.769, "v3": -34.298, "v4": 23.525, "amplitude": 34.575, "phase_angle": 23.242, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "0i", "suiteness": 0.010, "filter_rmsd": 0.043, "frame": { "rmsd": 0.019, "origin": [ 254.234, 203.498, 270.398 ], "x_axis": [ 0.510, 0.017, 0.860 ], "y_axis": [ 0.658, -0.652, -0.377 ], "z_axis": [ 0.554, 0.758, -0.344 ], "quaternion": [ -0.359, 0.791, 0.213, 0.447 ] } }, { "index": 908, "index_chain": 908, "chain_name": "a", "nt_resnum": 909, "nt_name": "A", "nt_code": "A", "nt_id": "///a/909", "linked_nts": [ "///a/908", "///a/910" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": 143.091, "beta": -178.574, "gamma": 178.459, "delta": 82.311, "epsilon": -112.884, "zeta": -68.483, "epsilon_zeta": -44.401, "bb_type": "--", "chi": -179.192, "glyco_bond": "anti", "C5prime_xyz": [ -1.114, 8.229, 1.656 ], "P_xyz": [ 0.355, 10.251, 0.942 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 147.649, "theta": -145.496, "eta_prime": 164.309, "theta_prime": -136.006, "eta_base": -146.706, "theta_base": -89.300, "v0": 7.467, "v1": -29.062, "v2": 38.473, "v3": -35.211, "v4": 17.513, "amplitude": 38.831, "phase_angle": 7.788, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.817, "filter_rmsd": 0.041, "frame": { "rmsd": 0.014, "origin": [ 256.258, 207.129, 271.675 ], "x_axis": [ 0.600, -0.598, 0.531 ], "y_axis": [ 0.221, -0.513, -0.829 ], "z_axis": [ 0.769, 0.615, -0.176 ], "quaternion": [ -0.477, 0.756, -0.125, 0.429 ] } }, { "index": 909, "index_chain": 909, "chain_name": "a", "nt_resnum": 910, "nt_name": "U", "nt_code": "U", "nt_id": "///a/910", "linked_nts": [ "///a/909", "///a/911" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -75.197, "beta": 160.944, "gamma": 78.325, "delta": 80.171, "epsilon": -151.366, "zeta": -70.898, "epsilon_zeta": -80.469, "bb_type": "BI", "chi": -163.820, "glyco_bond": "anti", "C5prime_xyz": [ -1.487, 8.720, 0.730 ], "P_xyz": [ 0.965, 9.297, 0.027 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.027, "theta": -145.977, "eta_prime": -169.585, "theta_prime": -147.733, "eta_base": -104.739, "theta_base": -121.764, "v0": 0.981, "v1": -24.276, "v2": 37.041, "v3": -37.356, "v4": 22.923, "amplitude": 38.750, "phase_angle": 17.078, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.072, "filter_rmsd": 0.110, "frame": { "rmsd": 0.015, "origin": [ 261.450, 206.783, 272.912 ], "x_axis": [ 0.535, -0.773, -0.342 ], "y_axis": [ -0.247, 0.244, -0.938 ], "z_axis": [ 0.808, 0.586, -0.060 ], "quaternion": [ 0.655, -0.581, 0.439, -0.201 ] } }, { "index": 910, "index_chain": 910, "chain_name": "a", "nt_resnum": 911, "nt_name": "G", "nt_code": "G", "nt_id": "///a/911", "linked_nts": [ "///a/910", "///a/912" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem,multiplet", "alpha": -78.894, "beta": -179.594, "gamma": 72.248, "delta": 80.139, "epsilon": -106.875, "zeta": -97.110, "epsilon_zeta": -9.765, "bb_type": "--", "chi": -175.514, "glyco_bond": "anti", "C5prime_xyz": [ -1.164, 8.494, 1.408 ], "P_xyz": [ 1.433, 8.790, 1.584 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -174.697, "theta": -142.887, "eta_prime": -166.400, "theta_prime": -141.005, "eta_base": -130.691, "theta_base": -120.711, "v0": 4.051, "v1": -26.911, "v2": 38.335, "v3": -36.949, "v4": 20.723, "amplitude": 39.305, "phase_angle": 12.756, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.407, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 266.800, 208.504, 272.960 ], "x_axis": [ 0.129, -0.550, -0.825 ], "y_axis": [ -0.713, 0.527, -0.463 ], "z_axis": [ 0.689, 0.648, -0.325 ], "quaternion": [ 0.577, -0.481, 0.656, 0.070 ] } }, { "index": 911, "index_chain": 911, "chain_name": "a", "nt_resnum": 912, "nt_name": "A", "nt_code": "A", "nt_id": "///a/912", "linked_nts": [ "///a/911", "///a/913" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end,multiplet", "alpha": -70.543, "beta": 129.450, "gamma": 79.207, "delta": 74.974, "epsilon": -125.835, "zeta": -78.279, "epsilon_zeta": -47.556, "bb_type": "--", "chi": -167.681, "glyco_bond": "anti", "C5prime_xyz": [ -1.540, 8.654, 0.897 ], "P_xyz": [ 0.566, 9.112, -0.548 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.270, "theta": -138.326, "eta_prime": 173.710, "theta_prime": -142.110, "eta_base": -150.393, "theta_base": -103.855, "v0": 2.151, "v1": -27.416, "v2": 41.040, "v3": -40.743, "v4": 24.321, "amplitude": 42.629, "phase_angle": 15.697, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.431, "filter_rmsd": 0.041, "frame": { "rmsd": 0.017, "origin": [ 269.541, 209.243, 272.270 ], "x_axis": [ -0.159, -0.279, -0.947 ], "y_axis": [ -0.481, 0.860, -0.173 ], "z_axis": [ 0.862, 0.428, -0.271 ], "quaternion": [ 0.598, -0.251, 0.757, 0.084 ] } }, { "index": 912, "index_chain": 912, "chain_name": "a", "nt_resnum": 913, "nt_name": "A", "nt_code": "A", "nt_id": "///a/913", "linked_nts": [ "///a/912", "///a/914" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -74.277, "beta": 148.045, "gamma": 85.706, "delta": 79.591, "epsilon": -156.953, "zeta": -80.728, "epsilon_zeta": -76.224, "bb_type": "BI", "chi": -154.170, "glyco_bond": "anti", "C5prime_xyz": [ -1.299, 8.620, 0.173 ], "P_xyz": [ 0.772, 8.928, -1.390 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.802, "theta": -132.491, "eta_prime": -171.509, "theta_prime": -149.473, "eta_base": -109.074, "theta_base": -153.079, "v0": 6.263, "v1": -29.279, "v2": 39.994, "v3": -37.328, "v4": 19.629, "amplitude": 40.595, "phase_angle": 9.870, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.010, "filter_rmsd": 0.043, "frame": { "rmsd": 0.022, "origin": [ 271.492, 209.356, 269.015 ], "x_axis": [ -0.291, 0.363, -0.885 ], "y_axis": [ 0.056, 0.930, 0.363 ], "z_axis": [ 0.955, 0.056, -0.291 ], "quaternion": [ 0.581, 0.132, 0.792, 0.132 ] } }, { "index": 913, "index_chain": 913, "chain_name": "a", "nt_resnum": 914, "nt_name": "U", "nt_code": "U", "nt_id": "///a/914", "linked_nts": [ "///a/913", "///a/915" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix", "alpha": 172.012, "beta": -167.571, "gamma": 164.991, "delta": 81.459, "epsilon": -118.438, "zeta": -94.645, "epsilon_zeta": -23.794, "bb_type": "--", "chi": -166.293, "glyco_bond": "anti", "C5prime_xyz": [ -1.455, 8.668, 0.933 ], "P_xyz": [ 0.215, 10.212, -0.309 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.696, "theta": -167.140, "eta_prime": 173.949, "theta_prime": -163.353, "eta_base": -173.468, "theta_base": -149.465, "v0": 0.033, "v1": -22.200, "v2": 34.770, "v3": -35.690, "v4": 22.412, "amplitude": 36.672, "phase_angle": 18.530, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.486, "filter_rmsd": 0.103, "frame": { "rmsd": 0.014, "origin": [ 274.430, 207.205, 266.742 ], "x_axis": [ -0.598, 0.574, -0.560 ], "y_axis": [ 0.255, 0.798, 0.546 ], "z_axis": [ 0.760, 0.183, -0.623 ], "quaternion": [ 0.380, 0.239, 0.869, 0.210 ] } }, { "index": 914, "index_chain": 914, "chain_name": "a", "nt_resnum": 915, "nt_name": "U", "nt_code": "U", "nt_id": "///a/915", "linked_nts": [ "///a/914", "///a/916" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -61.780, "beta": 149.616, "gamma": 59.895, "delta": 74.170, "epsilon": -137.714, "zeta": -49.920, "epsilon_zeta": -87.794, "bb_type": "BI", "chi": -153.691, "glyco_bond": "anti", "C5prime_xyz": [ -1.994, 8.833, 0.115 ], "P_xyz": [ 0.338, 9.563, -0.708 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.022, "theta": -123.678, "eta_prime": 171.636, "theta_prime": -131.803, "eta_base": -166.128, "theta_base": -97.581, "v0": -2.313, "v1": -23.557, "v2": 39.083, "v3": -41.473, "v4": 27.530, "amplitude": 42.051, "phase_angle": 21.655, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.292, "filter_rmsd": 0.103, "frame": { "rmsd": 0.014, "origin": [ 276.577, 206.596, 263.870 ], "x_axis": [ -0.556, 0.791, -0.255 ], "y_axis": [ 0.573, 0.586, 0.573 ], "z_axis": [ 0.603, 0.172, -0.779 ], "quaternion": [ 0.251, 0.399, 0.855, 0.218 ] } }, { "index": 915, "index_chain": 915, "chain_name": "a", "nt_resnum": 916, "nt_name": "G", "nt_code": "G", "nt_id": "///a/916", "linked_nts": [ "///a/915", "///a/917" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -129.320, "beta": 143.593, "gamma": 136.058, "delta": 82.985, "epsilon": -128.369, "zeta": -74.691, "epsilon_zeta": -53.678, "bb_type": "BI", "chi": -168.134, "glyco_bond": "anti", "C5prime_xyz": [ -1.267, 8.633, 1.049 ], "P_xyz": [ 0.218, 10.135, -0.490 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.972, "theta": -157.486, "eta_prime": -172.590, "theta_prime": -152.045, "eta_base": -118.826, "theta_base": -99.260, "v0": 1.812, "v1": -22.642, "v2": 33.734, "v3": -33.583, "v4": 20.113, "amplitude": 35.046, "phase_angle": 15.730, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 275.951, 209.820, 260.698 ], "x_axis": [ -0.207, 0.898, 0.387 ], "y_axis": [ 0.897, 0.017, 0.441 ], "z_axis": [ 0.389, 0.439, -0.810 ], "quaternion": [ 0.001, 0.630, 0.713, 0.308 ] } }, { "index": 916, "index_chain": 916, "chain_name": "a", "nt_resnum": 917, "nt_name": "A", "nt_code": "A", "nt_id": "///a/917", "linked_nts": [ "///a/916", "///a/918" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -65.827, "beta": 159.878, "gamma": 58.434, "delta": 81.714, "epsilon": -143.703, "zeta": -67.502, "epsilon_zeta": -76.201, "bb_type": "BI", "chi": -150.209, "glyco_bond": "anti", "C5prime_xyz": [ -1.357, 8.666, -0.062 ], "P_xyz": [ 1.155, 8.866, -0.724 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.003, "theta": -134.268, "eta_prime": -178.735, "theta_prime": -136.102, "eta_base": -110.409, "theta_base": -101.590, "v0": 4.045, "v1": -26.484, "v2": 37.551, "v3": -36.136, "v4": 20.317, "amplitude": 38.485, "phase_angle": 12.643, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.719, "filter_rmsd": 0.040, "frame": { "rmsd": 0.019, "origin": [ 276.868, 213.114, 259.534 ], "x_axis": [ 0.510, 0.665, 0.546 ], "y_axis": [ 0.848, -0.495, -0.189 ], "z_axis": [ 0.145, 0.560, -0.816 ], "quaternion": [ -0.223, 0.840, 0.450, 0.206 ] } }, { "index": 917, "index_chain": 917, "chain_name": "a", "nt_resnum": 918, "nt_name": "C", "nt_code": "C", "nt_id": "///a/918", "linked_nts": [ "///a/917", "///a/919" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -81.808, "beta": 161.364, "gamma": 77.346, "delta": 78.748, "epsilon": -141.244, "zeta": -78.964, "epsilon_zeta": -62.280, "bb_type": "BI", "chi": -145.682, "glyco_bond": "anti", "C5prime_xyz": [ -1.715, 8.806, -0.357 ], "P_xyz": [ 0.553, 9.190, -1.620 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.695, "theta": -146.511, "eta_prime": -176.744, "theta_prime": -148.602, "eta_base": -123.490, "theta_base": -140.448, "v0": 0.296, "v1": -23.873, "v2": 37.105, "v3": -37.818, "v4": 23.665, "amplitude": 39.036, "phase_angle": 18.094, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.193, "filter_rmsd": 0.070, "frame": { "rmsd": 0.016, "origin": [ 278.059, 215.957, 258.930 ], "x_axis": [ 0.873, 0.252, 0.417 ], "y_axis": [ 0.487, -0.503, -0.714 ], "z_axis": [ 0.030, 0.827, -0.562 ], "quaternion": [ -0.449, 0.857, 0.216, 0.130 ] } }, { "index": 918, "index_chain": 918, "chain_name": "a", "nt_resnum": 919, "nt_name": "G", "nt_code": "G", "nt_id": "///a/919", "linked_nts": [ "///a/918", "///a/920" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -62.776, "beta": -171.311, "gamma": 39.689, "delta": 84.414, "epsilon": 177.948, "zeta": -95.695, "epsilon_zeta": -86.357, "bb_type": "BI", "chi": -141.834, "glyco_bond": "anti", "C5prime_xyz": [ -1.508, 8.764, -0.521 ], "P_xyz": [ 0.896, 9.658, -0.015 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.224, "theta": 158.207, "eta_prime": 175.065, "theta_prime": 123.831, "eta_base": -166.047, "theta_base": 77.909, "v0": -1.614, "v1": -18.676, "v2": 30.633, "v3": -32.464, "v4": 21.557, "amplitude": 32.902, "phase_angle": 21.406, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.612, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 278.642, 220.086, 257.802 ], "x_axis": [ 0.711, -0.553, 0.435 ], "y_axis": [ 0.109, -0.524, -0.845 ], "z_axis": [ 0.695, 0.648, -0.312 ], "quaternion": [ -0.468, 0.798, -0.139, 0.354 ] } }, { "index": 919, "index_chain": 919, "chain_name": "a", "nt_resnum": 920, "nt_name": "G", "nt_code": "G", "nt_id": "///a/920", "linked_nts": [ "///a/919", "///a/921" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -163.995, "beta": 123.203, "gamma": 44.568, "delta": 82.163, "epsilon": -99.379, "zeta": 92.994, "epsilon_zeta": 167.627, "bb_type": "--", "chi": -167.847, "glyco_bond": "anti", "C5prime_xyz": [ -1.500, 8.727, 0.965 ], "P_xyz": [ 1.110, 8.480, 0.892 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 49.826, "theta": 62.440, "eta_prime": 50.158, "theta_prime": 22.369, "eta_base": 63.928, "theta_base": -37.088, "v0": -0.709, "v1": -21.523, "v2": 34.187, "v3": -35.577, "v4": 22.882, "amplitude": 36.310, "phase_angle": 19.686, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.019, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 273.658, 217.793, 242.872 ], "x_axis": [ 0.269, -0.917, 0.294 ], "y_axis": [ 0.748, 0.391, 0.536 ], "z_axis": [ -0.607, 0.075, 0.791 ], "quaternion": [ 0.783, 0.147, -0.288, -0.532 ] } }, { "index": 920, "index_chain": 920, "chain_name": "a", "nt_resnum": 921, "nt_name": "G", "nt_code": "G", "nt_id": "///a/921", "linked_nts": [ "///a/920", "///a/922" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -142.591, "beta": -111.040, "gamma": -108.078, "delta": 80.651, "epsilon": -148.042, "zeta": -71.717, "epsilon_zeta": -76.325, "bb_type": "BI", "chi": -164.212, "glyco_bond": "anti", "C5prime_xyz": [ -1.300, 8.614, 0.754 ], "P_xyz": [ -1.843, 10.979, -0.220 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 38.595, "theta": 153.791, "eta_prime": 58.950, "theta_prime": 173.576, "eta_base": 124.454, "theta_base": -147.127, "v0": 4.937, "v1": -27.563, "v2": 38.501, "v3": -36.706, "v4": 20.074, "amplitude": 39.301, "phase_angle": 11.580, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 281.931, 222.231, 258.955 ], "x_axis": [ 0.393, -0.895, -0.213 ], "y_axis": [ -0.442, 0.019, -0.897 ], "z_axis": [ 0.806, 0.447, -0.388 ], "quaternion": [ 0.506, -0.664, 0.503, -0.224 ] } }, { "index": 921, "index_chain": 921, "chain_name": "a", "nt_resnum": 922, "nt_name": "G", "nt_code": "G", "nt_id": "///a/922", "linked_nts": [ "///a/921", "///a/923" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -70.839, "beta": 172.209, "gamma": 63.067, "delta": 77.213, "epsilon": -140.836, "zeta": -76.149, "epsilon_zeta": -64.687, "bb_type": "BI", "chi": -161.707, "glyco_bond": "anti", "C5prime_xyz": [ -1.154, 8.709, 0.593 ], "P_xyz": [ 1.417, 9.046, 0.293 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.565, "theta": -144.433, "eta_prime": -178.025, "theta_prime": -142.636, "eta_base": -134.828, "theta_base": -123.651, "v0": 4.546, "v1": -28.387, "v2": 40.252, "v3": -38.588, "v4": 21.453, "amplitude": 41.204, "phase_angle": 12.343, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.807, "filter_rmsd": 0.022, "frame": { "rmsd": 0.022, "origin": [ 285.835, 222.547, 258.479 ], "x_axis": [ 0.058, -0.722, -0.690 ], "y_axis": [ -0.517, 0.570, -0.639 ], "z_axis": [ 0.854, 0.393, -0.340 ], "quaternion": [ 0.567, -0.455, 0.680, -0.090 ] } }, { "index": 922, "index_chain": 922, "chain_name": "a", "nt_resnum": 923, "nt_name": "G", "nt_code": "G", "nt_id": "///a/923", "linked_nts": [ "///a/922", "///a/924" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -57.864, "beta": 168.992, "gamma": 61.128, "delta": 76.423, "epsilon": -149.887, "zeta": -91.252, "epsilon_zeta": -58.635, "bb_type": "BI", "chi": -165.579, "glyco_bond": "anti", "C5prime_xyz": [ -1.593, 8.756, 0.778 ], "P_xyz": [ 0.925, 9.422, 0.671 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.751, "theta": -133.135, "eta_prime": -171.569, "theta_prime": -140.159, "eta_base": -138.334, "theta_base": -116.227, "v0": 0.026, "v1": -24.515, "v2": 38.359, "v3": -39.412, "v4": 24.824, "amplitude": 40.470, "phase_angle": 18.584, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.809, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 290.236, 222.102, 257.121 ], "x_axis": [ -0.319, -0.420, -0.850 ], "y_axis": [ -0.491, 0.840, -0.231 ], "z_axis": [ 0.811, 0.343, -0.474 ], "quaternion": [ 0.512, -0.281, 0.811, 0.035 ] } }, { "index": 923, "index_chain": 923, "chain_name": "a", "nt_resnum": 924, "nt_name": "C", "nt_code": "C", "nt_id": "///a/924", "linked_nts": [ "///a/923", "///a/925" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 165.076, "beta": -151.517, "gamma": 160.324, "delta": 76.915, "epsilon": -131.945, "zeta": -68.355, "epsilon_zeta": -63.590, "bb_type": "BI", "chi": -163.311, "glyco_bond": "anti", "C5prime_xyz": [ -1.275, 8.692, 0.739 ], "P_xyz": [ 0.365, 9.746, -1.002 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 151.773, "theta": -143.838, "eta_prime": 169.255, "theta_prime": -146.709, "eta_base": -148.098, "theta_base": -125.596, "v0": 5.428, "v1": -29.054, "v2": 40.540, "v3": -38.381, "v4": 20.706, "amplitude": 41.321, "phase_angle": 11.155, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.276, "filter_rmsd": 0.075, "frame": { "rmsd": 0.017, "origin": [ 292.572, 220.849, 254.927 ], "x_axis": [ -0.589, 0.032, -0.807 ], "y_axis": [ -0.011, 0.999, 0.048 ], "z_axis": [ 0.808, 0.037, -0.588 ], "quaternion": [ 0.453, 0.006, 0.891, 0.024 ] } }, { "index": 924, "index_chain": 924, "chain_name": "a", "nt_resnum": 925, "nt_name": "C", "nt_code": "C", "nt_id": "///a/925", "linked_nts": [ "///a/924", "///a/926" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -69.689, "beta": 174.069, "gamma": 69.729, "delta": 75.521, "epsilon": -152.847, "zeta": -76.223, "epsilon_zeta": -76.624, "bb_type": "BI", "chi": -146.162, "glyco_bond": "anti", "C5prime_xyz": [ -2.084, 8.943, -0.389 ], "P_xyz": [ 0.166, 10.012, -1.162 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.285, "theta": -157.815, "eta_prime": -173.018, "theta_prime": -156.909, "eta_base": -137.202, "theta_base": -131.391, "v0": -6.847, "v1": -18.499, "v2": 35.240, "v3": -40.183, "v4": 29.685, "amplitude": 39.996, "phase_angle": 28.225, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.490, "filter_rmsd": 0.058, "frame": { "rmsd": 0.011, "origin": [ 293.283, 219.232, 251.631 ], "x_axis": [ -0.638, 0.490, -0.593 ], "y_axis": [ 0.485, 0.855, 0.184 ], "z_axis": [ 0.597, -0.170, -0.784 ], "quaternion": [ 0.329, 0.270, 0.905, 0.004 ] } }, { "index": 925, "index_chain": 925, "chain_name": "a", "nt_resnum": 926, "nt_name": "C", "nt_code": "C", "nt_id": "///a/926", "linked_nts": [ "///a/925", "///a/927" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -65.875, "beta": 164.193, "gamma": 68.162, "delta": 78.210, "epsilon": -165.518, "zeta": -98.397, "epsilon_zeta": -67.121, "bb_type": "BI", "chi": -140.345, "glyco_bond": "anti", "C5prime_xyz": [ -1.901, 8.870, -0.698 ], "P_xyz": [ 0.420, 9.526, -1.697 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.221, "theta": -143.802, "eta_prime": -173.065, "theta_prime": -149.278, "eta_base": -138.070, "theta_base": -128.924, "v0": -5.285, "v1": -18.479, "v2": 33.804, "v3": -37.804, "v4": 27.235, "amplitude": 37.769, "phase_angle": 26.488, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.587, "filter_rmsd": 0.064, "frame": { "rmsd": 0.007, "origin": [ 294.065, 218.664, 248.144 ], "x_axis": [ -0.386, 0.826, -0.410 ], "y_axis": [ 0.837, 0.500, 0.220 ], "z_axis": [ 0.387, -0.258, -0.885 ], "quaternion": [ 0.239, 0.500, 0.832, -0.012 ] } }, { "index": 926, "index_chain": 926, "chain_name": "a", "nt_resnum": 927, "nt_name": "G", "nt_code": "G", "nt_id": "///a/927", "linked_nts": [ "///a/926", "///a/928" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end", "alpha": 164.512, "beta": -133.868, "gamma": 163.228, "delta": 81.500, "epsilon": -114.213, "zeta": -120.147, "epsilon_zeta": 5.933, "bb_type": "--", "chi": -159.286, "glyco_bond": "anti", "C5prime_xyz": [ -1.672, 8.859, 0.464 ], "P_xyz": [ 0.154, 9.579, -1.241 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.626, "theta": -114.267, "eta_prime": -174.567, "theta_prime": -128.382, "eta_base": -144.687, "theta_base": -119.797, "v0": -3.312, "v1": -18.926, "v2": 32.681, "v3": -35.519, "v4": 24.555, "amplitude": 35.731, "phase_angle": 23.847, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.195, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 294.704, 218.655, 243.780 ], "x_axis": [ -0.062, 0.996, -0.064 ], "y_axis": [ 0.954, 0.078, 0.291 ], "z_axis": [ 0.294, -0.043, -0.955 ], "quaternion": [ 0.124, 0.674, 0.724, 0.085 ] } }, { "index": 927, "index_chain": 927, "chain_name": "a", "nt_resnum": 928, "nt_name": "C", "nt_code": "C", "nt_id": "///a/928", "linked_nts": [ "///a/927", "///a/929" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix", "alpha": 151.612, "beta": -93.084, "gamma": -90.183, "delta": 146.061, "epsilon": -143.763, "zeta": 158.242, "epsilon_zeta": 57.995, "bb_type": "--", "chi": -97.751, "glyco_bond": "anti", "C5prime_xyz": [ -2.232, 7.980, -2.249 ], "P_xyz": [ -3.615, 8.888, -4.288 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -42.758, "theta": 91.063, "eta_prime": -40.978, "theta_prime": 95.688, "eta_base": -46.606, "theta_base": 73.296, "v0": -21.207, "v1": 34.747, "v2": -34.126, "v3": 22.852, "v4": -1.163, "amplitude": 35.669, "phase_angle": 163.085, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.062, "frame": { "rmsd": 0.011, "origin": [ 304.085, 221.028, 233.229 ], "x_axis": [ 0.775, -0.320, -0.546 ], "y_axis": [ -0.008, -0.868, 0.497 ], "z_axis": [ -0.632, -0.380, -0.675 ], "quaternion": [ 0.241, 0.911, -0.090, -0.323 ] } }, { "index": 928, "index_chain": 928, "chain_name": "a", "nt_resnum": 929, "nt_name": "A", "nt_code": "A", "nt_id": "///a/929", "linked_nts": [ "///a/928", "///a/930" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 147.680, "beta": -138.173, "gamma": 60.245, "delta": 79.699, "epsilon": -174.472, "zeta": -90.050, "epsilon_zeta": -84.422, "bb_type": "BI", "chi": -160.780, "glyco_bond": "anti", "C5prime_xyz": [ -1.736, 8.737, 0.515 ], "P_xyz": [ 0.582, 9.248, 1.615 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 81.407, "theta": -144.750, "eta_prime": 70.850, "theta_prime": -148.258, "eta_base": 72.194, "theta_base": -127.539, "v0": -1.759, "v1": -21.304, "v2": 34.959, "v3": -36.924, "v4": 24.390, "amplitude": 37.501, "phase_angle": 21.217, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.038, "frame": { "rmsd": 0.016, "origin": [ 298.487, 223.613, 242.117 ], "x_axis": [ 0.972, -0.086, 0.220 ], "y_axis": [ -0.049, -0.985, -0.167 ], "z_axis": [ 0.231, 0.151, -0.961 ], "quaternion": [ -0.080, 0.990, -0.034, 0.114 ] } }, { "index": 929, "index_chain": 929, "chain_name": "a", "nt_resnum": 930, "nt_name": "C", "nt_code": "C", "nt_id": "///a/930", "linked_nts": [ "///a/929", "///a/931" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end,multiplet", "alpha": 162.973, "beta": -143.014, "gamma": 162.512, "delta": 77.327, "epsilon": -123.313, "zeta": -72.131, "epsilon_zeta": -51.182, "bb_type": "--", "chi": -171.678, "glyco_bond": "anti", "C5prime_xyz": [ -1.256, 8.645, 1.234 ], "P_xyz": [ 0.716, 9.685, -0.098 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.612, "theta": -137.427, "eta_prime": 175.834, "theta_prime": -134.726, "eta_base": -149.927, "theta_base": -89.610, "v0": 1.894, "v1": -25.364, "v2": 38.221, "v3": -38.044, "v4": 22.705, "amplitude": 39.740, "phase_angle": 15.892, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.335, "filter_rmsd": 0.069, "frame": { "rmsd": 0.011, "origin": [ 299.671, 226.010, 239.930 ], "x_axis": [ 0.856, -0.515, 0.044 ], "y_axis": [ -0.454, -0.791, -0.410 ], "z_axis": [ 0.246, 0.331, -0.911 ], "quaternion": [ -0.196, 0.943, -0.257, 0.077 ] } }, { "index": 930, "index_chain": 930, "chain_name": "a", "nt_resnum": 931, "nt_name": "A", "nt_code": "A", "nt_id": "///a/931", "linked_nts": [ "///a/930", "///a/932" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -54.955, "beta": 159.761, "gamma": 60.735, "delta": 80.856, "epsilon": -176.943, "zeta": 27.182, "epsilon_zeta": 155.875, "bb_type": "--", "chi": -162.276, "glyco_bond": "anti", "C5prime_xyz": [ -1.369, 8.660, 0.659 ], "P_xyz": [ 1.210, 8.983, 0.375 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.330, "theta": -85.269, "eta_prime": -165.468, "theta_prime": -111.561, "eta_base": -96.180, "theta_base": -86.455, "v0": 1.987, "v1": -23.989, "v2": 35.623, "v3": -35.494, "v4": 21.191, "amplitude": 36.994, "phase_angle": 15.648, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.566, "filter_rmsd": 0.037, "frame": { "rmsd": 0.011, "origin": [ 303.341, 224.646, 236.783 ], "x_axis": [ 0.145, -0.953, -0.266 ], "y_axis": [ -0.924, -0.035, -0.380 ], "z_axis": [ 0.353, 0.301, -0.886 ], "quaternion": [ -0.237, 0.719, -0.653, 0.030 ] } }, { "index": 931, "index_chain": 931, "chain_name": "a", "nt_resnum": 932, "nt_name": "A", "nt_code": "A", "nt_id": "///a/932", "linked_nts": [ "///a/931", "///a/933" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -174.823, "beta": 96.838, "gamma": 156.649, "delta": 84.143, "epsilon": -117.391, "zeta": -53.482, "epsilon_zeta": -63.909, "bb_type": "--", "chi": -172.375, "glyco_bond": "anti", "C5prime_xyz": [ -1.113, 8.312, 1.320 ], "P_xyz": [ -1.019, 10.328, -0.320 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.340, "theta": -126.598, "eta_prime": 176.331, "theta_prime": -131.378, "eta_base": -130.211, "theta_base": -82.407, "v0": 8.829, "v1": -29.123, "v2": 37.348, "v3": -33.273, "v4": 15.459, "amplitude": 37.512, "phase_angle": 5.358, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.015, "origin": [ 305.691, 222.058, 233.294 ], "x_axis": [ -0.497, -0.794, -0.349 ], "y_axis": [ -0.763, 0.592, -0.261 ], "z_axis": [ 0.414, 0.136, -0.900 ], "quaternion": [ 0.221, -0.450, 0.864, -0.036 ] } }, { "index": 932, "index_chain": 932, "chain_name": "a", "nt_resnum": 933, "nt_name": "G", "nt_code": "G", "nt_id": "///a/933", "linked_nts": [ "///a/932", "///a/934" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 149.485, "beta": 178.232, "gamma": 173.094, "delta": 81.306, "epsilon": -138.246, "zeta": -83.160, "epsilon_zeta": -55.086, "bb_type": "BI", "chi": -162.210, "glyco_bond": "anti", "C5prime_xyz": [ -1.232, 8.632, 0.648 ], "P_xyz": [ -0.127, 10.448, -0.891 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 131.018, "theta": -178.776, "eta_prime": 163.578, "theta_prime": -173.638, "eta_base": -122.633, "theta_base": -153.235, "v0": 6.044, "v1": -27.973, "v2": 38.067, "v3": -35.600, "v4": 18.674, "amplitude": 38.632, "phase_angle": 9.810, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.105, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 303.266, 218.654, 230.246 ], "x_axis": [ -1.000, 0.031, -0.004 ], "y_axis": [ 0.031, 0.963, -0.269 ], "z_axis": [ -0.005, -0.269, -0.963 ], "quaternion": [ -0.000, 0.015, 0.991, -0.136 ] } }, { "index": 933, "index_chain": 933, "chain_name": "a", "nt_resnum": 934, "nt_name": "C", "nt_code": "C", "nt_id": "///a/934", "linked_nts": [ "///a/933", "///a/935" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -62.862, "beta": 160.269, "gamma": 58.941, "delta": 75.207, "epsilon": -148.174, "zeta": -66.707, "epsilon_zeta": -81.467, "bb_type": "BI", "chi": -164.229, "glyco_bond": "anti", "C5prime_xyz": [ -1.527, 8.825, 0.747 ], "P_xyz": [ 1.005, 9.391, 0.475 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.410, "theta": -142.228, "eta_prime": 174.789, "theta_prime": -143.494, "eta_base": -154.883, "theta_base": -107.768, "v0": 1.027, "v1": -26.342, "v2": 40.307, "v3": -40.674, "v4": 24.941, "amplitude": 42.179, "phase_angle": 17.135, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.760, "filter_rmsd": 0.067, "frame": { "rmsd": 0.011, "origin": [ 302.779, 216.183, 227.729 ], "x_axis": [ -0.874, 0.484, 0.048 ], "y_axis": [ 0.438, 0.826, -0.354 ], "z_axis": [ -0.211, -0.288, -0.934 ], "quaternion": [ -0.068, 0.242, 0.953, -0.168 ] } }, { "index": 934, "index_chain": 934, "chain_name": "a", "nt_resnum": 935, "nt_name": "G", "nt_code": "G", "nt_id": "///a/935", "linked_nts": [ "///a/934", "///a/936" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -73.633, "beta": 168.715, "gamma": 66.586, "delta": 78.505, "epsilon": -145.248, "zeta": -65.020, "epsilon_zeta": -80.228, "bb_type": "BI", "chi": -166.594, "glyco_bond": "anti", "C5prime_xyz": [ -1.455, 8.756, 0.870 ], "P_xyz": [ 1.094, 9.323, 0.710 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.869, "theta": -146.311, "eta_prime": -178.060, "theta_prime": -154.098, "eta_base": -123.463, "theta_base": -150.665, "v0": 0.762, "v1": -24.218, "v2": 37.174, "v3": -37.702, "v4": 23.300, "amplitude": 38.973, "phase_angle": 17.477, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.637, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 300.034, 215.523, 225.836 ], "x_axis": [ -0.393, 0.917, -0.076 ], "y_axis": [ 0.833, 0.320, -0.451 ], "z_axis": [ -0.389, -0.240, -0.889 ], "quaternion": [ -0.097, 0.542, 0.806, -0.214 ] } }, { "index": 935, "index_chain": 935, "chain_name": "a", "nt_resnum": 936, "nt_name": "G", "nt_code": "G", "nt_id": "///a/936", "linked_nts": [ "///a/935", "///a/937" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -115.312, "beta": 137.230, "gamma": 127.169, "delta": 81.104, "epsilon": -148.368, "zeta": -69.656, "epsilon_zeta": -78.712, "bb_type": "BI", "chi": 174.201, "glyco_bond": "anti", "C5prime_xyz": [ -1.461, 8.381, 1.968 ], "P_xyz": [ 0.344, 9.990, 0.963 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.744, "theta": -164.721, "eta_prime": -177.018, "theta_prime": -161.413, "eta_base": -156.303, "theta_base": -137.369, "v0": 0.859, "v1": -23.174, "v2": 35.413, "v3": -35.818, "v4": 22.069, "amplitude": 37.082, "phase_angle": 17.255, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 296.814, 213.498, 224.478 ], "x_axis": [ -0.107, 0.987, -0.123 ], "y_axis": [ 0.880, 0.037, -0.473 ], "z_axis": [ -0.462, -0.159, -0.872 ], "quaternion": [ -0.119, 0.657, 0.710, -0.223 ] } }, { "index": 936, "index_chain": 936, "chain_name": "a", "nt_resnum": 937, "nt_name": "U", "nt_code": "U", "nt_id": "///a/937", "linked_nts": [ "///a/936", "///a/938" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -72.055, "beta": -170.224, "gamma": 54.502, "delta": 83.768, "epsilon": -138.125, "zeta": -67.504, "epsilon_zeta": -70.621, "bb_type": "BI", "chi": -161.442, "glyco_bond": "anti", "C5prime_xyz": [ -1.412, 8.693, 0.628 ], "P_xyz": [ 1.072, 9.081, 1.319 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.692, "theta": -129.694, "eta_prime": -173.548, "theta_prime": -123.685, "eta_base": -142.103, "theta_base": -77.758, "v0": 1.041, "v1": -22.481, "v2": 34.121, "v3": -34.452, "v4": 21.103, "amplitude": 35.674, "phase_angle": 16.963, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.856, "filter_rmsd": 0.107, "frame": { "rmsd": 0.012, "origin": [ 293.242, 212.965, 222.573 ], "x_axis": [ 0.367, 0.834, -0.412 ], "y_axis": [ 0.809, -0.504, -0.302 ], "z_axis": [ -0.459, -0.222, -0.860 ], "quaternion": [ -0.024, 0.826, 0.497, -0.264 ] } }, { "index": 937, "index_chain": 937, "chain_name": "a", "nt_resnum": 938, "nt_name": "G", "nt_code": "G", "nt_id": "///a/938", "linked_nts": [ "///a/937", "///a/939" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -66.321, "beta": 179.439, "gamma": 55.140, "delta": 84.420, "epsilon": -174.988, "zeta": 30.732, "epsilon_zeta": 154.280, "bb_type": "--", "chi": -135.814, "glyco_bond": "anti", "C5prime_xyz": [ -1.246, 8.620, -0.856 ], "P_xyz": [ 1.337, 8.853, -1.133 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.051, "theta": -60.408, "eta_prime": -168.826, "theta_prime": -75.895, "eta_base": -109.945, "theta_base": -54.531, "v0": 2.886, "v1": -23.117, "v2": 33.407, "v3": -32.665, "v4": 18.873, "amplitude": 34.422, "phase_angle": 13.947, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.910, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 293.367, 214.322, 218.332 ], "x_axis": [ 0.897, 0.161, -0.412 ], "y_axis": [ 0.124, -0.986, -0.114 ], "z_axis": [ -0.424, 0.051, -0.904 ], "quaternion": [ -0.042, 0.973, 0.073, -0.215 ] } }, { "index": 938, "index_chain": 938, "chain_name": "a", "nt_resnum": 939, "nt_name": "G", "nt_code": "G", "nt_id": "///a/939", "linked_nts": [ "///a/938", "///a/940" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -118.421, "beta": -134.211, "gamma": 6.745, "delta": 83.795, "epsilon": -150.391, "zeta": -66.575, "epsilon_zeta": -83.816, "bb_type": "BI", "chi": 179.503, "glyco_bond": "anti", "C5prime_xyz": [ -1.407, 8.466, 1.688 ], "P_xyz": [ -0.722, 9.207, 4.100 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 129.221, "theta": -162.240, "eta_prime": 162.569, "theta_prime": -148.010, "eta_base": -147.636, "theta_base": -105.610, "v0": 0.976, "v1": -21.999, "v2": 33.295, "v3": -33.639, "v4": 20.673, "amplitude": 34.817, "phase_angle": 17.004, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 299.533, 208.502, 211.397 ], "x_axis": [ 0.424, 0.120, 0.898 ], "y_axis": [ -0.901, 0.153, 0.405 ], "z_axis": [ -0.088, -0.981, 0.173 ], "quaternion": [ 0.661, 0.524, -0.373, 0.386 ] } }, { "index": 939, "index_chain": 939, "chain_name": "a", "nt_resnum": 940, "nt_name": "A", "nt_code": "A", "nt_id": "///a/940", "linked_nts": [ "///a/939", "///a/941" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -74.160, "beta": -174.075, "gamma": 55.623, "delta": 83.968, "epsilon": -148.127, "zeta": -67.324, "epsilon_zeta": -80.804, "bb_type": "BI", "chi": -172.123, "glyco_bond": "anti", "C5prime_xyz": [ -1.451, 8.562, 1.255 ], "P_xyz": [ 0.974, 8.842, 2.210 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.481, "theta": -139.047, "eta_prime": -173.724, "theta_prime": -137.933, "eta_base": -132.172, "theta_base": -106.905, "v0": 0.497, "v1": -21.555, "v2": 33.180, "v3": -33.787, "v4": 20.986, "amplitude": 34.842, "phase_angle": 17.767, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.866, "filter_rmsd": 0.041, "frame": { "rmsd": 0.012, "origin": [ 300.971, 204.237, 211.902 ], "x_axis": [ -0.183, 0.271, 0.945 ], "y_axis": [ -0.938, 0.238, -0.250 ], "z_axis": [ -0.293, -0.933, 0.211 ], "quaternion": [ 0.563, 0.303, -0.550, 0.538 ] } }, { "index": 940, "index_chain": 940, "chain_name": "a", "nt_resnum": 941, "nt_name": "G", "nt_code": "G", "nt_id": "///a/941", "linked_nts": [ "///a/940", "///a/942" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -86.911, "beta": 170.864, "gamma": 71.218, "delta": 81.355, "epsilon": -118.893, "zeta": -86.971, "epsilon_zeta": -31.922, "bb_type": "--", "chi": -171.103, "glyco_bond": "anti", "C5prime_xyz": [ -1.564, 8.683, 1.144 ], "P_xyz": [ 0.970, 9.208, 1.336 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.424, "theta": -142.551, "eta_prime": -177.840, "theta_prime": -143.670, "eta_base": -133.800, "theta_base": -118.361, "v0": -0.314, "v1": -22.200, "v2": 35.037, "v3": -36.198, "v4": 23.033, "amplitude": 37.079, "phase_angle": 19.102, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.349, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 301.189, 201.234, 213.799 ], "x_axis": [ -0.677, 0.454, 0.580 ], "y_axis": [ -0.645, 0.015, -0.764 ], "z_axis": [ -0.355, -0.891, 0.283 ], "quaternion": [ 0.394, 0.080, -0.594, 0.697 ] } }, { "index": 941, "index_chain": 941, "chain_name": "a", "nt_resnum": 942, "nt_name": "C", "nt_code": "C", "nt_id": "///a/942", "linked_nts": [ "///a/941", "///a/943" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -76.691, "beta": 138.285, "gamma": 81.667, "delta": 79.615, "epsilon": -149.998, "zeta": -66.720, "epsilon_zeta": -83.278, "bb_type": "BI", "chi": -161.759, "glyco_bond": "anti", "C5prime_xyz": [ -1.536, 8.871, 0.566 ], "P_xyz": [ 0.710, 9.339, -0.662 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.327, "theta": -141.030, "eta_prime": 175.047, "theta_prime": -147.465, "eta_base": -142.580, "theta_base": -124.047, "v0": -2.921, "v1": -20.258, "v2": 34.417, "v3": -37.022, "v4": 25.223, "amplitude": 37.382, "phase_angle": 22.975, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.298, "filter_rmsd": 0.067, "frame": { "rmsd": 0.011, "origin": [ 300.625, 199.323, 215.528 ], "x_axis": [ -0.911, 0.387, 0.144 ], "y_axis": [ -0.324, -0.452, -0.831 ], "z_axis": [ -0.256, -0.804, 0.537 ], "quaternion": [ 0.209, -0.033, -0.480, 0.851 ] } }, { "index": 942, "index_chain": 942, "chain_name": "a", "nt_resnum": 943, "nt_name": "A", "nt_code": "A", "nt_id": "///a/943", "linked_nts": [ "///a/942", "///a/944" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -74.543, "beta": -178.361, "gamma": 56.623, "delta": 81.114, "epsilon": -146.497, "zeta": -65.503, "epsilon_zeta": -80.994, "bb_type": "BI", "chi": -170.359, "glyco_bond": "anti", "C5prime_xyz": [ -1.786, 8.678, 1.091 ], "P_xyz": [ 0.612, 9.353, 1.880 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.652, "theta": -137.404, "eta_prime": -178.782, "theta_prime": -134.865, "eta_base": -138.061, "theta_base": -92.569, "v0": -1.766, "v1": -20.947, "v2": 34.261, "v3": -36.264, "v4": 23.982, "amplitude": 36.768, "phase_angle": 21.279, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.892, "filter_rmsd": 0.042, "frame": { "rmsd": 0.014, "origin": [ 298.388, 196.950, 218.941 ], "x_axis": [ -0.761, 0.387, -0.521 ], "y_axis": [ 0.324, -0.469, -0.821 ], "z_axis": [ -0.562, -0.794, 0.232 ], "quaternion": [ 0.020, -0.345, -0.515, 0.785 ] } }, { "index": 943, "index_chain": 943, "chain_name": "a", "nt_resnum": 944, "nt_name": "U", "nt_code": "U", "nt_id": "///a/944", "linked_nts": [ "///a/943", "///a/945" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -79.276, "beta": -177.461, "gamma": 55.487, "delta": 83.286, "epsilon": -158.030, "zeta": -77.105, "epsilon_zeta": -80.924, "bb_type": "BI", "chi": -161.996, "glyco_bond": "anti", "C5prime_xyz": [ -1.346, 8.725, 0.635 ], "P_xyz": [ 1.188, 9.167, 1.140 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.116, "theta": -155.803, "eta_prime": 177.728, "theta_prime": -158.023, "eta_base": -124.255, "theta_base": -158.287, "v0": -0.044, "v1": -21.523, "v2": 33.575, "v3": -34.499, "v4": 21.806, "amplitude": 35.430, "phase_angle": 18.625, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.795, "filter_rmsd": 0.105, "frame": { "rmsd": 0.011, "origin": [ 294.735, 195.326, 219.121 ], "x_axis": [ -0.143, 0.094, -0.985 ], "y_axis": [ 0.763, -0.624, -0.170 ], "z_axis": [ -0.630, -0.776, 0.018 ], "quaternion": [ -0.251, -0.605, -0.354, 0.668 ] } }, { "index": 944, "index_chain": 944, "chain_name": "a", "nt_resnum": 945, "nt_name": "G", "nt_code": "G", "nt_id": "///a/945", "linked_nts": [ "///a/944", "///a/946" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -72.055, "beta": 169.517, "gamma": 60.663, "delta": 80.061, "epsilon": -154.078, "zeta": -73.704, "epsilon_zeta": -80.374, "bb_type": "BI", "chi": -159.377, "glyco_bond": "anti", "C5prime_xyz": [ -1.623, 8.867, 0.418 ], "P_xyz": [ 0.885, 9.614, 0.299 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.899, "theta": -152.164, "eta_prime": 174.628, "theta_prime": -153.304, "eta_base": -173.770, "theta_base": -139.339, "v0": -2.370, "v1": -20.633, "v2": 34.293, "v3": -36.567, "v4": 24.571, "amplitude": 37.014, "phase_angle": 22.109, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.840, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 291.765, 194.730, 220.887 ], "x_axis": [ 0.098, -0.080, -0.992 ], "y_axis": [ 0.645, -0.754, 0.125 ], "z_axis": [ -0.758, -0.652, -0.023 ], "quaternion": [ 0.283, 0.685, 0.206, -0.639 ] } }, { "index": 945, "index_chain": 945, "chain_name": "a", "nt_resnum": 946, "nt_name": "U", "nt_code": "U", "nt_id": "///a/946", "linked_nts": [ "///a/945", "///a/947" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem", "alpha": -73.916, "beta": 167.615, "gamma": 66.262, "delta": 80.482, "epsilon": -150.469, "zeta": -69.988, "epsilon_zeta": -80.481, "bb_type": "BI", "chi": -146.974, "glyco_bond": "anti", "C5prime_xyz": [ -1.886, 8.803, -0.324 ], "P_xyz": [ 0.512, 9.533, -1.060 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.397, "theta": -144.290, "eta_prime": -179.476, "theta_prime": -144.425, "eta_base": -153.397, "theta_base": -116.528, "v0": -3.785, "v1": -19.462, "v2": 33.854, "v3": -36.962, "v4": 25.744, "amplitude": 37.143, "phase_angle": 24.293, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.681, "filter_rmsd": 0.103, "frame": { "rmsd": 0.012, "origin": [ 289.050, 194.362, 220.463 ], "x_axis": [ 0.304, -0.392, -0.868 ], "y_axis": [ 0.281, -0.834, 0.475 ], "z_axis": [ -0.910, -0.388, -0.144 ], "quaternion": [ 0.286, 0.755, -0.037, -0.589 ] } }, { "index": 946, "index_chain": 946, "chain_name": "a", "nt_resnum": 947, "nt_name": "G", "nt_code": "G", "nt_id": "///a/947", "linked_nts": [ "///a/946", "///a/948" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -72.062, "beta": 170.591, "gamma": 69.181, "delta": 75.890, "epsilon": -141.560, "zeta": -53.647, "epsilon_zeta": -87.914, "bb_type": "BI", "chi": -168.563, "glyco_bond": "anti", "C5prime_xyz": [ -1.524, 8.755, 0.983 ], "P_xyz": [ 0.996, 9.437, 0.800 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.448, "theta": -125.895, "eta_prime": -172.446, "theta_prime": -125.248, "eta_base": -129.582, "theta_base": -77.478, "v0": 0.845, "v1": -25.594, "v2": 39.397, "v3": -39.862, "v4": 24.592, "amplitude": 41.288, "phase_angle": 17.407, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.560, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 284.997, 190.955, 217.479 ], "x_axis": [ 0.636, -0.697, -0.333 ], "y_axis": [ 0.197, -0.270, 0.942 ], "z_axis": [ -0.746, -0.665, -0.034 ], "quaternion": [ 0.577, 0.696, -0.179, -0.387 ] } }, { "index": 947, "index_chain": 947, "chain_name": "a", "nt_resnum": 948, "nt_name": "G", "nt_code": "G", "nt_id": "///a/948", "linked_nts": [ "///a/947", "///a/949" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -83.998, "beta": 174.998, "gamma": 69.127, "delta": 78.401, "epsilon": -144.966, "zeta": -70.702, "epsilon_zeta": -74.264, "bb_type": "BI", "chi": -169.673, "glyco_bond": "anti", "C5prime_xyz": [ -1.489, 8.714, 1.039 ], "P_xyz": [ 1.059, 9.334, 1.051 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.216, "theta": -142.772, "eta_prime": -175.337, "theta_prime": -140.595, "eta_base": -102.967, "theta_base": -96.773, "v0": 1.284, "v1": -24.645, "v2": 37.365, "v3": -37.506, "v4": 22.840, "amplitude": 39.002, "phase_angle": 16.662, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.391, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 285.632, 186.240, 216.420 ], "x_axis": [ 0.641, -0.501, 0.581 ], "y_axis": [ -0.482, 0.326, 0.813 ], "z_axis": [ -0.597, -0.802, -0.032 ], "quaternion": [ 0.695, 0.580, -0.423, -0.007 ] } }, { "index": 948, "index_chain": 948, "chain_name": "a", "nt_resnum": 949, "nt_name": "U", "nt_code": "U", "nt_id": "///a/949", "linked_nts": [ "///a/948", "///a/950" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -69.372, "beta": 165.478, "gamma": 64.888, "delta": 82.384, "epsilon": -135.893, "zeta": -74.661, "epsilon_zeta": -61.232, "bb_type": "BI", "chi": -162.810, "glyco_bond": "anti", "C5prime_xyz": [ -1.352, 8.680, 0.723 ], "P_xyz": [ 1.250, 8.963, 0.518 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.465, "theta": -134.017, "eta_prime": -172.635, "theta_prime": -133.407, "eta_base": -112.427, "theta_base": -100.193, "v0": 3.072, "v1": -24.561, "v2": 35.616, "v3": -34.738, "v4": 19.986, "amplitude": 36.688, "phase_angle": 13.882, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.746, "filter_rmsd": 0.107, "frame": { "rmsd": 0.009, "origin": [ 285.617, 182.738, 217.119 ], "x_axis": [ 0.133, -0.155, 0.979 ], "y_axis": [ -0.868, 0.458, 0.190 ], "z_axis": [ -0.478, -0.875, -0.074 ], "quaternion": [ 0.616, 0.432, -0.591, 0.290 ] } }, { "index": 949, "index_chain": 949, "chain_name": "a", "nt_resnum": 950, "nt_name": "U", "nt_code": "U", "nt_id": "///a/950", "linked_nts": [ "///a/949", "///a/951" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -61.736, "beta": 160.993, "gamma": 62.423, "delta": 79.325, "epsilon": -150.286, "zeta": -75.417, "epsilon_zeta": -74.869, "bb_type": "BI", "chi": -168.638, "glyco_bond": "anti", "C5prime_xyz": [ -1.396, 8.677, 1.033 ], "P_xyz": [ 1.191, 9.075, 0.918 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.984, "theta": -148.356, "eta_prime": -173.289, "theta_prime": -149.372, "eta_base": -118.911, "theta_base": -133.318, "v0": 1.883, "v1": -24.996, "v2": 37.404, "v3": -37.175, "v4": 22.258, "amplitude": 38.871, "phase_angle": 15.790, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.775, "filter_rmsd": 0.107, "frame": { "rmsd": 0.009, "origin": [ 284.210, 178.707, 219.150 ], "x_axis": [ -0.418, 0.316, 0.851 ], "y_axis": [ -0.709, 0.473, -0.524 ], "z_axis": [ -0.568, -0.822, 0.026 ], "quaternion": [ 0.520, 0.144, -0.683, 0.493 ] } }, { "index": 950, "index_chain": 950, "chain_name": "a", "nt_resnum": 951, "nt_name": "U", "nt_code": "U", "nt_id": "///a/951", "linked_nts": [ "///a/950", "///a/952" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end,multiplet", "alpha": -65.784, "beta": 163.878, "gamma": 68.397, "delta": 81.329, "epsilon": -138.616, "zeta": -55.922, "epsilon_zeta": -82.694, "bb_type": "BI", "chi": -152.005, "glyco_bond": "anti", "C5prime_xyz": [ -1.702, 8.776, 0.047 ], "P_xyz": [ 0.762, 9.325, -0.629 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.327, "theta": -109.216, "eta_prime": -170.990, "theta_prime": -156.159, "eta_base": -141.312, "theta_base": 142.789, "v0": 0.491, "v1": -22.663, "v2": 34.892, "v3": -35.563, "v4": 22.142, "amplitude": 36.653, "phase_angle": 17.835, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.607, "filter_rmsd": 0.101, "frame": { "rmsd": 0.012, "origin": [ 284.032, 176.063, 220.436 ], "x_axis": [ -0.771, 0.296, 0.563 ], "y_axis": [ -0.584, 0.024, -0.812 ], "z_axis": [ -0.253, -0.955, 0.154 ], "quaternion": [ 0.319, 0.112, -0.641, 0.690 ] } }, { "index": 951, "index_chain": 951, "chain_name": "a", "nt_resnum": 952, "nt_name": "A", "nt_code": "A", "nt_id": "///a/952", "linked_nts": [ "///a/951", "///a/953" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI", "alpha": 179.908, "beta": 150.513, "gamma": 47.125, "delta": 84.376, "epsilon": -136.479, "zeta": -83.510, "epsilon_zeta": -52.969, "bb_type": "BI", "chi": -125.265, "glyco_bond": "anti", "C5prime_xyz": [ -1.561, 8.446, -1.426 ], "P_xyz": [ 0.938, 8.374, -2.191 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 28.310, "theta": -137.645, "eta_prime": 53.580, "theta_prime": -138.341, "eta_base": 26.405, "theta_base": -122.528, "v0": 1.616, "v1": -22.038, "v2": 32.866, "v3": -32.889, "v4": 19.788, "amplitude": 34.192, "phase_angle": 16.010, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.764, "filter_rmsd": 0.038, "frame": { "rmsd": 0.010, "origin": [ 288.505, 168.312, 213.115 ], "x_axis": [ 0.177, 0.747, -0.641 ], "y_axis": [ -0.860, 0.434, 0.269 ], "z_axis": [ 0.479, 0.503, 0.719 ], "quaternion": [ 0.763, -0.077, 0.367, 0.526 ] } }, { "index": 952, "index_chain": 952, "chain_name": "a", "nt_resnum": 953, "nt_name": "A", "nt_code": "A", "nt_id": "///a/953", "linked_nts": [ "///a/952", "///a/954" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": -54.999, "beta": 166.610, "gamma": 43.452, "delta": 79.249, "epsilon": -115.933, "zeta": -53.365, "epsilon_zeta": -62.567, "bb_type": "--", "chi": -105.244, "glyco_bond": "anti", "C5prime_xyz": [ -2.141, 7.934, -2.423 ], "P_xyz": [ 0.118, 8.056, -3.727 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.822, "theta": -119.050, "eta_prime": 179.853, "theta_prime": -118.427, "eta_base": -157.624, "theta_base": -79.108, "v0": -0.099, "v1": -22.697, "v2": 35.629, "v3": -36.657, "v4": 23.223, "amplitude": 37.632, "phase_angle": 18.778, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.692, "filter_rmsd": 0.041, "frame": { "rmsd": 0.013, "origin": [ 289.183, 170.876, 214.673 ], "x_axis": [ -0.265, 0.664, -0.699 ], "y_axis": [ -0.611, 0.445, 0.655 ], "z_axis": [ 0.746, 0.601, 0.288 ], "quaternion": [ 0.606, 0.022, 0.596, 0.526 ] } }, { "index": 953, "index_chain": 953, "chain_name": "a", "nt_resnum": 954, "nt_name": "U", "nt_code": "U", "nt_id": "///a/954", "linked_nts": [ "///a/953", "///a/955" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-canonical,helix", "alpha": -109.465, "beta": 111.294, "gamma": 167.261, "delta": 139.876, "epsilon": 8.134, "zeta": -71.748, "epsilon_zeta": -280.119, "bb_type": "--", "chi": 54.971, "glyco_bond": "syn", "C5prime_xyz": [ -5.417, 4.056, 0.932 ], "P_xyz": [ -6.267, 3.507, 3.345 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -72.822, "theta": -5.158, "eta_prime": -92.414, "theta_prime": 34.151, "eta_base": -71.415, "theta_base": -175.853, "v0": -21.118, "v1": 32.954, "v2": -31.424, "v3": 20.182, "v4": 0.389, "amplitude": 33.340, "phase_angle": 160.484, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.110, "frame": { "rmsd": 0.011, "origin": [ 284.240, 178.047, 214.905 ], "x_axis": [ 0.405, -0.153, -0.901 ], "y_axis": [ 0.877, -0.214, 0.431 ], "z_axis": [ -0.258, -0.965, 0.047 ], "quaternion": [ 0.557, 0.627, 0.289, -0.462 ] } }, { "index": 954, "index_chain": 954, "chain_name": "a", "nt_resnum": 955, "nt_name": "U", "nt_code": "U", "nt_id": "///a/955", "linked_nts": [ "///a/954", "///a/956" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": 133.412, "beta": 137.369, "gamma": 35.634, "delta": 78.764, "epsilon": 170.783, "zeta": 29.240, "epsilon_zeta": 141.544, "bb_type": "--", "chi": -153.752, "glyco_bond": "anti", "C5prime_xyz": [ -1.634, 8.828, 0.101 ], "P_xyz": [ 0.950, 9.126, 0.126 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -70.663, "theta": -93.001, "eta_prime": -76.848, "theta_prime": -120.410, "eta_base": 152.063, "theta_base": -96.241, "v0": -3.200, "v1": -19.832, "v2": 33.812, "v3": -36.702, "v4": 25.294, "amplitude": 36.885, "phase_angle": 23.554, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.105, "frame": { "rmsd": 0.011, "origin": [ 294.736, 175.655, 230.356 ], "x_axis": [ 0.568, 0.715, -0.407 ], "y_axis": [ -0.615, 0.041, -0.787 ], "z_axis": [ -0.546, 0.698, 0.464 ], "quaternion": [ 0.720, -0.516, -0.048, 0.462 ] } }, { "index": 955, "index_chain": 955, "chain_name": "a", "nt_resnum": 956, "nt_name": "C", "nt_code": "C", "nt_id": "///a/956", "linked_nts": [ "///a/955", "///a/957" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -176.415, "beta": 94.376, "gamma": 153.551, "delta": 85.334, "epsilon": -115.805, "zeta": -85.322, "epsilon_zeta": -30.483, "bb_type": "--", "chi": -167.866, "glyco_bond": "anti", "C5prime_xyz": [ -0.993, 8.520, 1.075 ], "P_xyz": [ -0.829, 10.291, -0.829 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.311, "theta": -179.558, "eta_prime": 173.197, "theta_prime": -164.467, "eta_base": -139.497, "theta_base": -117.988, "v0": 7.025, "v1": -27.248, "v2": 35.980, "v3": -32.871, "v4": 16.294, "amplitude": 36.304, "phase_angle": 7.659, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.075, "frame": { "rmsd": 0.017, "origin": [ 294.947, 180.025, 231.501 ], "x_axis": [ 0.184, 0.529, -0.829 ], "y_axis": [ -0.890, -0.268, -0.369 ], "z_axis": [ -0.417, 0.805, 0.421 ], "quaternion": [ 0.578, -0.508, 0.178, 0.613 ] } }, { "index": 956, "index_chain": 956, "chain_name": "a", "nt_resnum": 957, "nt_name": "G", "nt_code": "G", "nt_id": "///a/957", "linked_nts": [ "///a/956", "///a/958" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -56.527, "beta": 154.623, "gamma": 55.813, "delta": 82.568, "epsilon": -143.466, "zeta": -73.276, "epsilon_zeta": -70.190, "bb_type": "BI", "chi": 179.015, "glyco_bond": "anti", "C5prime_xyz": [ -1.321, 8.380, 1.755 ], "P_xyz": [ 1.279, 8.363, 2.074 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.795, "theta": -137.817, "eta_prime": -176.946, "theta_prime": -137.494, "eta_base": -117.596, "theta_base": -110.890, "v0": 4.244, "v1": -25.869, "v2": 36.425, "v3": -34.907, "v4": 19.413, "amplitude": 37.265, "phase_angle": 12.185, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.373, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 292.973, 184.881, 230.721 ], "x_axis": [ -0.323, -0.211, -0.923 ], "y_axis": [ -0.616, -0.693, 0.374 ], "z_axis": [ -0.719, 0.689, 0.094 ], "quaternion": [ 0.139, -0.565, 0.366, 0.726 ] } }, { "index": 957, "index_chain": 957, "chain_name": "a", "nt_resnum": 958, "nt_name": "A", "nt_code": "A", "nt_id": "///a/958", "linked_nts": [ "///a/957", "///a/959" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -69.128, "beta": -174.147, "gamma": 51.511, "delta": 83.548, "epsilon": -119.517, "zeta": -67.681, "epsilon_zeta": -51.836, "bb_type": "--", "chi": -177.184, "glyco_bond": "anti", "C5prime_xyz": [ -1.150, 8.294, 1.552 ], "P_xyz": [ 1.293, 8.257, 2.468 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.325, "theta": -119.925, "eta_prime": -173.726, "theta_prime": -108.979, "eta_base": -134.874, "theta_base": -53.351, "v0": 7.136, "v1": -28.174, "v2": 37.345, "v3": -34.204, "v4": 17.120, "amplitude": 37.706, "phase_angle": 7.932, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.914, "filter_rmsd": 0.039, "frame": { "rmsd": 0.014, "origin": [ 290.484, 188.782, 229.962 ], "x_axis": [ -0.500, -0.709, -0.497 ], "y_axis": [ -0.081, -0.533, 0.842 ], "z_axis": [ -0.862, 0.461, 0.209 ], "quaternion": [ -0.210, -0.454, 0.435, 0.749 ] } }, { "index": 958, "index_chain": 958, "chain_name": "a", "nt_resnum": 959, "nt_name": "A", "nt_code": "A", "nt_id": "///a/959", "linked_nts": [ "///a/958", "///a/960" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BII", "alpha": -59.955, "beta": -143.783, "gamma": 56.120, "delta": 143.081, "epsilon": -111.771, "zeta": 155.004, "epsilon_zeta": 93.225, "bb_type": "BII", "chi": 48.499, "glyco_bond": "syn", "C5prime_xyz": [ -5.592, 3.983, 0.711 ], "P_xyz": [ -6.272, 2.014, -0.884 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -149.910, "theta": 170.789, "eta_prime": -129.001, "theta_prime": 161.706, "eta_base": -87.197, "theta_base": 178.779, "v0": -25.739, "v1": 38.343, "v2": -35.638, "v3": 21.725, "v4": 2.236, "amplitude": 38.471, "phase_angle": 157.875, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1[", "suiteness": 0.745, "filter_rmsd": 0.039, "frame": { "rmsd": 0.006, "origin": [ 285.300, 186.996, 232.231 ], "x_axis": [ -0.513, -0.115, -0.851 ], "y_axis": [ -0.208, 0.978, -0.007 ], "z_axis": [ 0.833, 0.173, -0.526 ], "quaternion": [ 0.485, -0.093, 0.868, 0.048 ] } }, { "index": 959, "index_chain": 959, "chain_name": "a", "nt_resnum": 960, "nt_name": "G", "nt_code": "G", "nt_id": "///a/960", "linked_nts": [ "///a/959", "///a/961" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": 27.165, "beta": 171.358, "gamma": 37.725, "delta": 79.804, "epsilon": -135.651, "zeta": -84.688, "epsilon_zeta": -50.964, "bb_type": "BI", "chi": -166.487, "glyco_bond": "anti", "C5prime_xyz": [ -1.638, 8.739, 0.866 ], "P_xyz": [ 0.782, 9.417, 1.616 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -70.091, "theta": -149.289, "eta_prime": -85.428, "theta_prime": -142.651, "eta_base": -88.558, "theta_base": -105.130, "v0": -0.435, "v1": -22.504, "v2": 35.578, "v3": -36.824, "v4": 23.484, "amplitude": 37.685, "phase_angle": 19.251, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 285.002, 204.292, 241.360 ], "x_axis": [ -0.321, -0.452, 0.832 ], "y_axis": [ -0.069, -0.865, -0.496 ], "z_axis": [ 0.945, -0.217, 0.246 ], "quaternion": [ -0.123, 0.570, -0.229, 0.780 ] } }, { "index": 960, "index_chain": 960, "chain_name": "a", "nt_resnum": 961, "nt_name": "C", "nt_code": "C", "nt_id": "///a/961", "linked_nts": [ "///a/960", "///a/962" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -66.559, "beta": 163.995, "gamma": 61.996, "delta": 84.061, "epsilon": -152.156, "zeta": 44.888, "epsilon_zeta": 162.955, "bb_type": "--", "chi": -158.755, "glyco_bond": "anti", "C5prime_xyz": [ -1.320, 8.784, 0.457 ], "P_xyz": [ 1.286, 9.017, 0.317 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.862, "theta": -13.995, "eta_prime": -178.227, "theta_prime": -56.156, "eta_base": -131.286, "theta_base": -152.776, "v0": -0.026, "v1": -21.252, "v2": 33.220, "v3": -34.152, "v4": 21.570, "amplitude": 35.060, "phase_angle": 18.644, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.732, "filter_rmsd": 0.068, "frame": { "rmsd": 0.008, "origin": [ 287.618, 203.536, 243.784 ], "x_axis": [ -0.472, -0.841, 0.266 ], "y_axis": [ 0.272, -0.426, -0.863 ], "z_axis": [ 0.838, -0.335, 0.430 ], "quaternion": [ -0.365, 0.362, -0.393, 0.763 ] } }, { "index": 961, "index_chain": 961, "chain_name": "a", "nt_resnum": 962, "nt_name": "A", "nt_code": "A", "nt_id": "///a/962", "linked_nts": [ "///a/961", "///a/963" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn", "alpha": 153.745, "beta": 170.307, "gamma": 50.358, "delta": 144.711, "epsilon": -94.132, "zeta": -90.052, "epsilon_zeta": -4.080, "bb_type": "--", "chi": 42.998, "glyco_bond": "syn", "C5prime_xyz": [ -5.642, 4.086, 0.416 ], "P_xyz": [ -5.975, 1.748, -0.715 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 59.455, "theta": -11.626, "eta_prime": 119.408, "theta_prime": -75.307, "eta_base": 74.658, "theta_base": -93.068, "v0": -25.528, "v1": 38.528, "v2": -35.942, "v3": 22.244, "v4": 1.812, "amplitude": 38.636, "phase_angle": 158.477, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "5z", "suiteness": 0.729, "filter_rmsd": 0.038, "frame": { "rmsd": 0.010, "origin": [ 291.661, 203.241, 243.555 ], "x_axis": [ -0.644, 0.016, 0.765 ], "y_axis": [ -0.135, -0.986, -0.094 ], "z_axis": [ 0.753, -0.164, 0.637 ], "quaternion": [ 0.042, 0.420, -0.071, 0.904 ] } }, { "index": 962, "index_chain": 962, "chain_name": "a", "nt_resnum": 963, "nt_name": "A", "nt_code": "A", "nt_id": "///a/963", "linked_nts": [ "///a/962", "///a/964" ], "nt_type": "RNA", "dbn": ".", "summary": "", "alpha": -144.923, "beta": -111.029, "gamma": 7.164, "delta": 139.468, "epsilon": 3.935, "zeta": 82.377, "epsilon_zeta": -78.443, "bb_type": "--", "chi": -68.132, "glyco_bond": "--", "C5prime_xyz": [ -3.731, 6.933, -2.771 ], "P_xyz": [ -3.592, 9.510, -3.300 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 76.474, "theta": -170.541, "eta_prime": 147.889, "theta_prime": -169.581, "eta_base": 134.767, "theta_base": -100.314, "v0": -28.597, "v1": 39.382, "v2": -34.179, "v3": 18.622, "v4": 6.017, "amplitude": 38.625, "phase_angle": 152.238, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.036, "frame": { "rmsd": 0.013, "origin": [ 286.227, 192.740, 230.652 ], "x_axis": [ -0.723, 0.690, 0.038 ], "y_axis": [ 0.618, 0.622, 0.480 ], "z_axis": [ 0.308, 0.371, -0.876 ], "quaternion": [ 0.075, 0.364, 0.897, 0.237 ] } }, { "index": 963, "index_chain": 963, "chain_name": "a", "nt_resnum": 964, "nt_name": "C", "nt_code": "C", "nt_id": "///a/964", "linked_nts": [ "///a/963", "///a/965" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 170.873, "beta": -145.005, "gamma": 73.941, "delta": 82.250, "epsilon": -135.815, "zeta": -159.861, "epsilon_zeta": 24.046, "bb_type": "--", "chi": -103.035, "glyco_bond": "anti", "C5prime_xyz": [ -2.594, 7.916, -2.517 ], "P_xyz": [ -0.345, 8.414, -3.732 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.630, "theta": 107.404, "eta_prime": 163.584, "theta_prime": 135.106, "eta_base": -122.587, "theta_base": 160.191, "v0": -5.635, "v1": -16.491, "v2": 30.901, "v3": -34.990, "v4": 25.704, "amplitude": 34.887, "phase_angle": 27.656, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.066, "frame": { "rmsd": 0.011, "origin": [ 287.428, 197.308, 228.831 ], "x_axis": [ 0.139, 0.864, 0.484 ], "y_axis": [ 0.975, -0.205, 0.085 ], "z_axis": [ 0.173, 0.460, -0.871 ], "quaternion": [ -0.126, 0.744, 0.618, 0.221 ] } }, { "index": 964, "index_chain": 964, "chain_name": "a", "nt_resnum": 965, "nt_name": "G", "nt_code": "G", "nt_id": "///a/965", "linked_nts": [ "///a/964", "///a/966" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -52.855, "beta": -112.445, "gamma": 14.165, "delta": 141.114, "epsilon": -129.380, "zeta": 74.081, "epsilon_zeta": 156.539, "bb_type": "--", "chi": -84.397, "glyco_bond": "anti", "C5prime_xyz": [ -3.063, 7.617, -2.608 ], "P_xyz": [ -2.537, 10.187, -2.523 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -108.676, "theta": 75.171, "eta_prime": -141.113, "theta_prime": 53.243, "eta_base": -179.881, "theta_base": 57.165, "v0": -27.424, "v1": 38.558, "v2": -34.177, "v3": 19.305, "v4": 4.898, "amplitude": 38.064, "phase_angle": 153.880, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 304.310, 191.405, 220.291 ], "x_axis": [ -0.059, 0.749, -0.660 ], "y_axis": [ -0.499, 0.551, 0.669 ], "z_axis": [ 0.865, 0.369, 0.341 ], "quaternion": [ 0.677, 0.111, 0.563, 0.461 ] } }, { "index": 965, "index_chain": 965, "chain_name": "a", "nt_resnum": 966, "nt_name": "C", "nt_code": "C", "nt_id": "///a/966", "linked_nts": [ "///a/965", "///a/967" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-stack,canonical,helix-end,stem-end", "alpha": 51.505, "beta": 157.092, "gamma": -151.892, "delta": 72.414, "epsilon": -132.969, "zeta": -140.774, "epsilon_zeta": 7.805, "bb_type": "--", "chi": -166.498, "glyco_bond": "anti", "C5prime_xyz": [ -1.562, 8.834, 0.877 ], "P_xyz": [ -1.629, 11.403, 0.408 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 104.279, "theta": 152.650, "eta_prime": 99.102, "theta_prime": 172.898, "eta_base": 101.948, "theta_base": -169.509, "v0": -0.442, "v1": -25.957, "v2": 41.295, "v3": -42.517, "v4": 27.007, "amplitude": 43.701, "phase_angle": 19.100, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "6j", "suiteness": 0.037, "filter_rmsd": 0.065, "frame": { "rmsd": 0.010, "origin": [ 292.649, 185.680, 230.160 ], "x_axis": [ -0.006, -0.238, -0.971 ], "y_axis": [ 0.760, 0.631, -0.159 ], "z_axis": [ 0.650, -0.739, 0.177 ], "quaternion": [ 0.671, 0.216, 0.604, -0.372 ] } }, { "index": 966, "index_chain": 966, "chain_name": "a", "nt_resnum": 967, "nt_name": "G", "nt_code": "G", "nt_id": "///a/967", "linked_nts": [ "///a/966", "///a/968" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 159.750, "beta": -118.733, "gamma": 164.275, "delta": 83.312, "epsilon": -90.783, "zeta": -14.956, "epsilon_zeta": -75.827, "bb_type": "--", "chi": -169.111, "glyco_bond": "anti", "C5prime_xyz": [ -1.646, 8.764, 1.000 ], "P_xyz": [ 0.378, 9.315, -0.538 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -175.338, "theta": -33.058, "eta_prime": -179.201, "theta_prime": -64.299, "eta_base": -175.255, "theta_base": -149.366, "v0": -4.156, "v1": -17.741, "v2": 31.465, "v3": -34.723, "v4": 24.573, "amplitude": 34.794, "phase_angle": 25.269, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 294.209, 181.057, 231.646 ], "x_axis": [ -0.114, 0.267, -0.957 ], "y_axis": [ 0.772, 0.630, 0.084 ], "z_axis": [ 0.625, -0.729, -0.278 ], "quaternion": [ 0.556, 0.366, 0.711, -0.227 ] } }, { "index": 967, "index_chain": 967, "chain_name": "a", "nt_resnum": 968, "nt_name": "A", "nt_code": "A", "nt_id": "///a/968", "linked_nts": [ "///a/967", "///a/969" ], "nt_type": "RNA", "dbn": ".", "summary": "syn", "alpha": 179.352, "beta": -173.066, "gamma": 57.101, "delta": 145.785, "epsilon": -98.192, "zeta": 65.250, "epsilon_zeta": 196.558, "bb_type": "--", "chi": 42.711, "glyco_bond": "syn", "C5prime_xyz": [ -5.691, 4.181, 0.432 ], "P_xyz": [ -6.355, 1.996, -0.820 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 66.216, "theta": 93.822, "eta_prime": 118.037, "theta_prime": 50.301, "eta_base": 79.065, "theta_base": -6.227, "v0": -27.871, "v1": 41.415, "v2": -38.163, "v3": 23.194, "v4": 2.698, "amplitude": 41.325, "phase_angle": 157.442, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.036, "frame": { "rmsd": 0.013, "origin": [ 298.244, 178.844, 232.158 ], "x_axis": [ -0.772, -0.275, -0.573 ], "y_axis": [ 0.361, 0.553, -0.751 ], "z_axis": [ 0.524, -0.787, -0.327 ], "quaternion": [ 0.337, 0.026, 0.814, -0.472 ] } }, { "index": 968, "index_chain": 968, "chain_name": "a", "nt_resnum": 969, "nt_name": "A", "nt_code": "A", "nt_id": "///a/969", "linked_nts": [ "///a/968", "///a/970" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-stack", "alpha": 151.620, "beta": -164.159, "gamma": -17.619, "delta": 150.710, "epsilon": -127.448, "zeta": 75.330, "epsilon_zeta": 157.222, "bb_type": "--", "chi": 45.429, "glyco_bond": "syn", "C5prime_xyz": [ -5.426, 3.822, 0.485 ], "P_xyz": [ -7.336, 2.572, -0.780 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 17.753, "theta": 72.369, "eta_prime": 25.186, "theta_prime": 66.528, "eta_base": 66.302, "theta_base": 76.876, "v0": -21.549, "v1": 36.719, "v2": -36.961, "v3": 25.499, "v4": -2.729, "amplitude": 38.228, "phase_angle": 165.207, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.042, "frame": { "rmsd": 0.016, "origin": [ 310.587, 189.531, 233.133 ], "x_axis": [ 0.765, 0.182, 0.617 ], "y_axis": [ 0.274, -0.960, -0.056 ], "z_axis": [ 0.582, 0.212, -0.785 ], "quaternion": [ -0.072, 0.937, 0.122, 0.320 ] } }, { "index": 969, "index_chain": 969, "chain_name": "a", "nt_resnum": 970, "nt_name": "G", "nt_code": "G", "nt_id": "///a/970", "linked_nts": [ "///a/969", "///a/971" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 51.485, "beta": -172.841, "gamma": -96.036, "delta": 144.911, "epsilon": -146.359, "zeta": -147.426, "epsilon_zeta": 1.067, "bb_type": "--", "chi": -103.594, "glyco_bond": "anti", "C5prime_xyz": [ -1.621, 8.061, -2.008 ], "P_xyz": [ -0.996, 9.952, -3.685 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -161.230, "theta": -166.891, "eta_prime": -163.008, "theta_prime": 167.342, "eta_base": -143.938, "theta_base": 143.714, "v0": -15.052, "v1": 28.415, "v2": -30.295, "v3": 22.339, "v4": -4.777, "amplitude": 30.757, "phase_angle": 170.054, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 312.311, 184.565, 221.518 ], "x_axis": [ 0.939, -0.250, 0.237 ], "y_axis": [ -0.345, -0.702, 0.624 ], "z_axis": [ 0.010, -0.667, -0.745 ], "quaternion": [ 0.351, 0.920, -0.162, 0.067 ] } }, { "index": 970, "index_chain": 970, "chain_name": "a", "nt_resnum": 971, "nt_name": "A", "nt_code": "A", "nt_id": "///a/971", "linked_nts": [ "///a/970", "///a/972" ], "nt_type": "RNA", "dbn": ".", "summary": "syn", "alpha": 109.848, "beta": 101.493, "gamma": 155.667, "delta": 82.108, "epsilon": -127.496, "zeta": -108.799, "epsilon_zeta": -18.697, "bb_type": "--", "chi": 61.276, "glyco_bond": "syn", "C5prime_xyz": [ -5.246, 4.242, 1.781 ], "P_xyz": [ -5.636, 5.373, 4.086 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 41.516, "theta": 172.811, "eta_prime": 51.204, "theta_prime": 164.239, "eta_base": 83.385, "theta_base": -163.332, "v0": -3.738, "v1": -18.366, "v2": 32.179, "v3": -35.259, "v4": 24.636, "amplitude": 35.381, "phase_angle": 24.563, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.046, "frame": { "rmsd": 0.015, "origin": [ 299.603, 181.372, 218.398 ], "x_axis": [ -0.979, 0.204, 0.019 ], "y_axis": [ -0.153, -0.791, 0.592 ], "z_axis": [ 0.135, 0.576, 0.806 ], "quaternion": [ 0.094, 0.041, 0.309, 0.946 ] } }, { "index": 971, "index_chain": 971, "chain_name": "a", "nt_resnum": 972, "nt_name": "A", "nt_code": "A", "nt_id": "///a/972", "linked_nts": [ "///a/971", "///a/973" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix-end,multiplet", "alpha": 71.500, "beta": 175.973, "gamma": 60.645, "delta": 90.727, "epsilon": -89.713, "zeta": -127.174, "epsilon_zeta": 37.461, "bb_type": "--", "chi": -133.517, "glyco_bond": "anti", "C5prime_xyz": [ -1.392, 8.579, -1.018 ], "P_xyz": [ 1.168, 8.836, -1.506 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -36.432, "theta": -135.220, "eta_prime": -26.756, "theta_prime": -125.542, "eta_base": -91.914, "theta_base": -96.123, "v0": -0.808, "v1": -17.558, "v2": 28.051, "v3": -29.288, "v4": 19.090, "amplitude": 29.875, "phase_angle": 20.120, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "7d", "suiteness": 0.820, "filter_rmsd": 0.041, "frame": { "rmsd": 0.014, "origin": [ 309.911, 171.705, 212.421 ], "x_axis": [ 0.755, 0.192, 0.628 ], "y_axis": [ -0.654, 0.299, 0.695 ], "z_axis": [ -0.054, -0.935, 0.351 ], "quaternion": [ 0.775, 0.526, -0.220, 0.273 ] } }, { "index": 972, "index_chain": 972, "chain_name": "a", "nt_resnum": 973, "nt_name": "C", "nt_code": "C", "nt_id": "///a/973", "linked_nts": [ "///a/972", "///a/974" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical", "alpha": -37.106, "beta": 125.937, "gamma": 50.126, "delta": 79.245, "epsilon": -124.169, "zeta": -52.625, "epsilon_zeta": -71.545, "bb_type": "--", "chi": -160.876, "glyco_bond": "anti", "C5prime_xyz": [ -1.527, 8.879, 0.541 ], "P_xyz": [ 1.025, 8.818, 0.085 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.148, "theta": -99.493, "eta_prime": -172.402, "theta_prime": -100.188, "eta_base": -143.554, "theta_base": -58.418, "v0": -3.091, "v1": -20.426, "v2": 34.946, "v3": -37.635, "v4": 25.656, "amplitude": 38.003, "phase_angle": 23.136, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.131, "filter_rmsd": 0.064, "frame": { "rmsd": 0.007, "origin": [ 309.439, 168.003, 219.410 ], "x_axis": [ 0.278, 0.883, 0.378 ], "y_axis": [ -0.922, 0.356, -0.154 ], "z_axis": [ -0.271, -0.306, 0.913 ], "quaternion": [ 0.798, 0.048, -0.203, 0.565 ] } }, { "index": 973, "index_chain": 973, "chain_name": "a", "nt_resnum": 974, "nt_name": "C", "nt_code": "C", "nt_id": "///a/974", "linked_nts": [ "///a/973", "///a/975" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -74.109, "beta": 170.130, "gamma": 66.254, "delta": 80.386, "epsilon": -140.288, "zeta": -52.611, "epsilon_zeta": -87.677, "bb_type": "BI", "chi": -158.922, "glyco_bond": "anti", "C5prime_xyz": [ -1.423, 8.860, 0.416 ], "P_xyz": [ 1.135, 9.398, 0.264 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.548, "theta": -89.010, "eta_prime": -167.753, "theta_prime": -95.426, "eta_base": -98.357, "theta_base": -25.010, "v0": -2.002, "v1": -20.543, "v2": 33.989, "v3": -36.032, "v4": 24.016, "amplitude": 36.567, "phase_angle": 21.643, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.444, "filter_rmsd": 0.066, "frame": { "rmsd": 0.012, "origin": [ 307.260, 173.171, 223.298 ], "x_axis": [ -0.645, 0.685, -0.340 ], "y_axis": [ -0.653, -0.725, -0.221 ], "z_axis": [ -0.398, 0.079, 0.914 ], "quaternion": [ 0.369, -0.204, -0.039, 0.906 ] } }, { "index": 974, "index_chain": 974, "chain_name": "a", "nt_resnum": 975, "nt_name": "U", "nt_code": "U", "nt_id": "///a/975", "linked_nts": [ "///a/974", "///a/976" ], "nt_type": "RNA", "dbn": ".", "summary": "syn", "alpha": 164.730, "beta": -158.441, "gamma": 149.889, "delta": 83.544, "epsilon": -140.320, "zeta": 37.549, "epsilon_zeta": 182.131, "bb_type": "--", "chi": 12.651, "glyco_bond": "syn", "C5prime_xyz": [ -5.300, 3.789, -1.039 ], "P_xyz": [ -5.927, 1.637, 0.299 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 139.777, "theta": -31.514, "eta_prime": -179.161, "theta_prime": -71.798, "eta_base": -78.035, "theta_base": 143.773, "v0": 6.089, "v1": -26.572, "v2": 35.886, "v3": -33.378, "v4": 17.228, "amplitude": 36.356, "phase_angle": 9.229, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.037, "filter_rmsd": 0.111, "frame": { "rmsd": 0.015, "origin": [ 299.370, 169.266, 222.218 ], "x_axis": [ -0.312, 0.722, -0.617 ], "y_axis": [ 0.578, 0.660, 0.479 ], "z_axis": [ 0.754, -0.207, -0.624 ], "quaternion": [ 0.425, 0.403, 0.806, 0.084 ] } }, { "index": 975, "index_chain": 975, "chain_name": "a", "nt_resnum": 976, "nt_name": "U", "nt_code": "U", "nt_id": "///a/976", "linked_nts": [ "///a/975", "///a/977" ], "nt_type": "RNA", "dbn": ".", "summary": "syn", "alpha": 171.533, "beta": 169.715, "gamma": 33.353, "delta": 134.127, "epsilon": 21.463, "zeta": -75.395, "epsilon_zeta": -263.142, "bb_type": "--", "chi": 53.630, "glyco_bond": "syn", "C5prime_xyz": [ -5.335, 3.950, 1.134 ], "P_xyz": [ -5.730, 1.551, 0.173 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 53.477, "theta": 115.501, "eta_prime": 126.729, "theta_prime": 77.920, "eta_base": 36.244, "theta_base": 98.305, "v0": -19.069, "v1": 28.336, "v2": -26.454, "v3": 16.262, "v4": 1.553, "amplitude": 28.507, "phase_angle": 158.120, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "5z", "suiteness": 0.262, "filter_rmsd": 0.107, "frame": { "rmsd": 0.017, "origin": [ 300.434, 175.289, 225.988 ], "x_axis": [ -0.204, 0.548, -0.811 ], "y_axis": [ -0.664, -0.686, -0.297 ], "z_axis": [ -0.719, 0.478, 0.504 ], "quaternion": [ 0.392, -0.494, 0.058, 0.774 ] } }, { "index": 976, "index_chain": 976, "chain_name": "a", "nt_resnum": 977, "nt_name": "A", "nt_code": "A", "nt_id": "///a/977", "linked_nts": [ "///a/976", "///a/978" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -175.292, "beta": -115.780, "gamma": 125.875, "delta": 79.444, "epsilon": -114.964, "zeta": -55.861, "epsilon_zeta": -59.103, "bb_type": "--", "chi": -106.575, "glyco_bond": "anti", "C5prime_xyz": [ -2.349, 7.943, -2.385 ], "P_xyz": [ -0.530, 6.859, -3.904 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 149.359, "theta": -89.815, "eta_prime": 141.141, "theta_prime": -95.632, "eta_base": 169.247, "theta_base": -75.409, "v0": -2.388, "v1": -20.577, "v2": 34.288, "v3": -36.646, "v4": 24.591, "amplitude": 37.032, "phase_angle": 22.192, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.021, "origin": [ 296.267, 174.984, 227.788 ], "x_axis": [ -0.059, 0.091, -0.994 ], "y_axis": [ -0.558, -0.828, -0.043 ], "z_axis": [ -0.828, 0.553, 0.100 ], "quaternion": [ 0.230, -0.646, 0.181, 0.705 ] } }, { "index": 977, "index_chain": 977, "chain_name": "a", "nt_resnum": 978, "nt_name": "C", "nt_code": "C", "nt_id": "///a/978", "linked_nts": [ "///a/977", "///a/979" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end,multiplet", "alpha": -83.128, "beta": -168.464, "gamma": 61.445, "delta": 81.473, "epsilon": -142.258, "zeta": -73.899, "epsilon_zeta": -68.359, "bb_type": "BI", "chi": -150.357, "glyco_bond": "anti", "C5prime_xyz": [ -1.592, 8.860, -0.092 ], "P_xyz": [ 0.915, 9.587, 0.050 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.031, "theta": -141.748, "eta_prime": -173.778, "theta_prime": -137.042, "eta_base": -141.012, "theta_base": -106.041, "v0": -2.794, "v1": -19.479, "v2": 32.982, "v3": -35.493, "v4": 24.218, "amplitude": 35.823, "phase_angle": 22.971, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.290, "filter_rmsd": 0.063, "frame": { "rmsd": 0.009, "origin": [ 293.538, 170.773, 220.749 ], "x_axis": [ 0.767, -0.624, 0.150 ], "y_axis": [ -0.433, -0.330, 0.839 ], "z_axis": [ -0.474, -0.709, -0.523 ], "quaternion": [ 0.478, 0.809, -0.326, -0.100 ] } }, { "index": 978, "index_chain": 978, "chain_name": "a", "nt_resnum": 979, "nt_name": "C", "nt_code": "C", "nt_id": "///a/979", "linked_nts": [ "///a/978", "///a/980" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -66.813, "beta": 173.253, "gamma": 59.912, "delta": 79.463, "epsilon": -134.875, "zeta": -80.838, "epsilon_zeta": -54.037, "bb_type": "BI", "chi": -153.451, "glyco_bond": "anti", "C5prime_xyz": [ -1.537, 8.832, 0.107 ], "P_xyz": [ 1.001, 9.393, -0.146 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.208, "theta": -142.359, "eta_prime": -173.378, "theta_prime": -138.366, "eta_base": -133.486, "theta_base": -111.431, "v0": 0.104, "v1": -23.370, "v2": 36.421, "v3": -37.331, "v4": 23.476, "amplitude": 38.387, "phase_angle": 18.420, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.911, "filter_rmsd": 0.065, "frame": { "rmsd": 0.011, "origin": [ 293.113, 165.823, 218.817 ], "x_axis": [ 0.451, -0.480, 0.752 ], "y_axis": [ -0.802, 0.152, 0.578 ], "z_axis": [ -0.392, -0.864, -0.317 ], "quaternion": [ 0.567, 0.636, -0.504, 0.142 ] } }, { "index": 979, "index_chain": 979, "chain_name": "a", "nt_resnum": 980, "nt_name": "U", "nt_code": "U", "nt_id": "///a/980", "linked_nts": [ "///a/979", "///a/981" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -58.251, "beta": 172.396, "gamma": 55.249, "delta": 79.778, "epsilon": -148.584, "zeta": -27.121, "epsilon_zeta": -121.463, "bb_type": "BI", "chi": -163.253, "glyco_bond": "anti", "C5prime_xyz": [ -1.504, 8.751, 0.688 ], "P_xyz": [ 1.049, 9.291, 0.844 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.580, "theta": -115.841, "eta_prime": -174.289, "theta_prime": -129.800, "eta_base": -136.635, "theta_base": -106.323, "v0": 0.182, "v1": -23.326, "v2": 36.329, "v3": -37.072, "v4": 23.305, "amplitude": 38.253, "phase_angle": 18.250, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.838, "filter_rmsd": 0.105, "frame": { "rmsd": 0.007, "origin": [ 292.272, 160.130, 219.148 ], "x_axis": [ 0.066, 0.089, 0.994 ], "y_axis": [ -0.839, 0.543, 0.007 ], "z_axis": [ -0.539, -0.835, 0.111 ], "quaternion": [ 0.656, 0.321, -0.584, 0.354 ] } }, { "index": 980, "index_chain": 980, "chain_name": "a", "nt_resnum": 981, "nt_name": "G", "nt_code": "G", "nt_id": "///a/981", "linked_nts": [ "///a/980", "///a/982" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -141.993, "beta": 117.893, "gamma": 149.185, "delta": 79.830, "epsilon": -141.274, "zeta": -69.414, "epsilon_zeta": -71.860, "bb_type": "BI", "chi": -166.199, "glyco_bond": "anti", "C5prime_xyz": [ -1.185, 8.647, 0.862 ], "P_xyz": [ -0.841, 10.439, -1.030 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.865, "theta": 179.876, "eta_prime": 178.577, "theta_prime": -171.150, "eta_base": -135.852, "theta_base": -130.223, "v0": 3.915, "v1": -26.545, "v2": 37.878, "v3": -36.602, "v4": 20.629, "amplitude": 38.864, "phase_angle": 12.933, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 293.183, 158.074, 221.089 ], "x_axis": [ -0.277, 0.248, 0.928 ], "y_axis": [ -0.945, 0.104, -0.310 ], "z_axis": [ -0.173, -0.963, 0.206 ], "quaternion": [ 0.508, 0.321, -0.542, 0.587 ] } }, { "index": 981, "index_chain": 981, "chain_name": "a", "nt_resnum": 982, "nt_name": "G", "nt_code": "G", "nt_id": "///a/982", "linked_nts": [ "///a/981", "///a/983" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -70.282, "beta": 168.975, "gamma": 59.248, "delta": 77.173, "epsilon": -138.273, "zeta": -53.368, "epsilon_zeta": -84.906, "bb_type": "BI", "chi": -175.531, "glyco_bond": "anti", "C5prime_xyz": [ -1.342, 8.525, 1.396 ], "P_xyz": [ 1.236, 8.902, 1.564 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.900, "theta": -121.735, "eta_prime": 178.385, "theta_prime": -120.938, "eta_base": -126.140, "theta_base": -80.269, "v0": 4.487, "v1": -28.525, "v2": 40.531, "v3": -38.920, "v4": 21.639, "amplitude": 41.508, "phase_angle": 12.453, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.890, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 292.778, 155.327, 224.014 ], "x_axis": [ -0.773, 0.453, 0.445 ], "y_axis": [ -0.534, -0.084, -0.841 ], "z_axis": [ -0.343, -0.888, 0.306 ], "quaternion": [ 0.335, 0.035, -0.588, 0.735 ] } }, { "index": 982, "index_chain": 982, "chain_name": "a", "nt_resnum": 983, "nt_name": "C", "nt_code": "C", "nt_id": "///a/983", "linked_nts": [ "///a/982", "///a/984" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -76.565, "beta": -179.053, "gamma": 66.190, "delta": 75.671, "epsilon": -171.108, "zeta": -94.286, "epsilon_zeta": -76.822, "bb_type": "BI", "chi": -159.217, "glyco_bond": "anti", "C5prime_xyz": [ -1.644, 8.959, 0.409 ], "P_xyz": [ 0.810, 9.857, 0.448 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.375, "theta": -153.744, "eta_prime": -169.744, "theta_prime": -163.095, "eta_base": -105.041, "theta_base": -167.843, "v0": -4.639, "v1": -19.894, "v2": 35.498, "v3": -39.193, "v4": 27.646, "amplitude": 39.256, "phase_angle": 25.275, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.535, "filter_rmsd": 0.063, "frame": { "rmsd": 0.005, "origin": [ 289.564, 154.972, 227.141 ], "x_axis": [ -0.898, 0.286, -0.334 ], "y_axis": [ 0.128, -0.557, -0.821 ], "z_axis": [ -0.421, -0.780, 0.463 ], "quaternion": [ 0.046, -0.221, -0.469, 0.854 ] } }, { "index": 983, "index_chain": 983, "chain_name": "a", "nt_resnum": 984, "nt_name": "C", "nt_code": "C", "nt_id": "///a/984", "linked_nts": [ "///a/983", "///a/985" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end,stem-end", "alpha": 148.443, "beta": -149.752, "gamma": -176.590, "delta": 82.951, "epsilon": -105.949, "zeta": -97.632, "epsilon_zeta": -8.317, "bb_type": "--", "chi": -171.127, "glyco_bond": "anti", "C5prime_xyz": [ -1.352, 8.692, 1.184 ], "P_xyz": [ 0.287, 10.242, -0.121 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.217, "theta": -159.446, "eta_prime": 179.113, "theta_prime": -145.612, "eta_base": -177.576, "theta_base": -120.494, "v0": -0.609, "v1": -21.071, "v2": 33.453, "v3": -34.722, "v4": 22.293, "amplitude": 35.499, "phase_angle": 19.546, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.508, "filter_rmsd": 0.068, "frame": { "rmsd": 0.011, "origin": [ 289.510, 154.352, 230.888 ], "x_axis": [ -0.844, 0.173, -0.508 ], "y_axis": [ 0.216, -0.758, -0.616 ], "z_axis": [ -0.492, -0.629, 0.602 ], "quaternion": [ -0.012, -0.279, -0.348, 0.895 ] } }, { "index": 984, "index_chain": 984, "chain_name": "a", "nt_resnum": 985, "nt_name": "U", "nt_code": "U", "nt_id": "///a/985", "linked_nts": [ "///a/984", "///a/986" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII", "alpha": -51.124, "beta": 154.403, "gamma": 58.859, "delta": 145.615, "epsilon": -100.495, "zeta": 146.132, "epsilon_zeta": 113.373, "bb_type": "BII", "chi": -149.139, "glyco_bond": "anti", "C5prime_xyz": [ -2.289, 8.762, 0.254 ], "P_xyz": [ 0.019, 9.325, 1.366 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -175.625, "theta": 139.880, "eta_prime": -144.180, "theta_prime": 132.003, "eta_base": -118.534, "theta_base": 162.717, "v0": -25.890, "v1": 38.994, "v2": -36.387, "v3": 22.455, "v4": 1.937, "amplitude": 39.138, "phase_angle": 158.388, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.144, "filter_rmsd": 0.100, "frame": { "rmsd": 0.006, "origin": [ 286.005, 152.065, 233.054 ], "x_axis": [ -0.096, 0.290, -0.952 ], "y_axis": [ 0.724, -0.636, -0.267 ], "z_axis": [ -0.683, -0.715, -0.149 ], "quaternion": [ 0.173, 0.650, 0.390, -0.629 ] } }, { "index": 985, "index_chain": 985, "chain_name": "a", "nt_resnum": 986, "nt_name": "U", "nt_code": "U", "nt_id": "///a/986", "linked_nts": [ "///a/985", "///a/987" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": -61.071, "beta": -152.357, "gamma": 68.487, "delta": 147.142, "epsilon": -91.907, "zeta": 79.853, "epsilon_zeta": 188.240, "bb_type": "--", "chi": -123.118, "glyco_bond": "anti", "C5prime_xyz": [ -2.514, 8.549, -1.099 ], "P_xyz": [ -0.524, 9.899, -0.079 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -78.504, "theta": 91.953, "eta_prime": -86.203, "theta_prime": 71.153, "eta_base": -116.936, "theta_base": 64.255, "v0": -26.628, "v1": 40.111, "v2": -37.382, "v3": 23.061, "v4": 2.030, "amplitude": 40.224, "phase_angle": 158.332, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "4b", "suiteness": 0.129, "filter_rmsd": 0.094, "frame": { "rmsd": 0.013, "origin": [ 292.058, 147.826, 246.709 ], "x_axis": [ -0.968, -0.176, 0.178 ], "y_axis": [ -0.121, -0.294, -0.948 ], "z_axis": [ 0.219, -0.940, 0.263 ], "quaternion": [ -0.017, 0.125, -0.594, 0.795 ] } }, { "index": 986, "index_chain": 986, "chain_name": "a", "nt_resnum": 987, "nt_name": "G", "nt_code": "G", "nt_id": "///a/987", "linked_nts": [ "///a/986", "///a/988" ], "nt_type": "RNA", "dbn": ".", "summary": "canonical,helix,multiplet", "alpha": -117.230, "beta": 168.211, "gamma": 46.519, "delta": 138.317, "epsilon": -70.855, "zeta": -144.742, "epsilon_zeta": 73.887, "bb_type": "--", "chi": 97.261, "glyco_bond": "--", "C5prime_xyz": [ -4.483, 6.193, 2.724 ], "P_xyz": [ -5.409, 4.102, 3.980 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.852, "theta": -64.344, "eta_prime": 178.571, "theta_prime": -122.647, "eta_base": 164.393, "theta_base": -135.645, "v0": -29.151, "v1": 38.581, "v2": -32.688, "v3": 16.839, "v4": 7.512, "amplitude": 37.797, "phase_angle": 149.863, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "0b", "suiteness": 0.078, "filter_rmsd": 0.027, "frame": { "rmsd": 0.027, "origin": [ 291.820, 150.774, 241.872 ], "x_axis": [ -0.981, 0.078, -0.176 ], "y_axis": [ 0.174, -0.029, -0.984 ], "z_axis": [ -0.082, -0.997, 0.014 ], "quaternion": [ -0.034, -0.091, -0.696, 0.711 ] } }, { "index": 987, "index_chain": 987, "chain_name": "a", "nt_resnum": 988, "nt_name": "A", "nt_code": "A", "nt_id": "///a/988", "linked_nts": [ "///a/987", "///a/989" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI", "alpha": 148.389, "beta": -133.210, "gamma": 65.701, "delta": 82.642, "epsilon": -144.309, "zeta": -67.878, "epsilon_zeta": -76.431, "bb_type": "BI", "chi": -173.487, "glyco_bond": "anti", "C5prime_xyz": [ -1.304, 8.469, 1.305 ], "P_xyz": [ 1.004, 8.179, 2.512 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 41.878, "theta": -132.452, "eta_prime": 102.543, "theta_prime": -128.391, "eta_base": 110.363, "theta_base": -94.727, "v0": 3.906, "v1": -25.584, "v2": 36.278, "v3": -34.974, "v4": 19.559, "amplitude": 37.180, "phase_angle": 12.642, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.036, "frame": { "rmsd": 0.011, "origin": [ 297.267, 157.603, 238.733 ], "x_axis": [ -0.949, -0.316, 0.000 ], "y_axis": [ 0.204, -0.612, -0.764 ], "z_axis": [ 0.242, -0.725, 0.645 ], "quaternion": [ -0.145, 0.068, -0.416, 0.895 ] } }, { "index": 988, "index_chain": 988, "chain_name": "a", "nt_resnum": 989, "nt_name": "C", "nt_code": "C", "nt_id": "///a/989", "linked_nts": [ "///a/988", "///a/990" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -83.267, "beta": 169.372, "gamma": 78.563, "delta": 81.726, "epsilon": -143.560, "zeta": -123.484, "epsilon_zeta": -20.075, "bb_type": "--", "chi": -157.848, "glyco_bond": "anti", "C5prime_xyz": [ -1.402, 8.814, 0.361 ], "P_xyz": [ 1.092, 9.263, -0.332 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.676, "theta": -147.074, "eta_prime": -171.835, "theta_prime": -142.932, "eta_base": -121.195, "theta_base": -123.971, "v0": 0.763, "v1": -22.854, "v2": 34.929, "v3": -35.316, "v4": 21.805, "amplitude": 36.586, "phase_angle": 17.311, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.152, "filter_rmsd": 0.065, "frame": { "rmsd": 0.007, "origin": [ 296.016, 155.841, 241.577 ], "x_axis": [ -0.583, -0.733, -0.351 ], "y_axis": [ 0.794, -0.422, -0.438 ], "z_axis": [ 0.173, -0.534, 0.828 ], "quaternion": [ -0.454, -0.053, -0.288, 0.842 ] } }, { "index": 989, "index_chain": 989, "chain_name": "a", "nt_resnum": 990, "nt_name": "A", "nt_code": "A", "nt_id": "///a/990", "linked_nts": [ "///a/989", "///a/991" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": 49.959, "beta": 124.114, "gamma": -5.519, "delta": 80.893, "epsilon": -149.582, "zeta": -79.011, "epsilon_zeta": -70.571, "bb_type": "BI", "chi": -166.715, "glyco_bond": "anti", "C5prime_xyz": [ -1.756, 8.748, 0.865 ], "P_xyz": [ 0.266, 8.963, 2.523 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -173.876, "theta": -149.351, "eta_prime": -171.799, "theta_prime": -145.199, "eta_base": -151.805, "theta_base": -119.923, "v0": -3.157, "v1": -19.377, "v2": 33.208, "v3": -35.911, "v4": 24.674, "amplitude": 36.202, "phase_angle": 23.465, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.037, "frame": { "rmsd": 0.005, "origin": [ 296.224, 150.744, 247.199 ], "x_axis": [ -0.385, -0.298, -0.873 ], "y_axis": [ 0.768, 0.421, -0.483 ], "z_axis": [ 0.511, -0.857, 0.067 ], "quaternion": [ 0.525, 0.178, 0.659, -0.508 ] } }, { "index": 990, "index_chain": 990, "chain_name": "a", "nt_resnum": 991, "nt_name": "U", "nt_code": "U", "nt_id": "///a/991", "linked_nts": [ "///a/990", "///a/992" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": -61.478, "beta": 166.892, "gamma": 53.552, "delta": 77.334, "epsilon": -147.544, "zeta": -72.956, "epsilon_zeta": -74.588, "bb_type": "BI", "chi": -161.160, "glyco_bond": "anti", "C5prime_xyz": [ -1.572, 8.802, 0.560 ], "P_xyz": [ 0.971, 9.412, 0.567 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.012, "theta": -147.601, "eta_prime": 177.565, "theta_prime": -149.772, "eta_base": -146.257, "theta_base": -141.288, "v0": -0.481, "v1": -23.563, "v2": 37.387, "v3": -38.633, "v4": 24.618, "amplitude": 39.600, "phase_angle": 19.244, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.915, "filter_rmsd": 0.106, "frame": { "rmsd": 0.005, "origin": [ 296.463, 147.221, 248.007 ], "x_axis": [ 0.063, -0.079, -0.995 ], "y_axis": [ 0.890, 0.455, 0.021 ], "z_axis": [ 0.451, -0.887, 0.099 ], "quaternion": [ 0.636, 0.357, 0.568, -0.381 ] } }, { "index": 991, "index_chain": 991, "chain_name": "a", "nt_resnum": 992, "nt_name": "G", "nt_code": "G", "nt_id": "///a/992", "linked_nts": [ "///a/991", "///a/993" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -68.630, "beta": 166.316, "gamma": 58.293, "delta": 73.707, "epsilon": -138.845, "zeta": -71.342, "epsilon_zeta": -67.504, "bb_type": "BI", "chi": -147.799, "glyco_bond": "anti", "C5prime_xyz": [ -1.980, 8.867, -0.287 ], "P_xyz": [ 0.342, 9.751, -1.080 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.262, "theta": -142.404, "eta_prime": 172.062, "theta_prime": -138.322, "eta_base": -165.855, "theta_base": -110.720, "v0": -1.807, "v1": -23.976, "v2": 39.230, "v3": -41.318, "v4": 27.160, "amplitude": 42.017, "phase_angle": 20.984, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.801, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 295.627, 144.959, 247.865 ], "x_axis": [ 0.362, 0.109, -0.926 ], "y_axis": [ 0.926, 0.068, 0.370 ], "z_axis": [ 0.103, -0.992, -0.076 ], "quaternion": [ 0.582, 0.585, 0.442, -0.351 ] } }, { "index": 992, "index_chain": 992, "chain_name": "a", "nt_resnum": 993, "nt_name": "C", "nt_code": "C", "nt_id": "///a/993", "linked_nts": [ "///a/992", "///a/994" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -61.858, "beta": -179.190, "gamma": 59.905, "delta": 76.871, "epsilon": -142.458, "zeta": -77.227, "epsilon_zeta": -65.231, "bb_type": "BI", "chi": -155.575, "glyco_bond": "anti", "C5prime_xyz": [ -1.679, 8.914, 0.218 ], "P_xyz": [ 0.802, 9.743, 0.259 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.460, "theta": -149.355, "eta_prime": -168.821, "theta_prime": -148.042, "eta_base": -132.560, "theta_base": -126.230, "v0": -2.588, "v1": -21.423, "v2": 35.972, "v3": -38.453, "v4": 25.845, "amplitude": 38.887, "phase_angle": 22.326, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.757, "filter_rmsd": 0.063, "frame": { "rmsd": 0.004, "origin": [ 298.031, 140.677, 243.880 ], "x_axis": [ 0.719, 0.589, -0.368 ], "y_axis": [ 0.422, 0.050, 0.905 ], "z_axis": [ 0.552, -0.806, -0.213 ], "quaternion": [ 0.624, 0.686, 0.369, 0.067 ] } }, { "index": 993, "index_chain": 993, "chain_name": "a", "nt_resnum": 994, "nt_name": "U", "nt_code": "U", "nt_id": "///a/994", "linked_nts": [ "///a/993", "///a/995" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -64.194, "beta": 178.286, "gamma": 39.993, "delta": 74.954, "epsilon": -139.683, "zeta": -87.275, "epsilon_zeta": -52.408, "bb_type": "BI", "chi": -158.981, "glyco_bond": "anti", "C5prime_xyz": [ -1.571, 8.786, 0.446 ], "P_xyz": [ 0.884, 9.553, 0.889 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.638, "theta": -159.939, "eta_prime": 164.413, "theta_prime": -154.317, "eta_base": -162.972, "theta_base": -130.686, "v0": 1.320, "v1": -25.687, "v2": 39.119, "v3": -39.341, "v4": 23.886, "amplitude": 40.851, "phase_angle": 16.743, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.621, "filter_rmsd": 0.105, "frame": { "rmsd": 0.007, "origin": [ 300.265, 138.357, 241.676 ], "x_axis": [ 0.468, 0.855, 0.226 ], "y_axis": [ 0.032, -0.272, 0.962 ], "z_axis": [ 0.883, -0.442, -0.155 ], "quaternion": [ 0.510, 0.688, 0.322, 0.403 ] } }, { "index": 994, "index_chain": 994, "chain_name": "a", "nt_resnum": 995, "nt_name": "G", "nt_code": "G", "nt_id": "///a/995", "linked_nts": [ "///a/994", "///a/996" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -60.692, "beta": 152.148, "gamma": 72.837, "delta": 77.358, "epsilon": -139.856, "zeta": -72.804, "epsilon_zeta": -67.051, "bb_type": "BI", "chi": -168.654, "glyco_bond": "anti", "C5prime_xyz": [ -1.446, 8.675, 1.001 ], "P_xyz": [ 0.993, 9.228, 0.224 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.533, "theta": -139.606, "eta_prime": -175.121, "theta_prime": -140.507, "eta_base": -143.278, "theta_base": -105.908, "v0": 3.200, "v1": -26.881, "v2": 39.168, "v3": -38.262, "v4": 22.132, "amplitude": 40.388, "phase_angle": 14.116, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.313, "filter_rmsd": 0.008, "frame": { "rmsd": 0.008, "origin": [ 304.134, 137.691, 239.827 ], "x_axis": [ 0.385, 0.681, 0.623 ], "y_axis": [ -0.148, -0.621, 0.770 ], "z_axis": [ 0.911, -0.389, -0.138 ], "quaternion": [ 0.396, 0.732, 0.182, 0.524 ] } }, { "index": 995, "index_chain": 995, "chain_name": "a", "nt_resnum": 996, "nt_name": "A", "nt_code": "A", "nt_id": "///a/996", "linked_nts": [ "///a/995", "///a/997" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -61.679, "beta": 166.107, "gamma": 59.433, "delta": 80.636, "epsilon": -115.594, "zeta": -140.990, "epsilon_zeta": 25.396, "bb_type": "--", "chi": -175.109, "glyco_bond": "anti", "C5prime_xyz": [ -1.572, 8.466, 1.411 ], "P_xyz": [ 1.007, 8.848, 1.670 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.889, "theta": -140.757, "eta_prime": -169.381, "theta_prime": -143.632, "eta_base": -117.680, "theta_base": -122.281, "v0": 3.280, "v1": -25.684, "v2": 37.095, "v3": -36.196, "v4": 20.762, "amplitude": 38.194, "phase_angle": 13.778, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.876, "filter_rmsd": 0.036, "frame": { "rmsd": 0.009, "origin": [ 308.370, 138.472, 240.422 ], "x_axis": [ 0.009, 0.153, 0.988 ], "y_axis": [ -0.398, -0.906, 0.144 ], "z_axis": [ 0.917, -0.395, 0.053 ], "quaternion": [ 0.197, 0.682, -0.090, 0.698 ] } }, { "index": 996, "index_chain": 996, "chain_name": "a", "nt_resnum": 997, "nt_name": "G", "nt_code": "G", "nt_id": "///a/997", "linked_nts": [ "///a/996", "///a/998" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 117.141, "beta": -103.956, "gamma": 173.849, "delta": 83.541, "epsilon": -119.646, "zeta": -65.374, "epsilon_zeta": -54.272, "bb_type": "--", "chi": 173.113, "glyco_bond": "anti", "C5prime_xyz": [ -1.369, 8.228, 2.059 ], "P_xyz": [ 0.527, 9.086, 0.472 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.257, "theta": -121.597, "eta_prime": 175.058, "theta_prime": -141.867, "eta_base": -147.981, "theta_base": -177.025, "v0": 3.875, "v1": -24.975, "v2": 35.437, "v3": -34.117, "v4": 19.077, "amplitude": 36.309, "phase_angle": 12.582, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 311.763, 138.602, 240.879 ], "x_axis": [ -0.308, -0.233, 0.923 ], "y_axis": [ -0.234, -0.921, -0.310 ], "z_axis": [ 0.922, -0.312, 0.229 ], "quaternion": [ 0.001, 0.588, -0.198, 0.784 ] } }, { "index": 997, "index_chain": 997, "chain_name": "a", "nt_resnum": 998, "nt_name": "A", "nt_code": "A", "nt_id": "///a/998", "linked_nts": [ "///a/997", "///a/999" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -56.144, "beta": 156.176, "gamma": -169.919, "delta": 81.486, "epsilon": -146.305, "zeta": -60.010, "epsilon_zeta": -86.296, "bb_type": "BI", "chi": -166.905, "glyco_bond": "anti", "C5prime_xyz": [ -1.301, 8.578, 0.894 ], "P_xyz": [ -0.918, 11.004, -0.043 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -56.613, "theta": -178.494, "eta_prime": -46.237, "theta_prime": -163.684, "eta_base": -53.136, "theta_base": -103.871, "v0": 4.691, "v1": -27.228, "v2": 38.047, "v3": -36.377, "v4": 20.017, "amplitude": 38.869, "phase_angle": 11.806, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.038, "frame": { "rmsd": 0.008, "origin": [ 322.349, 141.048, 237.302 ], "x_axis": [ 0.673, -0.347, -0.653 ], "y_axis": [ -0.543, -0.832, -0.118 ], "z_axis": [ -0.502, 0.434, -0.748 ], "quaternion": [ -0.153, 0.902, -0.247, -0.320 ] } }, { "index": 998, "index_chain": 998, "chain_name": "a", "nt_resnum": 999, "nt_name": "A", "nt_code": "A", "nt_id": "///a/999", "linked_nts": [ "///a/998", "///a/1000" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -80.609, "beta": 166.659, "gamma": 70.241, "delta": 84.952, "epsilon": -143.053, "zeta": -31.099, "epsilon_zeta": -111.954, "bb_type": "BI", "chi": -172.856, "glyco_bond": "anti", "C5prime_xyz": [ -1.157, 8.413, 1.286 ], "P_xyz": [ 1.463, 8.567, 1.124 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.152, "theta": -98.325, "eta_prime": -172.230, "theta_prime": -94.902, "eta_base": -98.217, "theta_base": -53.477, "v0": 6.690, "v1": -26.839, "v2": 35.632, "v3": -32.728, "v4": 16.505, "amplitude": 35.996, "phase_angle": 8.150, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.449, "filter_rmsd": 0.038, "frame": { "rmsd": 0.008, "origin": [ 322.690, 140.928, 233.012 ], "x_axis": [ -0.005, -0.894, -0.449 ], "y_axis": [ -0.896, -0.195, 0.399 ], "z_axis": [ -0.444, 0.404, -0.800 ], "quaternion": [ -0.002, 0.705, -0.634, -0.316 ] } }, { "index": 999, "index_chain": 999, "chain_name": "a", "nt_resnum": 1000, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1000", "linked_nts": [ "///a/999", "///a/1001" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix", "alpha": -95.858, "beta": 164.448, "gamma": 89.775, "delta": 84.160, "epsilon": -132.093, "zeta": -73.831, "epsilon_zeta": -58.261, "bb_type": "BI", "chi": -162.436, "glyco_bond": "anti", "C5prime_xyz": [ -1.264, 8.726, 0.719 ], "P_xyz": [ 1.198, 9.123, -0.122 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.743, "theta": -132.642, "eta_prime": -151.004, "theta_prime": -133.925, "eta_base": -73.021, "theta_base": -93.098, "v0": 2.714, "v1": -23.833, "v2": 34.602, "v3": -33.959, "v4": 19.716, "amplitude": 35.707, "phase_angle": 14.291, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.070, "frame": { "rmsd": 0.010, "origin": [ 318.337, 137.004, 229.058 ], "x_axis": [ -0.953, -0.303, 0.019 ], "y_axis": [ -0.263, 0.854, 0.449 ], "z_axis": [ -0.152, 0.423, -0.893 ], "quaternion": [ -0.044, -0.147, 0.962, 0.227 ] } }, { "index": 1000, "index_chain": 1000, "chain_name": "a", "nt_resnum": 1001, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1001", "linked_nts": [ "///a/1000", "///a/1002" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -68.695, "beta": 167.232, "gamma": 57.509, "delta": 84.318, "epsilon": -144.812, "zeta": -46.859, "epsilon_zeta": -97.953, "bb_type": "BI", "chi": -167.397, "glyco_bond": "anti", "C5prime_xyz": [ -1.240, 8.612, 0.954 ], "P_xyz": [ 1.373, 8.732, 1.208 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.232, "theta": -119.719, "eta_prime": -177.770, "theta_prime": -131.269, "eta_base": -116.954, "theta_base": -122.817, "v0": 3.321, "v1": -23.956, "v2": 34.366, "v3": -33.351, "v4": 18.931, "amplitude": 35.314, "phase_angle": 13.302, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.813, "filter_rmsd": 0.111, "frame": { "rmsd": 0.012, "origin": [ 314.993, 138.290, 226.098 ], "x_axis": [ -0.700, 0.286, 0.655 ], "y_axis": [ 0.565, 0.782, 0.263 ], "z_axis": [ -0.437, 0.554, -0.709 ], "quaternion": [ -0.306, 0.238, 0.893, 0.229 ] } }, { "index": 1001, "index_chain": 1001, "chain_name": "a", "nt_resnum": 1002, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1002", "linked_nts": [ "///a/1001", "///a/1003" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -131.946, "beta": 139.768, "gamma": 130.490, "delta": 80.138, "epsilon": -173.894, "zeta": 152.733, "epsilon_zeta": 33.372, "bb_type": "--", "chi": -147.256, "glyco_bond": "anti", "C5prime_xyz": [ -1.743, 8.812, -0.240 ], "P_xyz": [ -0.934, 9.741, -2.566 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.230, "theta": 41.782, "eta_prime": -177.764, "theta_prime": 37.225, "eta_base": -146.680, "theta_base": 34.755, "v0": -1.329, "v1": -21.363, "v2": 34.604, "v3": -36.319, "v4": 23.708, "amplitude": 36.964, "phase_angle": 20.583, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.104, "frame": { "rmsd": 0.003, "origin": [ 313.429, 137.598, 225.642 ], "x_axis": [ -0.636, 0.564, 0.527 ], "y_axis": [ 0.356, 0.820, -0.448 ], "z_axis": [ -0.685, -0.098, -0.722 ], "quaternion": [ -0.340, 0.258, 0.891, -0.153 ] } }, { "index": 1002, "index_chain": 1002, "chain_name": "a", "nt_resnum": 1003, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1003", "linked_nts": [ "///a/1002", "///a/1004" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": -57.303, "beta": 111.248, "gamma": 34.827, "delta": 89.656, "epsilon": -71.352, "zeta": -30.565, "epsilon_zeta": -40.787, "bb_type": "--", "chi": -103.370, "glyco_bond": "anti", "C5prime_xyz": [ -2.682, 7.823, -2.538 ], "P_xyz": [ -0.208, 7.489, -3.341 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.731, "theta": -3.124, "eta_prime": 177.847, "theta_prime": -8.166, "eta_base": -178.950, "theta_base": 14.577, "v0": -8.363, "v1": -11.092, "v2": 24.811, "v3": -30.254, "v4": 24.456, "amplitude": 30.014, "phase_angle": 34.244, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "9a", "suiteness": 0.041, "filter_rmsd": 0.099, "frame": { "rmsd": 0.008, "origin": [ 322.579, 142.367, 221.236 ], "x_axis": [ 0.038, -0.987, 0.159 ], "y_axis": [ -0.651, -0.145, -0.745 ], "z_axis": [ 0.758, -0.075, -0.648 ], "quaternion": [ -0.248, 0.677, -0.605, 0.339 ] } }, { "index": 1003, "index_chain": 1003, "chain_name": "a", "nt_resnum": 1004, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1004", "linked_nts": [ "///a/1003", "///a/1005" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -108.073, "beta": -124.368, "gamma": 57.444, "delta": 77.761, "epsilon": -162.447, "zeta": -79.893, "epsilon_zeta": -82.554, "bb_type": "BI", "chi": -151.572, "glyco_bond": "anti", "C5prime_xyz": [ -1.929, 8.922, -0.068 ], "P_xyz": [ 0.297, 9.682, 1.056 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 142.782, "theta": -165.625, "eta_prime": 174.662, "theta_prime": -165.936, "eta_base": -167.585, "theta_base": -166.577, "v0": -4.806, "v1": -19.839, "v2": 35.369, "v3": -39.064, "v4": 27.632, "amplitude": 39.151, "phase_angle": 25.389, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.057, "frame": { "rmsd": 0.010, "origin": [ 307.778, 142.071, 218.190 ], "x_axis": [ 0.239, 0.742, 0.627 ], "y_axis": [ 0.869, 0.125, -0.479 ], "z_axis": [ -0.434, 0.659, -0.614 ], "quaternion": [ -0.433, 0.657, 0.612, 0.073 ] } }, { "index": 1004, "index_chain": 1004, "chain_name": "a", "nt_resnum": 1005, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1005", "linked_nts": [ "///a/1004", "///a/1006" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -72.083, "beta": 159.253, "gamma": 70.538, "delta": 77.138, "epsilon": -151.511, "zeta": -71.515, "epsilon_zeta": -79.997, "bb_type": "BI", "chi": -153.796, "glyco_bond": "anti", "C5prime_xyz": [ -1.741, 8.956, 0.072 ], "P_xyz": [ 0.640, 9.712, -0.746 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.301, "theta": -149.455, "eta_prime": 173.400, "theta_prime": -152.568, "eta_base": -179.411, "theta_base": -122.774, "v0": -3.205, "v1": -20.921, "v2": 35.632, "v3": -38.341, "v4": 26.223, "amplitude": 38.747, "phase_angle": 23.132, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.450, "filter_rmsd": 0.063, "frame": { "rmsd": 0.005, "origin": [ 304.955, 142.345, 217.058 ], "x_axis": [ 0.444, 0.744, 0.500 ], "y_axis": [ 0.628, 0.140, -0.766 ], "z_axis": [ -0.639, 0.654, -0.405 ], "quaternion": [ 0.543, -0.654, -0.525, 0.053 ] } }, { "index": 1005, "index_chain": 1005, "chain_name": "a", "nt_resnum": 1006, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1006", "linked_nts": [ "///a/1005", "///a/1007" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -68.110, "beta": 170.559, "gamma": 53.954, "delta": 77.514, "epsilon": -115.455, "zeta": -85.298, "epsilon_zeta": -30.157, "bb_type": "--", "chi": -166.205, "glyco_bond": "anti", "C5prime_xyz": [ -1.556, 8.716, 0.862 ], "P_xyz": [ 0.975, 9.319, 1.156 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.520, "theta": -134.282, "eta_prime": 178.966, "theta_prime": -129.146, "eta_base": -139.347, "theta_base": -79.253, "v0": 0.272, "v1": -23.775, "v2": 36.985, "v3": -37.828, "v4": 23.663, "amplitude": 38.935, "phase_angle": 18.209, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.918, "filter_rmsd": 0.039, "frame": { "rmsd": 0.008, "origin": [ 303.009, 145.576, 216.988 ], "x_axis": [ 0.898, 0.425, 0.112 ], "y_axis": [ 0.257, -0.303, -0.918 ], "z_axis": [ -0.356, 0.853, -0.381 ], "quaternion": [ 0.551, -0.803, -0.212, 0.076 ] } }, { "index": 1006, "index_chain": 1006, "chain_name": "a", "nt_resnum": 1007, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1007", "linked_nts": [ "///a/1006", "///a/1008" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -59.388, "beta": 146.404, "gamma": 61.257, "delta": 81.444, "epsilon": -125.625, "zeta": -69.396, "epsilon_zeta": -56.229, "bb_type": "--", "chi": -168.855, "glyco_bond": "anti", "C5prime_xyz": [ -1.488, 8.645, 1.028 ], "P_xyz": [ 1.077, 8.930, 0.641 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.133, "theta": -100.378, "eta_prime": -178.637, "theta_prime": -152.177, "eta_base": -113.603, "theta_base": 151.013, "v0": 1.219, "v1": -23.287, "v2": 35.253, "v3": -35.564, "v4": 21.672, "amplitude": 36.822, "phase_angle": 16.787, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.787, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 304.832, 149.105, 215.610 ], "x_axis": [ 0.848, -0.204, -0.489 ], "y_axis": [ -0.529, -0.395, -0.751 ], "z_axis": [ -0.040, 0.896, -0.443 ], "quaternion": [ 0.503, -0.819, 0.224, 0.161 ] } }, { "index": 1007, "index_chain": 1007, "chain_name": "a", "nt_resnum": 1008, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1008", "linked_nts": [ "///a/1007", "///a/1009" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": 162.922, "beta": 145.707, "gamma": 55.230, "delta": 85.058, "epsilon": -108.620, "zeta": -77.105, "epsilon_zeta": -31.515, "bb_type": "--", "chi": -133.900, "glyco_bond": "anti", "C5prime_xyz": [ -1.329, 8.538, -1.017 ], "P_xyz": [ 1.055, 8.212, -2.033 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 15.239, "theta": -121.264, "eta_prime": 48.928, "theta_prime": -127.487, "eta_base": 29.738, "theta_base": -103.454, "v0": 4.385, "v1": -24.872, "v2": 34.643, "v3": -33.055, "v4": 18.180, "amplitude": 35.372, "phase_angle": 11.648, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.789, "filter_rmsd": 0.038, "frame": { "rmsd": 0.010, "origin": [ 293.529, 155.149, 215.230 ], "x_axis": [ -0.375, -0.911, 0.171 ], "y_axis": [ 0.767, -0.409, -0.494 ], "z_axis": [ 0.520, -0.054, 0.852 ], "quaternion": [ 0.517, -0.213, 0.169, -0.812 ] } }, { "index": 1008, "index_chain": 1008, "chain_name": "a", "nt_resnum": 1009, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1009", "linked_nts": [ "///a/1008", "///a/1010" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -91.126, "beta": 127.288, "gamma": 96.334, "delta": 83.493, "epsilon": -147.864, "zeta": -69.201, "epsilon_zeta": -78.663, "bb_type": "BI", "chi": -162.963, "glyco_bond": "anti", "C5prime_xyz": [ -1.436, 8.731, 0.688 ], "P_xyz": [ 0.468, 9.183, -1.050 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 146.514, "theta": -142.611, "eta_prime": 175.193, "theta_prime": -150.864, "eta_base": -139.885, "theta_base": -105.831, "v0": 1.157, "v1": -23.003, "v2": 34.709, "v3": -35.005, "v4": 21.369, "amplitude": 36.252, "phase_angle": 16.782, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 294.955, 152.255, 217.545 ], "x_axis": [ -0.272, -0.758, -0.592 ], "y_axis": [ 0.905, 0.007, -0.425 ], "z_axis": [ 0.326, -0.652, 0.685 ], "quaternion": [ 0.596, 0.095, 0.386, -0.698 ] } }, { "index": 1009, "index_chain": 1009, "chain_name": "a", "nt_resnum": 1010, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1010", "linked_nts": [ "///a/1009", "///a/1011" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -73.625, "beta": 167.574, "gamma": 63.411, "delta": 86.550, "epsilon": -107.883, "zeta": -51.332, "epsilon_zeta": -56.551, "bb_type": "--", "chi": -155.247, "glyco_bond": "anti", "C5prime_xyz": [ -1.158, 8.635, 0.259 ], "P_xyz": [ 1.443, 8.730, -0.081 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.818, "theta": -93.033, "eta_prime": -168.654, "theta_prime": -85.554, "eta_base": -108.140, "theta_base": -44.027, "v0": 4.203, "v1": -23.936, "v2": 33.465, "v3": -31.960, "v4": 17.603, "amplitude": 34.181, "phase_angle": 11.751, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.753, "filter_rmsd": 0.038, "frame": { "rmsd": 0.009, "origin": [ 295.486, 148.832, 218.230 ], "x_axis": [ 0.468, -0.533, -0.705 ], "y_axis": [ 0.869, 0.422, 0.258 ], "z_axis": [ 0.159, -0.733, 0.661 ], "quaternion": [ 0.799, 0.310, 0.271, -0.439 ] } }, { "index": 1010, "index_chain": 1010, "chain_name": "a", "nt_resnum": 1011, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1011", "linked_nts": [ "///a/1010", "///a/1012" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -76.600, "beta": 139.799, "gamma": 97.308, "delta": 79.501, "epsilon": -138.848, "zeta": -75.478, "epsilon_zeta": -63.371, "bb_type": "BI", "chi": -150.391, "glyco_bond": "anti", "C5prime_xyz": [ -1.630, 8.772, -0.058 ], "P_xyz": [ 0.118, 9.185, -1.967 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.912, "theta": -145.260, "eta_prime": -153.740, "theta_prime": -150.806, "eta_base": -84.354, "theta_base": -120.476, "v0": 1.089, "v1": -24.085, "v2": 36.670, "v3": -36.995, "v4": 22.706, "amplitude": 38.347, "phase_angle": 17.010, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.104, "frame": { "rmsd": 0.005, "origin": [ 302.087, 146.552, 216.251 ], "x_axis": [ 0.990, 0.122, -0.073 ], "y_axis": [ 0.041, 0.249, 0.968 ], "z_axis": [ 0.136, -0.961, 0.241 ], "quaternion": [ 0.787, 0.612, 0.066, 0.026 ] } }, { "index": 1011, "index_chain": 1011, "chain_name": "a", "nt_resnum": 1012, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1012", "linked_nts": [ "///a/1011", "///a/1013" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -58.037, "beta": 168.180, "gamma": 50.090, "delta": 78.643, "epsilon": -142.583, "zeta": -73.058, "epsilon_zeta": -69.524, "bb_type": "BI", "chi": -168.057, "glyco_bond": "anti", "C5prime_xyz": [ -1.451, 8.714, 0.973 ], "P_xyz": [ 1.094, 9.183, 1.341 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.658, "theta": -142.913, "eta_prime": -179.890, "theta_prime": -141.389, "eta_base": -132.119, "theta_base": -118.345, "v0": 1.099, "v1": -24.502, "v2": 37.355, "v3": -37.689, "v4": 23.064, "amplitude": 39.062, "phase_angle": 17.002, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.897, "filter_rmsd": 0.008, "frame": { "rmsd": 0.008, "origin": [ 305.300, 143.011, 217.128 ], "x_axis": [ 0.623, 0.678, 0.392 ], "y_axis": [ -0.649, 0.168, 0.742 ], "z_axis": [ 0.437, -0.716, 0.544 ], "quaternion": [ 0.764, 0.477, 0.015, 0.434 ] } }, { "index": 1012, "index_chain": 1012, "chain_name": "a", "nt_resnum": 1013, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1013", "linked_nts": [ "///a/1012", "///a/1014" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -64.681, "beta": 166.189, "gamma": 60.405, "delta": 77.863, "epsilon": -162.442, "zeta": -85.122, "epsilon_zeta": -77.320, "bb_type": "BI", "chi": -160.395, "glyco_bond": "anti", "C5prime_xyz": [ -1.912, 8.817, 0.475 ], "P_xyz": [ 0.548, 9.671, 0.272 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.847, "theta": -136.184, "eta_prime": -177.689, "theta_prime": -149.963, "eta_base": -138.140, "theta_base": -139.708, "v0": -1.777, "v1": -22.110, "v2": 36.131, "v3": -38.207, "v4": 25.206, "amplitude": 38.748, "phase_angle": 21.177, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.876, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 308.254, 141.574, 217.682 ], "x_axis": [ 0.217, 0.706, 0.674 ], "y_axis": [ -0.775, -0.296, 0.559 ], "z_axis": [ 0.594, -0.644, 0.483 ], "quaternion": [ 0.592, 0.507, -0.034, 0.625 ] } }, { "index": 1013, "index_chain": 1013, "chain_name": "a", "nt_resnum": 1014, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1014", "linked_nts": [ "///a/1013", "///a/1015" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 130.000, "beta": -153.147, "gamma": -155.849, "delta": 79.589, "epsilon": 172.499, "zeta": 29.202, "epsilon_zeta": 143.297, "bb_type": "--", "chi": 170.307, "glyco_bond": "anti", "C5prime_xyz": [ -1.421, 8.105, 2.170 ], "P_xyz": [ -0.199, 10.381, 1.734 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -175.868, "theta": -115.803, "eta_prime": -170.700, "theta_prime": -113.100, "eta_base": -138.184, "theta_base": -43.900, "v0": 5.160, "v1": -27.688, "v2": 38.365, "v3": -36.430, "v4": 19.755, "amplitude": 39.107, "phase_angle": 11.180, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.100, "filter_rmsd": 0.042, "frame": { "rmsd": 0.014, "origin": [ 312.702, 140.588, 218.212 ], "x_axis": [ -0.135, 0.622, 0.771 ], "y_axis": [ -0.847, -0.476, 0.236 ], "z_axis": [ 0.514, -0.621, 0.591 ], "quaternion": [ 0.495, 0.433, -0.130, 0.742 ] } }, { "index": 1014, "index_chain": 1014, "chain_name": "a", "nt_resnum": 1015, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1015", "linked_nts": [ "///a/1014", "///a/1016" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -156.240, "beta": 178.224, "gamma": 72.180, "delta": 79.540, "epsilon": -155.796, "zeta": 172.289, "epsilon_zeta": 31.915, "bb_type": "--", "chi": -153.102, "glyco_bond": "anti", "C5prime_xyz": [ -1.746, 8.816, 0.061 ], "P_xyz": [ 0.705, 9.581, -0.425 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 121.828, "theta": 112.220, "eta_prime": 169.115, "theta_prime": 120.934, "eta_base": -89.348, "theta_base": 140.082, "v0": -1.218, "v1": -22.126, "v2": 35.728, "v3": -37.388, "v4": 24.287, "amplitude": 38.104, "phase_angle": 20.342, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.103, "frame": { "rmsd": 0.004, "origin": [ 310.627, 140.494, 223.958 ], "x_axis": [ -0.835, -0.409, 0.368 ], "y_axis": [ 0.132, -0.798, -0.588 ], "z_axis": [ 0.534, -0.443, 0.720 ], "quaternion": [ -0.148, 0.246, -0.281, 0.916 ] } }, { "index": 1015, "index_chain": 1015, "chain_name": "a", "nt_resnum": 1016, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1016", "linked_nts": [ "///a/1015", "///a/1017" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -21.574, "beta": 127.390, "gamma": 34.252, "delta": 78.893, "epsilon": -112.954, "zeta": -31.966, "epsilon_zeta": -80.988, "bb_type": "--", "chi": -161.065, "glyco_bond": "anti", "C5prime_xyz": [ -1.648, 8.765, 0.573 ], "P_xyz": [ 0.958, 8.698, 0.631 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -165.359, "theta": -86.223, "eta_prime": -176.951, "theta_prime": -86.117, "eta_base": 160.018, "theta_base": -65.397, "v0": -0.331, "v1": -22.888, "v2": 36.035, "v3": -37.292, "v4": 23.655, "amplitude": 38.133, "phase_angle": 19.093, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.106, "frame": { "rmsd": 0.005, "origin": [ 322.348, 139.983, 221.826 ], "x_axis": [ -0.615, 0.432, 0.659 ], "y_axis": [ -0.673, -0.724, -0.154 ], "z_axis": [ 0.411, -0.538, 0.736 ], "quaternion": [ 0.315, 0.305, -0.197, 0.877 ] } }, { "index": 1016, "index_chain": 1016, "chain_name": "a", "nt_resnum": 1017, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1017", "linked_nts": [ "///a/1016", "///a/1018" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix", "alpha": -105.701, "beta": 118.378, "gamma": 146.685, "delta": 82.093, "epsilon": -132.200, "zeta": -47.737, "epsilon_zeta": -84.463, "bb_type": "BI", "chi": 163.908, "glyco_bond": "anti", "C5prime_xyz": [ -1.221, 7.784, 2.514 ], "P_xyz": [ 0.021, 9.980, 1.826 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -177.865, "theta": -146.037, "eta_prime": -147.668, "theta_prime": -138.531, "eta_base": -85.382, "theta_base": -91.574, "v0": 9.102, "v1": -29.804, "v2": 38.199, "v3": -33.927, "v4": 15.681, "amplitude": 38.357, "phase_angle": 5.201, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 318.167, 138.395, 228.489 ], "x_axis": [ -0.925, -0.365, 0.109 ], "y_axis": [ 0.157, -0.626, -0.764 ], "z_axis": [ 0.347, -0.689, 0.636 ], "quaternion": [ -0.146, 0.128, -0.407, 0.893 ] } }, { "index": 1017, "index_chain": 1017, "chain_name": "a", "nt_resnum": 1018, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1018", "linked_nts": [ "///a/1017", "///a/1019" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -81.475, "beta": -157.591, "gamma": 45.806, "delta": 82.466, "epsilon": -131.325, "zeta": -91.763, "epsilon_zeta": -39.562, "bb_type": "BI", "chi": -162.232, "glyco_bond": "anti", "C5prime_xyz": [ -1.453, 8.738, 0.666 ], "P_xyz": [ 0.824, 9.262, 1.865 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.023, "theta": -145.877, "eta_prime": -176.368, "theta_prime": -130.828, "eta_base": -113.635, "theta_base": -76.933, "v0": 0.650, "v1": -22.297, "v2": 34.222, "v3": -34.816, "v4": 21.533, "amplitude": 35.902, "phase_angle": 17.596, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.356, "filter_rmsd": 0.005, "frame": { "rmsd": 0.005, "origin": [ 316.157, 135.417, 231.632 ], "x_axis": [ -0.439, -0.634, -0.637 ], "y_axis": [ 0.832, -0.020, -0.554 ], "z_axis": [ 0.339, -0.773, 0.536 ], "quaternion": [ 0.519, 0.106, 0.470, -0.706 ] } }, { "index": 1018, "index_chain": 1018, "chain_name": "a", "nt_resnum": 1019, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1019", "linked_nts": [ "///a/1018", "///a/1020" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -41.097, "beta": 150.826, "gamma": 60.573, "delta": 140.884, "epsilon": -143.095, "zeta": 110.384, "epsilon_zeta": 106.521, "bb_type": "--", "chi": -123.993, "glyco_bond": "anti", "C5prime_xyz": [ -1.664, 8.546, -1.087 ], "P_xyz": [ 0.959, 8.598, -1.080 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.784, "theta": 106.461, "eta_prime": -146.079, "theta_prime": 89.767, "eta_base": -90.543, "theta_base": 126.562, "v0": -19.459, "v1": 31.229, "v2": -30.489, "v3": 20.060, "v4": -0.532, "amplitude": 32.019, "phase_angle": 162.217, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.412, "filter_rmsd": 0.107, "frame": { "rmsd": 0.008, "origin": [ 316.532, 132.581, 231.379 ], "x_axis": [ 0.184, -0.340, -0.922 ], "y_axis": [ 0.983, 0.052, 0.177 ], "z_axis": [ -0.012, -0.939, 0.344 ], "quaternion": [ 0.628, 0.444, 0.362, -0.526 ] } }, { "index": 1019, "index_chain": 1019, "chain_name": "a", "nt_resnum": 1020, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1020", "linked_nts": [ "///a/1019", "///a/1021" ], "nt_type": "RNA", "dbn": ".", "summary": "non-canonical,helix", "alpha": -62.105, "beta": 117.783, "gamma": 69.716, "delta": 84.649, "epsilon": -116.704, "zeta": -78.336, "epsilon_zeta": -38.369, "bb_type": "--", "chi": 172.405, "glyco_bond": "--", "C5prime_xyz": [ -1.426, 8.215, 2.102 ], "P_xyz": [ 1.129, 7.954, 1.552 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -169.252, "theta": -111.898, "eta_prime": -155.753, "theta_prime": -118.359, "eta_base": -150.097, "theta_base": -72.180, "v0": 4.011, "v1": -24.289, "v2": 34.301, "v3": -32.914, "v4": 18.222, "amplitude": 35.094, "phase_angle": 12.206, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.050, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 319.182, 138.516, 242.350 ], "x_axis": [ -0.655, -0.752, 0.069 ], "y_axis": [ 0.542, -0.532, -0.651 ], "z_axis": [ 0.526, -0.389, 0.756 ], "quaternion": [ -0.377, 0.173, -0.303, 0.858 ] } }, { "index": 1020, "index_chain": 1020, "chain_name": "a", "nt_resnum": 1021, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1021", "linked_nts": [ "///a/1020", "///a/1022" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -49.947, "beta": 154.062, "gamma": 45.924, "delta": 79.485, "epsilon": -112.125, "zeta": -107.717, "epsilon_zeta": -4.408, "bb_type": "--", "chi": -162.301, "glyco_bond": "anti", "C5prime_xyz": [ -1.307, 8.765, 0.675 ], "P_xyz": [ 1.311, 8.890, 0.773 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.243, "theta": -149.559, "eta_prime": -174.838, "theta_prime": -145.174, "eta_base": -99.566, "theta_base": -133.416, "v0": 2.177, "v1": -25.006, "v2": 37.155, "v3": -36.870, "v4": 21.830, "amplitude": 38.540, "phase_angle": 15.409, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.364, "filter_rmsd": 0.070, "frame": { "rmsd": 0.010, "origin": [ 319.304, 135.138, 244.545 ], "x_axis": [ 0.111, -0.893, -0.436 ], "y_axis": [ 0.886, 0.288, -0.364 ], "z_axis": [ 0.450, -0.345, 0.823 ], "quaternion": [ 0.745, -0.006, 0.297, -0.597 ] } }, { "index": 1021, "index_chain": 1021, "chain_name": "a", "nt_resnum": 1022, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1022", "linked_nts": [ "///a/1021", "///a/1023" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -69.231, "beta": 157.040, "gamma": 52.475, "delta": 81.585, "epsilon": -118.397, "zeta": -52.485, "epsilon_zeta": -65.912, "bb_type": "--", "chi": -164.525, "glyco_bond": "anti", "C5prime_xyz": [ -1.146, 8.709, 0.807 ], "P_xyz": [ 1.478, 8.745, 0.866 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.141, "theta": -116.998, "eta_prime": 166.183, "theta_prime": -116.299, "eta_base": -177.001, "theta_base": -93.450, "v0": 2.724, "v1": -24.503, "v2": 35.824, "v3": -35.169, "v4": 20.460, "amplitude": 36.993, "phase_angle": 14.445, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.093, "filter_rmsd": 0.072, "frame": { "rmsd": 0.012, "origin": [ 320.489, 133.652, 248.201 ], "x_axis": [ 0.120, -0.292, -0.949 ], "y_axis": [ 0.774, 0.627, -0.095 ], "z_axis": [ 0.622, -0.723, 0.301 ], "quaternion": [ 0.716, 0.219, 0.549, -0.372 ] } }, { "index": 1022, "index_chain": 1022, "chain_name": "a", "nt_resnum": 1023, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1023", "linked_nts": [ "///a/1022", "///a/1024" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -96.165, "beta": 109.242, "gamma": 157.660, "delta": 146.733, "epsilon": -98.486, "zeta": -100.079, "epsilon_zeta": 1.593, "bb_type": "--", "chi": -156.346, "glyco_bond": "anti", "C5prime_xyz": [ -1.838, 8.640, 0.730 ], "P_xyz": [ -0.534, 10.223, -0.909 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -106.283, "theta": -126.166, "eta_prime": -108.541, "theta_prime": -165.451, "eta_base": -78.548, "theta_base": 140.574, "v0": -21.882, "v1": 35.732, "v2": -35.060, "v3": 23.382, "v4": -1.116, "amplitude": 36.674, "phase_angle": 162.939, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.105, "frame": { "rmsd": 0.003, "origin": [ 321.676, 130.258, 246.748 ], "x_axis": [ 0.436, 0.061, -0.898 ], "y_axis": [ 0.769, 0.494, 0.406 ], "z_axis": [ 0.468, -0.867, 0.169 ], "quaternion": [ 0.724, 0.440, 0.472, -0.244 ] } }, { "index": 1023, "index_chain": 1023, "chain_name": "a", "nt_resnum": 1024, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1024", "linked_nts": [ "///a/1023", "///a/1025" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-stack", "alpha": 160.595, "beta": 175.054, "gamma": 31.844, "delta": 79.341, "epsilon": 173.074, "zeta": 28.607, "epsilon_zeta": 144.467, "bb_type": "--", "chi": 37.942, "glyco_bond": "syn", "C5prime_xyz": [ -5.656, 4.012, 0.528 ], "P_xyz": [ -6.233, 1.472, 0.300 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -11.411, "theta": -76.383, "eta_prime": 55.211, "theta_prime": -78.246, "eta_base": 73.056, "theta_base": -68.441, "v0": -2.726, "v1": -19.728, "v2": 33.233, "v3": -35.820, "v4": 24.365, "amplitude": 36.074, "phase_angle": 22.889, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2g", "suiteness": 0.270, "filter_rmsd": 0.111, "frame": { "rmsd": 0.010, "origin": [ 318.917, 132.538, 255.470 ], "x_axis": [ -0.964, -0.207, 0.165 ], "y_axis": [ 0.264, -0.712, 0.651 ], "z_axis": [ -0.017, 0.671, 0.741 ], "quaternion": [ -0.127, 0.040, 0.357, 0.924 ] } }, { "index": 1024, "index_chain": 1024, "chain_name": "a", "nt_resnum": 1025, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1025", "linked_nts": [ "///a/1024", "///a/1026" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -131.303, "beta": -143.666, "gamma": 117.340, "delta": 146.231, "epsilon": -153.119, "zeta": 137.043, "epsilon_zeta": 69.838, "bb_type": "--", "chi": -112.064, "glyco_bond": "anti", "C5prime_xyz": [ -2.193, 8.435, -1.590 ], "P_xyz": [ 0.385, 8.593, -2.000 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -158.622, "theta": 147.051, "eta_prime": -89.591, "theta_prime": 78.827, "eta_base": -86.385, "theta_base": 70.537, "v0": -23.398, "v1": 37.216, "v2": -36.026, "v3": 23.429, "v4": -0.226, "amplitude": 37.975, "phase_angle": 161.565, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.063, "frame": { "rmsd": 0.004, "origin": [ 326.045, 130.829, 247.584 ], "x_axis": [ 0.953, 0.195, 0.234 ], "y_axis": [ -0.059, -0.635, 0.770 ], "z_axis": [ 0.299, -0.747, -0.594 ], "quaternion": [ 0.425, 0.892, 0.038, 0.149 ] } }, { "index": 1025, "index_chain": 1025, "chain_name": "a", "nt_resnum": 1026, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1026", "linked_nts": [ "///a/1025", "///a/1027" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-canonical,helix-end", "alpha": 47.923, "beta": -125.751, "gamma": 176.667, "delta": 80.138, "epsilon": -112.604, "zeta": -51.095, "epsilon_zeta": -61.509, "bb_type": "--", "chi": 49.608, "glyco_bond": "syn", "C5prime_xyz": [ -5.457, 4.042, 1.198 ], "P_xyz": [ -5.140, 3.362, 3.704 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 120.084, "theta": -123.790, "eta_prime": 110.624, "theta_prime": -117.079, "eta_base": 124.766, "theta_base": -142.013, "v0": -2.019, "v1": -20.670, "v2": 34.163, "v3": -36.277, "v4": 24.135, "amplitude": 36.759, "phase_angle": 21.662, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 321.551, 130.480, 251.182 ], "x_axis": [ 0.340, 0.676, 0.654 ], "y_axis": [ -0.517, -0.446, 0.730 ], "z_axis": [ 0.785, -0.587, 0.198 ], "quaternion": [ 0.523, 0.630, 0.063, 0.571 ] } }, { "index": 1026, "index_chain": 1026, "chain_name": "a", "nt_resnum": 1027, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1027", "linked_nts": [ "///a/1026", "///a/1028" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -79.967, "beta": 125.554, "gamma": 127.638, "delta": 82.293, "epsilon": -148.523, "zeta": -74.297, "epsilon_zeta": -74.226, "bb_type": "BI", "chi": -166.594, "glyco_bond": "anti", "C5prime_xyz": [ -1.115, 8.544, 0.894 ], "P_xyz": [ -0.073, 9.806, -1.163 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -173.302, "theta": -169.654, "eta_prime": -134.109, "theta_prime": -171.179, "eta_base": -120.455, "theta_base": -146.319, "v0": 6.808, "v1": -28.095, "v2": 37.527, "v3": -34.601, "v4": 17.624, "amplitude": 37.947, "phase_angle": 8.530, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 321.350, 133.808, 248.457 ], "x_axis": [ 0.148, -0.218, -0.965 ], "y_axis": [ -0.694, -0.718, 0.056 ], "z_axis": [ -0.705, 0.661, -0.258 ], "quaternion": [ -0.208, 0.729, -0.313, -0.573 ] } }, { "index": 1027, "index_chain": 1027, "chain_name": "a", "nt_resnum": 1028, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1028", "linked_nts": [ "///a/1027", "///a/1029" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -65.369, "beta": 166.529, "gamma": 62.063, "delta": 79.993, "epsilon": -123.750, "zeta": -88.573, "epsilon_zeta": -35.177, "bb_type": "--", "chi": -174.841, "glyco_bond": "anti", "C5prime_xyz": [ -1.386, 8.561, 1.383 ], "P_xyz": [ 1.205, 8.877, 1.573 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.479, "theta": -142.116, "eta_prime": -173.918, "theta_prime": -140.453, "eta_base": -136.736, "theta_base": -103.264, "v0": 3.265, "v1": -26.007, "v2": 37.643, "v3": -36.751, "v4": 21.116, "amplitude": 38.773, "phase_angle": 13.864, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.852, "filter_rmsd": 0.006, "frame": { "rmsd": 0.006, "origin": [ 320.287, 136.945, 246.700 ], "x_axis": [ -0.148, -0.638, -0.756 ], "y_axis": [ -0.664, -0.502, 0.554 ], "z_axis": [ -0.733, 0.584, -0.349 ], "quaternion": [ -0.011, 0.652, -0.499, -0.571 ] } }, { "index": 1028, "index_chain": 1028, "chain_name": "a", "nt_resnum": 1029, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1029", "linked_nts": [ "///a/1028", "///a/1030" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -64.308, "beta": 145.895, "gamma": 65.394, "delta": 79.146, "epsilon": -138.117, "zeta": -70.384, "epsilon_zeta": -67.734, "bb_type": "BI", "chi": -173.910, "glyco_bond": "anti", "C5prime_xyz": [ -1.348, 8.473, 1.321 ], "P_xyz": [ 1.195, 8.724, 0.764 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.444, "theta": -132.257, "eta_prime": 176.463, "theta_prime": -135.518, "eta_base": -126.333, "theta_base": -110.535, "v0": 5.662, "v1": -28.498, "v2": 39.394, "v3": -37.103, "v4": 19.815, "amplitude": 40.082, "phase_angle": 10.631, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.369, "filter_rmsd": 0.038, "frame": { "rmsd": 0.007, "origin": [ 318.317, 138.171, 244.198 ], "x_axis": [ -0.509, -0.827, -0.240 ], "y_axis": [ -0.505, 0.061, 0.861 ], "z_axis": [ -0.697, 0.560, -0.449 ], "quaternion": [ -0.161, -0.469, 0.710, 0.500 ] } }, { "index": 1029, "index_chain": 1029, "chain_name": "a", "nt_resnum": 1030, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1030", "linked_nts": [ "///a/1029", "///a/1031" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -62.772, "beta": 167.550, "gamma": 63.116, "delta": 78.054, "epsilon": -106.376, "zeta": -130.149, "epsilon_zeta": 23.772, "bb_type": "--", "chi": -171.911, "glyco_bond": "anti", "C5prime_xyz": [ -1.732, 8.657, 1.180 ], "P_xyz": [ 0.786, 9.345, 1.375 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -179.719, "theta": -125.467, "eta_prime": -166.086, "theta_prime": -128.541, "eta_base": -123.114, "theta_base": -78.683, "v0": -1.147, "v1": -22.279, "v2": 35.921, "v3": -37.602, "v4": 24.421, "amplitude": 38.300, "phase_angle": 20.298, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.793, "filter_rmsd": 0.036, "frame": { "rmsd": 0.005, "origin": [ 315.958, 138.111, 240.901 ], "x_axis": [ -0.657, -0.665, 0.356 ], "y_axis": [ -0.124, 0.560, 0.819 ], "z_axis": [ -0.744, 0.493, -0.451 ], "quaternion": [ -0.337, -0.242, 0.817, 0.402 ] } }, { "index": 1030, "index_chain": 1030, "chain_name": "a", "nt_resnum": 1031, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1031", "linked_nts": [ "///a/1030", "///a/1032" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 115.780, "beta": -105.237, "gamma": 175.467, "delta": 82.191, "epsilon": -107.254, "zeta": -101.231, "epsilon_zeta": -6.023, "bb_type": "--", "chi": -163.468, "glyco_bond": "anti", "C5prime_xyz": [ -1.182, 8.721, 0.763 ], "P_xyz": [ 0.207, 9.084, -1.428 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.064, "theta": -152.130, "eta_prime": 177.329, "theta_prime": -154.585, "eta_base": -117.650, "theta_base": -128.802, "v0": 2.368, "v1": -23.960, "v2": 35.290, "v3": -34.861, "v4": 20.509, "amplitude": 36.530, "phase_angle": 14.970, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.069, "frame": { "rmsd": 0.010, "origin": [ 312.815, 137.818, 240.962 ], "x_axis": [ -0.546, -0.194, 0.815 ], "y_axis": [ -0.023, 0.976, 0.217 ], "z_axis": [ -0.837, 0.099, -0.538 ], "quaternion": [ -0.472, -0.062, 0.875, 0.090 ] } }, { "index": 1031, "index_chain": 1031, "chain_name": "a", "nt_resnum": 1032, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1032", "linked_nts": [ "///a/1031", "///a/1033" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -56.134, "beta": 145.817, "gamma": 53.499, "delta": 81.274, "epsilon": -151.663, "zeta": -76.595, "epsilon_zeta": -75.068, "bb_type": "BI", "chi": -159.281, "glyco_bond": "anti", "C5prime_xyz": [ -1.512, 8.768, 0.468 ], "P_xyz": [ 1.084, 8.941, 0.166 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.860, "theta": -145.422, "eta_prime": 173.188, "theta_prime": -148.119, "eta_base": -144.358, "theta_base": -126.804, "v0": 0.198, "v1": -22.603, "v2": 35.125, "v3": -35.966, "v4": 22.523, "amplitude": 36.989, "phase_angle": 18.270, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.804, "filter_rmsd": 0.108, "frame": { "rmsd": 0.007, "origin": [ 309.042, 137.852, 240.203 ], "x_axis": [ -0.049, 0.331, 0.942 ], "y_axis": [ 0.180, 0.931, -0.318 ], "z_axis": [ -0.983, 0.154, -0.105 ], "quaternion": [ 0.667, -0.177, -0.722, 0.057 ] } }, { "index": 1032, "index_chain": 1032, "chain_name": "a", "nt_resnum": 1033, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1033", "linked_nts": [ "///a/1032", "///a/1034" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-stack,canonical,helix,stem", "alpha": -68.582, "beta": -174.510, "gamma": 48.320, "delta": 81.683, "epsilon": -151.574, "zeta": -75.174, "epsilon_zeta": -76.400, "bb_type": "BI", "chi": -168.331, "glyco_bond": "anti", "C5prime_xyz": [ -1.239, 8.651, 1.045 ], "P_xyz": [ 1.224, 8.879, 1.919 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.878, "theta": -151.101, "eta_prime": 175.480, "theta_prime": -149.950, "eta_base": -149.417, "theta_base": -138.873, "v0": 3.388, "v1": -25.443, "v2": 36.655, "v3": -35.631, "v4": 20.260, "amplitude": 37.695, "phase_angle": 13.488, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.894, "filter_rmsd": 0.068, "frame": { "rmsd": 0.008, "origin": [ 304.360, 137.746, 240.717 ], "x_axis": [ 0.464, 0.635, 0.617 ], "y_axis": [ 0.324, 0.527, -0.786 ], "z_axis": [ -0.824, 0.565, 0.039 ], "quaternion": [ 0.712, -0.474, -0.506, 0.109 ] } }, { "index": 1033, "index_chain": 1033, "chain_name": "a", "nt_resnum": 1034, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1034", "linked_nts": [ "///a/1033", "///a/1035" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -70.561, "beta": 166.628, "gamma": 66.613, "delta": 78.437, "epsilon": -152.986, "zeta": -74.002, "epsilon_zeta": -78.983, "bb_type": "BI", "chi": -172.335, "glyco_bond": "anti", "C5prime_xyz": [ -1.659, 8.620, 1.201 ], "P_xyz": [ 0.862, 9.320, 1.177 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.016, "theta": -150.830, "eta_prime": -179.648, "theta_prime": -150.435, "eta_base": -154.631, "theta_base": -118.991, "v0": -0.196, "v1": -23.390, "v2": 36.732, "v3": -37.807, "v4": 23.969, "amplitude": 38.813, "phase_angle": 18.844, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.680, "filter_rmsd": 0.038, "frame": { "rmsd": 0.012, "origin": [ 300.882, 137.855, 242.226 ], "x_axis": [ 0.534, 0.792, 0.298 ], "y_axis": [ 0.103, 0.288, -0.952 ], "z_axis": [ -0.839, 0.539, 0.072 ], "quaternion": [ 0.688, -0.542, -0.413, 0.250 ] } }, { "index": 1034, "index_chain": 1034, "chain_name": "a", "nt_resnum": 1035, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1035", "linked_nts": [ "///a/1034", "///a/1036" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -65.377, "beta": 178.207, "gamma": 53.942, "delta": 83.648, "epsilon": -130.993, "zeta": -86.424, "epsilon_zeta": -44.569, "bb_type": "BI", "chi": -172.004, "glyco_bond": "anti", "C5prime_xyz": [ -1.246, 8.580, 1.239 ], "P_xyz": [ 1.280, 8.724, 1.969 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.289, "theta": -142.788, "eta_prime": -174.599, "theta_prime": -139.489, "eta_base": -132.527, "theta_base": -106.677, "v0": 2.183, "v1": -22.774, "v2": 33.588, "v3": -33.254, "v4": 19.607, "amplitude": 34.790, "phase_angle": 15.106, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.948, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 298.472, 140.145, 244.255 ], "x_axis": [ 0.623, 0.685, -0.378 ], "y_axis": [ -0.217, -0.312, -0.925 ], "z_axis": [ -0.752, 0.658, -0.046 ], "quaternion": [ 0.562, -0.704, -0.166, 0.401 ] } }, { "index": 1035, "index_chain": 1035, "chain_name": "a", "nt_resnum": 1036, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1036", "linked_nts": [ "///a/1035", "///a/1037" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -63.377, "beta": 153.492, "gamma": 60.140, "delta": 81.312, "epsilon": -150.834, "zeta": -81.670, "epsilon_zeta": -69.164, "bb_type": "BI", "chi": -159.841, "glyco_bond": "anti", "C5prime_xyz": [ -1.310, 8.623, 0.502 ], "P_xyz": [ 1.236, 8.804, -0.080 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.558, "theta": -152.510, "eta_prime": 177.834, "theta_prime": -157.273, "eta_base": -132.490, "theta_base": -160.365, "v0": 5.089, "v1": -26.882, "v2": 37.273, "v3": -35.393, "v4": 19.120, "amplitude": 37.986, "phase_angle": 11.118, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.621, "filter_rmsd": 0.035, "frame": { "rmsd": 0.011, "origin": [ 296.975, 142.779, 244.554 ], "x_axis": [ 0.335, 0.443, -0.831 ], "y_axis": [ -0.671, -0.508, -0.541 ], "z_axis": [ -0.662, 0.739, 0.127 ], "quaternion": [ -0.489, 0.655, -0.087, -0.570 ] } }, { "index": 1036, "index_chain": 1036, "chain_name": "a", "nt_resnum": 1037, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1037", "linked_nts": [ "///a/1036", "///a/1038" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -70.216, "beta": 170.836, "gamma": 60.298, "delta": 79.055, "epsilon": -151.939, "zeta": -74.647, "epsilon_zeta": -77.292, "bb_type": "BI", "chi": -159.014, "glyco_bond": "anti", "C5prime_xyz": [ -1.631, 8.856, 0.426 ], "P_xyz": [ 0.895, 9.515, 0.310 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.820, "theta": -152.637, "eta_prime": 174.261, "theta_prime": -156.731, "eta_base": -175.096, "theta_base": -145.897, "v0": -1.284, "v1": -22.386, "v2": 36.176, "v3": -37.868, "v4": 24.660, "amplitude": 38.599, "phase_angle": 20.409, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.852, "filter_rmsd": 0.061, "frame": { "rmsd": 0.006, "origin": [ 296.169, 145.683, 246.988 ], "x_axis": [ 0.253, 0.122, -0.960 ], "y_axis": [ -0.821, -0.497, -0.279 ], "z_axis": [ -0.511, 0.859, -0.026 ], "quaternion": [ -0.427, 0.666, -0.263, -0.552 ] } }, { "index": 1037, "index_chain": 1037, "chain_name": "a", "nt_resnum": 1038, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1038", "linked_nts": [ "///a/1037", "///a/1039" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -84.558, "beta": 160.283, "gamma": 74.692, "delta": 78.275, "epsilon": -132.980, "zeta": -42.529, "epsilon_zeta": -90.451, "bb_type": "BI", "chi": -158.300, "glyco_bond": "anti", "C5prime_xyz": [ -1.630, 8.738, 0.386 ], "P_xyz": [ 0.750, 9.387, -0.519 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.391, "theta": -109.556, "eta_prime": 171.703, "theta_prime": -101.680, "eta_base": -163.298, "theta_base": -71.075, "v0": 1.662, "v1": -25.143, "v2": 37.785, "v3": -37.806, "v4": 22.792, "amplitude": 39.348, "phase_angle": 16.203, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.257, "filter_rmsd": 0.035, "frame": { "rmsd": 0.013, "origin": [ 296.295, 148.098, 247.389 ], "x_axis": [ -0.072, -0.106, -0.992 ], "y_axis": [ -0.972, -0.215, 0.093 ], "z_axis": [ -0.223, 0.971, -0.088 ], "quaternion": [ -0.396, 0.555, -0.486, -0.547 ] } }, { "index": 1038, "index_chain": 1038, "chain_name": "a", "nt_resnum": 1039, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1039", "linked_nts": [ "///a/1038", "///a/1040" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,multiplet", "alpha": -81.133, "beta": 150.839, "gamma": 109.321, "delta": 84.571, "epsilon": -145.217, "zeta": -69.311, "epsilon_zeta": -75.906, "bb_type": "BI", "chi": -156.165, "glyco_bond": "anti", "C5prime_xyz": [ -1.312, 8.741, 0.306 ], "P_xyz": [ 0.549, 9.306, -1.472 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -174.721, "theta": -145.116, "eta_prime": -131.201, "theta_prime": -149.758, "eta_base": -69.433, "theta_base": -123.070, "v0": 3.207, "v1": -24.370, "v2": 35.057, "v3": -34.118, "v4": 19.565, "amplitude": 36.068, "phase_angle": 13.602, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.066, "frame": { "rmsd": 0.007, "origin": [ 291.321, 150.158, 241.193 ], "x_axis": [ -0.940, 0.184, -0.286 ], "y_axis": [ -0.243, 0.226, 0.943 ], "z_axis": [ 0.238, 0.957, -0.168 ], "quaternion": [ 0.172, -0.019, 0.764, 0.622 ] } }, { "index": 1039, "index_chain": 1039, "chain_name": "a", "nt_resnum": 1040, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1040", "linked_nts": [ "///a/1039", "///a/1041" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -68.106, "beta": 164.274, "gamma": 70.531, "delta": 78.727, "epsilon": -120.971, "zeta": -70.653, "epsilon_zeta": -50.318, "bb_type": "--", "chi": -159.529, "glyco_bond": "anti", "C5prime_xyz": [ -1.514, 8.733, 0.463 ], "P_xyz": [ 0.968, 9.296, -0.148 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.904, "theta": -122.257, "eta_prime": -165.645, "theta_prime": -117.585, "eta_base": -123.336, "theta_base": -73.736, "v0": 1.171, "v1": -24.572, "v2": 37.419, "v3": -37.694, "v4": 23.029, "amplitude": 39.107, "phase_angle": 16.895, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.513, "filter_rmsd": 0.037, "frame": { "rmsd": 0.010, "origin": [ 290.520, 154.551, 239.470 ], "x_axis": [ -0.892, 0.308, 0.330 ], "y_axis": [ 0.371, 0.084, 0.925 ], "z_axis": [ 0.257, 0.948, -0.190 ], "quaternion": [ -0.025, 0.231, 0.736, 0.636 ] } }, { "index": 1040, "index_chain": 1040, "chain_name": "a", "nt_resnum": 1041, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1041", "linked_nts": [ "///a/1040", "///a/1042" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -55.636, "beta": 155.822, "gamma": 60.284, "delta": 78.617, "epsilon": -134.172, "zeta": -79.667, "epsilon_zeta": -54.505, "bb_type": "BI", "chi": -171.161, "glyco_bond": "anti", "C5prime_xyz": [ -1.419, 8.656, 1.163 ], "P_xyz": [ 1.173, 8.980, 1.075 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.461, "theta": -140.350, "eta_prime": -168.137, "theta_prime": -141.217, "eta_base": -101.851, "theta_base": -133.190, "v0": 1.330, "v1": -24.651, "v2": 37.463, "v3": -37.708, "v4": 22.914, "amplitude": 39.117, "phase_angle": 16.723, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.507, "filter_rmsd": 0.007, "frame": { "rmsd": 0.007, "origin": [ 287.826, 159.251, 242.579 ], "x_axis": [ -0.158, -0.126, 0.979 ], "y_axis": [ 0.974, -0.182, 0.133 ], "z_axis": [ 0.162, 0.975, 0.151 ], "quaternion": [ -0.450, 0.467, 0.454, 0.610 ] } }, { "index": 1041, "index_chain": 1041, "chain_name": "a", "nt_resnum": 1042, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1042", "linked_nts": [ "///a/1041", "///a/1043" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -55.085, "beta": 167.684, "gamma": 54.945, "delta": 76.243, "epsilon": -133.214, "zeta": -150.803, "epsilon_zeta": 17.588, "bb_type": "--", "chi": -161.012, "glyco_bond": "anti", "C5prime_xyz": [ -2.172, 8.888, 0.476 ], "P_xyz": [ 0.152, 10.032, 0.585 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.448, "theta": 163.624, "eta_prime": -174.974, "theta_prime": 131.268, "eta_base": -154.557, "theta_base": 141.886, "v0": -6.659, "v1": -18.365, "v2": 34.890, "v3": -39.804, "v4": 29.299, "amplitude": 39.561, "phase_angle": 28.125, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.780, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 285.846, 163.011, 243.157 ], "x_axis": [ 0.182, -0.313, 0.932 ], "y_axis": [ 0.975, -0.065, -0.212 ], "z_axis": [ 0.127, 0.947, 0.294 ], "quaternion": [ 0.594, -0.488, -0.339, -0.542 ] } }, { "index": 1042, "index_chain": 1042, "chain_name": "a", "nt_resnum": 1043, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1043", "linked_nts": [ "///a/1042", "///a/1044" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": 69.393, "beta": -149.314, "gamma": 74.696, "delta": 143.758, "epsilon": -118.357, "zeta": 108.464, "epsilon_zeta": 133.180, "bb_type": "--", "chi": -127.483, "glyco_bond": "anti", "C5prime_xyz": [ -1.973, 8.641, -0.910 ], "P_xyz": [ 0.235, 9.481, 0.201 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 6.957, "theta": 92.243, "eta_prime": 21.565, "theta_prime": 45.793, "eta_base": -12.106, "theta_base": 31.444, "v0": -23.561, "v1": 36.199, "v2": -34.383, "v3": 21.646, "v4": 0.963, "amplitude": 36.652, "phase_angle": 159.732, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "7p", "suiteness": 0.294, "filter_rmsd": 0.099, "frame": { "rmsd": 0.010, "origin": [ 297.935, 173.333, 233.979 ], "x_axis": [ 0.816, -0.134, 0.563 ], "y_axis": [ -0.523, -0.586, 0.619 ], "z_axis": [ 0.247, -0.799, -0.548 ], "quaternion": [ 0.413, 0.859, -0.191, 0.236 ] } }, { "index": 1043, "index_chain": 1043, "chain_name": "a", "nt_resnum": 1044, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1044", "linked_nts": [ "///a/1043", "///a/1045" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -73.378, "beta": -134.696, "gamma": -128.360, "delta": 84.474, "epsilon": -141.960, "zeta": -74.874, "epsilon_zeta": -67.086, "bb_type": "BI", "chi": 177.496, "glyco_bond": "anti", "C5prime_xyz": [ -1.253, 8.349, 1.827 ], "P_xyz": [ -0.531, 10.818, 1.242 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 65.624, "theta": 171.908, "eta_prime": 69.114, "theta_prime": -173.526, "eta_base": 89.302, "theta_base": -152.635, "v0": 3.361, "v1": -23.989, "v2": 34.367, "v3": -33.282, "v4": 18.904, "amplitude": 35.302, "phase_angle": 13.214, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 285.107, 167.035, 244.769 ], "x_axis": [ 0.891, -0.245, 0.383 ], "y_axis": [ 0.398, 0.015, -0.917 ], "z_axis": [ 0.218, 0.970, 0.111 ], "quaternion": [ 0.710, -0.664, -0.058, -0.226 ] } }, { "index": 1044, "index_chain": 1044, "chain_name": "a", "nt_resnum": 1045, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1045", "linked_nts": [ "///a/1044", "///a/1046" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -80.564, "beta": -172.248, "gamma": 57.118, "delta": 81.254, "epsilon": -145.039, "zeta": -69.234, "epsilon_zeta": -75.805, "bb_type": "BI", "chi": -156.575, "glyco_bond": "anti", "C5prime_xyz": [ -1.463, 8.847, 0.304 ], "P_xyz": [ 1.066, 9.455, 0.635 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.722, "theta": -140.332, "eta_prime": 175.815, "theta_prime": -138.828, "eta_base": -162.496, "theta_base": -116.121, "v0": -0.781, "v1": -21.614, "v2": 34.489, "v3": -35.855, "v4": 23.089, "amplitude": 36.644, "phase_angle": 19.750, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.734, "filter_rmsd": 0.064, "frame": { "rmsd": 0.007, "origin": [ 284.437, 169.857, 247.303 ], "x_axis": [ 0.957, -0.268, -0.114 ], "y_axis": [ -0.045, 0.250, -0.967 ], "z_axis": [ 0.288, 0.930, 0.227 ], "quaternion": [ 0.780, -0.608, 0.129, -0.071 ] } }, { "index": 1045, "index_chain": 1045, "chain_name": "a", "nt_resnum": 1046, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1046", "linked_nts": [ "///a/1045", "///a/1047" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -81.017, "beta": 172.406, "gamma": 67.692, "delta": 80.001, "epsilon": -108.057, "zeta": -74.326, "epsilon_zeta": -33.731, "bb_type": "--", "chi": -145.679, "glyco_bond": "anti", "C5prime_xyz": [ -1.961, 8.833, -0.388 ], "P_xyz": [ 0.427, 9.649, -1.056 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.437, "theta": -125.410, "eta_prime": -176.119, "theta_prime": -118.986, "eta_base": -145.443, "theta_base": -120.315, "v0": -4.066, "v1": -19.846, "v2": 34.644, "v3": -37.891, "v4": 26.539, "amplitude": 38.080, "phase_angle": 24.526, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.559, "filter_rmsd": 0.101, "frame": { "rmsd": 0.010, "origin": [ 286.342, 171.667, 248.851 ], "x_axis": [ 0.752, -0.289, -0.593 ], "y_axis": [ -0.344, 0.594, -0.727 ], "z_axis": [ 0.562, 0.750, 0.347 ], "quaternion": [ 0.821, -0.450, 0.352, 0.017 ] } }, { "index": 1046, "index_chain": 1046, "chain_name": "a", "nt_resnum": 1047, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1047", "linked_nts": [ "///a/1046", "///a/1048" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": -49.225, "beta": -127.720, "gamma": 22.573, "delta": 145.533, "epsilon": -97.921, "zeta": 66.701, "epsilon_zeta": 195.378, "bb_type": "--", "chi": -74.236, "glyco_bond": "anti", "C5prime_xyz": [ -3.446, 7.185, -2.815 ], "P_xyz": [ -2.720, 9.643, -3.396 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -145.972, "theta": 96.996, "eta_prime": -134.638, "theta_prime": 63.047, "eta_base": -141.045, "theta_base": 68.916, "v0": -27.867, "v1": 41.178, "v2": -37.865, "v3": 22.776, "v4": 2.902, "amplitude": 41.098, "phase_angle": 157.123, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1[", "suiteness": 0.010, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 293.217, 179.458, 248.574 ], "x_axis": [ 0.502, -0.424, -0.754 ], "y_axis": [ -0.723, 0.273, -0.634 ], "z_axis": [ 0.475, 0.864, -0.169 ], "quaternion": [ 0.634, -0.591, 0.485, 0.118 ] } }, { "index": 1047, "index_chain": 1047, "chain_name": "a", "nt_resnum": 1048, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1048", "linked_nts": [ "///a/1047", "///a/1049" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": 78.113, "beta": 179.704, "gamma": 36.729, "delta": 142.908, "epsilon": -146.547, "zeta": 175.689, "epsilon_zeta": 37.764, "bb_type": "--", "chi": -142.632, "glyco_bond": "anti", "C5prime_xyz": [ -1.764, 8.823, -0.112 ], "P_xyz": [ 0.037, 9.813, 1.482 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -25.620, "theta": 159.345, "eta_prime": -11.797, "theta_prime": 125.451, "eta_base": -16.667, "theta_base": 120.423, "v0": -23.554, "v1": 36.110, "v2": -34.217, "v3": 21.513, "v4": 1.085, "amplitude": 36.515, "phase_angle": 159.566, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "6p", "suiteness": 0.312, "filter_rmsd": 0.064, "frame": { "rmsd": 0.008, "origin": [ 275.411, 185.457, 250.765 ], "x_axis": [ -0.071, 0.919, -0.388 ], "y_axis": [ 0.984, 0.001, -0.178 ], "z_axis": [ -0.163, -0.395, -0.904 ], "quaternion": [ 0.080, 0.677, 0.703, -0.204 ] } }, { "index": 1048, "index_chain": 1048, "chain_name": "a", "nt_resnum": 1049, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1049", "linked_nts": [ "///a/1048", "///a/1050" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": 24.134, "beta": -145.216, "gamma": 68.597, "delta": 82.753, "epsilon": -149.441, "zeta": -76.247, "epsilon_zeta": -73.195, "bb_type": "BI", "chi": -167.326, "glyco_bond": "anti", "C5prime_xyz": [ -1.555, 8.605, 0.954 ], "P_xyz": [ 0.883, 8.747, 1.863 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -30.534, "theta": -109.909, "eta_prime": -40.399, "theta_prime": -115.595, "eta_base": -41.174, "theta_base": -84.717, "v0": 1.200, "v1": -23.542, "v2": 35.612, "v3": -35.938, "v4": 21.928, "amplitude": 37.203, "phase_angle": 16.816, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.038, "frame": { "rmsd": 0.013, "origin": [ 288.937, 173.613, 253.573 ], "x_axis": [ 0.205, -0.169, -0.964 ], "y_axis": [ -0.839, 0.478, -0.262 ], "z_axis": [ 0.505, 0.862, -0.043 ], "quaternion": [ 0.640, -0.439, 0.574, 0.262 ] } }, { "index": 1049, "index_chain": 1049, "chain_name": "a", "nt_resnum": 1050, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1050", "linked_nts": [ "///a/1049", "///a/1051" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 157.363, "beta": -151.700, "gamma": 178.686, "delta": 80.938, "epsilon": -149.653, "zeta": -77.772, "epsilon_zeta": -71.881, "bb_type": "BI", "chi": -150.412, "glyco_bond": "anti", "C5prime_xyz": [ -1.866, 8.804, -0.101 ], "P_xyz": [ -0.893, 9.979, -2.207 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.168, "theta": -176.048, "eta_prime": -168.840, "theta_prime": -173.063, "eta_base": -118.067, "theta_base": -146.781, "v0": -3.091, "v1": -19.897, "v2": 33.971, "v3": -36.711, "v4": 25.132, "amplitude": 36.989, "phase_angle": 23.304, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.802, "filter_rmsd": 0.102, "frame": { "rmsd": 0.012, "origin": [ 291.781, 174.623, 251.040 ], "x_axis": [ -0.135, 0.263, -0.955 ], "y_axis": [ -0.511, 0.807, 0.295 ], "z_axis": [ 0.849, 0.528, 0.025 ], "quaternion": [ 0.651, -0.090, 0.692, 0.297 ] } }, { "index": 1050, "index_chain": 1050, "chain_name": "a", "nt_resnum": 1051, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1051", "linked_nts": [ "///a/1050", "///a/1052" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -80.325, "beta": 170.512, "gamma": 75.651, "delta": 78.744, "epsilon": -141.535, "zeta": -54.490, "epsilon_zeta": -87.045, "bb_type": "BI", "chi": -171.219, "glyco_bond": "anti", "C5prime_xyz": [ -1.555, 8.677, 1.123 ], "P_xyz": [ 0.951, 9.357, 0.898 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.760, "theta": -124.293, "eta_prime": -176.686, "theta_prime": -122.412, "eta_base": -141.886, "theta_base": -68.038, "v0": 0.524, "v1": -24.832, "v2": 38.251, "v3": -38.932, "v4": 24.179, "amplitude": 40.170, "phase_angle": 17.781, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.264, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 296.695, 177.569, 249.812 ], "x_axis": [ -0.579, 0.471, -0.665 ], "y_axis": [ -0.543, 0.385, 0.746 ], "z_axis": [ 0.608, 0.793, 0.033 ], "quaternion": [ 0.458, -0.026, 0.695, 0.554 ] } }, { "index": 1051, "index_chain": 1051, "chain_name": "a", "nt_resnum": 1052, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1052", "linked_nts": [ "///a/1051", "///a/1053" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -81.563, "beta": 178.426, "gamma": 66.681, "delta": 81.597, "epsilon": -135.179, "zeta": -69.045, "epsilon_zeta": -66.134, "bb_type": "BI", "chi": -151.658, "glyco_bond": "anti", "C5prime_xyz": [ -1.124, 8.733, 0.038 ], "P_xyz": [ 1.459, 8.932, -0.338 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.748, "theta": -130.821, "eta_prime": -169.297, "theta_prime": -130.219, "eta_base": -93.731, "theta_base": -92.396, "v0": 4.078, "v1": -26.121, "v2": 37.035, "v3": -35.617, "v4": 19.924, "amplitude": 37.940, "phase_angle": 12.535, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.512, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 295.223, 182.201, 248.175 ], "x_axis": [ -0.712, 0.609, 0.349 ], "y_axis": [ 0.407, -0.047, 0.912 ], "z_axis": [ 0.572, 0.792, -0.215 ], "quaternion": [ 0.081, 0.371, 0.686, 0.621 ] } }, { "index": 1052, "index_chain": 1052, "chain_name": "a", "nt_resnum": 1053, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1053", "linked_nts": [ "///a/1052", "///a/1054" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -69.867, "beta": 163.345, "gamma": 61.046, "delta": 77.483, "epsilon": -148.285, "zeta": -73.038, "epsilon_zeta": -75.247, "bb_type": "BI", "chi": -154.395, "glyco_bond": "anti", "C5prime_xyz": [ -1.474, 8.828, 0.188 ], "P_xyz": [ 1.041, 9.278, -0.350 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.717, "theta": -146.835, "eta_prime": 178.520, "theta_prime": -150.266, "eta_base": -123.423, "theta_base": -142.177, "v0": 1.924, "v1": -25.734, "v2": 38.484, "v3": -38.338, "v4": 22.971, "amplitude": 40.007, "phase_angle": 15.861, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.801, "filter_rmsd": 0.069, "frame": { "rmsd": 0.014, "origin": [ 294.823, 185.812, 248.620 ], "x_axis": [ -0.433, 0.193, 0.881 ], "y_axis": [ 0.862, -0.198, 0.467 ], "z_axis": [ 0.264, 0.961, -0.081 ], "quaternion": [ -0.269, 0.460, 0.574, 0.622 ] } }, { "index": 1053, "index_chain": 1053, "chain_name": "a", "nt_resnum": 1054, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1054", "linked_nts": [ "///a/1053", "///a/1055" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -105.344, "beta": 167.982, "gamma": 96.300, "delta": 78.563, "epsilon": -153.035, "zeta": -77.270, "epsilon_zeta": -75.765, "bb_type": "BI", "chi": -156.891, "glyco_bond": "anti", "C5prime_xyz": [ -1.664, 8.773, 0.317 ], "P_xyz": [ 0.514, 9.543, -0.905 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.900, "theta": -157.747, "eta_prime": 174.713, "theta_prime": -160.961, "eta_base": -161.924, "theta_base": -145.367, "v0": 0.979, "v1": -24.526, "v2": 37.476, "v3": -37.871, "v4": 23.188, "amplitude": 39.216, "phase_angle": 17.132, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.103, "frame": { "rmsd": 0.012, "origin": [ 294.053, 189.155, 247.923 ], "x_axis": [ -0.146, -0.069, 0.987 ], "y_axis": [ 0.989, -0.022, 0.145 ], "z_axis": [ 0.011, 0.997, 0.071 ], "quaternion": [ -0.475, 0.448, 0.513, 0.557 ] } }, { "index": 1054, "index_chain": 1054, "chain_name": "a", "nt_resnum": 1055, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1055", "linked_nts": [ "///a/1054", "///a/1056" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix", "alpha": -74.643, "beta": 171.881, "gamma": 76.365, "delta": 81.493, "epsilon": -131.253, "zeta": -68.758, "epsilon_zeta": -62.495, "bb_type": "BI", "chi": -164.422, "glyco_bond": "anti", "C5prime_xyz": [ -1.581, 8.804, 0.741 ], "P_xyz": [ 0.932, 9.458, 0.508 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -177.616, "theta": -128.478, "eta_prime": -170.391, "theta_prime": -125.797, "eta_base": -146.511, "theta_base": -64.544, "v0": -1.679, "v1": -21.060, "v2": 34.401, "v3": -36.333, "v4": 24.003, "amplitude": 36.885, "phase_angle": 21.148, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.259, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 292.271, 193.508, 248.453 ], "x_axis": [ 0.281, -0.220, 0.934 ], "y_axis": [ 0.955, -0.029, -0.294 ], "z_axis": [ 0.091, 0.975, 0.202 ], "quaternion": [ 0.603, -0.526, -0.349, -0.487 ] } }, { "index": 1055, "index_chain": 1055, "chain_name": "a", "nt_resnum": 1056, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1056", "linked_nts": [ "///a/1055", "///a/1057" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -65.684, "beta": 164.592, "gamma": 61.379, "delta": 81.336, "epsilon": -103.885, "zeta": -108.105, "epsilon_zeta": 4.220, "bb_type": "--", "chi": -120.581, "glyco_bond": "anti", "C5prime_xyz": [ -2.099, 8.393, -1.738 ], "P_xyz": [ 0.178, 8.652, -2.990 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.496, "theta": -149.540, "eta_prime": -165.330, "theta_prime": -146.703, "eta_base": -93.318, "theta_base": -128.725, "v0": -2.413, "v1": -19.872, "v2": 33.247, "v3": -35.598, "v4": 24.016, "amplitude": 35.958, "phase_angle": 22.390, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.761, "filter_rmsd": 0.106, "frame": { "rmsd": 0.011, "origin": [ 294.162, 194.408, 251.043 ], "x_axis": [ 0.847, -0.079, 0.526 ], "y_axis": [ 0.426, 0.693, -0.581 ], "z_axis": [ -0.319, 0.716, 0.620 ], "quaternion": [ 0.889, -0.365, -0.238, -0.142 ] } }, { "index": 1056, "index_chain": 1056, "chain_name": "a", "nt_resnum": 1057, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1057", "linked_nts": [ "///a/1056", "///a/1058" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix", "alpha": -68.868, "beta": 122.825, "gamma": 80.966, "delta": 80.341, "epsilon": -116.813, "zeta": 5.489, "epsilon_zeta": 237.698, "bb_type": "--", "chi": -150.754, "glyco_bond": "anti", "C5prime_xyz": [ -1.698, 8.886, -0.057 ], "P_xyz": [ 0.291, 8.913, -1.730 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.037, "theta": -31.826, "eta_prime": 178.896, "theta_prime": -74.184, "eta_base": -159.378, "theta_base": -118.277, "v0": -2.835, "v1": -20.468, "v2": 34.656, "v3": -37.241, "v4": 25.306, "amplitude": 37.603, "phase_angle": 22.835, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.335, "filter_rmsd": 0.060, "frame": { "rmsd": 0.009, "origin": [ 295.186, 199.209, 253.582 ], "x_axis": [ 0.949, -0.312, -0.055 ], "y_axis": [ 0.132, 0.548, -0.826 ], "z_axis": [ 0.288, 0.776, 0.561 ], "quaternion": [ 0.874, -0.458, 0.098, -0.127 ] } }, { "index": 1057, "index_chain": 1057, "chain_name": "a", "nt_resnum": 1058, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1058", "linked_nts": [ "///a/1057", "///a/1059" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,helix-end", "alpha": 166.153, "beta": 159.010, "gamma": 71.507, "delta": 147.467, "epsilon": -109.118, "zeta": 153.196, "epsilon_zeta": 97.687, "bb_type": "BII", "chi": -141.591, "glyco_bond": "anti", "C5prime_xyz": [ -1.738, 8.762, -0.070 ], "P_xyz": [ 0.790, 9.074, 0.514 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 56.865, "theta": 179.819, "eta_prime": 118.544, "theta_prime": 144.768, "eta_base": 114.249, "theta_base": 141.631, "v0": -22.342, "v1": 36.929, "v2": -36.567, "v3": 24.625, "v4": -1.644, "amplitude": 38.107, "phase_angle": 163.657, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 297.577, 201.222, 254.710 ], "x_axis": [ -0.924, 0.096, 0.370 ], "y_axis": [ -0.184, 0.736, -0.651 ], "z_axis": [ -0.335, -0.670, -0.663 ], "quaternion": [ -0.193, -0.024, 0.911, -0.362 ] } }, { "index": 1058, "index_chain": 1058, "chain_name": "a", "nt_resnum": 1059, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1059", "linked_nts": [ "///a/1058", "///a/1060" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BII", "alpha": 52.073, "beta": -101.566, "gamma": -78.340, "delta": 145.582, "epsilon": -139.896, "zeta": 164.420, "epsilon_zeta": 55.684, "bb_type": "BII", "chi": -140.204, "glyco_bond": "anti", "C5prime_xyz": [ -2.341, 8.745, -0.254 ], "P_xyz": [ -3.326, 10.827, -1.523 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -66.269, "theta": 67.556, "eta_prime": -94.105, "theta_prime": 78.993, "eta_base": -110.538, "theta_base": 63.260, "v0": -27.041, "v1": 39.898, "v2": -36.718, "v3": 22.197, "v4": 2.762, "amplitude": 39.831, "phase_angle": 157.200, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.094, "frame": { "rmsd": 0.015, "origin": [ 307.657, 203.011, 255.904 ], "x_axis": [ 0.452, -0.870, -0.200 ], "y_axis": [ -0.317, 0.053, -0.947 ], "z_axis": [ 0.834, 0.491, -0.251 ], "quaternion": [ 0.560, -0.642, 0.462, -0.247 ] } }, { "index": 1059, "index_chain": 1059, "chain_name": "a", "nt_resnum": 1060, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1060", "linked_nts": [ "///a/1059", "///a/1061" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -103.906, "beta": 143.963, "gamma": 45.964, "delta": 82.717, "epsilon": -123.188, "zeta": -85.138, "epsilon_zeta": -38.049, "bb_type": "--", "chi": -142.689, "glyco_bond": "anti", "C5prime_xyz": [ -1.792, 8.869, -0.567 ], "P_xyz": [ 0.767, 9.257, -0.962 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 149.232, "theta": -132.683, "eta_prime": 136.643, "theta_prime": -123.199, "eta_base": 114.534, "theta_base": -94.729, "v0": -5.795, "v1": -15.919, "v2": 30.214, "v3": -34.434, "v4": 25.412, "amplitude": 34.262, "phase_angle": 28.134, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.257, "filter_rmsd": 0.062, "frame": { "rmsd": 0.011, "origin": [ 299.248, 202.995, 255.358 ], "x_axis": [ 0.895, -0.438, 0.085 ], "y_axis": [ 0.429, 0.794, -0.430 ], "z_axis": [ 0.121, 0.421, 0.899 ], "quaternion": [ 0.947, -0.224, 0.009, -0.229 ] } }, { "index": 1060, "index_chain": 1060, "chain_name": "a", "nt_resnum": 1061, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1061", "linked_nts": [ "///a/1060", "///a/1062" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -72.482, "beta": 162.294, "gamma": 81.822, "delta": 149.750, "epsilon": -85.731, "zeta": 122.708, "epsilon_zeta": 151.562, "bb_type": "--", "chi": -114.275, "glyco_bond": "anti", "C5prime_xyz": [ -2.065, 8.339, -1.481 ], "P_xyz": [ 0.493, 8.620, -1.944 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -156.688, "theta": 170.883, "eta_prime": -128.584, "theta_prime": 149.518, "eta_base": -105.554, "theta_base": -167.464, "v0": -22.549, "v1": 37.449, "v2": -37.195, "v3": 25.150, "v4": -1.890, "amplitude": 38.705, "phase_angle": 163.938, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.161, "filter_rmsd": 0.041, "frame": { "rmsd": 0.018, "origin": [ 302.794, 204.977, 258.140 ], "x_axis": [ 0.702, -0.125, -0.701 ], "y_axis": [ -0.083, 0.963, -0.255 ], "z_axis": [ 0.707, 0.238, 0.666 ], "quaternion": [ 0.913, -0.135, 0.386, -0.011 ] } }, { "index": 1061, "index_chain": 1061, "chain_name": "a", "nt_resnum": 1062, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1062", "linked_nts": [ "///a/1061", "///a/1063" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix-end,stem-end,multiplet", "alpha": 70.479, "beta": -109.472, "gamma": -164.042, "delta": 84.053, "epsilon": -134.940, "zeta": -72.365, "epsilon_zeta": -62.575, "bb_type": "BI", "chi": -174.996, "glyco_bond": "anti", "C5prime_xyz": [ -1.037, 8.413, 1.434 ], "P_xyz": [ 0.099, 9.764, -0.490 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -158.453, "theta": -161.040, "eta_prime": -158.883, "theta_prime": -159.498, "eta_base": -108.992, "theta_base": -129.815, "v0": 6.494, "v1": -27.225, "v2": 36.435, "v3": -33.650, "v4": 17.153, "amplitude": 36.855, "phase_angle": 8.662, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "0i", "suiteness": 0.465, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 301.519, 205.432, 265.111 ], "x_axis": [ 0.489, 0.574, 0.657 ], "y_axis": [ -0.378, 0.818, -0.433 ], "z_axis": [ -0.786, -0.036, 0.617 ], "quaternion": [ 0.855, -0.116, -0.422, 0.278 ] } }, { "index": 1062, "index_chain": 1062, "chain_name": "a", "nt_resnum": 1063, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1063", "linked_nts": [ "///a/1062", "///a/1064" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -62.900, "beta": 171.451, "gamma": 54.022, "delta": 78.777, "epsilon": -154.996, "zeta": -83.253, "epsilon_zeta": -71.743, "bb_type": "BI", "chi": -160.885, "glyco_bond": "anti", "C5prime_xyz": [ -1.413, 8.819, 0.572 ], "P_xyz": [ 1.131, 9.322, 0.780 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.585, "theta": -128.708, "eta_prime": -176.858, "theta_prime": -137.904, "eta_base": -130.656, "theta_base": -127.280, "v0": 0.028, "v1": -23.296, "v2": 36.519, "v3": -37.487, "v4": 23.646, "amplitude": 38.530, "phase_angle": 18.593, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.882, "filter_rmsd": 0.068, "frame": { "rmsd": 0.013, "origin": [ 300.383, 204.971, 268.648 ], "x_axis": [ 0.221, 0.951, 0.214 ], "y_axis": [ -0.671, 0.308, -0.674 ], "z_axis": [ -0.707, 0.005, 0.707 ], "quaternion": [ 0.748, -0.227, -0.308, 0.543 ] } }, { "index": 1063, "index_chain": 1063, "chain_name": "a", "nt_resnum": 1064, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1064", "linked_nts": [ "///a/1063", "///a/1065" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem", "alpha": 153.483, "beta": -155.445, "gamma": 178.254, "delta": 82.090, "epsilon": -148.650, "zeta": -78.845, "epsilon_zeta": -69.805, "bb_type": "BI", "chi": -160.115, "glyco_bond": "anti", "C5prime_xyz": [ -1.489, 8.743, 0.515 ], "P_xyz": [ -0.218, 10.176, -1.266 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.047, "theta": -174.865, "eta_prime": 179.474, "theta_prime": -171.184, "eta_base": -152.472, "theta_base": -146.922, "v0": 0.141, "v1": -22.279, "v2": 34.609, "v3": -35.463, "v4": 22.308, "amplitude": 36.465, "phase_angle": 18.360, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.805, "filter_rmsd": 0.102, "frame": { "rmsd": 0.014, "origin": [ 300.365, 205.104, 271.896 ], "x_axis": [ -0.029, 0.999, -0.042 ], "y_axis": [ -0.897, -0.045, -0.440 ], "z_axis": [ -0.441, 0.025, 0.897 ], "quaternion": [ 0.675, -0.172, -0.148, 0.702 ] } }, { "index": 1064, "index_chain": 1064, "chain_name": "a", "nt_resnum": 1065, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1065", "linked_nts": [ "///a/1064", "///a/1066" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -64.938, "beta": 168.437, "gamma": 64.542, "delta": 80.591, "epsilon": -152.211, "zeta": -76.067, "epsilon_zeta": -76.144, "bb_type": "BI", "chi": -155.819, "glyco_bond": "anti", "C5prime_xyz": [ -1.461, 8.852, 0.247 ], "P_xyz": [ 1.089, 9.359, -0.039 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.098, "theta": -150.554, "eta_prime": -172.782, "theta_prime": -151.012, "eta_base": -140.300, "theta_base": -129.616, "v0": -0.896, "v1": -21.986, "v2": 35.163, "v3": -36.592, "v4": 23.671, "amplitude": 37.396, "phase_angle": 19.898, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.762, "filter_rmsd": 0.062, "frame": { "rmsd": 0.014, "origin": [ 299.860, 205.895, 276.082 ], "x_axis": [ -0.453, 0.849, -0.272 ], "y_axis": [ -0.789, -0.524, -0.320 ], "z_axis": [ -0.414, 0.070, 0.908 ], "quaternion": [ 0.482, -0.202, -0.073, 0.849 ] } }, { "index": 1065, "index_chain": 1065, "chain_name": "a", "nt_resnum": 1066, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1066", "linked_nts": [ "///a/1065", "///a/1067" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -68.813, "beta": 178.684, "gamma": 56.969, "delta": 83.610, "epsilon": -129.804, "zeta": -78.273, "epsilon_zeta": -51.531, "bb_type": "BI", "chi": -165.901, "glyco_bond": "anti", "C5prime_xyz": [ -1.343, 8.779, 0.842 ], "P_xyz": [ 1.166, 9.174, 1.479 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.024, "theta": -135.943, "eta_prime": -175.766, "theta_prime": -133.659, "eta_base": -146.665, "theta_base": -89.343, "v0": -2.533, "v1": -18.913, "v2": 31.869, "v3": -34.168, "v4": 23.228, "amplitude": 34.543, "phase_angle": 22.694, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.943, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 298.680, 207.346, 280.178 ], "x_axis": [ -0.561, 0.413, -0.717 ], "y_axis": [ -0.382, -0.898, -0.218 ], "z_axis": [ -0.734, 0.151, 0.662 ], "quaternion": [ 0.225, -0.411, -0.019, 0.883 ] } }, { "index": 1066, "index_chain": 1066, "chain_name": "a", "nt_resnum": 1067, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1067", "linked_nts": [ "///a/1066", "///a/1068" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -74.247, "beta": 152.403, "gamma": 66.856, "delta": 80.292, "epsilon": -140.452, "zeta": -69.103, "epsilon_zeta": -71.348, "bb_type": "BI", "chi": -146.188, "glyco_bond": "anti", "C5prime_xyz": [ -1.685, 8.747, -0.300 ], "P_xyz": [ 0.695, 9.023, -1.348 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.463, "theta": -134.226, "eta_prime": 176.013, "theta_prime": -138.642, "eta_base": -123.716, "theta_base": -113.939, "v0": 1.206, "v1": -23.724, "v2": 36.022, "v3": -36.276, "v4": 22.125, "amplitude": 37.628, "phase_angle": 16.800, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.511, "filter_rmsd": 0.104, "frame": { "rmsd": 0.010, "origin": [ 296.305, 208.265, 280.739 ], "x_axis": [ -0.711, -0.164, -0.683 ], "y_axis": [ -0.254, -0.847, 0.467 ], "z_axis": [ -0.655, 0.506, 0.561 ], "quaternion": [ 0.025, -0.379, 0.275, 0.883 ] } }, { "index": 1067, "index_chain": 1067, "chain_name": "a", "nt_resnum": 1068, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1068", "linked_nts": [ "///a/1067", "///a/1069" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -72.729, "beta": 170.843, "gamma": 64.103, "delta": 77.906, "epsilon": -134.896, "zeta": -88.510, "epsilon_zeta": -46.386, "bb_type": "BI", "chi": -161.515, "glyco_bond": "anti", "C5prime_xyz": [ -1.754, 8.835, 0.548 ], "P_xyz": [ 0.715, 9.669, 0.465 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.868, "theta": -154.268, "eta_prime": -178.525, "theta_prime": -151.414, "eta_base": -137.487, "theta_base": -118.986, "v0": -1.896, "v1": -22.258, "v2": 36.587, "v3": -38.722, "v4": 25.619, "amplitude": 39.278, "phase_angle": 21.334, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.761, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 291.991, 209.945, 280.954 ], "x_axis": [ -0.336, -0.791, -0.512 ], "y_axis": [ 0.207, -0.592, 0.779 ], "z_axis": [ -0.919, 0.155, 0.363 ], "quaternion": [ -0.330, -0.473, 0.309, 0.757 ] } }, { "index": 1068, "index_chain": 1068, "chain_name": "a", "nt_resnum": 1069, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1069", "linked_nts": [ "///a/1068", "///a/1070" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -64.482, "beta": 153.496, "gamma": 63.543, "delta": 80.742, "epsilon": -146.858, "zeta": -76.324, "epsilon_zeta": -70.535, "bb_type": "BI", "chi": -152.246, "glyco_bond": "anti", "C5prime_xyz": [ -1.475, 8.736, 0.075 ], "P_xyz": [ 1.007, 8.997, -0.695 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.813, "theta": -145.451, "eta_prime": 177.757, "theta_prime": -149.154, "eta_base": -137.767, "theta_base": -135.444, "v0": 2.886, "v1": -25.137, "v2": 36.665, "v3": -35.919, "v4": 20.834, "amplitude": 37.835, "phase_angle": 14.284, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.577, "filter_rmsd": 0.110, "frame": { "rmsd": 0.015, "origin": [ 288.856, 209.973, 281.042 ], "x_axis": [ -0.122, -0.992, -0.032 ], "y_axis": [ 0.123, -0.047, 0.991 ], "z_axis": [ -0.985, 0.117, 0.128 ], "quaternion": [ -0.490, -0.446, 0.487, 0.569 ] } }, { "index": 1069, "index_chain": 1069, "chain_name": "a", "nt_resnum": 1070, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1070", "linked_nts": [ "///a/1069", "///a/1071" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -68.316, "beta": 170.928, "gamma": 64.424, "delta": 75.478, "epsilon": -135.467, "zeta": -60.873, "epsilon_zeta": -74.594, "bb_type": "BI", "chi": -152.161, "glyco_bond": "anti", "C5prime_xyz": [ -1.645, 8.843, 0.015 ], "P_xyz": [ 0.806, 9.526, -0.567 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.800, "theta": -128.629, "eta_prime": -179.088, "theta_prime": -129.291, "eta_base": -151.869, "theta_base": -99.473, "v0": 1.038, "v1": -25.448, "v2": 38.871, "v3": -39.243, "v4": 24.076, "amplitude": 40.671, "phase_angle": 17.113, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.742, "filter_rmsd": 0.068, "frame": { "rmsd": 0.017, "origin": [ 284.763, 209.723, 280.146 ], "x_axis": [ 0.042, -0.926, 0.375 ], "y_axis": [ 0.065, 0.377, 0.924 ], "z_axis": [ -0.997, -0.014, 0.076 ], "quaternion": [ 0.611, 0.384, -0.561, -0.405 ] } }, { "index": 1070, "index_chain": 1070, "chain_name": "a", "nt_resnum": 1071, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1071", "linked_nts": [ "///a/1070", "///a/1072" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -73.746, "beta": -172.297, "gamma": 51.389, "delta": 76.953, "epsilon": -138.211, "zeta": -63.877, "epsilon_zeta": -74.333, "bb_type": "BI", "chi": -150.122, "glyco_bond": "anti", "C5prime_xyz": [ -1.751, 8.889, -0.163 ], "P_xyz": [ 0.617, 9.982, -0.073 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.662, "theta": -111.557, "eta_prime": 176.730, "theta_prime": -152.059, "eta_base": -139.393, "theta_base": 163.534, "v0": -2.927, "v1": -21.385, "v2": 35.914, "v3": -38.652, "v4": 26.205, "amplitude": 38.950, "phase_angle": 22.772, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.733, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 281.875, 206.252, 281.370 ], "x_axis": [ 0.607, -0.349, 0.714 ], "y_axis": [ -0.122, 0.847, 0.517 ], "z_axis": [ -0.785, -0.401, 0.472 ], "quaternion": [ 0.855, 0.269, -0.438, -0.066 ] } }, { "index": 1071, "index_chain": 1071, "chain_name": "a", "nt_resnum": 1072, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1072", "linked_nts": [ "///a/1071", "///a/1073" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI", "alpha": 153.522, "beta": 152.807, "gamma": 64.577, "delta": 79.795, "epsilon": -152.692, "zeta": -72.310, "epsilon_zeta": -80.383, "bb_type": "BI", "chi": -159.764, "glyco_bond": "anti", "C5prime_xyz": [ -1.736, 8.873, 0.435 ], "P_xyz": [ 0.743, 9.551, 0.048 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 10.341, "theta": -110.653, "eta_prime": 43.126, "theta_prime": -116.873, "eta_base": 31.055, "theta_base": -70.283, "v0": -4.919, "v1": -18.117, "v2": 32.833, "v3": -36.652, "v4": 26.265, "amplitude": 36.592, "phase_angle": 26.198, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.587, "filter_rmsd": 0.104, "frame": { "rmsd": 0.013, "origin": [ 270.102, 207.831, 280.075 ], "x_axis": [ 0.058, 0.818, -0.573 ], "y_axis": [ 0.643, 0.408, 0.648 ], "z_axis": [ 0.764, -0.406, -0.502 ], "quaternion": [ 0.491, 0.537, 0.680, 0.089 ] } }, { "index": 1072, "index_chain": 1072, "chain_name": "a", "nt_resnum": 1073, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1073", "linked_nts": [ "///a/1072", "///a/1074" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": 169.005, "beta": -140.820, "gamma": 147.747, "delta": 80.199, "epsilon": -127.938, "zeta": -99.301, "epsilon_zeta": -28.637, "bb_type": "--", "chi": -165.436, "glyco_bond": "anti", "C5prime_xyz": [ -1.514, 8.802, 0.792 ], "P_xyz": [ 0.632, 9.453, -0.547 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.052, "theta": -159.540, "eta_prime": -176.241, "theta_prime": -160.070, "eta_base": -106.284, "theta_base": -141.608, "v0": -2.607, "v1": -20.692, "v2": 34.841, "v3": -37.223, "v4": 25.144, "amplitude": 37.695, "phase_angle": 22.439, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.013, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 274.036, 210.844, 277.287 ], "x_axis": [ 0.432, 0.826, 0.364 ], "y_axis": [ 0.426, -0.542, 0.724 ], "z_axis": [ 0.795, -0.158, -0.586 ], "quaternion": [ 0.276, 0.800, 0.391, 0.362 ] } }, { "index": 1073, "index_chain": 1073, "chain_name": "a", "nt_resnum": 1074, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1074", "linked_nts": [ "///a/1073", "///a/1075" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -60.532, "beta": 159.657, "gamma": 54.860, "delta": 82.161, "epsilon": -144.961, "zeta": 15.631, "epsilon_zeta": 199.407, "bb_type": "--", "chi": -136.991, "glyco_bond": "anti", "C5prime_xyz": [ -1.241, 8.589, -0.854 ], "P_xyz": [ 1.261, 8.546, -1.623 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.779, "theta": -69.403, "eta_prime": 175.804, "theta_prime": -80.514, "eta_base": -156.594, "theta_base": -50.478, "v0": 3.259, "v1": -24.877, "v2": 35.843, "v3": -34.888, "v4": 20.051, "amplitude": 36.886, "phase_angle": 13.657, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.400, "filter_rmsd": 0.045, "frame": { "rmsd": 0.021, "origin": [ 276.196, 210.785, 275.101 ], "x_axis": [ 0.553, 0.463, 0.693 ], "y_axis": [ 0.436, -0.869, 0.233 ], "z_axis": [ 0.710, 0.173, -0.683 ], "quaternion": [ 0.017, 0.881, 0.255, 0.398 ] } }, { "index": 1074, "index_chain": 1074, "chain_name": "a", "nt_resnum": 1075, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1075", "linked_nts": [ "///a/1074", "///a/1076" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BI,non-canonical,helix", "alpha": -153.391, "beta": 113.755, "gamma": 167.451, "delta": 80.579, "epsilon": -132.308, "zeta": -59.686, "epsilon_zeta": -72.622, "bb_type": "BI", "chi": 15.687, "glyco_bond": "syn", "C5prime_xyz": [ -5.332, 3.679, -0.922 ], "P_xyz": [ -7.495, 3.475, 0.491 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.998, "theta": -175.068, "eta_prime": -153.712, "theta_prime": -154.791, "eta_base": -82.814, "theta_base": -166.700, "v0": 3.528, "v1": -26.734, "v2": 38.516, "v3": -37.471, "v4": 21.438, "amplitude": 39.624, "phase_angle": 13.586, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.024, "frame": { "rmsd": 0.024, "origin": [ 284.409, 206.992, 280.201 ], "x_axis": [ 0.110, 0.777, 0.620 ], "y_axis": [ -0.489, 0.585, -0.647 ], "z_axis": [ -0.865, -0.232, 0.445 ], "quaternion": [ 0.732, -0.142, -0.507, 0.433 ] } }, { "index": 1075, "index_chain": 1075, "chain_name": "a", "nt_resnum": 1076, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1076", "linked_nts": [ "///a/1075", "///a/1077" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -65.373, "beta": 156.944, "gamma": 79.137, "delta": 80.312, "epsilon": -152.200, "zeta": -77.012, "epsilon_zeta": -75.188, "bb_type": "BI", "chi": -169.191, "glyco_bond": "anti", "C5prime_xyz": [ -1.339, 8.631, 1.079 ], "P_xyz": [ 1.184, 9.078, 0.610 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.951, "theta": -118.127, "eta_prime": -153.446, "theta_prime": -126.031, "eta_base": -152.280, "theta_base": -81.587, "v0": -0.219, "v1": -21.960, "v2": 34.686, "v3": -35.711, "v4": 22.787, "amplitude": 36.685, "phase_angle": 19.000, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.140, "filter_rmsd": 0.041, "frame": { "rmsd": 0.013, "origin": [ 288.217, 209.956, 280.841 ], "x_axis": [ 0.306, -0.952, -0.017 ], "y_axis": [ -0.405, -0.114, -0.907 ], "z_axis": [ 0.862, 0.284, -0.421 ], "quaternion": [ -0.439, 0.678, -0.500, 0.311 ] } }, { "index": 1076, "index_chain": 1076, "chain_name": "a", "nt_resnum": 1077, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1077", "linked_nts": [ "///a/1076", "///a/1078" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end,multiplet", "alpha": 171.160, "beta": -145.541, "gamma": 151.580, "delta": 81.362, "epsilon": -100.510, "zeta": -123.832, "epsilon_zeta": 23.322, "bb_type": "--", "chi": -150.751, "glyco_bond": "anti", "C5prime_xyz": [ -1.576, 8.740, -0.001 ], "P_xyz": [ 0.211, 9.251, -1.826 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.065, "theta": -112.600, "eta_prime": -172.747, "theta_prime": -118.402, "eta_base": -108.987, "theta_base": -78.487, "v0": 1.016, "v1": -23.047, "v2": 35.144, "v3": -35.547, "v4": 21.807, "amplitude": 36.771, "phase_angle": 17.108, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.072, "filter_rmsd": 0.104, "frame": { "rmsd": 0.013, "origin": [ 291.047, 208.080, 279.932 ], "x_axis": [ 0.104, -0.746, -0.658 ], "y_axis": [ -0.104, 0.650, -0.753 ], "z_axis": [ 0.989, 0.147, -0.009 ], "quaternion": [ 0.661, -0.340, 0.624, -0.243 ] } }, { "index": 1077, "index_chain": 1077, "chain_name": "a", "nt_resnum": 1078, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1078", "linked_nts": [ "///a/1077", "///a/1079" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": 135.215, "beta": -104.274, "gamma": 165.212, "delta": 79.703, "epsilon": -95.173, "zeta": -15.826, "epsilon_zeta": -79.347, "bb_type": "--", "chi": -157.587, "glyco_bond": "anti", "C5prime_xyz": [ -1.541, 8.872, 0.326 ], "P_xyz": [ -0.078, 8.920, -1.816 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.308, "theta": -37.476, "eta_prime": -177.601, "theta_prime": -72.554, "eta_base": -124.074, "theta_base": -85.908, "v0": -2.284, "v1": -21.629, "v2": 35.924, "v3": -38.217, "v4": 25.568, "amplitude": 38.717, "phase_angle": 21.898, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 293.317, 206.943, 275.039 ], "x_axis": [ -0.540, -0.016, -0.841 ], "y_axis": [ 0.175, 0.976, -0.131 ], "z_axis": [ 0.823, -0.218, -0.524 ], "quaternion": [ 0.477, 0.046, 0.872, -0.100 ] } }, { "index": 1078, "index_chain": 1078, "chain_name": "a", "nt_resnum": 1079, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1079", "linked_nts": [ "///a/1078", "///a/1080" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": 178.978, "beta": 179.544, "gamma": 65.626, "delta": 147.153, "epsilon": -87.784, "zeta": -111.121, "epsilon_zeta": 23.336, "bb_type": "--", "chi": -156.782, "glyco_bond": "anti", "C5prime_xyz": [ -2.171, 8.737, 0.617 ], "P_xyz": [ -0.315, 9.384, 2.323 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 74.477, "theta": -38.310, "eta_prime": 127.544, "theta_prime": -70.527, "eta_base": 151.950, "theta_base": -41.637, "v0": -26.708, "v1": 40.491, "v2": -37.970, "v3": 23.643, "v4": 1.639, "amplitude": 40.711, "phase_angle": 158.856, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.099, "frame": { "rmsd": 0.016, "origin": [ 293.025, 207.695, 271.320 ], "x_axis": [ 0.486, -0.693, 0.533 ], "y_axis": [ 0.781, 0.618, 0.091 ], "z_axis": [ -0.392, 0.372, 0.841 ], "quaternion": [ 0.858, -0.082, -0.269, -0.429 ] } }, { "index": 1079, "index_chain": 1079, "chain_name": "a", "nt_resnum": 1080, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1080", "linked_nts": [ "///a/1079", "///a/1081" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-stack,non-canonical,helix-end", "alpha": 164.038, "beta": -134.636, "gamma": 150.992, "delta": 83.816, "epsilon": -122.669, "zeta": -63.718, "epsilon_zeta": -58.951, "bb_type": "--", "chi": -175.791, "glyco_bond": "anti", "C5prime_xyz": [ -1.228, 8.465, 1.492 ], "P_xyz": [ 1.143, 8.885, 0.459 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 131.975, "theta": -118.317, "eta_prime": -173.354, "theta_prime": -122.707, "eta_base": -141.491, "theta_base": -96.130, "v0": 3.241, "v1": -24.181, "v2": 34.836, "v3": -33.919, "v4": 19.344, "amplitude": 35.833, "phase_angle": 13.551, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.115, "frame": { "rmsd": 0.015, "origin": [ 296.805, 221.362, 276.153 ], "x_axis": [ 0.896, -0.443, -0.000 ], "y_axis": [ -0.254, -0.513, -0.820 ], "z_axis": [ 0.363, 0.735, -0.572 ], "quaternion": [ -0.450, 0.863, -0.202, 0.105 ] } }, { "index": 1080, "index_chain": 1080, "chain_name": "a", "nt_resnum": 1081, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1081", "linked_nts": [ "///a/1080", "///a/1082" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -65.923, "beta": -171.293, "gamma": 46.870, "delta": 81.901, "epsilon": -146.729, "zeta": -69.598, "epsilon_zeta": -77.130, "bb_type": "BI", "chi": -173.703, "glyco_bond": "anti", "C5prime_xyz": [ -1.549, 8.619, 1.301 ], "P_xyz": [ 0.719, 9.053, 2.541 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.120, "theta": -142.501, "eta_prime": -174.634, "theta_prime": -139.884, "eta_base": -125.481, "theta_base": -112.485, "v0": 0.203, "v1": -22.093, "v2": 34.242, "v3": -35.085, "v4": 22.015, "amplitude": 36.061, "phase_angle": 18.276, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.575, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 301.692, 224.080, 272.467 ], "x_axis": [ 0.220, -0.945, -0.241 ], "y_axis": [ -0.959, -0.164, -0.231 ], "z_axis": [ 0.179, 0.282, -0.942 ], "quaternion": [ -0.168, 0.763, -0.624, -0.020 ] } }, { "index": 1081, "index_chain": 1081, "chain_name": "a", "nt_resnum": 1082, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1082", "linked_nts": [ "///a/1081", "///a/1083" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem", "alpha": -85.131, "beta": -177.185, "gamma": 56.812, "delta": 78.658, "epsilon": -146.637, "zeta": -66.283, "epsilon_zeta": -80.353, "bb_type": "BI", "chi": -164.904, "glyco_bond": "anti", "C5prime_xyz": [ -1.550, 8.748, 0.761 ], "P_xyz": [ 0.971, 9.377, 1.082 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.189, "theta": -141.270, "eta_prime": 168.752, "theta_prime": -139.860, "eta_base": -150.848, "theta_base": -104.708, "v0": 0.736, "v1": -24.308, "v2": 37.292, "v3": -37.855, "v4": 23.377, "amplitude": 39.102, "phase_angle": 17.500, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.641, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 304.021, 224.499, 269.937 ], "x_axis": [ -0.404, -0.899, -0.168 ], "y_axis": [ -0.896, 0.426, -0.124 ], "z_axis": [ 0.183, 0.101, -0.978 ], "quaternion": [ 0.105, -0.536, 0.838, -0.007 ] } }, { "index": 1082, "index_chain": 1082, "chain_name": "a", "nt_resnum": 1083, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1083", "linked_nts": [ "///a/1082", "///a/1084" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -77.516, "beta": 171.010, "gamma": 67.250, "delta": 76.923, "epsilon": -141.481, "zeta": -68.859, "epsilon_zeta": -72.621, "bb_type": "BI", "chi": -173.064, "glyco_bond": "anti", "C5prime_xyz": [ -1.500, 8.650, 1.236 ], "P_xyz": [ 1.032, 9.276, 1.300 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.403, "theta": -139.402, "eta_prime": -179.798, "theta_prime": -136.691, "eta_base": -127.241, "theta_base": -92.448, "v0": 1.386, "v1": -25.652, "v2": 38.814, "v3": -39.019, "v4": 23.696, "amplitude": 40.508, "phase_angle": 16.628, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.606, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 304.671, 222.434, 266.437 ], "x_axis": [ -0.902, -0.431, -0.014 ], "y_axis": [ -0.431, 0.902, -0.005 ], "z_axis": [ 0.015, 0.002, -1.000 ], "quaternion": [ 0.008, -0.221, 0.975, -0.001 ] } }, { "index": 1083, "index_chain": 1083, "chain_name": "a", "nt_resnum": 1084, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1084", "linked_nts": [ "///a/1083", "///a/1085" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -67.283, "beta": 167.930, "gamma": 63.540, "delta": 81.434, "epsilon": -153.605, "zeta": -80.931, "epsilon_zeta": -72.673, "bb_type": "BI", "chi": -162.592, "glyco_bond": "anti", "C5prime_xyz": [ -1.424, 8.715, 0.667 ], "P_xyz": [ 1.163, 9.101, 0.533 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.882, "theta": -154.224, "eta_prime": -172.151, "theta_prime": -155.493, "eta_base": -108.645, "theta_base": -146.888, "v0": 1.131, "v1": -23.748, "v2": 36.075, "v3": -36.300, "v4": 22.203, "amplitude": 37.693, "phase_angle": 16.849, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.782, "filter_rmsd": 0.108, "frame": { "rmsd": 0.010, "origin": [ 302.726, 220.769, 263.659 ], "x_axis": [ -0.945, 0.324, -0.041 ], "y_axis": [ 0.326, 0.934, -0.144 ], "z_axis": [ -0.008, -0.150, -0.989 ], "quaternion": [ 0.008, 0.165, 0.983, -0.075 ] } }, { "index": 1084, "index_chain": 1084, "chain_name": "a", "nt_resnum": 1085, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1085", "linked_nts": [ "///a/1084", "///a/1086" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -61.775, "beta": 164.274, "gamma": 63.302, "delta": 82.649, "epsilon": -115.475, "zeta": -99.690, "epsilon_zeta": -15.785, "bb_type": "--", "chi": -152.830, "glyco_bond": "anti", "C5prime_xyz": [ -1.673, 8.791, 0.103 ], "P_xyz": [ 0.852, 9.310, -0.255 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -176.367, "theta": -116.021, "eta_prime": -169.203, "theta_prime": -155.892, "eta_base": -153.190, "theta_base": 131.691, "v0": -1.200, "v1": -20.694, "v2": 33.475, "v3": -35.103, "v4": 22.922, "amplitude": 35.739, "phase_angle": 20.505, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.774, "filter_rmsd": 0.101, "frame": { "rmsd": 0.013, "origin": [ 302.533, 218.498, 261.193 ], "x_axis": [ -0.767, 0.620, -0.165 ], "y_axis": [ 0.637, 0.704, -0.314 ], "z_axis": [ -0.078, -0.346, -0.935 ], "quaternion": [ 0.024, 0.340, 0.923, -0.179 ] } }, { "index": 1085, "index_chain": 1085, "chain_name": "a", "nt_resnum": 1086, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1086", "linked_nts": [ "///a/1085", "///a/1087" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn", "alpha": 77.407, "beta": -168.124, "gamma": 129.397, "delta": 78.779, "epsilon": -114.030, "zeta": -68.279, "epsilon_zeta": -45.751, "bb_type": "--", "chi": -13.432, "glyco_bond": "syn", "C5prime_xyz": [ -5.277, 4.584, -1.978 ], "P_xyz": [ -6.088, 2.102, -2.031 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 28.402, "theta": -123.157, "eta_prime": 45.522, "theta_prime": -119.426, "eta_base": 28.944, "theta_base": -143.492, "v0": -5.918, "v1": -18.029, "v2": 33.564, "v3": -38.021, "v4": 27.713, "amplitude": 37.817, "phase_angle": 27.434, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.045, "frame": { "rmsd": 0.018, "origin": [ 313.583, 216.204, 257.333 ], "x_axis": [ 0.176, -0.876, 0.450 ], "y_axis": [ -0.840, -0.372, -0.395 ], "z_axis": [ 0.513, -0.309, -0.801 ], "quaternion": [ -0.028, 0.766, -0.560, 0.314 ] } }, { "index": 1086, "index_chain": 1086, "chain_name": "a", "nt_resnum": 1087, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1087", "linked_nts": [ "///a/1086", "///a/1088" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -67.397, "beta": 175.515, "gamma": 51.491, "delta": 87.380, "epsilon": -136.535, "zeta": -89.135, "epsilon_zeta": -47.401, "bb_type": "BI", "chi": -115.211, "glyco_bond": "anti", "C5prime_xyz": [ -1.779, 8.227, -1.929 ], "P_xyz": [ 0.698, 8.545, -2.703 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.711, "theta": -150.098, "eta_prime": -174.560, "theta_prime": -176.498, "eta_base": 173.917, "theta_base": 169.339, "v0": -0.373, "v1": -19.453, "v2": 30.613, "v3": -31.728, "v4": 20.323, "amplitude": 32.433, "phase_angle": 19.287, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.383, "filter_rmsd": 0.040, "frame": { "rmsd": 0.013, "origin": [ 312.012, 214.590, 259.991 ], "x_axis": [ 0.351, 0.936, 0.025 ], "y_axis": [ -0.930, 0.351, -0.109 ], "z_axis": [ -0.111, 0.015, 0.994 ], "quaternion": [ 0.821, -0.038, -0.041, 0.568 ] } }, { "index": 1087, "index_chain": 1087, "chain_name": "a", "nt_resnum": 1088, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1088", "linked_nts": [ "///a/1087", "///a/1089" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical", "alpha": -107.183, "beta": 157.497, "gamma": -71.728, "delta": 144.410, "epsilon": -154.064, "zeta": 116.877, "epsilon_zeta": 89.059, "bb_type": "--", "chi": -132.536, "glyco_bond": "anti", "C5prime_xyz": [ -2.333, 8.778, -0.575 ], "P_xyz": [ -2.456, 11.324, 0.102 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 9.961, "theta": 65.926, "eta_prime": 11.153, "theta_prime": 54.094, "eta_base": -3.853, "theta_base": 49.471, "v0": -27.369, "v1": 40.343, "v2": -37.034, "v3": 22.110, "v4": 3.031, "amplitude": 40.264, "phase_angle": 156.893, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 298.073, 209.652, 269.621 ], "x_axis": [ -0.974, -0.073, -0.215 ], "y_axis": [ 0.136, 0.568, -0.812 ], "z_axis": [ 0.181, -0.820, -0.543 ], "quaternion": [ 0.113, 0.018, 0.878, -0.465 ] } }, { "index": 1088, "index_chain": 1088, "chain_name": "a", "nt_resnum": 1089, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1089", "linked_nts": [ "///a/1088", "///a/1090" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": 160.897, "beta": -179.050, "gamma": 74.349, "delta": 79.331, "epsilon": -140.632, "zeta": -53.365, "epsilon_zeta": -87.267, "bb_type": "BI", "chi": -153.393, "glyco_bond": "anti", "C5prime_xyz": [ -1.758, 8.803, 0.064 ], "P_xyz": [ 0.687, 9.546, -0.335 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 93.045, "theta": -128.017, "eta_prime": 98.897, "theta_prime": -135.901, "eta_base": 102.262, "theta_base": -104.428, "v0": -2.359, "v1": -21.301, "v2": 35.478, "v3": -37.867, "v4": 25.347, "amplitude": 38.283, "phase_angle": 22.071, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.103, "frame": { "rmsd": 0.010, "origin": [ 306.726, 221.535, 263.199 ], "x_axis": [ -0.965, 0.115, 0.235 ], "y_axis": [ -0.087, -0.988, 0.126 ], "z_axis": [ 0.246, 0.101, 0.964 ], "quaternion": [ 0.051, 0.122, 0.057, 0.990 ] } }, { "index": 1089, "index_chain": 1089, "chain_name": "a", "nt_resnum": 1090, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1090", "linked_nts": [ "///a/1089", "///a/1091" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -126.146, "beta": 144.829, "gamma": 122.929, "delta": 77.679, "epsilon": -132.966, "zeta": -85.029, "epsilon_zeta": -47.937, "bb_type": "BI", "chi": -158.219, "glyco_bond": "anti", "C5prime_xyz": [ -1.462, 8.817, 0.420 ], "P_xyz": [ -0.098, 9.935, -1.508 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.162, "theta": -164.502, "eta_prime": 175.519, "theta_prime": -162.681, "eta_base": -134.034, "theta_base": -136.292, "v0": 0.905, "v1": -24.685, "v2": 37.849, "v3": -38.335, "v4": 23.516, "amplitude": 39.640, "phase_angle": 17.290, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.065, "frame": { "rmsd": 0.010, "origin": [ 305.227, 222.801, 265.811 ], "x_axis": [ -0.902, -0.410, 0.134 ], "y_axis": [ 0.431, -0.845, 0.317 ], "z_axis": [ -0.017, 0.343, 0.939 ], "quaternion": [ -0.219, 0.031, 0.172, 0.960 ] } }, { "index": 1090, "index_chain": 1090, "chain_name": "a", "nt_resnum": 1091, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1091", "linked_nts": [ "///a/1090", "///a/1092" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -60.321, "beta": 167.889, "gamma": 57.688, "delta": 78.384, "epsilon": -145.202, "zeta": -73.685, "epsilon_zeta": -71.518, "bb_type": "BI", "chi": -159.909, "glyco_bond": "anti", "C5prime_xyz": [ -1.443, 8.798, 0.511 ], "P_xyz": [ 1.112, 9.267, 0.378 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.277, "theta": -144.506, "eta_prime": -179.449, "theta_prime": -144.093, "eta_base": -143.356, "theta_base": -115.801, "v0": 1.193, "v1": -24.824, "v2": 37.754, "v3": -38.036, "v4": 23.227, "amplitude": 39.452, "phase_angle": 16.874, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.748, "filter_rmsd": 0.067, "frame": { "rmsd": 0.009, "origin": [ 303.262, 224.235, 269.781 ], "x_axis": [ -0.488, -0.872, -0.027 ], "y_axis": [ 0.853, -0.484, 0.197 ], "z_axis": [ -0.185, 0.073, 0.980 ], "quaternion": [ 0.502, 0.062, -0.079, -0.859 ] } }, { "index": 1091, "index_chain": 1091, "chain_name": "a", "nt_resnum": 1092, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1092", "linked_nts": [ "///a/1091", "///a/1093" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -63.104, "beta": 165.499, "gamma": 62.946, "delta": 76.210, "epsilon": -151.425, "zeta": -77.231, "epsilon_zeta": -74.194, "bb_type": "BI", "chi": -167.785, "glyco_bond": "anti", "C5prime_xyz": [ -1.344, 8.758, 0.978 ], "P_xyz": [ 1.220, 9.250, 0.860 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.303, "theta": -119.328, "eta_prime": -176.121, "theta_prime": -128.016, "eta_base": -130.143, "theta_base": -96.380, "v0": 0.961, "v1": -25.167, "v2": 38.677, "v3": -39.079, "v4": 23.965, "amplitude": 40.494, "phase_angle": 17.229, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.790, "filter_rmsd": 0.064, "frame": { "rmsd": 0.010, "origin": [ 300.840, 223.526, 273.266 ], "x_axis": [ 0.113, -0.993, -0.030 ], "y_axis": [ 0.980, 0.106, 0.168 ], "z_axis": [ -0.163, -0.049, 0.985 ], "quaternion": [ 0.742, 0.073, -0.045, -0.665 ] } }, { "index": 1092, "index_chain": 1092, "chain_name": "a", "nt_resnum": 1093, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1093", "linked_nts": [ "///a/1092", "///a/1094" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": 142.120, "beta": -149.512, "gamma": -170.903, "delta": 81.002, "epsilon": -113.086, "zeta": -72.292, "epsilon_zeta": -40.795, "bb_type": "--", "chi": -172.447, "glyco_bond": "anti", "C5prime_xyz": [ -1.268, 8.497, 1.266 ], "P_xyz": [ 0.009, 10.299, -0.123 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.996, "theta": -146.398, "eta_prime": -172.405, "theta_prime": -139.661, "eta_base": -117.105, "theta_base": -87.380, "v0": 5.693, "v1": -28.213, "v2": 38.754, "v3": -36.501, "v4": 19.426, "amplitude": 39.409, "phase_angle": 10.461, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.662, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 299.191, 220.500, 274.952 ], "x_axis": [ 0.588, -0.789, 0.178 ], "y_axis": [ 0.688, 0.603, 0.403 ], "z_axis": [ -0.426, -0.115, 0.898 ], "quaternion": [ 0.879, 0.147, -0.172, -0.420 ] } }, { "index": 1093, "index_chain": 1093, "chain_name": "a", "nt_resnum": 1094, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1094", "linked_nts": [ "///a/1093", "///a/1095" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -68.300, "beta": 159.012, "gamma": 66.112, "delta": 81.100, "epsilon": -174.106, "zeta": -90.595, "epsilon_zeta": -83.511, "bb_type": "BI", "chi": -158.677, "glyco_bond": "anti", "C5prime_xyz": [ -1.626, 8.790, 0.421 ], "P_xyz": [ 0.888, 9.320, -0.048 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.948, "theta": -142.044, "eta_prime": -175.158, "theta_prime": -158.673, "eta_base": -102.934, "theta_base": -154.184, "v0": -1.221, "v1": -21.478, "v2": 34.665, "v3": -36.262, "v4": 23.615, "amplitude": 36.978, "phase_angle": 20.373, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.303, "filter_rmsd": 0.103, "frame": { "rmsd": 0.006, "origin": [ 300.901, 217.592, 278.021 ], "x_axis": [ 0.973, 0.051, 0.225 ], "y_axis": [ -0.131, 0.925, 0.358 ], "z_axis": [ -0.190, -0.378, 0.906 ], "quaternion": [ 0.975, 0.189, -0.106, 0.047 ] } }, { "index": 1094, "index_chain": 1094, "chain_name": "a", "nt_resnum": 1095, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1095", "linked_nts": [ "///a/1094", "///a/1096" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": -167.793, "beta": -128.292, "gamma": -99.616, "delta": 150.430, "epsilon": -80.300, "zeta": 93.139, "epsilon_zeta": 186.561, "bb_type": "--", "chi": -115.897, "glyco_bond": "anti", "C5prime_xyz": [ -2.414, 8.424, -1.360 ], "P_xyz": [ -2.716, 10.052, -3.397 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -2.712, "theta": 103.838, "eta_prime": -19.159, "theta_prime": 119.189, "eta_base": -49.752, "theta_base": 144.573, "v0": -24.630, "v1": 39.669, "v2": -38.611, "v3": 25.407, "v4": -0.716, "amplitude": 40.554, "phase_angle": 162.190, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.012, "origin": [ 293.486, 212.444, 288.033 ], "x_axis": [ -0.358, 0.220, 0.907 ], "y_axis": [ -0.173, 0.939, -0.296 ], "z_axis": [ -0.917, -0.263, -0.299 ], "quaternion": [ 0.566, -0.015, -0.806, 0.174 ] } }, { "index": 1095, "index_chain": 1095, "chain_name": "a", "nt_resnum": 1096, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1096", "linked_nts": [ "///a/1095", "///a/1097" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": 84.637, "beta": -98.081, "gamma": -153.685, "delta": 82.752, "epsilon": -136.555, "zeta": -75.284, "epsilon_zeta": -61.271, "bb_type": "BI", "chi": -163.787, "glyco_bond": "anti", "C5prime_xyz": [ -1.369, 8.616, 0.718 ], "P_xyz": [ -1.138, 9.838, -1.583 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -116.943, "theta": -177.737, "eta_prime": -124.165, "theta_prime": -171.022, "eta_base": -98.928, "theta_base": -135.850, "v0": 1.980, "v1": -23.841, "v2": 35.394, "v3": -35.213, "v4": 20.992, "amplitude": 36.745, "phase_angle": 15.585, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "0i", "suiteness": 0.197, "filter_rmsd": 0.041, "frame": { "rmsd": 0.015, "origin": [ 296.038, 208.197, 281.780 ], "x_axis": [ -0.194, -0.324, -0.926 ], "y_axis": [ -0.054, 0.946, -0.320 ], "z_axis": [ 0.980, -0.012, -0.201 ], "quaternion": [ 0.623, -0.124, 0.765, -0.108 ] } }, { "index": 1096, "index_chain": 1096, "chain_name": "a", "nt_resnum": 1097, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1097", "linked_nts": [ "///a/1096", "///a/1098" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -79.443, "beta": 171.490, "gamma": 63.302, "delta": 81.404, "epsilon": -151.831, "zeta": -75.523, "epsilon_zeta": -76.309, "bb_type": "BI", "chi": -159.721, "glyco_bond": "anti", "C5prime_xyz": [ -1.345, 8.789, 0.496 ], "P_xyz": [ 1.228, 9.191, 0.347 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.738, "theta": -115.878, "eta_prime": 175.221, "theta_prime": -129.300, "eta_base": -137.267, "theta_base": -105.874, "v0": 0.418, "v1": -22.910, "v2": 35.426, "v3": -36.080, "v4": 22.482, "amplitude": 37.230, "phase_angle": 17.909, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.692, "filter_rmsd": 0.062, "frame": { "rmsd": 0.011, "origin": [ 298.784, 206.845, 279.712 ], "x_axis": [ -0.473, 0.354, -0.807 ], "y_axis": [ 0.226, 0.934, 0.277 ], "z_axis": [ 0.851, -0.051, -0.522 ], "quaternion": [ 0.484, 0.169, 0.856, 0.066 ] } }, { "index": 1097, "index_chain": 1097, "chain_name": "a", "nt_resnum": 1098, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1098", "linked_nts": [ "///a/1097", "///a/1099" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": 128.863, "beta": -154.712, "gamma": -162.642, "delta": 79.570, "epsilon": -141.396, "zeta": -76.594, "epsilon_zeta": -64.801, "bb_type": "BI", "chi": -171.801, "glyco_bond": "anti", "C5prime_xyz": [ -1.257, 8.563, 1.191 ], "P_xyz": [ -0.224, 10.595, -0.091 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.433, "theta": -177.420, "eta_prime": 178.289, "theta_prime": -169.970, "eta_base": -132.508, "theta_base": -135.455, "v0": 3.887, "v1": -26.768, "v2": 38.329, "v3": -37.089, "v4": 20.966, "amplitude": 39.349, "phase_angle": 13.077, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.276, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 299.202, 205.810, 276.299 ], "x_axis": [ -0.354, 0.753, -0.555 ], "y_axis": [ 0.592, 0.640, 0.490 ], "z_axis": [ 0.724, -0.156, -0.672 ], "quaternion": [ 0.392, 0.412, 0.816, 0.102 ] } }, { "index": 1098, "index_chain": 1098, "chain_name": "a", "nt_resnum": 1099, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1099", "linked_nts": [ "///a/1098", "///a/1100" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -59.839, "beta": 171.339, "gamma": 48.275, "delta": 79.133, "epsilon": -152.490, "zeta": -79.824, "epsilon_zeta": -72.666, "bb_type": "BI", "chi": -169.729, "glyco_bond": "anti", "C5prime_xyz": [ -1.375, 8.519, 1.056 ], "P_xyz": [ 1.202, 8.886, 1.337 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.971, "theta": -156.114, "eta_prime": 176.900, "theta_prime": -155.247, "eta_base": -136.846, "theta_base": -142.335, "v0": 5.210, "v1": -28.095, "v2": 39.103, "v3": -37.119, "v4": 20.095, "amplitude": 39.867, "phase_angle": 11.237, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.909, "filter_rmsd": 0.037, "frame": { "rmsd": 0.016, "origin": [ 300.149, 205.341, 272.855 ], "x_axis": [ -0.037, 0.996, -0.078 ], "y_axis": [ 0.723, 0.080, 0.686 ], "z_axis": [ 0.690, -0.031, -0.723 ], "quaternion": [ 0.283, 0.634, 0.678, 0.241 ] } }, { "index": 1099, "index_chain": 1099, "chain_name": "a", "nt_resnum": 1100, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1100", "linked_nts": [ "///a/1099", "///a/1101" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -60.607, "beta": 166.225, "gamma": 62.741, "delta": 78.352, "epsilon": -143.875, "zeta": -75.671, "epsilon_zeta": -68.204, "bb_type": "BI", "chi": -171.103, "glyco_bond": "anti", "C5prime_xyz": [ -1.378, 8.627, 1.143 ], "P_xyz": [ 1.193, 9.078, 1.133 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.798, "theta": -146.295, "eta_prime": -175.160, "theta_prime": -145.482, "eta_base": -150.988, "theta_base": -119.704, "v0": 2.558, "v1": -25.875, "v2": 38.128, "v3": -37.669, "v4": 22.172, "amplitude": 39.470, "phase_angle": 14.984, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.798, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 300.488, 204.832, 268.980 ], "x_axis": [ 0.254, 0.946, 0.201 ], "y_axis": [ 0.714, -0.324, 0.621 ], "z_axis": [ 0.653, -0.014, -0.757 ], "quaternion": [ 0.208, 0.764, 0.543, 0.280 ] } }, { "index": 1100, "index_chain": 1100, "chain_name": "a", "nt_resnum": 1101, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1101", "linked_nts": [ "///a/1100", "///a/1102" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end,multiplet", "alpha": -61.530, "beta": 172.833, "gamma": 53.290, "delta": 77.330, "epsilon": -132.334, "zeta": -57.341, "epsilon_zeta": -74.993, "bb_type": "BI", "chi": -164.388, "glyco_bond": "anti", "C5prime_xyz": [ -1.311, 8.745, 0.798 ], "P_xyz": [ 1.248, 9.149, 1.039 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.911, "theta": -122.854, "eta_prime": -178.337, "theta_prime": -120.903, "eta_base": -139.290, "theta_base": -89.115, "v0": 2.719, "v1": -26.930, "v2": 39.725, "v3": -39.074, "v4": 22.852, "amplitude": 41.086, "phase_angle": 14.789, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.931, "filter_rmsd": 0.071, "frame": { "rmsd": 0.014, "origin": [ 301.689, 206.380, 265.714 ], "x_axis": [ 0.547, 0.595, 0.589 ], "y_axis": [ 0.483, -0.799, 0.358 ], "z_axis": [ 0.683, 0.089, -0.725 ], "quaternion": [ 0.077, 0.876, 0.308, 0.363 ] } }, { "index": 1101, "index_chain": 1101, "chain_name": "a", "nt_resnum": 1102, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1102", "linked_nts": [ "///a/1101", "///a/1103" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -79.005, "beta": 164.909, "gamma": 82.123, "delta": 72.094, "epsilon": -138.217, "zeta": -64.810, "epsilon_zeta": -73.406, "bb_type": "BI", "chi": -171.717, "glyco_bond": "anti", "C5prime_xyz": [ -2.030, 8.829, 1.094 ], "P_xyz": [ 0.243, 10.048, 0.747 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.920, "theta": -139.633, "eta_prime": -169.876, "theta_prime": -136.622, "eta_base": -116.586, "theta_base": -86.864, "v0": -4.858, "v1": -21.943, "v2": 38.837, "v3": -42.726, "v4": 29.997, "amplitude": 42.838, "phase_angle": 24.961, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.047, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 305.479, 209.421, 265.187 ], "x_axis": [ 0.609, -0.060, 0.791 ], "y_axis": [ 0.071, -0.989, -0.130 ], "z_axis": [ 0.790, 0.136, -0.598 ], "quaternion": [ -0.074, 0.894, 0.003, 0.442 ] } }, { "index": 1102, "index_chain": 1102, "chain_name": "a", "nt_resnum": 1103, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1103", "linked_nts": [ "///a/1102", "///a/1104" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -70.953, "beta": -175.538, "gamma": 50.459, "delta": 80.805, "epsilon": -139.003, "zeta": -58.977, "epsilon_zeta": -80.027, "bb_type": "BI", "chi": -165.791, "glyco_bond": "anti", "C5prime_xyz": [ -1.171, 8.654, 0.904 ], "P_xyz": [ 1.325, 8.889, 1.596 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.821, "theta": -125.784, "eta_prime": -178.604, "theta_prime": -120.613, "eta_base": -113.564, "theta_base": -78.578, "v0": 4.616, "v1": -27.029, "v2": 38.001, "v3": -36.241, "v4": 19.995, "amplitude": 38.832, "phase_angle": 11.874, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.704, "filter_rmsd": 0.073, "frame": { "rmsd": 0.016, "origin": [ 310.746, 208.906, 265.771 ], "x_axis": [ 0.071, -0.880, 0.470 ], "y_axis": [ -0.509, -0.437, -0.741 ], "z_axis": [ 0.858, -0.186, -0.480 ], "quaternion": [ -0.197, 0.705, -0.493, 0.471 ] } }, { "index": 1103, "index_chain": 1103, "chain_name": "a", "nt_resnum": 1104, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1104", "linked_nts": [ "///a/1103", "///a/1105" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -74.468, "beta": -179.751, "gamma": 58.841, "delta": 80.672, "epsilon": -126.237, "zeta": -81.238, "epsilon_zeta": -44.999, "bb_type": "--", "chi": -165.565, "glyco_bond": "anti", "C5prime_xyz": [ -1.257, 8.579, 0.853 ], "P_xyz": [ 1.323, 8.872, 1.101 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.391, "theta": -134.968, "eta_prime": -171.352, "theta_prime": -129.558, "eta_base": -112.810, "theta_base": -80.997, "v0": 4.071, "v1": -26.563, "v2": 37.800, "v3": -36.439, "v4": 20.455, "amplitude": 38.751, "phase_angle": 12.720, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.804, "filter_rmsd": 0.039, "frame": { "rmsd": 0.013, "origin": [ 314.060, 204.971, 265.116 ], "x_axis": [ -0.530, -0.825, -0.199 ], "y_axis": [ -0.379, 0.440, -0.814 ], "z_axis": [ 0.759, -0.356, -0.545 ], "quaternion": [ 0.302, -0.380, 0.793, -0.369 ] } }, { "index": 1104, "index_chain": 1104, "chain_name": "a", "nt_resnum": 1105, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1105", "linked_nts": [ "///a/1104", "///a/1106" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -60.037, "beta": 152.602, "gamma": 62.685, "delta": 82.488, "epsilon": -139.290, "zeta": -67.118, "epsilon_zeta": -72.173, "bb_type": "BI", "chi": -156.771, "glyco_bond": "anti", "C5prime_xyz": [ -1.259, 8.613, 0.312 ], "P_xyz": [ 1.241, 8.666, -0.477 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.184, "theta": -127.731, "eta_prime": -174.676, "theta_prime": -129.413, "eta_base": -108.470, "theta_base": -101.609, "v0": 5.762, "v1": -27.210, "v2": 37.183, "v3": -34.796, "v4": 18.343, "amplitude": 37.755, "phase_angle": 9.995, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.557, "filter_rmsd": 0.038, "frame": { "rmsd": 0.014, "origin": [ 314.520, 201.932, 262.808 ], "x_axis": [ -0.650, -0.261, -0.713 ], "y_axis": [ 0.306, 0.769, -0.561 ], "z_axis": [ 0.695, -0.583, -0.420 ], "quaternion": [ 0.418, 0.014, 0.843, -0.339 ] } }, { "index": 1105, "index_chain": 1105, "chain_name": "a", "nt_resnum": 1106, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1106", "linked_nts": [ "///a/1105", "///a/1107" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -67.318, "beta": 178.343, "gamma": 59.904, "delta": 79.721, "epsilon": -115.124, "zeta": -60.480, "epsilon_zeta": -54.644, "bb_type": "--", "chi": -161.079, "glyco_bond": "anti", "C5prime_xyz": [ -1.318, 8.790, 0.589 ], "P_xyz": [ 1.263, 9.232, 0.735 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.273, "theta": -106.377, "eta_prime": -166.934, "theta_prime": -101.042, "eta_base": -123.986, "theta_base": -69.196, "v0": 1.072, "v1": -23.944, "v2": 36.470, "v3": -36.808, "v4": 22.555, "amplitude": 38.139, "phase_angle": 17.014, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.892, "filter_rmsd": 0.064, "frame": { "rmsd": 0.008, "origin": [ 315.217, 198.618, 258.747 ], "x_axis": [ -0.459, 0.535, -0.709 ], "y_axis": [ 0.672, 0.731, 0.116 ], "z_axis": [ 0.581, -0.423, -0.695 ], "quaternion": [ 0.380, 0.355, 0.849, -0.090 ] } }, { "index": 1106, "index_chain": 1106, "chain_name": "a", "nt_resnum": 1107, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1107", "linked_nts": [ "///a/1106", "///a/1108" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -68.819, "beta": -170.787, "gamma": 57.983, "delta": 77.891, "epsilon": -146.460, "zeta": -70.619, "epsilon_zeta": -75.841, "bb_type": "BI", "chi": -164.481, "glyco_bond": "anti", "C5prime_xyz": [ -1.417, 8.815, 0.761 ], "P_xyz": [ 1.073, 9.348, 1.361 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.242, "theta": -144.930, "eta_prime": -168.246, "theta_prime": -139.960, "eta_base": -118.460, "theta_base": -108.265, "v0": -0.227, "v1": -23.713, "v2": 37.316, "v3": -38.426, "v4": 24.334, "amplitude": 39.438, "phase_angle": 18.879, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.395, "filter_rmsd": 0.068, "frame": { "rmsd": 0.011, "origin": [ 317.758, 202.241, 251.367 ], "x_axis": [ -0.006, 0.960, 0.280 ], "y_axis": [ 0.560, -0.229, 0.796 ], "z_axis": [ 0.828, 0.161, -0.537 ], "quaternion": [ 0.239, 0.663, 0.573, 0.418 ] } }, { "index": 1107, "index_chain": 1107, "chain_name": "a", "nt_resnum": 1108, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1108", "linked_nts": [ "///a/1107", "///a/1109" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -69.408, "beta": 172.134, "gamma": 67.434, "delta": 78.725, "epsilon": -135.019, "zeta": -73.929, "epsilon_zeta": -61.091, "bb_type": "BI", "chi": -161.434, "glyco_bond": "anti", "C5prime_xyz": [ -1.383, 8.805, 0.608 ], "P_xyz": [ 1.182, 9.275, 0.392 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.317, "theta": -136.761, "eta_prime": -170.241, "theta_prime": -136.135, "eta_base": -127.699, "theta_base": -107.319, "v0": 0.941, "v1": -24.533, "v2": 37.537, "v3": -37.902, "v4": 23.294, "amplitude": 39.290, "phase_angle": 17.182, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.649, "filter_rmsd": 0.065, "frame": { "rmsd": 0.010, "origin": [ 320.567, 204.810, 248.816 ], "x_axis": [ 0.318, 0.629, 0.709 ], "y_axis": [ 0.454, -0.758, 0.469 ], "z_axis": [ 0.832, 0.173, -0.526 ], "quaternion": [ 0.092, 0.807, 0.336, 0.478 ] } }, { "index": 1108, "index_chain": 1108, "chain_name": "a", "nt_resnum": 1109, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1109", "linked_nts": [ "///a/1108", "///a/1110" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -60.519, "beta": 162.959, "gamma": 59.339, "delta": 77.903, "epsilon": -148.660, "zeta": -74.190, "epsilon_zeta": -74.471, "bb_type": "BI", "chi": -154.415, "glyco_bond": "anti", "C5prime_xyz": [ -1.855, 8.871, 0.130 ], "P_xyz": [ 0.595, 9.681, -0.226 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.654, "theta": -148.463, "eta_prime": -176.350, "theta_prime": -149.880, "eta_base": -131.194, "theta_base": -123.456, "v0": -4.740, "v1": -19.341, "v2": 34.647, "v3": -38.342, "v4": 27.180, "amplitude": 38.395, "phase_angle": 25.526, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.823, "filter_rmsd": 0.099, "frame": { "rmsd": 0.010, "origin": [ 322.967, 207.241, 248.276 ], "x_axis": [ 0.366, 0.083, 0.927 ], "y_axis": [ 0.397, -0.915, -0.075 ], "z_axis": [ 0.842, 0.395, -0.367 ], "quaternion": [ -0.145, 0.814, 0.147, 0.544 ] } }, { "index": 1109, "index_chain": 1109, "chain_name": "a", "nt_resnum": 1110, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1110", "linked_nts": [ "///a/1109", "///a/1111" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -65.287, "beta": 170.012, "gamma": 52.298, "delta": 76.287, "epsilon": -142.138, "zeta": -75.291, "epsilon_zeta": -66.847, "bb_type": "BI", "chi": -157.332, "glyco_bond": "anti", "C5prime_xyz": [ -1.678, 8.839, 0.331 ], "P_xyz": [ 0.817, 9.601, 0.397 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.982, "theta": -146.654, "eta_prime": 174.381, "theta_prime": -146.008, "eta_base": -145.843, "theta_base": -135.383, "v0": -1.852, "v1": -22.433, "v2": 36.883, "v3": -38.914, "v4": 25.696, "amplitude": 39.560, "phase_angle": 21.200, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.909, "filter_rmsd": 0.101, "frame": { "rmsd": 0.009, "origin": [ 325.759, 209.549, 248.368 ], "x_axis": [ 0.259, -0.517, 0.816 ], "y_axis": [ 0.225, -0.789, -0.572 ], "z_axis": [ 0.939, 0.332, -0.088 ], "quaternion": [ -0.309, 0.731, -0.100, 0.600 ] } }, { "index": 1110, "index_chain": 1110, "chain_name": "a", "nt_resnum": 1111, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1111", "linked_nts": [ "///a/1110", "///a/1112" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -61.085, "beta": 174.502, "gamma": 47.042, "delta": 76.562, "epsilon": -148.123, "zeta": -71.422, "epsilon_zeta": -76.701, "bb_type": "BI", "chi": -136.096, "glyco_bond": "anti", "C5prime_xyz": [ -2.063, 8.778, -0.947 ], "P_xyz": [ 0.258, 9.807, -1.538 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.023, "theta": -150.288, "eta_prime": 173.014, "theta_prime": -142.486, "eta_base": -166.544, "theta_base": -121.760, "v0": -4.815, "v1": -19.926, "v2": 35.562, "v3": -39.358, "v4": 27.818, "amplitude": 39.380, "phase_angle": 25.441, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.836, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 327.675, 211.374, 249.578 ], "x_axis": [ 0.148, -0.828, 0.541 ], "y_axis": [ 0.453, -0.429, -0.781 ], "z_axis": [ 0.879, 0.361, 0.312 ], "quaternion": [ 0.508, -0.562, 0.167, -0.631 ] } }, { "index": 1111, "index_chain": 1111, "chain_name": "a", "nt_resnum": 1112, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1112", "linked_nts": [ "///a/1111", "///a/1113" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -78.619, "beta": -151.791, "gamma": 50.721, "delta": 82.807, "epsilon": -153.876, "zeta": -71.802, "epsilon_zeta": -82.075, "bb_type": "BI", "chi": -147.945, "glyco_bond": "anti", "C5prime_xyz": [ -1.680, 8.793, -0.207 ], "P_xyz": [ 0.646, 9.687, 0.555 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.175, "theta": -149.686, "eta_prime": -179.389, "theta_prime": -145.185, "eta_base": -158.841, "theta_base": -109.355, "v0": -1.653, "v1": -20.391, "v2": 33.241, "v3": -35.081, "v4": 23.221, "amplitude": 35.640, "phase_angle": 21.142, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1m", "suiteness": 0.716, "filter_rmsd": 0.100, "frame": { "rmsd": 0.009, "origin": [ 334.386, 210.417, 252.480 ], "x_axis": [ -0.508, -0.858, -0.077 ], "y_axis": [ -0.022, 0.102, -0.995 ], "z_axis": [ 0.861, -0.503, -0.071 ], "quaternion": [ 0.362, -0.340, 0.648, -0.578 ] } }, { "index": 1112, "index_chain": 1112, "chain_name": "a", "nt_resnum": 1113, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1113", "linked_nts": [ "///a/1112", "///a/1114" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -72.214, "beta": 165.165, "gamma": 66.573, "delta": 79.976, "epsilon": -152.123, "zeta": -74.893, "epsilon_zeta": -77.230, "bb_type": "BI", "chi": -160.713, "glyco_bond": "anti", "C5prime_xyz": [ -1.378, 8.805, 0.548 ], "P_xyz": [ 1.182, 9.239, 0.144 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.445, "theta": -149.143, "eta_prime": -176.618, "theta_prime": -150.953, "eta_base": -128.459, "theta_base": -132.824, "v0": 1.570, "v1": -24.379, "v2": 36.690, "v3": -36.611, "v4": 22.140, "amplitude": 38.207, "phase_angle": 16.198, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.675, "filter_rmsd": 0.064, "frame": { "rmsd": 0.006, "origin": [ 337.088, 206.855, 252.234 ], "x_axis": [ -0.524, -0.558, -0.644 ], "y_axis": [ 0.277, 0.604, -0.748 ], "z_axis": [ 0.806, -0.570, -0.162 ], "quaternion": [ 0.479, -0.093, 0.757, -0.435 ] } }, { "index": 1113, "index_chain": 1113, "chain_name": "a", "nt_resnum": 1114, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1114", "linked_nts": [ "///a/1113", "///a/1115" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -64.506, "beta": 171.756, "gamma": 59.603, "delta": 77.138, "epsilon": -135.933, "zeta": -86.055, "epsilon_zeta": -49.878, "bb_type": "BI", "chi": -160.657, "glyco_bond": "anti", "C5prime_xyz": [ -1.472, 8.829, 0.536 ], "P_xyz": [ 1.087, 9.373, 0.481 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.273, "theta": -150.827, "eta_prime": -176.654, "theta_prime": -148.064, "eta_base": -145.745, "theta_base": -120.479, "v0": 0.436, "v1": -24.475, "v2": 37.948, "v3": -38.694, "v4": 24.053, "amplitude": 39.889, "phase_angle": 17.951, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.899, "filter_rmsd": 0.064, "frame": { "rmsd": 0.006, "origin": [ 339.225, 203.494, 252.508 ], "x_axis": [ -0.392, -0.172, -0.904 ], "y_axis": [ 0.526, 0.764, -0.373 ], "z_axis": [ 0.755, -0.621, -0.209 ], "quaternion": [ 0.539, 0.115, 0.769, -0.323 ] } }, { "index": 1114, "index_chain": 1114, "chain_name": "a", "nt_resnum": 1115, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1115", "linked_nts": [ "///a/1114", "///a/1116" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -62.170, "beta": 155.616, "gamma": 65.252, "delta": 82.773, "epsilon": -136.407, "zeta": -75.047, "epsilon_zeta": -61.360, "bb_type": "BI", "chi": -156.842, "glyco_bond": "anti", "C5prime_xyz": [ -1.466, 8.776, 0.319 ], "P_xyz": [ 1.082, 9.095, -0.171 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.551, "theta": -134.556, "eta_prime": -176.640, "theta_prime": -136.556, "eta_base": -138.650, "theta_base": -106.222, "v0": -0.405, "v1": -21.271, "v2": 33.571, "v3": -34.725, "v4": 22.178, "amplitude": 35.554, "phase_angle": 19.228, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.589, "filter_rmsd": 0.101, "frame": { "rmsd": 0.007, "origin": [ 340.465, 200.941, 251.336 ], "x_axis": [ -0.188, 0.352, -0.917 ], "y_axis": [ 0.798, 0.599, 0.066 ], "z_axis": [ 0.572, -0.720, -0.394 ], "quaternion": [ 0.504, 0.390, 0.738, -0.221 ] } }, { "index": 1115, "index_chain": 1115, "chain_name": "a", "nt_resnum": 1116, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1116", "linked_nts": [ "///a/1115", "///a/1117" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-stack,canonical,helix-end,stem-end", "alpha": -67.284, "beta": -178.358, "gamma": 41.903, "delta": 81.232, "epsilon": -144.059, "zeta": -68.394, "epsilon_zeta": -75.664, "bb_type": "BI", "chi": -169.495, "glyco_bond": "anti", "C5prime_xyz": [ -1.294, 8.603, 1.118 ], "P_xyz": [ 1.108, 8.890, 2.129 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.276, "theta": -139.307, "eta_prime": 171.835, "theta_prime": -134.992, "eta_base": -142.165, "theta_base": -103.333, "v0": 3.073, "v1": -25.010, "v2": 36.262, "v3": -35.361, "v4": 20.364, "amplitude": 37.357, "phase_angle": 13.911, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.717, "filter_rmsd": 0.109, "frame": { "rmsd": 0.010, "origin": [ 342.720, 198.577, 247.545 ], "x_axis": [ -0.070, 0.967, -0.246 ], "y_axis": [ 0.595, 0.238, 0.768 ], "z_axis": [ 0.801, -0.093, -0.592 ], "quaternion": [ 0.380, 0.567, 0.689, 0.245 ] } }, { "index": 1116, "index_chain": 1116, "chain_name": "a", "nt_resnum": 1117, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1117", "linked_nts": [ "///a/1116", "///a/1118" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical", "alpha": -69.547, "beta": 168.949, "gamma": 63.952, "delta": 80.459, "epsilon": -124.795, "zeta": -98.236, "epsilon_zeta": -26.559, "bb_type": "--", "chi": -171.033, "glyco_bond": "anti", "C5prime_xyz": [ -1.711, 8.666, 1.137 ], "P_xyz": [ 0.822, 9.269, 1.417 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.025, "theta": -153.985, "eta_prime": -171.621, "theta_prime": -141.699, "eta_base": -127.508, "theta_base": -149.770, "v0": -2.029, "v1": -20.673, "v2": 34.243, "v3": -36.368, "v4": 24.215, "amplitude": 36.855, "phase_angle": 21.699, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.790, "filter_rmsd": 0.040, "frame": { "rmsd": 0.010, "origin": [ 344.464, 199.370, 244.172 ], "x_axis": [ 0.199, 0.930, 0.308 ], "y_axis": [ 0.521, -0.367, 0.771 ], "z_axis": [ 0.830, 0.007, -0.558 ], "quaternion": [ 0.262, 0.729, 0.498, 0.391 ] } }, { "index": 1117, "index_chain": 1117, "chain_name": "a", "nt_resnum": 1118, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1118", "linked_nts": [ "///a/1117", "///a/1119" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,multiplet", "alpha": -74.090, "beta": 165.289, "gamma": 81.458, "delta": 145.778, "epsilon": -103.220, "zeta": 117.594, "epsilon_zeta": 139.186, "bb_type": "--", "chi": -104.285, "glyco_bond": "anti", "C5prime_xyz": [ -2.541, 8.174, -1.958 ], "P_xyz": [ -0.102, 8.661, -2.774 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -159.310, "theta": 129.285, "eta_prime": -141.108, "theta_prime": 130.677, "eta_base": -155.285, "theta_base": 132.761, "v0": -24.394, "v1": 37.418, "v2": -35.486, "v3": 22.370, "v4": 1.072, "amplitude": 37.848, "phase_angle": 159.647, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.114, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 345.677, 199.004, 241.299 ], "x_axis": [ 0.191, 0.769, 0.609 ], "y_axis": [ 0.820, -0.467, 0.332 ], "z_axis": [ 0.540, 0.436, -0.720 ], "quaternion": [ -0.034, 0.771, 0.515, 0.373 ] } }, { "index": 1118, "index_chain": 1118, "chain_name": "a", "nt_resnum": 1119, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1119", "linked_nts": [ "///a/1118", "///a/1120" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": 174.908, "beta": -137.847, "gamma": 98.323, "delta": 148.746, "epsilon": -155.917, "zeta": -116.669, "epsilon_zeta": -39.247, "bb_type": "BI", "chi": -125.555, "glyco_bond": "anti", "C5prime_xyz": [ -2.036, 8.602, -0.875 ], "P_xyz": [ 0.467, 8.828, -0.150 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.328, "theta": -89.529, "eta_prime": 163.510, "theta_prime": -160.515, "eta_base": 163.352, "theta_base": 136.456, "v0": -22.560, "v1": 37.439, "v2": -37.200, "v3": 25.029, "v4": -1.780, "amplitude": 38.731, "phase_angle": 163.833, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.100, "frame": { "rmsd": 0.008, "origin": [ 343.323, 193.144, 237.500 ], "x_axis": [ 0.162, 0.876, 0.454 ], "y_axis": [ 0.938, -0.279, 0.204 ], "z_axis": [ 0.305, 0.393, -0.868 ], "quaternion": [ -0.062, 0.760, 0.597, 0.250 ] } }, { "index": 1119, "index_chain": 1119, "chain_name": "a", "nt_resnum": 1120, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1120", "linked_nts": [ "///a/1119", "///a/1121" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": 139.586, "beta": -168.228, "gamma": 87.091, "delta": 147.759, "epsilon": -128.907, "zeta": -82.516, "epsilon_zeta": -46.391, "bb_type": "--", "chi": -98.676, "glyco_bond": "anti", "C5prime_xyz": [ -2.219, 7.918, -2.198 ], "P_xyz": [ 0.352, 8.235, -2.657 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 53.423, "theta": -80.270, "eta_prime": 90.565, "theta_prime": -102.087, "eta_base": 52.652, "theta_base": -65.453, "v0": -19.756, "v1": 34.077, "v2": -34.612, "v3": 24.109, "v4": -2.927, "amplitude": 35.691, "phase_angle": 165.880, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.101, "frame": { "rmsd": 0.009, "origin": [ 341.433, 184.324, 235.755 ], "x_axis": [ 0.260, -0.280, 0.924 ], "y_axis": [ 0.822, 0.566, -0.060 ], "z_axis": [ -0.506, 0.776, 0.378 ], "quaternion": [ 0.742, -0.282, -0.482, -0.371 ] } }, { "index": 1120, "index_chain": 1120, "chain_name": "a", "nt_resnum": 1121, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1121", "linked_nts": [ "///a/1120", "///a/1122" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -80.792, "beta": -174.249, "gamma": 58.286, "delta": 80.810, "epsilon": -134.680, "zeta": -63.448, "epsilon_zeta": -71.232, "bb_type": "BI", "chi": -177.498, "glyco_bond": "anti", "C5prime_xyz": [ -1.218, 8.363, 1.529 ], "P_xyz": [ 1.310, 8.496, 2.219 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.372, "theta": -126.682, "eta_prime": -162.729, "theta_prime": -123.156, "eta_base": -127.211, "theta_base": -86.246, "v0": 6.032, "v1": -28.053, "v2": 38.208, "v3": -35.743, "v4": 18.722, "amplitude": 38.778, "phase_angle": 9.832, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.475, "filter_rmsd": 0.040, "frame": { "rmsd": 0.011, "origin": [ 349.660, 196.136, 237.594 ], "x_axis": [ 0.756, -0.640, -0.137 ], "y_axis": [ -0.585, -0.567, -0.580 ], "z_axis": [ 0.293, 0.519, -0.803 ], "quaternion": [ -0.311, 0.884, -0.346, 0.044 ] } }, { "index": 1121, "index_chain": 1121, "chain_name": "a", "nt_resnum": 1122, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1122", "linked_nts": [ "///a/1121", "///a/1123" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end,stem-end,multiplet", "alpha": -69.261, "beta": 176.988, "gamma": 59.066, "delta": 78.418, "epsilon": -114.370, "zeta": -94.698, "epsilon_zeta": -19.671, "bb_type": "--", "chi": -159.700, "glyco_bond": "anti", "C5prime_xyz": [ -1.532, 8.866, 0.474 ], "P_xyz": [ 0.985, 9.552, 0.601 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.141, "theta": -151.221, "eta_prime": -169.658, "theta_prime": -140.473, "eta_base": -118.143, "theta_base": -130.074, "v0": -1.852, "v1": -21.567, "v2": 35.514, "v3": -37.567, "v4": 24.849, "amplitude": 38.128, "phase_angle": 21.340, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.837, "filter_rmsd": 0.061, "frame": { "rmsd": 0.007, "origin": [ 353.260, 196.541, 235.711 ], "x_axis": [ 0.127, -0.880, -0.459 ], "y_axis": [ -0.890, 0.104, -0.444 ], "z_axis": [ 0.439, 0.464, -0.770 ], "quaternion": [ -0.339, 0.669, -0.661, -0.007 ] } }, { "index": 1122, "index_chain": 1122, "chain_name": "a", "nt_resnum": 1123, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1123", "linked_nts": [ "///a/1122", "///a/1124" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -86.425, "beta": 133.979, "gamma": 110.856, "delta": 144.634, "epsilon": -133.141, "zeta": 141.213, "epsilon_zeta": 85.645, "bb_type": "--", "chi": -127.627, "glyco_bond": "anti", "C5prime_xyz": [ -1.968, 8.695, -0.864 ], "P_xyz": [ 0.194, 8.842, -2.336 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -163.058, "theta": 132.769, "eta_prime": -141.461, "theta_prime": 124.788, "eta_base": -136.113, "theta_base": 130.697, "v0": -23.731, "v1": 36.528, "v2": -34.709, "v3": 21.934, "v4": 0.921, "amplitude": 36.977, "phase_angle": 159.827, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.063, "frame": { "rmsd": 0.007, "origin": [ 355.089, 197.658, 233.518 ], "x_axis": [ -0.320, -0.884, -0.341 ], "y_axis": [ -0.668, 0.466, -0.580 ], "z_axis": [ 0.671, 0.042, -0.740 ], "quaternion": [ 0.318, -0.488, 0.795, -0.169 ] } }, { "index": 1123, "index_chain": 1123, "chain_name": "a", "nt_resnum": 1124, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1124", "linked_nts": [ "///a/1123", "///a/1125" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": 156.462, "beta": -125.534, "gamma": 102.875, "delta": 79.881, "epsilon": -139.053, "zeta": -65.754, "epsilon_zeta": -73.298, "bb_type": "BI", "chi": -165.080, "glyco_bond": "anti", "C5prime_xyz": [ -1.417, 8.600, 0.788 ], "P_xyz": [ 1.158, 8.284, 0.522 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 146.636, "theta": -120.737, "eta_prime": 131.502, "theta_prime": -125.711, "eta_base": 136.568, "theta_base": -98.272, "v0": 3.354, "v1": -26.653, "v2": 38.622, "v3": -37.694, "v4": 21.645, "amplitude": 39.780, "phase_angle": 13.862, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.035, "frame": { "rmsd": 0.012, "origin": [ 356.613, 203.202, 236.582 ], "x_axis": [ -0.140, -0.846, -0.514 ], "y_axis": [ -0.479, 0.512, -0.713 ], "z_axis": [ 0.867, 0.147, -0.477 ], "quaternion": [ 0.473, -0.454, 0.730, -0.194 ] } }, { "index": 1124, "index_chain": 1124, "chain_name": "a", "nt_resnum": 1125, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1125", "linked_nts": [ "///a/1124", "///a/1126" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -71.315, "beta": -176.415, "gamma": 49.496, "delta": 77.624, "epsilon": -142.570, "zeta": -65.217, "epsilon_zeta": -77.352, "bb_type": "BI", "chi": -165.996, "glyco_bond": "anti", "C5prime_xyz": [ -1.424, 8.690, 0.822 ], "P_xyz": [ 1.078, 9.276, 1.297 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.731, "theta": -138.510, "eta_prime": 175.421, "theta_prime": -134.181, "eta_base": -132.772, "theta_base": -99.400, "v0": 2.948, "v1": -26.453, "v2": 38.644, "v3": -37.978, "v4": 22.098, "amplitude": 39.909, "phase_angle": 14.462, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.875, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 359.500, 200.924, 234.025 ], "x_axis": [ -0.726, -0.273, -0.631 ], "y_axis": [ -0.213, 0.962, -0.171 ], "z_axis": [ 0.653, 0.010, -0.757 ], "quaternion": [ 0.346, -0.131, 0.928, -0.043 ] } }, { "index": 1125, "index_chain": 1125, "chain_name": "a", "nt_resnum": 1126, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1126", "linked_nts": [ "///a/1125", "///a/1127" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -70.716, "beta": 177.239, "gamma": 61.480, "delta": 77.165, "epsilon": -115.488, "zeta": -73.788, "epsilon_zeta": -41.700, "bb_type": "--", "chi": -154.064, "glyco_bond": "anti", "C5prime_xyz": [ -1.680, 8.900, 0.137 ], "P_xyz": [ 0.811, 9.680, -0.042 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.934, "theta": -140.955, "eta_prime": -171.616, "theta_prime": -149.576, "eta_base": -127.255, "theta_base": -142.165, "v0": -1.912, "v1": -22.148, "v2": 36.422, "v3": -38.524, "v4": 25.471, "amplitude": 39.099, "phase_angle": 21.325, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.827, "filter_rmsd": 0.063, "frame": { "rmsd": 0.004, "origin": [ 359.705, 199.038, 230.663 ], "x_axis": [ -0.788, 0.370, -0.492 ], "y_axis": [ 0.391, 0.918, 0.065 ], "z_axis": [ 0.476, -0.141, -0.868 ], "quaternion": [ 0.256, 0.201, 0.945, -0.020 ] } }, { "index": 1126, "index_chain": 1126, "chain_name": "a", "nt_resnum": 1127, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1127", "linked_nts": [ "///a/1126", "///a/1128" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -109.717, "beta": 114.434, "gamma": 114.986, "delta": 80.150, "epsilon": -130.639, "zeta": -76.043, "epsilon_zeta": -54.597, "bb_type": "BI", "chi": -177.859, "glyco_bond": "anti", "C5prime_xyz": [ -1.449, 8.424, 1.571 ], "P_xyz": [ 0.062, 9.618, -0.198 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 147.146, "theta": -148.525, "eta_prime": 161.457, "theta_prime": -149.090, "eta_base": -176.592, "theta_base": -96.609, "v0": 3.733, "v1": -26.315, "v2": 37.751, "v3": -36.595, "v4": 20.727, "amplitude": 38.777, "phase_angle": 13.211, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.008, "origin": [ 360.831, 197.721, 227.728 ], "x_axis": [ -0.789, 0.614, 0.004 ], "y_axis": [ 0.611, 0.785, 0.100 ], "z_axis": [ 0.058, 0.082, -0.995 ], "quaternion": [ 0.014, 0.324, 0.945, 0.048 ] } }, { "index": 1127, "index_chain": 1127, "chain_name": "a", "nt_resnum": 1128, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1128", "linked_nts": [ "///a/1127", "///a/1129" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -51.970, "beta": 160.077, "gamma": 49.431, "delta": 81.240, "epsilon": -106.087, "zeta": -107.988, "epsilon_zeta": 1.901, "bb_type": "--", "chi": -163.655, "glyco_bond": "anti", "C5prime_xyz": [ -1.234, 8.695, 0.776 ], "P_xyz": [ 1.388, 8.733, 0.922 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.550, "theta": -138.236, "eta_prime": -167.987, "theta_prime": -132.949, "eta_base": -99.649, "theta_base": -95.012, "v0": 3.418, "v1": -25.332, "v2": 36.591, "v3": -35.506, "v4": 20.209, "amplitude": 37.626, "phase_angle": 13.465, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.696, "filter_rmsd": 0.069, "frame": { "rmsd": 0.009, "origin": [ 358.846, 199.879, 224.881 ], "x_axis": [ 0.026, 0.997, 0.066 ], "y_axis": [ 0.999, -0.023, -0.044 ], "z_axis": [ -0.043, 0.067, -0.997 ], "quaternion": [ -0.039, 0.715, 0.698, 0.008 ] } }, { "index": 1128, "index_chain": 1128, "chain_name": "a", "nt_resnum": 1129, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1129", "linked_nts": [ "///a/1128", "///a/1130" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,helix-end", "alpha": -47.473, "beta": 127.031, "gamma": 62.152, "delta": 81.577, "epsilon": -99.259, "zeta": -158.524, "epsilon_zeta": 59.265, "bb_type": "BII", "chi": -155.065, "glyco_bond": "anti", "C5prime_xyz": [ -1.513, 8.849, 0.212 ], "P_xyz": [ 0.901, 8.710, -0.777 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.813, "theta": -160.341, "eta_prime": -172.799, "theta_prime": 159.437, "eta_base": -125.386, "theta_base": 100.266, "v0": -0.459, "v1": -22.154, "v2": 35.017, "v3": -36.182, "v4": 23.136, "amplitude": 37.089, "phase_angle": 19.244, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.728, "filter_rmsd": 0.063, "frame": { "rmsd": 0.005, "origin": [ 358.998, 201.567, 222.279 ], "x_axis": [ 0.588, 0.790, 0.176 ], "y_axis": [ 0.787, -0.508, -0.350 ], "z_axis": [ -0.187, 0.344, -0.920 ], "quaternion": [ -0.200, 0.868, 0.454, -0.003 ] } }, { "index": 1129, "index_chain": 1129, "chain_name": "a", "nt_resnum": 1130, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1130", "linked_nts": [ "///a/1129", "///a/1131" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": 87.467, "beta": -125.978, "gamma": 103.105, "delta": 148.702, "epsilon": -102.040, "zeta": -113.661, "epsilon_zeta": 11.621, "bb_type": "--", "chi": -152.097, "glyco_bond": "anti", "C5prime_xyz": [ -2.032, 8.656, 0.547 ], "P_xyz": [ 0.192, 8.253, 1.897 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 63.976, "theta": -39.719, "eta_prime": 91.412, "theta_prime": -61.914, "eta_base": 72.568, "theta_base": -42.928, "v0": -22.287, "v1": 37.226, "v2": -37.028, "v3": 25.032, "v4": -1.948, "amplitude": 38.507, "phase_angle": 164.067, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.102, "frame": { "rmsd": 0.004, "origin": [ 359.697, 189.358, 217.663 ], "x_axis": [ 0.884, -0.366, 0.290 ], "y_axis": [ 0.466, 0.744, -0.480 ], "z_axis": [ -0.040, 0.559, 0.828 ], "quaternion": [ 0.929, -0.279, -0.089, -0.224 ] } }, { "index": 1130, "index_chain": 1130, "chain_name": "a", "nt_resnum": 1131, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1131", "linked_nts": [ "///a/1130", "///a/1132" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": 30.708, "beta": 118.798, "gamma": 4.136, "delta": 145.109, "epsilon": -80.430, "zeta": 112.368, "epsilon_zeta": 167.202, "bb_type": "--", "chi": -113.124, "glyco_bond": "anti", "C5prime_xyz": [ -1.950, 8.446, -1.597 ], "P_xyz": [ 0.171, 9.275, -0.247 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.110, "theta": 133.810, "eta_prime": -130.691, "theta_prime": 92.809, "eta_base": -106.849, "theta_base": 77.379, "v0": -22.576, "v1": 35.805, "v2": -34.654, "v3": 22.548, "v4": -0.171, "amplitude": 36.539, "phase_angle": 161.511, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.064, "frame": { "rmsd": 0.005, "origin": [ 362.597, 201.376, 219.855 ], "x_axis": [ 0.822, -0.271, -0.500 ], "y_axis": [ -0.569, -0.364, -0.737 ], "z_axis": [ 0.018, 0.891, -0.454 ], "quaternion": [ 0.501, -0.812, 0.258, 0.149 ] } }, { "index": 1131, "index_chain": 1131, "chain_name": "a", "nt_resnum": 1132, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1132", "linked_nts": [ "///a/1131", "///a/1133" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,non-canonical,helix-end", "alpha": 164.673, "beta": 139.186, "gamma": 78.129, "delta": 82.403, "epsilon": -111.436, "zeta": -91.182, "epsilon_zeta": -20.254, "bb_type": "--", "chi": 73.650, "glyco_bond": "syn", "C5prime_xyz": [ -4.975, 4.867, 2.363 ], "P_xyz": [ -3.863, 3.565, 4.355 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 104.840, "theta": -136.339, "eta_prime": 101.142, "theta_prime": -144.013, "eta_base": 108.679, "theta_base": -163.093, "v0": -4.211, "v1": -17.825, "v2": 31.688, "v3": -35.071, "v4": 24.773, "amplitude": 35.068, "phase_angle": 25.363, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 358.270, 197.199, 219.602 ], "x_axis": [ 0.574, -0.715, -0.398 ], "y_axis": [ -0.819, -0.508, -0.268 ], "z_axis": [ -0.011, 0.480, -0.877 ], "quaternion": [ -0.217, 0.860, -0.446, -0.119 ] } }, { "index": 1132, "index_chain": 1132, "chain_name": "a", "nt_resnum": 1133, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1133", "linked_nts": [ "///a/1132", "///a/1134" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix,multiplet", "alpha": -68.249, "beta": 136.483, "gamma": -178.076, "delta": 147.051, "epsilon": -76.569, "zeta": 104.641, "epsilon_zeta": 178.791, "bb_type": "--", "chi": -133.398, "glyco_bond": "anti", "C5prime_xyz": [ -2.051, 8.741, -0.513 ], "P_xyz": [ -1.450, 10.518, -2.342 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -31.372, "theta": 76.934, "eta_prime": -43.011, "theta_prime": 82.474, "eta_base": -88.013, "theta_base": 66.174, "v0": -24.166, "v1": 37.827, "v2": -36.208, "v3": 23.221, "v4": 0.367, "amplitude": 38.376, "phase_angle": 160.647, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.008, "frame": { "rmsd": 0.008, "origin": [ 357.142, 198.509, 231.013 ], "x_axis": [ 0.063, 0.963, 0.262 ], "y_axis": [ -0.719, 0.226, -0.657 ], "z_axis": [ -0.692, -0.147, 0.707 ], "quaternion": [ 0.706, -0.181, -0.338, 0.595 ] } }, { "index": 1133, "index_chain": 1133, "chain_name": "a", "nt_resnum": 1134, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1134", "linked_nts": [ "///a/1133", "///a/1135" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI,canonical,helix,stem-end", "alpha": 163.209, "beta": -149.294, "gamma": 45.765, "delta": 79.979, "epsilon": -144.544, "zeta": -65.769, "epsilon_zeta": -78.775, "bb_type": "BI", "chi": -172.168, "glyco_bond": "anti", "C5prime_xyz": [ -1.513, 8.652, 1.217 ], "P_xyz": [ 0.559, 9.031, 2.774 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 110.688, "theta": -140.573, "eta_prime": 94.820, "theta_prime": -134.205, "eta_base": 89.345, "theta_base": -99.308, "v0": 0.995, "v1": -23.619, "v2": 36.006, "v3": -36.387, "v4": 22.334, "amplitude": 37.673, "phase_angle": 17.108, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "6g", "suiteness": 0.021, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 359.729, 197.703, 223.736 ], "x_axis": [ -0.370, 0.864, 0.342 ], "y_axis": [ -0.926, -0.311, -0.215 ], "z_axis": [ -0.080, -0.396, 0.915 ], "quaternion": [ 0.555, 0.081, -0.190, 0.806 ] } }, { "index": 1134, "index_chain": 1134, "chain_name": "a", "nt_resnum": 1135, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1135", "linked_nts": [ "///a/1134", "///a/1136" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -69.574, "beta": 176.411, "gamma": 55.787, "delta": 75.361, "epsilon": -149.546, "zeta": -82.418, "epsilon_zeta": -67.128, "bb_type": "BI", "chi": -163.326, "glyco_bond": "anti", "C5prime_xyz": [ -1.740, 8.814, 0.692 ], "P_xyz": [ 0.734, 9.621, 0.934 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.276, "theta": -160.073, "eta_prime": 179.728, "theta_prime": -159.151, "eta_base": -132.744, "theta_base": -137.789, "v0": -1.725, "v1": -23.191, "v2": 37.987, "v3": -39.970, "v4": 26.184, "amplitude": 40.668, "phase_angle": 20.919, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.885, "filter_rmsd": 0.102, "frame": { "rmsd": 0.008, "origin": [ 360.288, 198.460, 227.592 ], "x_axis": [ -0.841, 0.535, 0.082 ], "y_axis": [ -0.531, -0.784, -0.322 ], "z_axis": [ -0.109, -0.314, 0.943 ], "quaternion": [ 0.282, -0.007, -0.169, 0.944 ] } }, { "index": 1135, "index_chain": 1135, "chain_name": "a", "nt_resnum": 1136, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1136", "linked_nts": [ "///a/1135", "///a/1137" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -63.210, "beta": 160.069, "gamma": 62.491, "delta": 78.159, "epsilon": -139.417, "zeta": -45.001, "epsilon_zeta": -94.416, "bb_type": "BI", "chi": -172.553, "glyco_bond": "anti", "C5prime_xyz": [ -1.546, 8.661, 1.201 ], "P_xyz": [ 1.014, 9.205, 1.110 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.383, "theta": -114.304, "eta_prime": 177.501, "theta_prime": -110.638, "eta_base": -149.874, "theta_base": -69.419, "v0": 1.612, "v1": -25.328, "v2": 38.173, "v3": -38.205, "v4": 23.044, "amplitude": 39.767, "phase_angle": 16.280, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.720, "filter_rmsd": 0.008, "frame": { "rmsd": 0.008, "origin": [ 360.686, 199.000, 231.090 ], "x_axis": [ -0.969, 0.166, -0.181 ], "y_axis": [ -0.111, -0.954, -0.280 ], "z_axis": [ -0.219, -0.251, 0.943 ], "quaternion": [ 0.070, -0.102, -0.135, 0.983 ] } }, { "index": 1136, "index_chain": 1136, "chain_name": "a", "nt_resnum": 1137, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1137", "linked_nts": [ "///a/1136", "///a/1138" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -85.712, "beta": 163.418, "gamma": 88.497, "delta": 78.224, "epsilon": -141.022, "zeta": -82.122, "epsilon_zeta": -58.899, "bb_type": "BI", "chi": -172.376, "glyco_bond": "anti", "C5prime_xyz": [ -1.421, 8.638, 1.244 ], "P_xyz": [ 1.033, 9.345, 0.615 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.342, "theta": -150.850, "eta_prime": -156.698, "theta_prime": -151.842, "eta_base": -82.295, "theta_base": -122.455, "v0": 2.660, "v1": -25.794, "v2": 37.947, "v3": -37.362, "v4": 21.902, "amplitude": 39.245, "phase_angle": 14.779, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 354.896, 197.417, 233.219 ], "x_axis": [ -0.575, -0.808, -0.127 ], "y_axis": [ 0.810, -0.585, 0.052 ], "z_axis": [ -0.116, -0.073, 0.991 ], "quaternion": [ -0.456, -0.069, -0.006, 0.888 ] } }, { "index": 1137, "index_chain": 1137, "chain_name": "a", "nt_resnum": 1138, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1138", "linked_nts": [ "///a/1137", "///a/1139" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix-end,stem-end,multiplet", "alpha": -54.160, "beta": 161.279, "gamma": 54.283, "delta": 81.455, "epsilon": -134.052, "zeta": -81.584, "epsilon_zeta": -52.468, "bb_type": "BI", "chi": -170.425, "glyco_bond": "anti", "C5prime_xyz": [ -1.372, 8.604, 1.151 ], "P_xyz": [ 1.221, 8.841, 1.363 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.940, "theta": -139.894, "eta_prime": -174.450, "theta_prime": -130.631, "eta_base": -130.292, "theta_base": -97.753, "v0": 2.778, "v1": -24.663, "v2": 36.015, "v3": -35.377, "v4": 20.576, "amplitude": 37.188, "phase_angle": 14.425, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.793, "filter_rmsd": 0.008, "frame": { "rmsd": 0.008, "origin": [ 352.843, 197.129, 236.135 ], "x_axis": [ 0.007, -0.991, -0.131 ], "y_axis": [ 0.990, -0.011, 0.142 ], "z_axis": [ -0.142, -0.130, 0.981 ], "quaternion": [ 0.703, 0.097, -0.004, -0.705 ] } }, { "index": 1138, "index_chain": 1138, "chain_name": "a", "nt_resnum": 1139, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1139", "linked_nts": [ "///a/1138", "///a/1140" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -58.383, "beta": 170.710, "gamma": 70.634, "delta": 146.257, "epsilon": -105.194, "zeta": 124.742, "epsilon_zeta": 130.064, "bb_type": "--", "chi": -109.361, "glyco_bond": "anti", "C5prime_xyz": [ -1.879, 8.305, -1.771 ], "P_xyz": [ 0.711, 8.664, -1.972 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -159.966, "theta": 128.894, "eta_prime": -132.129, "theta_prime": 97.421, "eta_base": -99.705, "theta_base": 103.308, "v0": -20.064, "v1": 34.261, "v2": -34.528, "v3": 23.892, "v4": -2.621, "amplitude": 35.691, "phase_angle": 165.334, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.673, "filter_rmsd": 0.060, "frame": { "rmsd": 0.006, "origin": [ 352.093, 195.629, 237.907 ], "x_axis": [ 0.604, -0.790, -0.109 ], "y_axis": [ 0.642, 0.400, 0.654 ], "z_axis": [ -0.473, -0.465, 0.748 ], "quaternion": [ 0.829, 0.337, -0.110, -0.431 ] } }, { "index": 1139, "index_chain": 1139, "chain_name": "a", "nt_resnum": 1140, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1140", "linked_nts": [ "///a/1139", "///a/1141" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -59.572, "beta": 176.136, "gamma": -43.917, "delta": 85.068, "epsilon": -146.938, "zeta": -47.606, "epsilon_zeta": -99.331, "bb_type": "BI", "chi": -164.105, "glyco_bond": "anti", "C5prime_xyz": [ -1.147, 8.506, 0.738 ], "P_xyz": [ 0.302, 10.156, 2.133 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 132.705, "theta": -148.015, "eta_prime": 116.798, "theta_prime": -132.326, "eta_base": 128.227, "theta_base": -79.265, "v0": 7.641, "v1": -28.574, "v2": 37.437, "v3": -33.933, "v4": 16.708, "amplitude": 37.729, "phase_angle": 7.137, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23m", "cluster": "0k", "suiteness": 0.026, "filter_rmsd": 0.037, "frame": { "rmsd": 0.009, "origin": [ 351.513, 204.358, 234.716 ], "x_axis": [ 0.047, -0.994, -0.104 ], "y_axis": [ 0.416, -0.075, 0.906 ], "z_axis": [ -0.908, -0.086, 0.410 ], "quaternion": [ 0.588, 0.422, -0.342, -0.600 ] } }, { "index": 1140, "index_chain": 1140, "chain_name": "a", "nt_resnum": 1141, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1141", "linked_nts": [ "///a/1140", "///a/1142" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -88.899, "beta": 161.917, "gamma": 96.096, "delta": 79.712, "epsilon": -126.150, "zeta": -82.277, "epsilon_zeta": -43.873, "bb_type": "--", "chi": -153.112, "glyco_bond": "anti", "C5prime_xyz": [ -1.466, 8.823, 0.106 ], "P_xyz": [ 0.682, 9.363, -1.305 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.368, "theta": -144.908, "eta_prime": -151.984, "theta_prime": -148.191, "eta_base": -89.963, "theta_base": -121.984, "v0": 1.130, "v1": -23.730, "v2": 36.105, "v3": -36.370, "v4": 22.268, "amplitude": 37.737, "phase_angle": 16.908, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.065, "frame": { "rmsd": 0.008, "origin": [ 348.917, 200.056, 235.861 ], "x_axis": [ -0.023, -0.715, 0.699 ], "y_axis": [ -0.014, 0.699, 0.715 ], "z_axis": [ -1.000, 0.007, -0.026 ], "quaternion": [ 0.642, 0.276, -0.661, -0.273 ] } }, { "index": 1141, "index_chain": 1141, "chain_name": "a", "nt_resnum": 1142, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1142", "linked_nts": [ "///a/1141", "///a/1143" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical", "alpha": -75.005, "beta": 153.121, "gamma": 71.453, "delta": 76.650, "epsilon": -136.038, "zeta": -55.500, "epsilon_zeta": -80.538, "bb_type": "BI", "chi": -165.487, "glyco_bond": "anti", "C5prime_xyz": [ -1.527, 8.759, 0.823 ], "P_xyz": [ 0.932, 9.327, 0.178 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.411, "theta": -122.167, "eta_prime": 173.782, "theta_prime": -121.057, "eta_base": -143.606, "theta_base": -69.499, "v0": 0.358, "v1": -24.816, "v2": 38.608, "v3": -39.332, "v4": 24.572, "amplitude": 40.608, "phase_angle": 18.054, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.330, "filter_rmsd": 0.106, "frame": { "rmsd": 0.008, "origin": [ 345.335, 198.556, 236.860 ], "x_axis": [ 0.380, -0.193, 0.905 ], "y_axis": [ -0.078, 0.968, 0.239 ], "z_axis": [ -0.922, -0.162, 0.352 ], "quaternion": [ 0.822, 0.122, -0.556, -0.035 ] } }, { "index": 1142, "index_chain": 1142, "chain_name": "a", "nt_resnum": 1143, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1143", "linked_nts": [ "///a/1142", "///a/1144" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,multiplet", "alpha": -76.431, "beta": 165.571, "gamma": 71.864, "delta": 79.778, "epsilon": -136.656, "zeta": -79.071, "epsilon_zeta": -57.586, "bb_type": "BI", "chi": -159.252, "glyco_bond": "anti", "C5prime_xyz": [ -1.380, 8.795, 0.470 ], "P_xyz": [ 1.155, 9.197, -0.067 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.819, "theta": -141.029, "eta_prime": -167.560, "theta_prime": -141.689, "eta_base": -90.865, "theta_base": -110.748, "v0": 1.869, "v1": -24.884, "v2": 37.205, "v3": -37.008, "v4": 22.185, "amplitude": 38.669, "phase_angle": 15.818, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.379, "filter_rmsd": 0.069, "frame": { "rmsd": 0.010, "origin": [ 344.677, 198.788, 242.044 ], "x_axis": [ 0.139, 0.734, 0.665 ], "y_axis": [ -0.576, 0.606, -0.548 ], "z_axis": [ -0.805, -0.307, 0.507 ], "quaternion": [ 0.750, -0.080, -0.490, 0.436 ] } }, { "index": 1143, "index_chain": 1143, "chain_name": "a", "nt_resnum": 1144, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1144", "linked_nts": [ "///a/1143", "///a/1145" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -56.606, "beta": 158.505, "gamma": 56.633, "delta": 79.786, "epsilon": -143.620, "zeta": -67.549, "epsilon_zeta": -76.071, "bb_type": "BI", "chi": -162.036, "glyco_bond": "anti", "C5prime_xyz": [ -1.558, 8.774, 0.633 ], "P_xyz": [ 1.001, 9.254, 0.557 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.187, "theta": -136.306, "eta_prime": -176.298, "theta_prime": -131.100, "eta_base": -128.443, "theta_base": -122.505, "v0": -0.318, "v1": -22.878, "v2": 36.061, "v3": -37.192, "v4": 23.696, "amplitude": 38.150, "phase_angle": 19.053, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.799, "filter_rmsd": 0.104, "frame": { "rmsd": 0.011, "origin": [ 342.737, 198.770, 245.158 ], "x_axis": [ -0.042, 0.995, 0.096 ], "y_axis": [ -0.628, 0.049, -0.777 ], "z_axis": [ -0.777, -0.093, 0.623 ], "quaternion": [ 0.638, -0.268, -0.342, 0.636 ] } }, { "index": 1144, "index_chain": 1144, "chain_name": "a", "nt_resnum": 1145, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1145", "linked_nts": [ "///a/1144", "///a/1146" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end,stem-end", "alpha": -70.053, "beta": -178.116, "gamma": 62.396, "delta": 147.472, "epsilon": -117.320, "zeta": -135.348, "epsilon_zeta": 18.028, "bb_type": "--", "chi": -111.486, "glyco_bond": "anti", "C5prime_xyz": [ -2.520, 8.384, -1.603 ], "P_xyz": [ -0.216, 9.631, -1.544 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -176.697, "theta": -122.615, "eta_prime": -146.370, "theta_prime": -162.950, "eta_base": -132.513, "theta_base": -135.894, "v0": -26.852, "v1": 40.940, "v2": -38.442, "v3": 23.927, "v4": 1.626, "amplitude": 41.185, "phase_angle": 158.968, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.850, "filter_rmsd": 0.038, "frame": { "rmsd": 0.008, "origin": [ 342.067, 199.327, 247.449 ], "x_axis": [ -0.009, 0.858, -0.514 ], "y_axis": [ -0.836, -0.289, -0.467 ], "z_axis": [ -0.549, 0.426, 0.719 ], "quaternion": [ 0.596, -0.374, -0.015, 0.710 ] } }, { "index": 1145, "index_chain": 1145, "chain_name": "a", "nt_resnum": 1146, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1146", "linked_nts": [ "///a/1145", "///a/1147" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 44.593, "beta": -129.225, "gamma": -147.800, "delta": 78.874, "epsilon": -146.723, "zeta": -67.659, "epsilon_zeta": -79.064, "bb_type": "BI", "chi": -164.305, "glyco_bond": "anti", "C5prime_xyz": [ -1.717, 8.803, 0.723 ], "P_xyz": [ -1.296, 10.625, -1.127 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 136.278, "theta": 179.067, "eta_prime": 138.910, "theta_prime": -171.554, "eta_base": -179.548, "theta_base": -123.088, "v0": -3.285, "v1": -20.289, "v2": 34.893, "v3": -37.662, "v4": 25.806, "amplitude": 38.019, "phase_angle": 23.396, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "4n", "suiteness": 0.152, "filter_rmsd": 0.041, "frame": { "rmsd": 0.010, "origin": [ 341.315, 200.709, 251.119 ], "x_axis": [ -0.332, 0.670, -0.664 ], "y_axis": [ -0.701, -0.646, -0.301 ], "z_axis": [ -0.631, 0.366, 0.684 ], "quaternion": [ 0.420, -0.397, 0.020, 0.816 ] } }, { "index": 1146, "index_chain": 1146, "chain_name": "a", "nt_resnum": 1147, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1147", "linked_nts": [ "///a/1146", "///a/1148" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -74.378, "beta": 167.549, "gamma": 62.764, "delta": 80.790, "epsilon": -148.790, "zeta": -30.267, "epsilon_zeta": -118.523, "bb_type": "BI", "chi": -168.694, "glyco_bond": "anti", "C5prime_xyz": [ -1.481, 8.659, 1.005 ], "P_xyz": [ 1.100, 9.149, 1.012 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.401, "theta": -121.157, "eta_prime": -179.909, "theta_prime": -136.953, "eta_base": -117.525, "theta_base": -129.758, "v0": 1.790, "v1": -24.421, "v2": 36.409, "v3": -36.310, "v4": 21.802, "amplitude": 37.856, "phase_angle": 15.892, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.796, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 338.822, 203.593, 251.904 ], "x_axis": [ -0.633, -0.018, -0.774 ], "y_axis": [ -0.308, -0.911, 0.273 ], "z_axis": [ -0.710, 0.411, 0.572 ], "quaternion": [ 0.082, -0.420, 0.194, 0.883 ] } }, { "index": 1147, "index_chain": 1147, "chain_name": "a", "nt_resnum": 1148, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1148", "linked_nts": [ "///a/1147", "///a/1149" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -139.330, "beta": 110.838, "gamma": 158.396, "delta": 83.119, "epsilon": -132.777, "zeta": -114.075, "epsilon_zeta": -18.701, "bb_type": "--", "chi": 177.891, "glyco_bond": "anti", "C5prime_xyz": [ -1.058, 8.248, 1.835 ], "P_xyz": [ -0.462, 10.518, 0.692 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.510, "theta": -176.070, "eta_prime": -177.113, "theta_prime": -168.960, "eta_base": -148.619, "theta_base": -136.147, "v0": 5.789, "v1": -26.391, "v2": 35.881, "v3": -33.511, "v4": 17.480, "amplitude": 36.398, "phase_angle": 9.667, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.010, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 337.239, 207.296, 251.931 ], "x_axis": [ -0.712, -0.325, -0.622 ], "y_axis": [ -0.153, -0.793, 0.589 ], "z_axis": [ -0.686, 0.514, 0.515 ], "quaternion": [ -0.050, -0.376, 0.317, 0.869 ] } }, { "index": 1148, "index_chain": 1148, "chain_name": "a", "nt_resnum": 1149, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1149", "linked_nts": [ "///a/1148", "///a/1150" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 149.090, "beta": -125.433, "gamma": 164.094, "delta": 81.515, "epsilon": -115.260, "zeta": -76.627, "epsilon_zeta": -38.633, "bb_type": "--", "chi": 176.470, "glyco_bond": "anti", "C5prime_xyz": [ -1.372, 8.290, 1.872 ], "P_xyz": [ 0.779, 9.124, 0.665 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.577, "theta": -128.890, "eta_prime": 175.319, "theta_prime": -130.347, "eta_base": -142.320, "theta_base": -83.493, "v0": 2.585, "v1": -24.411, "v2": 35.774, "v3": -35.274, "v4": 20.604, "amplitude": 36.984, "phase_angle": 14.699, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.010, "filter_rmsd": 0.045, "frame": { "rmsd": 0.014, "origin": [ 335.002, 209.720, 251.811 ], "x_axis": [ -0.623, -0.748, -0.227 ], "y_axis": [ 0.153, -0.401, 0.903 ], "z_axis": [ -0.767, 0.528, 0.364 ], "quaternion": [ -0.291, -0.321, 0.463, 0.773 ] } }, { "index": 1149, "index_chain": 1149, "chain_name": "a", "nt_resnum": 1150, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1150", "linked_nts": [ "///a/1149", "///a/1151" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -53.977, "beta": 169.325, "gamma": 41.054, "delta": 83.839, "epsilon": -109.693, "zeta": -61.240, "epsilon_zeta": -48.453, "bb_type": "--", "chi": -158.970, "glyco_bond": "anti", "C5prime_xyz": [ -1.177, 8.650, 0.497 ], "P_xyz": [ 1.403, 8.816, 0.909 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.580, "theta": -102.807, "eta_prime": -173.833, "theta_prime": -147.763, "eta_base": -109.624, "theta_base": 151.541, "v0": 4.708, "v1": -25.586, "v2": 35.558, "v3": -33.871, "v4": 18.460, "amplitude": 36.272, "phase_angle": 11.385, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.344, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 330.597, 208.869, 252.800 ], "x_axis": [ -0.043, -0.819, 0.572 ], "y_axis": [ 0.536, 0.465, 0.705 ], "z_axis": [ -0.843, 0.337, 0.418 ], "quaternion": [ 0.678, 0.136, -0.522, -0.499 ] } }, { "index": 1150, "index_chain": 1150, "chain_name": "a", "nt_resnum": 1151, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1151", "linked_nts": [ "///a/1150", "///a/1152" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -156.186, "beta": 120.146, "gamma": 59.166, "delta": 145.513, "epsilon": -67.435, "zeta": 96.479, "epsilon_zeta": 196.086, "bb_type": "--", "chi": -142.989, "glyco_bond": "anti", "C5prime_xyz": [ -1.971, 8.709, -0.033 ], "P_xyz": [ 0.557, 8.387, 0.562 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 60.346, "theta": 114.178, "eta_prime": 108.365, "theta_prime": 65.314, "eta_base": 70.878, "theta_base": 31.588, "v0": -22.344, "v1": 35.971, "v2": -35.047, "v3": 23.161, "v4": -0.765, "amplitude": 36.785, "phase_angle": 162.317, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1z", "suiteness": 0.034, "filter_rmsd": 0.038, "frame": { "rmsd": 0.016, "origin": [ 329.419, 220.287, 252.045 ], "x_axis": [ 0.921, 0.387, 0.041 ], "y_axis": [ 0.168, -0.492, 0.854 ], "z_axis": [ 0.351, -0.780, -0.518 ], "quaternion": [ 0.477, 0.856, 0.162, 0.115 ] } }, { "index": 1151, "index_chain": 1151, "chain_name": "a", "nt_resnum": 1152, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1152", "linked_nts": [ "///a/1151", "///a/1153" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -172.467, "beta": 128.963, "gamma": 100.251, "delta": 77.798, "epsilon": -115.648, "zeta": -93.616, "epsilon_zeta": -22.031, "bb_type": "--", "chi": -97.792, "glyco_bond": "anti", "C5prime_xyz": [ -2.947, 7.771, -2.641 ], "P_xyz": [ -2.624, 6.488, -4.905 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 133.384, "theta": -110.444, "eta_prime": 127.123, "theta_prime": -123.457, "eta_base": 109.129, "theta_base": -105.145, "v0": -7.321, "v1": -16.897, "v2": 33.222, "v3": -38.364, "v4": 28.867, "amplitude": 38.140, "phase_angle": 29.418, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.064, "frame": { "rmsd": 0.012, "origin": [ 331.392, 219.791, 259.588 ], "x_axis": [ -0.104, 0.719, -0.687 ], "y_axis": [ -0.994, -0.058, 0.090 ], "z_axis": [ 0.026, 0.693, 0.721 ], "quaternion": [ 0.624, -0.241, 0.285, 0.686 ] } }, { "index": 1152, "index_chain": 1152, "chain_name": "a", "nt_resnum": 1153, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1153", "linked_nts": [ "///a/1152", "///a/1154" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,BII", "alpha": 123.480, "beta": -126.854, "gamma": -82.852, "delta": 149.910, "epsilon": -81.800, "zeta": 129.333, "epsilon_zeta": 148.867, "bb_type": "BII", "chi": 51.445, "glyco_bond": "syn", "C5prime_xyz": [ -5.516, 4.226, 0.829 ], "P_xyz": [ -7.738, 4.003, 2.207 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -70.828, "theta": 92.410, "eta_prime": -61.810, "theta_prime": 104.966, "eta_base": -62.358, "theta_base": 115.268, "v0": -24.244, "v1": 39.110, "v2": -38.006, "v3": 25.143, "v4": -0.810, "amplitude": 39.902, "phase_angle": 162.268, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.105, "frame": { "rmsd": 0.008, "origin": [ 318.403, 224.050, 255.849 ], "x_axis": [ 0.189, 0.753, -0.631 ], "y_axis": [ 0.775, 0.281, 0.567 ], "z_axis": [ 0.604, -0.596, -0.530 ], "quaternion": [ 0.485, 0.600, 0.637, -0.011 ] } }, { "index": 1153, "index_chain": 1153, "chain_name": "a", "nt_resnum": 1154, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1154", "linked_nts": [ "///a/1153", "///a/1155" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": 177.369, "beta": -164.296, "gamma": 62.214, "delta": 77.652, "epsilon": -143.255, "zeta": -61.785, "epsilon_zeta": -81.469, "bb_type": "BI", "chi": -162.546, "glyco_bond": "anti", "C5prime_xyz": [ -1.647, 8.854, 0.599 ], "P_xyz": [ 0.830, 9.564, 1.106 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 134.096, "theta": -134.161, "eta_prime": 118.628, "theta_prime": -131.407, "eta_base": 147.447, "theta_base": -87.966, "v0": -1.648, "v1": -22.409, "v2": 36.662, "v3": -38.576, "v4": 25.364, "amplitude": 39.255, "phase_angle": 20.941, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "4g", "suiteness": 0.050, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 329.138, 225.581, 256.875 ], "x_axis": [ -0.877, 0.227, -0.423 ], "y_axis": [ -0.480, -0.450, 0.753 ], "z_axis": [ -0.019, 0.864, 0.503 ], "quaternion": [ 0.210, -0.131, 0.481, 0.841 ] } }, { "index": 1154, "index_chain": 1154, "chain_name": "a", "nt_resnum": 1155, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1155", "linked_nts": [ "///a/1154", "///a/1156" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": -79.303, "beta": 174.470, "gamma": 63.814, "delta": 78.261, "epsilon": -150.080, "zeta": -68.922, "epsilon_zeta": -81.158, "bb_type": "BI", "chi": -156.603, "glyco_bond": "anti", "C5prime_xyz": [ -1.637, 8.901, 0.249 ], "P_xyz": [ 0.857, 9.658, 0.039 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.787, "theta": -145.472, "eta_prime": 179.539, "theta_prime": -145.782, "eta_base": -120.822, "theta_base": -121.780, "v0": -2.850, "v1": -20.989, "v2": 35.445, "v3": -38.001, "v4": 25.764, "amplitude": 38.421, "phase_angle": 22.697, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.676, "filter_rmsd": 0.063, "frame": { "rmsd": 0.008, "origin": [ 326.789, 228.647, 256.679 ], "x_axis": [ -0.935, -0.338, 0.103 ], "y_axis": [ 0.210, -0.297, 0.932 ], "z_axis": [ -0.284, 0.893, 0.348 ], "quaternion": [ -0.170, -0.057, 0.568, 0.803 ] } }, { "index": 1155, "index_chain": 1155, "chain_name": "a", "nt_resnum": 1156, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1156", "linked_nts": [ "///a/1155", "///a/1157" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -72.606, "beta": -168.869, "gamma": 42.833, "delta": 78.128, "epsilon": -145.815, "zeta": -77.842, "epsilon_zeta": -67.973, "bb_type": "BI", "chi": -162.691, "glyco_bond": "anti", "C5prime_xyz": [ -1.377, 8.826, 0.652 ], "P_xyz": [ 0.972, 9.500, 1.598 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.740, "theta": -154.503, "eta_prime": 169.705, "theta_prime": -149.749, "eta_base": -154.966, "theta_base": -119.986, "v0": -0.342, "v1": -22.956, "v2": 36.252, "v3": -37.396, "v4": 23.771, "amplitude": 38.355, "phase_angle": 19.062, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.702, "filter_rmsd": 0.064, "frame": { "rmsd": 0.008, "origin": [ 323.943, 232.116, 257.160 ], "x_axis": [ -0.384, -0.870, 0.308 ], "y_axis": [ 0.738, -0.089, 0.669 ], "z_axis": [ -0.555, 0.484, 0.676 ], "quaternion": [ 0.548, 0.084, -0.393, -0.733 ] } }, { "index": 1156, "index_chain": 1156, "chain_name": "a", "nt_resnum": 1157, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1157", "linked_nts": [ "///a/1156", "///a/1158" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -63.549, "beta": 165.436, "gamma": 55.476, "delta": 78.847, "epsilon": -143.632, "zeta": -82.013, "epsilon_zeta": -61.618, "bb_type": "BI", "chi": -168.862, "glyco_bond": "anti", "C5prime_xyz": [ -1.432, 8.683, 1.022 ], "P_xyz": [ 1.139, 9.130, 1.135 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.687, "theta": -150.735, "eta_prime": 176.679, "theta_prime": -149.750, "eta_base": -143.172, "theta_base": -122.723, "v0": 2.072, "v1": -25.389, "v2": 37.760, "v3": -37.517, "v4": 22.374, "amplitude": 39.203, "phase_angle": 15.592, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.920, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 320.965, 233.121, 258.685 ], "x_axis": [ 0.147, -0.865, 0.479 ], "y_axis": [ 0.807, 0.385, 0.448 ], "z_axis": [ -0.572, 0.321, 0.755 ], "quaternion": [ 0.756, 0.042, -0.347, -0.553 ] } }, { "index": 1157, "index_chain": 1157, "chain_name": "a", "nt_resnum": 1158, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1158", "linked_nts": [ "///a/1157", "///a/1159" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -62.643, "beta": 159.573, "gamma": 61.252, "delta": 80.779, "epsilon": -139.022, "zeta": -75.322, "epsilon_zeta": -63.701, "bb_type": "BI", "chi": -173.174, "glyco_bond": "anti", "C5prime_xyz": [ -1.448, 8.593, 1.285 ], "P_xyz": [ 1.151, 8.902, 1.323 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.831, "theta": -137.490, "eta_prime": -178.380, "theta_prime": -136.992, "eta_base": -136.602, "theta_base": -96.097, "v0": 3.063, "v1": -25.479, "v2": 36.984, "v3": -36.181, "v4": 20.896, "amplitude": 38.128, "phase_angle": 14.073, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.788, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 318.178, 232.885, 260.757 ], "x_axis": [ 0.616, -0.553, 0.561 ], "y_axis": [ 0.580, 0.800, 0.152 ], "z_axis": [ -0.533, 0.231, 0.814 ], "quaternion": [ 0.899, -0.022, -0.304, -0.315 ] } }, { "index": 1158, "index_chain": 1158, "chain_name": "a", "nt_resnum": 1159, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1159", "linked_nts": [ "///a/1158", "///a/1160" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -63.920, "beta": 162.796, "gamma": 60.267, "delta": 82.675, "epsilon": -159.491, "zeta": -80.518, "epsilon_zeta": -78.973, "bb_type": "BI", "chi": -162.254, "glyco_bond": "anti", "C5prime_xyz": [ -1.354, 8.684, 0.682 ], "P_xyz": [ 1.263, 8.921, 0.574 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.804, "theta": -132.642, "eta_prime": -175.023, "theta_prime": -134.461, "eta_base": -112.676, "theta_base": -97.494, "v0": 2.978, "v1": -24.398, "v2": 35.391, "v3": -34.555, "v4": 19.935, "amplitude": 36.471, "phase_angle": 13.979, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.858, "filter_rmsd": 0.107, "frame": { "rmsd": 0.009, "origin": [ 317.469, 231.996, 264.004 ], "x_axis": [ 0.833, 0.147, 0.534 ], "y_axis": [ -0.073, 0.985, -0.157 ], "z_axis": [ -0.549, 0.092, 0.831 ], "quaternion": [ 0.955, -0.065, -0.284, 0.058 ] } }, { "index": 1159, "index_chain": 1159, "chain_name": "a", "nt_resnum": 1160, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1160", "linked_nts": [ "///a/1159", "///a/1161" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -140.963, "beta": -136.036, "gamma": 88.475, "delta": 81.577, "epsilon": -117.349, "zeta": -76.776, "epsilon_zeta": -40.574, "bb_type": "--", "chi": -167.438, "glyco_bond": "anti", "C5prime_xyz": [ -1.230, 8.577, 0.983 ], "P_xyz": [ 1.368, 8.242, 1.204 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.984, "theta": -120.446, "eta_prime": 168.033, "theta_prime": -162.722, "eta_base": -143.670, "theta_base": 141.463, "v0": 5.684, "v1": -27.567, "v2": 37.897, "v3": -35.614, "v4": 18.863, "amplitude": 38.519, "phase_angle": 10.314, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 316.962, 232.755, 267.874 ], "x_axis": [ 0.684, 0.684, -0.255 ], "y_axis": [ -0.710, 0.543, -0.448 ], "z_axis": [ -0.168, 0.488, 0.857 ], "quaternion": [ 0.878, -0.267, 0.025, 0.397 ] } }, { "index": 1160, "index_chain": 1160, "chain_name": "a", "nt_resnum": 1161, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1161", "linked_nts": [ "///a/1160", "///a/1162" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -145.927, "beta": 135.938, "gamma": 34.672, "delta": 142.079, "epsilon": -66.437, "zeta": -144.458, "epsilon_zeta": 78.021, "bb_type": "--", "chi": -125.929, "glyco_bond": "anti", "C5prime_xyz": [ -1.699, 8.595, -0.968 ], "P_xyz": [ 0.758, 8.778, -0.077 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 65.325, "theta": -51.159, "eta_prime": 94.868, "theta_prime": -66.907, "eta_base": 58.486, "theta_base": -17.484, "v0": -20.285, "v1": 32.786, "v2": -32.129, "v3": 21.313, "v4": -0.893, "amplitude": 33.658, "phase_angle": 162.665, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1z", "suiteness": 0.144, "filter_rmsd": 0.037, "frame": { "rmsd": 0.006, "origin": [ 304.274, 230.700, 272.082 ], "x_axis": [ -0.568, 0.188, -0.801 ], "y_axis": [ 0.630, 0.726, -0.276 ], "z_axis": [ 0.530, -0.661, -0.531 ], "quaternion": [ 0.396, 0.243, 0.840, -0.279 ] } }, { "index": 1161, "index_chain": 1161, "chain_name": "a", "nt_resnum": 1162, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1162", "linked_nts": [ "///a/1161", "///a/1163" ], "nt_type": "RNA", "dbn": ".", "summary": "turn", "alpha": 104.240, "beta": -85.194, "gamma": -162.162, "delta": 145.994, "epsilon": -69.092, "zeta": 99.758, "epsilon_zeta": 191.150, "bb_type": "--", "chi": -61.894, "glyco_bond": "--", "C5prime_xyz": [ -3.514, 6.678, -3.011 ], "P_xyz": [ -3.797, 4.396, -4.270 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -95.952, "theta": 42.716, "eta_prime": -95.662, "theta_prime": 89.661, "eta_base": -91.920, "theta_base": 82.350, "v0": -23.305, "v1": 36.531, "v2": -35.066, "v3": 22.574, "v4": 0.301, "amplitude": 37.129, "phase_angle": 160.809, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.068, "frame": { "rmsd": 0.007, "origin": [ 312.110, 237.659, 267.369 ], "x_axis": [ 0.450, 0.817, -0.361 ], "y_axis": [ 0.845, -0.258, 0.468 ], "z_axis": [ 0.289, -0.516, -0.806 ], "quaternion": [ 0.310, 0.793, 0.524, -0.023 ] } }, { "index": 1162, "index_chain": 1162, "chain_name": "a", "nt_resnum": 1163, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1163", "linked_nts": [ "///a/1162", "///a/1164" ], "nt_type": "RNA", "dbn": ".", "summary": "BI,non-canonical,helix-end", "alpha": -176.889, "beta": -116.211, "gamma": 37.404, "delta": 141.967, "epsilon": -151.161, "zeta": -78.296, "epsilon_zeta": -72.865, "bb_type": "BI", "chi": -62.480, "glyco_bond": "--", "C5prime_xyz": [ -3.598, 6.573, -3.041 ], "P_xyz": [ -2.277, 8.712, -3.831 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 147.173, "theta": -134.427, "eta_prime": 134.722, "theta_prime": -157.699, "eta_base": 129.859, "theta_base": -116.128, "v0": -25.476, "v1": 37.512, "v2": -34.561, "v3": 20.713, "v4": 2.783, "amplitude": 37.534, "phase_angle": 157.043, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.037, "frame": { "rmsd": 0.014, "origin": [ 307.069, 230.627, 270.186 ], "x_axis": [ -0.027, 0.735, -0.678 ], "y_axis": [ 0.984, -0.101, -0.149 ], "z_axis": [ -0.178, -0.671, -0.720 ], "quaternion": [ 0.195, 0.670, 0.641, -0.319 ] } }, { "index": 1163, "index_chain": 1163, "chain_name": "a", "nt_resnum": 1164, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1164", "linked_nts": [ "///a/1163", "///a/1165" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -114.572, "beta": 83.763, "gamma": 140.237, "delta": 78.297, "epsilon": -109.819, "zeta": -31.385, "epsilon_zeta": -78.434, "bb_type": "--", "chi": -137.476, "glyco_bond": "anti", "C5prime_xyz": [ -1.728, 8.714, -0.837 ], "P_xyz": [ -2.412, 8.724, -3.372 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.159, "theta": -126.431, "eta_prime": 163.475, "theta_prime": -120.951, "eta_base": -148.945, "theta_base": -82.343, "v0": -0.996, "v1": -22.492, "v2": 36.133, "v3": -37.705, "v4": 24.383, "amplitude": 38.465, "phase_angle": 20.052, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.037, "frame": { "rmsd": 0.012, "origin": [ 308.411, 229.788, 266.548 ], "x_axis": [ 0.432, 0.683, -0.589 ], "y_axis": [ 0.864, -0.501, 0.053 ], "z_axis": [ -0.259, -0.531, -0.807 ], "quaternion": [ 0.176, 0.828, 0.467, -0.256 ] } }, { "index": 1164, "index_chain": 1164, "chain_name": "a", "nt_resnum": 1165, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1165", "linked_nts": [ "///a/1164", "///a/1166" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -121.437, "beta": 140.596, "gamma": 128.163, "delta": 84.464, "epsilon": -150.130, "zeta": -69.096, "epsilon_zeta": -81.034, "bb_type": "BI", "chi": -167.556, "glyco_bond": "anti", "C5prime_xyz": [ -1.636, 8.651, 0.946 ], "P_xyz": [ -0.154, 10.031, -0.725 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.839, "theta": -162.670, "eta_prime": -163.106, "theta_prime": -162.473, "eta_base": -101.302, "theta_base": -129.222, "v0": -0.942, "v1": -20.057, "v2": 32.123, "v3": -33.550, "v4": 21.771, "amplitude": 34.210, "phase_angle": 20.114, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.035, "frame": { "rmsd": 0.011, "origin": [ 314.966, 232.291, 263.911 ], "x_axis": [ 0.871, 0.092, 0.482 ], "y_axis": [ 0.036, -0.992, 0.123 ], "z_axis": [ 0.489, -0.090, -0.868 ], "quaternion": [ 0.055, 0.966, 0.033, 0.251 ] } }, { "index": 1165, "index_chain": 1165, "chain_name": "a", "nt_resnum": 1166, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1166", "linked_nts": [ "///a/1165", "///a/1167" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -70.353, "beta": 172.369, "gamma": 58.585, "delta": 81.433, "epsilon": -143.367, "zeta": -82.128, "epsilon_zeta": -61.239, "bb_type": "BI", "chi": -155.914, "glyco_bond": "anti", "C5prime_xyz": [ -1.623, 8.886, 0.247 ], "P_xyz": [ 0.916, 9.524, 0.281 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.074, "theta": -148.695, "eta_prime": -176.159, "theta_prime": -147.804, "eta_base": -130.200, "theta_base": -123.497, "v0": -3.571, "v1": -18.991, "v2": 32.947, "v3": -35.919, "v4": 24.929, "amplitude": 36.102, "phase_angle": 24.132, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.925, "filter_rmsd": 0.062, "frame": { "rmsd": 0.008, "origin": [ 317.480, 233.401, 261.743 ], "x_axis": [ 0.722, -0.524, 0.451 ], "y_axis": [ -0.435, -0.851, -0.293 ], "z_axis": [ 0.538, 0.016, -0.843 ], "quaternion": [ -0.084, 0.924, -0.260, 0.267 ] } }, { "index": 1166, "index_chain": 1166, "chain_name": "a", "nt_resnum": 1167, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1167", "linked_nts": [ "///a/1166", "///a/1168" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -57.833, "beta": 166.346, "gamma": 51.986, "delta": 76.309, "epsilon": -146.657, "zeta": -48.052, "epsilon_zeta": -98.606, "bb_type": "BI", "chi": -162.746, "glyco_bond": "anti", "C5prime_xyz": [ -1.484, 8.855, 0.645 ], "P_xyz": [ 1.057, 9.458, 0.751 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.509, "theta": -130.548, "eta_prime": 178.947, "theta_prime": -139.648, "eta_base": -144.567, "theta_base": -113.759, "v0": -0.127, "v1": -24.188, "v2": 37.981, "v3": -38.989, "v4": 24.668, "amplitude": 40.101, "phase_angle": 18.713, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.843, "filter_rmsd": 0.066, "frame": { "rmsd": 0.008, "origin": [ 321.016, 233.752, 258.567 ], "x_axis": [ 0.277, -0.863, 0.422 ], "y_axis": [ -0.794, -0.453, -0.405 ], "z_axis": [ 0.541, -0.223, -0.811 ], "quaternion": [ -0.057, 0.797, -0.520, 0.302 ] } }, { "index": 1167, "index_chain": 1167, "chain_name": "a", "nt_resnum": 1168, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1168", "linked_nts": [ "///a/1167", "///a/1169" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -134.068, "beta": 139.405, "gamma": 132.240, "delta": 76.752, "epsilon": -128.934, "zeta": -63.815, "epsilon_zeta": -65.118, "bb_type": "BI", "chi": 174.541, "glyco_bond": "anti", "C5prime_xyz": [ -1.033, 8.204, 1.972 ], "P_xyz": [ 0.567, 9.976, 0.872 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.283, "theta": -148.842, "eta_prime": 173.839, "theta_prime": -147.098, "eta_base": -136.704, "theta_base": -117.176, "v0": 7.479, "v1": -30.816, "v2": 41.450, "v3": -38.088, "v4": 19.259, "amplitude": 41.910, "phase_angle": 8.494, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 324.496, 232.278, 257.555 ], "x_axis": [ -0.231, -0.944, 0.237 ], "y_axis": [ -0.787, 0.038, -0.616 ], "z_axis": [ 0.572, -0.329, -0.752 ], "quaternion": [ 0.118, -0.609, 0.711, -0.332 ] } }, { "index": 1168, "index_chain": 1168, "chain_name": "a", "nt_resnum": 1169, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1169", "linked_nts": [ "///a/1168", "///a/1170" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -64.638, "beta": -177.195, "gamma": 53.905, "delta": 74.031, "epsilon": -150.209, "zeta": -82.942, "epsilon_zeta": -67.268, "bb_type": "BI", "chi": -166.755, "glyco_bond": "anti", "C5prime_xyz": [ -1.581, 8.816, 0.846 ], "P_xyz": [ 0.852, 9.692, 1.236 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.642, "theta": -164.728, "eta_prime": -176.481, "theta_prime": -160.329, "eta_base": -128.881, "theta_base": -136.081, "v0": -0.691, "v1": -24.514, "v2": 39.068, "v3": -40.539, "v4": 26.008, "amplitude": 41.461, "phase_angle": 19.561, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.681, "filter_rmsd": 0.008, "frame": { "rmsd": 0.008, "origin": [ 327.427, 228.865, 257.276 ], "x_axis": [ -0.688, -0.705, -0.171 ], "y_axis": [ -0.437, 0.591, -0.678 ], "z_axis": [ 0.579, -0.392, -0.715 ], "quaternion": [ 0.217, -0.330, 0.865, -0.309 ] } }, { "index": 1169, "index_chain": 1169, "chain_name": "a", "nt_resnum": 1170, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1170", "linked_nts": [ "///a/1169", "///a/1171" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -64.835, "beta": 162.273, "gamma": 65.861, "delta": 82.128, "epsilon": -128.107, "zeta": -82.304, "epsilon_zeta": -45.802, "bb_type": "--", "chi": -173.129, "glyco_bond": "anti", "C5prime_xyz": [ -1.418, 8.585, 1.285 ], "P_xyz": [ 1.181, 8.930, 1.360 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.611, "theta": -136.234, "eta_prime": -175.624, "theta_prime": -133.872, "eta_base": -146.173, "theta_base": -84.293, "v0": 0.708, "v1": -22.654, "v2": 34.689, "v3": -35.176, "v4": 21.765, "amplitude": 36.365, "phase_angle": 17.459, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.616, "filter_rmsd": 0.043, "frame": { "rmsd": 0.012, "origin": [ 329.703, 226.433, 256.255 ], "x_axis": [ -0.904, -0.263, -0.336 ], "y_axis": [ -0.034, 0.829, -0.558 ], "z_axis": [ 0.426, -0.493, -0.759 ], "quaternion": [ 0.204, -0.080, 0.934, -0.281 ] } }, { "index": 1170, "index_chain": 1170, "chain_name": "a", "nt_resnum": 1171, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1171", "linked_nts": [ "///a/1170", "///a/1172" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -63.908, "beta": 151.501, "gamma": 64.227, "delta": 83.998, "epsilon": -125.368, "zeta": -75.923, "epsilon_zeta": -49.446, "bb_type": "--", "chi": -156.006, "glyco_bond": "anti", "C5prime_xyz": [ -1.197, 8.691, 0.306 ], "P_xyz": [ 1.327, 8.654, -0.441 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.169, "theta": -122.510, "eta_prime": -173.503, "theta_prime": -121.614, "eta_base": -106.846, "theta_base": -74.797, "v0": 5.102, "v1": -26.044, "v2": 35.901, "v3": -33.908, "v4": 18.218, "amplitude": 36.543, "phase_angle": 10.751, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.542, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 329.025, 224.594, 253.140 ], "x_axis": [ -0.583, 0.348, -0.734 ], "y_axis": [ 0.728, 0.625, -0.282 ], "z_axis": [ 0.361, -0.699, -0.618 ], "quaternion": [ 0.326, 0.320, 0.841, -0.292 ] } }, { "index": 1171, "index_chain": 1171, "chain_name": "a", "nt_resnum": 1172, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1172", "linked_nts": [ "///a/1171", "///a/1173" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -56.535, "beta": 155.270, "gamma": 58.313, "delta": 84.447, "epsilon": -135.482, "zeta": -60.100, "epsilon_zeta": -75.382, "bb_type": "BI", "chi": -152.139, "glyco_bond": "anti", "C5prime_xyz": [ -1.164, 8.689, 0.089 ], "P_xyz": [ 1.406, 8.645, -0.465 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.046, "theta": -107.332, "eta_prime": -169.521, "theta_prime": -157.758, "eta_base": -101.682, "theta_base": 141.574, "v0": 5.226, "v1": -25.641, "v2": 35.159, "v3": -33.109, "v4": 17.634, "amplitude": 35.748, "phase_angle": 10.408, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.603, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 329.073, 225.093, 248.316 ], "x_axis": [ 0.194, 0.830, -0.522 ], "y_axis": [ 0.969, -0.080, 0.234 ], "z_axis": [ 0.152, -0.551, -0.820 ], "quaternion": [ 0.271, 0.724, 0.622, -0.128 ] } }, { "index": 1172, "index_chain": 1172, "chain_name": "a", "nt_resnum": 1173, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1173", "linked_nts": [ "///a/1172", "///a/1174" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI,non-canonical,helix-end", "alpha": 177.155, "beta": 138.572, "gamma": 47.724, "delta": 81.538, "epsilon": -134.033, "zeta": -71.203, "epsilon_zeta": -62.830, "bb_type": "BI", "chi": -157.361, "glyco_bond": "anti", "C5prime_xyz": [ -1.308, 8.685, 0.341 ], "P_xyz": [ 1.270, 8.538, -0.063 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 16.707, "theta": -125.869, "eta_prime": 45.915, "theta_prime": -127.321, "eta_base": 28.863, "theta_base": -85.093, "v0": 3.928, "v1": -26.098, "v2": 37.158, "v3": -35.857, "v4": 20.128, "amplitude": 38.103, "phase_angle": 12.789, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.718, "filter_rmsd": 0.040, "frame": { "rmsd": 0.010, "origin": [ 332.315, 213.532, 250.659 ], "x_axis": [ 0.406, 0.253, 0.878 ], "y_axis": [ 0.481, 0.757, -0.441 ], "z_axis": [ -0.777, 0.602, 0.185 ], "quaternion": [ 0.766, -0.340, -0.540, -0.074 ] } }, { "index": 1173, "index_chain": 1173, "chain_name": "a", "nt_resnum": 1174, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1174", "linked_nts": [ "///a/1173", "///a/1175" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -74.262, "beta": 158.794, "gamma": 73.599, "delta": 84.542, "epsilon": -107.067, "zeta": -124.463, "epsilon_zeta": 17.396, "bb_type": "--", "chi": -152.799, "glyco_bond": "anti", "C5prime_xyz": [ -1.293, 8.679, 0.099 ], "P_xyz": [ 1.165, 8.858, -0.784 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.415, "theta": -130.533, "eta_prime": -167.114, "theta_prime": -121.548, "eta_base": -107.569, "theta_base": -125.689, "v0": 2.944, "v1": -23.881, "v2": 34.535, "v3": -33.752, "v4": 19.501, "amplitude": 35.586, "phase_angle": 13.963, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.342, "filter_rmsd": 0.040, "frame": { "rmsd": 0.010, "origin": [ 331.704, 216.199, 253.355 ], "x_axis": [ 0.696, 0.655, 0.294 ], "y_axis": [ -0.152, 0.534, -0.831 ], "z_axis": [ -0.702, 0.534, 0.472 ], "quaternion": [ 0.822, -0.415, -0.303, 0.246 ] } }, { "index": 1174, "index_chain": 1174, "chain_name": "a", "nt_resnum": 1175, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1175", "linked_nts": [ "///a/1174", "///a/1176" ], "nt_type": "RNA", "dbn": ".", "summary": "BII,non-canonical,helix,multiplet", "alpha": 39.219, "beta": 154.051, "gamma": -8.090, "delta": 153.312, "epsilon": -97.943, "zeta": 162.632, "epsilon_zeta": 99.425, "bb_type": "BII", "chi": -66.691, "glyco_bond": "--", "C5prime_xyz": [ -3.079, 6.667, -3.078 ], "P_xyz": [ -1.359, 8.390, -4.078 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -149.877, "theta": 165.108, "eta_prime": -133.804, "theta_prime": 163.057, "eta_base": -143.560, "theta_base": -123.923, "v0": -19.867, "v1": 36.698, "v2": -38.646, "v3": 28.121, "v4": -5.452, "amplitude": 39.362, "phase_angle": 169.059, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 328.171, 220.666, 256.582 ], "x_axis": [ 0.901, 0.432, -0.023 ], "y_axis": [ -0.264, 0.506, -0.822 ], "z_axis": [ -0.343, 0.747, 0.570 ], "quaternion": [ 0.863, -0.454, -0.093, 0.202 ] } }, { "index": 1175, "index_chain": 1175, "chain_name": "a", "nt_resnum": 1176, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1176", "linked_nts": [ "///a/1175", "///a/1177" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -92.930, "beta": 121.152, "gamma": 78.501, "delta": 144.897, "epsilon": -107.059, "zeta": 86.898, "epsilon_zeta": 166.043, "bb_type": "--", "chi": -108.528, "glyco_bond": "anti", "C5prime_xyz": [ -2.308, 8.333, -1.789 ], "P_xyz": [ 0.093, 7.867, -2.733 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -167.364, "theta": 127.452, "eta_prime": -145.942, "theta_prime": 79.056, "eta_base": -87.783, "theta_base": 58.414, "v0": -24.207, "v1": 37.496, "v2": -35.682, "v3": 22.622, "v4": 0.738, "amplitude": 37.955, "phase_angle": 160.070, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 325.423, 224.597, 256.562 ], "x_axis": [ 0.244, 0.842, -0.481 ], "y_axis": [ -0.801, -0.105, -0.590 ], "z_axis": [ -0.547, 0.529, 0.649 ], "quaternion": [ 0.668, -0.418, -0.025, 0.614 ] } }, { "index": 1176, "index_chain": 1176, "chain_name": "a", "nt_resnum": 1177, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1177", "linked_nts": [ "///a/1176", "///a/1178" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": 49.846, "beta": 121.169, "gamma": 108.156, "delta": 84.294, "epsilon": -153.868, "zeta": 60.086, "epsilon_zeta": 146.045, "bb_type": "--", "chi": -158.281, "glyco_bond": "anti", "C5prime_xyz": [ -1.358, 8.699, 0.439 ], "P_xyz": [ 0.123, 9.177, -1.661 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -17.360, "theta": 0.997, "eta_prime": -11.552, "theta_prime": -58.635, "eta_base": 17.003, "theta_base": -151.662, "v0": 2.385, "v1": -23.282, "v2": 34.055, "v3": -33.623, "v4": 19.730, "amplitude": 35.223, "phase_angle": 14.797, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.108, "frame": { "rmsd": 0.008, "origin": [ 311.557, 212.468, 251.803 ], "x_axis": [ -0.395, 0.651, -0.648 ], "y_axis": [ 0.693, 0.674, 0.255 ], "z_axis": [ 0.603, -0.349, -0.718 ], "quaternion": [ 0.375, 0.403, 0.835, -0.028 ] } }, { "index": 1177, "index_chain": 1177, "chain_name": "a", "nt_resnum": 1178, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1178", "linked_nts": [ "///a/1177", "///a/1179" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": 94.055, "beta": 127.722, "gamma": -3.712, "delta": 79.694, "epsilon": -143.618, "zeta": -67.500, "epsilon_zeta": -76.118, "bb_type": "BI", "chi": -176.888, "glyco_bond": "anti", "C5prime_xyz": [ -1.403, 8.505, 1.506 ], "P_xyz": [ 0.665, 8.180, 3.061 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -92.313, "theta": -135.208, "eta_prime": -35.804, "theta_prime": -130.314, "eta_base": 46.417, "theta_base": -100.352, "v0": 3.348, "v1": -26.162, "v2": 37.815, "v3": -36.845, "v4": 21.082, "amplitude": 38.926, "phase_angle": 13.721, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 325.300, 209.968, 246.386 ], "x_axis": [ 0.228, -0.666, 0.710 ], "y_axis": [ -0.261, 0.661, 0.704 ], "z_axis": [ -0.938, -0.346, -0.023 ], "quaternion": [ 0.683, 0.384, -0.603, -0.148 ] } }, { "index": 1178, "index_chain": 1178, "chain_name": "a", "nt_resnum": 1179, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1179", "linked_nts": [ "///a/1178", "///a/1180" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -78.113, "beta": -170.194, "gamma": 53.271, "delta": 79.917, "epsilon": -148.942, "zeta": -63.211, "epsilon_zeta": -85.732, "bb_type": "BI", "chi": -173.558, "glyco_bond": "anti", "C5prime_xyz": [ -1.519, 8.614, 1.267 ], "P_xyz": [ 0.891, 9.072, 2.169 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.265, "theta": -140.262, "eta_prime": 175.460, "theta_prime": -137.079, "eta_base": -140.885, "theta_base": -107.642, "v0": 2.026, "v1": -25.214, "v2": 37.445, "v3": -37.213, "v4": 22.195, "amplitude": 38.877, "phase_angle": 15.596, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.778, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 322.711, 206.544, 246.083 ], "x_axis": [ 0.298, -0.003, 0.955 ], "y_axis": [ -0.270, 0.959, 0.087 ], "z_axis": [ -0.916, -0.284, 0.285 ], "quaternion": [ 0.797, 0.116, -0.587, 0.084 ] } }, { "index": 1179, "index_chain": 1179, "chain_name": "a", "nt_resnum": 1180, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1180", "linked_nts": [ "///a/1179", "///a/1181" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -79.385, "beta": 169.730, "gamma": 75.587, "delta": 73.609, "epsilon": -140.871, "zeta": -71.386, "epsilon_zeta": -69.484, "bb_type": "BI", "chi": -170.612, "glyco_bond": "anti", "C5prime_xyz": [ -1.528, 8.703, 1.071 ], "P_xyz": [ 0.913, 9.500, 0.618 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.660, "theta": -144.612, "eta_prime": -173.506, "theta_prime": -143.214, "eta_base": -125.998, "theta_base": -110.950, "v0": 2.449, "v1": -28.067, "v2": 41.742, "v3": -41.363, "v4": 24.461, "amplitude": 43.290, "phase_angle": 15.368, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.251, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 320.299, 203.742, 248.536 ], "x_axis": [ -0.111, 0.479, 0.871 ], "y_axis": [ -0.407, 0.777, -0.479 ], "z_axis": [ -0.906, -0.408, 0.109 ], "quaternion": [ 0.666, -0.027, -0.667, 0.333 ] } }, { "index": 1180, "index_chain": 1180, "chain_name": "a", "nt_resnum": 1181, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1181", "linked_nts": [ "///a/1180", "///a/1182" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -64.854, "beta": 170.874, "gamma": 65.889, "delta": 78.845, "epsilon": -143.276, "zeta": -78.496, "epsilon_zeta": -64.781, "bb_type": "BI", "chi": -164.177, "glyco_bond": "anti", "C5prime_xyz": [ -1.537, 8.792, 0.729 ], "P_xyz": [ 0.997, 9.425, 0.656 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.676, "theta": -150.078, "eta_prime": -170.349, "theta_prime": -149.629, "eta_base": -123.159, "theta_base": -116.635, "v0": -0.250, "v1": -23.308, "v2": 36.660, "v3": -37.773, "v4": 23.969, "amplitude": 38.755, "phase_angle": 18.925, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.642, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 318.042, 202.544, 251.625 ], "x_axis": [ -0.240, 0.894, 0.379 ], "y_axis": [ -0.378, 0.273, -0.885 ], "z_axis": [ -0.894, -0.355, 0.272 ], "quaternion": [ 0.571, -0.232, -0.557, 0.556 ] } }, { "index": 1181, "index_chain": 1181, "chain_name": "a", "nt_resnum": 1182, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1182", "linked_nts": [ "///a/1181", "///a/1183" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -76.481, "beta": 160.350, "gamma": 70.863, "delta": 82.996, "epsilon": -135.856, "zeta": -53.269, "epsilon_zeta": -82.587, "bb_type": "BI", "chi": -165.975, "glyco_bond": "anti", "C5prime_xyz": [ -1.304, 8.591, 0.881 ], "P_xyz": [ 1.251, 8.897, 0.442 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.376, "theta": -114.567, "eta_prime": -179.584, "theta_prime": -115.024, "eta_base": -132.465, "theta_base": -77.627, "v0": 3.563, "v1": -25.424, "v2": 36.343, "v3": -35.259, "v4": 20.032, "amplitude": 37.335, "phase_angle": 13.233, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.461, "filter_rmsd": 0.039, "frame": { "rmsd": 0.015, "origin": [ 315.297, 202.188, 253.570 ], "x_axis": [ -0.343, 0.911, -0.228 ], "y_axis": [ -0.273, -0.329, -0.904 ], "z_axis": [ -0.899, -0.248, 0.361 ], "quaternion": [ 0.415, -0.395, -0.404, 0.713 ] } }, { "index": 1182, "index_chain": 1182, "chain_name": "a", "nt_resnum": 1183, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1183", "linked_nts": [ "///a/1182", "///a/1184" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -76.259, "beta": 173.938, "gamma": 69.463, "delta": 80.509, "epsilon": -106.657, "zeta": -93.150, "epsilon_zeta": -13.506, "bb_type": "--", "chi": -149.380, "glyco_bond": "anti", "C5prime_xyz": [ -1.902, 8.833, -0.188 ], "P_xyz": [ 0.522, 9.673, -0.675 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.854, "theta": -89.799, "eta_prime": -159.240, "theta_prime": -96.223, "eta_base": -102.815, "theta_base": -57.029, "v0": -4.876, "v1": -18.701, "v2": 33.698, "v3": -37.395, "v4": 26.661, "amplitude": 37.443, "phase_angle": 25.843, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.455, "filter_rmsd": 0.098, "frame": { "rmsd": 0.010, "origin": [ 311.093, 204.970, 253.361 ], "x_axis": [ -0.390, 0.351, -0.851 ], "y_axis": [ -0.126, -0.936, -0.328 ], "z_axis": [ -0.912, -0.021, 0.410 ], "quaternion": [ 0.144, -0.533, -0.105, 0.827 ] } }, { "index": 1183, "index_chain": 1183, "chain_name": "a", "nt_resnum": 1184, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1184", "linked_nts": [ "///a/1183", "///a/1185" ], "nt_type": "RNA", "dbn": ".", "summary": "", "alpha": 147.681, "beta": -141.051, "gamma": -142.875, "delta": 77.348, "epsilon": -163.766, "zeta": -144.335, "epsilon_zeta": -19.431, "bb_type": "--", "chi": -35.163, "glyco_bond": "--", "C5prime_xyz": [ -4.906, 5.338, -2.607 ], "P_xyz": [ -7.220, 4.148, -2.608 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -161.499, "theta": 81.533, "eta_prime": -144.206, "theta_prime": 113.815, "eta_base": -97.990, "theta_base": 144.169, "v0": -9.319, "v1": -16.065, "v2": 33.486, "v3": -39.949, "v4": 31.189, "amplitude": 39.485, "phase_angle": 31.997, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.025, "frame": { "rmsd": 0.025, "origin": [ 304.765, 199.782, 247.156 ], "x_axis": [ -0.814, 0.345, -0.467 ], "y_axis": [ -0.423, 0.198, 0.884 ], "z_axis": [ 0.397, 0.918, -0.015 ], "quaternion": [ 0.303, -0.027, 0.712, 0.633 ] } }, { "index": 1184, "index_chain": 1184, "chain_name": "a", "nt_resnum": 1185, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1185", "linked_nts": [ "///a/1184", "///a/1186" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -53.155, "beta": 178.395, "gamma": 60.823, "delta": 85.378, "epsilon": -120.604, "zeta": -86.018, "epsilon_zeta": -34.586, "bb_type": "--", "chi": -171.417, "glyco_bond": "anti", "C5prime_xyz": [ -1.226, 8.449, 1.223 ], "P_xyz": [ 1.352, 8.532, 1.673 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -145.382, "theta": -132.128, "eta_prime": -166.201, "theta_prime": -129.487, "eta_base": 174.277, "theta_base": -100.546, "v0": 4.225, "v1": -24.450, "v2": 34.202, "v3": -32.703, "v4": 18.032, "amplitude": 34.944, "phase_angle": 11.836, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "7a", "suiteness": 0.531, "filter_rmsd": 0.041, "frame": { "rmsd": 0.012, "origin": [ 296.726, 204.710, 259.021 ], "x_axis": [ -0.195, 0.065, -0.979 ], "y_axis": [ 0.723, -0.665, -0.188 ], "z_axis": [ -0.663, -0.744, 0.083 ], "quaternion": [ -0.236, -0.589, -0.334, 0.697 ] } }, { "index": 1185, "index_chain": 1185, "chain_name": "a", "nt_resnum": 1186, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1186", "linked_nts": [ "///a/1185", "///a/1187" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -69.080, "beta": 168.085, "gamma": 52.473, "delta": 82.756, "epsilon": -144.195, "zeta": -64.646, "epsilon_zeta": -79.549, "bb_type": "BI", "chi": -163.958, "glyco_bond": "anti", "C5prime_xyz": [ -1.269, 8.727, 0.779 ], "P_xyz": [ 1.306, 8.970, 1.082 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.142, "theta": -96.775, "eta_prime": 173.175, "theta_prime": -101.963, "eta_base": -143.299, "theta_base": -70.120, "v0": 1.294, "v1": -23.223, "v2": 35.058, "v3": -35.269, "v4": 21.440, "amplitude": 36.585, "phase_angle": 16.613, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.519, "filter_rmsd": 0.068, "frame": { "rmsd": 0.011, "origin": [ 293.492, 202.615, 258.003 ], "x_axis": [ 0.581, -0.049, -0.813 ], "y_axis": [ 0.639, -0.591, 0.492 ], "z_axis": [ -0.505, -0.805, -0.312 ], "quaternion": [ 0.412, 0.788, 0.187, -0.418 ] } }, { "index": 1186, "index_chain": 1186, "chain_name": "a", "nt_resnum": 1187, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1187", "linked_nts": [ "///a/1186", "///a/1188" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix", "alpha": 141.348, "beta": -149.118, "gamma": -168.497, "delta": 81.206, "epsilon": -137.160, "zeta": -82.019, "epsilon_zeta": -55.141, "bb_type": "BI", "chi": -170.969, "glyco_bond": "anti", "C5prime_xyz": [ -1.447, 8.613, 1.163 ], "P_xyz": [ -0.288, 10.444, -0.300 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.707, "theta": -176.665, "eta_prime": -161.195, "theta_prime": -169.845, "eta_base": -99.120, "theta_base": -143.574, "v0": 2.940, "v1": -25.542, "v2": 37.128, "v3": -36.444, "v4": 21.147, "amplitude": 38.314, "phase_angle": 14.291, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.543, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 294.901, 199.403, 253.214 ], "x_axis": [ 0.804, -0.549, -0.227 ], "y_axis": [ -0.070, -0.467, 0.882 ], "z_axis": [ -0.590, -0.693, -0.413 ], "quaternion": [ 0.481, 0.819, -0.189, -0.250 ] } }, { "index": 1187, "index_chain": 1187, "chain_name": "a", "nt_resnum": 1188, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1188", "linked_nts": [ "///a/1187", "///a/1189" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -64.874, "beta": 156.093, "gamma": 74.141, "delta": 79.559, "epsilon": -105.094, "zeta": -102.259, "epsilon_zeta": -2.835, "bb_type": "--", "chi": -157.382, "glyco_bond": "anti", "C5prime_xyz": [ -1.599, 8.816, 0.332 ], "P_xyz": [ 0.810, 9.364, -0.499 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -175.240, "theta": -139.912, "eta_prime": -164.427, "theta_prime": -136.585, "eta_base": -134.488, "theta_base": -103.283, "v0": -1.320, "v1": -22.174, "v2": 35.848, "v3": -37.605, "v4": 24.596, "amplitude": 38.283, "phase_angle": 20.544, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.322, "filter_rmsd": 0.105, "frame": { "rmsd": 0.007, "origin": [ 293.691, 197.569, 250.203 ], "x_axis": [ 0.561, -0.818, 0.128 ], "y_axis": [ -0.559, -0.260, 0.787 ], "z_axis": [ -0.610, -0.513, -0.603 ], "quaternion": [ 0.418, 0.779, -0.442, -0.155 ] } }, { "index": 1188, "index_chain": 1188, "chain_name": "a", "nt_resnum": 1189, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1189", "linked_nts": [ "///a/1188", "///a/1190" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix", "alpha": -53.782, "beta": 142.989, "gamma": 55.240, "delta": 83.353, "epsilon": -91.165, "zeta": -28.582, "epsilon_zeta": -62.583, "bb_type": "--", "chi": -149.419, "glyco_bond": "anti", "C5prime_xyz": [ -1.557, 8.879, -0.150 ], "P_xyz": [ 0.969, 9.019, -0.783 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.884, "theta": -45.691, "eta_prime": -172.953, "theta_prime": -72.909, "eta_base": -134.247, "theta_base": -82.610, "v0": -2.985, "v1": -19.125, "v2": 32.532, "v3": -35.116, "v4": 24.156, "amplitude": 35.422, "phase_angle": 23.306, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.771, "filter_rmsd": 0.065, "frame": { "rmsd": 0.009, "origin": [ 292.516, 193.932, 248.927 ], "x_axis": [ 0.340, -0.478, 0.810 ], "y_axis": [ -0.880, 0.143, 0.454 ], "z_axis": [ -0.332, -0.867, -0.372 ], "quaternion": [ 0.527, 0.626, -0.542, 0.190 ] } }, { "index": 1189, "index_chain": 1189, "chain_name": "a", "nt_resnum": 1190, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1190", "linked_nts": [ "///a/1189", "///a/1191" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn", "alpha": -163.242, "beta": 141.605, "gamma": -81.335, "delta": 138.765, "epsilon": -147.656, "zeta": 84.092, "epsilon_zeta": 128.251, "bb_type": "--", "chi": 56.637, "glyco_bond": "syn", "C5prime_xyz": [ -5.675, 4.607, 1.143 ], "P_xyz": [ -8.289, 4.569, 0.846 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -85.954, "theta": 9.929, "eta_prime": -50.793, "theta_prime": 38.839, "eta_base": -31.985, "theta_base": 115.252, "v0": -31.460, "v1": 41.356, "v2": -34.854, "v3": 17.692, "v4": 8.391, "amplitude": 40.506, "phase_angle": 149.370, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.036, "frame": { "rmsd": 0.012, "origin": [ 277.957, 186.362, 253.951 ], "x_axis": [ 0.019, -0.852, 0.523 ], "y_axis": [ 0.990, -0.056, -0.128 ], "z_axis": [ 0.138, 0.520, 0.843 ], "quaternion": [ 0.672, -0.241, -0.143, -0.686 ] } }, { "index": 1190, "index_chain": 1190, "chain_name": "a", "nt_resnum": 1191, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1191", "linked_nts": [ "///a/1190", "///a/1192" ], "nt_type": "RNA", "dbn": ".", "summary": "BI,canonical,helix,stem-end", "alpha": -109.365, "beta": -117.691, "gamma": 57.050, "delta": 87.520, "epsilon": -139.654, "zeta": -68.059, "epsilon_zeta": -71.595, "bb_type": "BI", "chi": 178.177, "glyco_bond": "--", "C5prime_xyz": [ -1.083, 8.097, 1.848 ], "P_xyz": [ 0.548, 6.989, 3.556 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -146.075, "theta": -123.051, "eta_prime": -155.189, "theta_prime": -119.933, "eta_base": 147.053, "theta_base": -111.677, "v0": 8.185, "v1": -26.912, "v2": 34.312, "v3": -30.533, "v4": 14.191, "amplitude": 34.454, "phase_angle": 5.209, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.013, "origin": [ 293.570, 189.943, 248.225 ], "x_axis": [ -0.008, -0.113, 0.994 ], "y_axis": [ -0.931, 0.363, 0.034 ], "z_axis": [ -0.365, -0.925, -0.108 ], "quaternion": [ 0.558, 0.429, -0.608, 0.366 ] } }, { "index": 1191, "index_chain": 1191, "chain_name": "a", "nt_resnum": 1192, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1192", "linked_nts": [ "///a/1191", "///a/1193" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -67.460, "beta": -177.082, "gamma": 47.896, "delta": 79.434, "epsilon": -141.053, "zeta": -83.352, "epsilon_zeta": -57.701, "bb_type": "BI", "chi": -152.491, "glyco_bond": "anti", "C5prime_xyz": [ -1.734, 8.851, 0.013 ], "P_xyz": [ 0.709, 9.736, 0.248 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.313, "theta": -152.949, "eta_prime": -179.501, "theta_prime": -148.945, "eta_base": -155.454, "theta_base": -125.827, "v0": -2.067, "v1": -21.526, "v2": 35.530, "v3": -37.716, "v4": 25.088, "amplitude": 38.219, "phase_angle": 21.623, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.833, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 295.055, 186.585, 247.971 ], "x_axis": [ -0.458, -0.007, 0.889 ], "y_axis": [ -0.872, 0.201, -0.447 ], "z_axis": [ -0.175, -0.980, -0.098 ], "quaternion": [ -0.402, -0.332, 0.663, -0.538 ] } }, { "index": 1192, "index_chain": 1192, "chain_name": "a", "nt_resnum": 1193, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1193", "linked_nts": [ "///a/1192", "///a/1194" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end,multiplet", "alpha": -64.545, "beta": 162.173, "gamma": 58.485, "delta": 82.258, "epsilon": -121.194, "zeta": -79.379, "epsilon_zeta": -41.815, "bb_type": "--", "chi": -152.881, "glyco_bond": "anti", "C5prime_xyz": [ -1.768, 8.807, 0.059 ], "P_xyz": [ 0.745, 9.427, -0.260 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.609, "theta": -136.527, "eta_prime": -179.093, "theta_prime": -128.219, "eta_base": -150.383, "theta_base": -116.088, "v0": -2.363, "v1": -20.240, "v2": 33.730, "v3": -36.003, "v4": 24.204, "amplitude": 36.427, "phase_angle": 22.184, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.827, "filter_rmsd": 0.104, "frame": { "rmsd": 0.011, "origin": [ 294.806, 183.300, 248.859 ], "x_axis": [ -0.713, 0.401, 0.575 ], "y_axis": [ -0.615, 0.035, -0.788 ], "z_axis": [ -0.336, -0.916, 0.221 ], "quaternion": [ 0.369, 0.087, -0.618, 0.689 ] } }, { "index": 1193, "index_chain": 1193, "chain_name": "a", "nt_resnum": 1194, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1194", "linked_nts": [ "///a/1193", "///a/1195" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": -44.304, "beta": -139.381, "gamma": 51.671, "delta": 142.453, "epsilon": -135.541, "zeta": 64.603, "epsilon_zeta": 159.857, "bb_type": "--", "chi": -131.741, "glyco_bond": "anti", "C5prime_xyz": [ -2.201, 8.784, -0.722 ], "P_xyz": [ -0.733, 10.200, 0.929 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -137.212, "theta": 75.920, "eta_prime": -124.105, "theta_prime": 27.349, "eta_base": -121.762, "theta_base": -29.374, "v0": -26.833, "v1": 38.807, "v2": -35.245, "v3": 20.735, "v4": 3.607, "amplitude": 38.609, "phase_angle": 155.905, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1[", "suiteness": 0.595, "filter_rmsd": 0.061, "frame": { "rmsd": 0.010, "origin": [ 287.271, 174.032, 250.112 ], "x_axis": [ -0.527, 0.780, 0.338 ], "y_axis": [ 0.339, 0.557, -0.758 ], "z_axis": [ -0.780, -0.285, -0.558 ], "quaternion": [ -0.344, 0.344, 0.813, -0.321 ] } }, { "index": 1194, "index_chain": 1194, "chain_name": "a", "nt_resnum": 1195, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1195", "linked_nts": [ "///a/1194", "///a/1196" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix-end", "alpha": 79.302, "beta": -161.069, "gamma": 39.883, "delta": 125.170, "epsilon": 53.636, "zeta": -77.042, "epsilon_zeta": -229.322, "bb_type": "--", "chi": -121.206, "glyco_bond": "anti", "C5prime_xyz": [ -1.910, 8.507, -1.352 ], "P_xyz": [ 0.109, 9.973, -0.568 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -8.355, "theta": 133.540, "eta_prime": 38.103, "theta_prime": 92.203, "eta_base": 85.180, "theta_base": 109.065, "v0": -20.936, "v1": 27.201, "v2": -23.017, "v3": 11.604, "v4": 5.705, "amplitude": 26.798, "phase_angle": 149.194, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "6p", "suiteness": 0.010, "filter_rmsd": 0.037, "frame": { "rmsd": 0.009, "origin": [ 293.350, 175.154, 232.026 ], "x_axis": [ -0.766, -0.586, -0.265 ], "y_axis": [ -0.197, -0.179, 0.964 ], "z_axis": [ -0.612, 0.790, 0.022 ], "quaternion": [ -0.139, -0.313, 0.626, 0.701 ] } }, { "index": 1195, "index_chain": 1195, "chain_name": "a", "nt_resnum": 1196, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1196", "linked_nts": [ "///a/1195", "///a/1197" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": 127.546, "beta": 146.495, "gamma": 64.433, "delta": 74.096, "epsilon": -142.425, "zeta": -48.982, "epsilon_zeta": -93.443, "bb_type": "BI", "chi": -158.182, "glyco_bond": "anti", "C5prime_xyz": [ -1.913, 8.898, 0.322 ], "P_xyz": [ 0.429, 9.682, -0.479 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -26.345, "theta": -122.189, "eta_prime": -39.276, "theta_prime": -121.097, "eta_base": -52.958, "theta_base": -70.216, "v0": -3.856, "v1": -22.032, "v2": 37.984, "v3": -41.241, "v4": 28.429, "amplitude": 41.505, "phase_angle": 23.773, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.102, "frame": { "rmsd": 0.009, "origin": [ 302.841, 178.409, 247.112 ], "x_axis": [ -0.696, 0.439, 0.568 ], "y_axis": [ -0.674, -0.127, -0.727 ], "z_axis": [ -0.247, -0.889, 0.385 ], "quaternion": [ 0.375, 0.108, -0.544, 0.743 ] } }, { "index": 1196, "index_chain": 1196, "chain_name": "a", "nt_resnum": 1197, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1197", "linked_nts": [ "///a/1196", "///a/1198" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -85.980, "beta": 169.229, "gamma": 76.730, "delta": 79.433, "epsilon": -140.289, "zeta": -64.367, "epsilon_zeta": -75.922, "bb_type": "BI", "chi": -157.462, "glyco_bond": "anti", "C5prime_xyz": [ -1.458, 8.842, 0.357 ], "P_xyz": [ 1.025, 9.360, -0.270 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.837, "theta": -132.490, "eta_prime": -167.440, "theta_prime": -134.713, "eta_base": -92.994, "theta_base": -105.101, "v0": 0.236, "v1": -23.497, "v2": 36.564, "v3": -37.350, "v4": 23.420, "amplitude": 38.494, "phase_angle": 18.218, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.129, "filter_rmsd": 0.067, "frame": { "rmsd": 0.010, "origin": [ 297.293, 178.215, 249.109 ], "x_axis": [ -0.878, 0.185, -0.442 ], "y_axis": [ 0.223, -0.660, -0.718 ], "z_axis": [ -0.424, -0.728, 0.538 ], "quaternion": [ -0.011, -0.247, -0.412, 0.877 ] } }, { "index": 1197, "index_chain": 1197, "chain_name": "a", "nt_resnum": 1198, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1198", "linked_nts": [ "///a/1197", "///a/1199" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -71.488, "beta": -174.541, "gamma": 46.008, "delta": 78.706, "epsilon": -143.483, "zeta": -75.351, "epsilon_zeta": -68.132, "bb_type": "BI", "chi": -163.445, "glyco_bond": "anti", "C5prime_xyz": [ -1.530, 8.723, 0.693 ], "P_xyz": [ 0.877, 9.454, 1.405 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.887, "theta": -148.642, "eta_prime": 174.427, "theta_prime": -142.440, "eta_base": -139.001, "theta_base": -104.602, "v0": 0.691, "v1": -23.987, "v2": 36.826, "v3": -37.455, "v4": 23.172, "amplitude": 38.634, "phase_angle": 17.599, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.822, "filter_rmsd": 0.040, "frame": { "rmsd": 0.010, "origin": [ 293.194, 176.152, 250.216 ], "x_axis": [ -0.204, 0.135, -0.970 ], "y_axis": [ 0.768, -0.592, -0.244 ], "z_axis": [ -0.607, -0.794, 0.017 ], "quaternion": [ -0.235, -0.585, -0.386, 0.673 ] } }, { "index": 1198, "index_chain": 1198, "chain_name": "a", "nt_resnum": 1199, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1199", "linked_nts": [ "///a/1198", "///a/1200" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -63.937, "beta": 164.098, "gamma": 63.776, "delta": 80.639, "epsilon": -163.510, "zeta": -86.906, "epsilon_zeta": -76.603, "bb_type": "BI", "chi": -167.086, "glyco_bond": "anti", "C5prime_xyz": [ -1.345, 8.674, 0.951 ], "P_xyz": [ 1.249, 9.023, 0.900 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.855, "theta": -169.494, "eta_prime": -172.848, "theta_prime": -171.128, "eta_base": -120.923, "theta_base": -170.628, "v0": 1.695, "v1": -24.650, "v2": 36.974, "v3": -36.876, "v4": 22.208, "amplitude": 38.474, "phase_angle": 16.051, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.782, "filter_rmsd": 0.106, "frame": { "rmsd": 0.012, "origin": [ 289.979, 173.879, 248.602 ], "x_axis": [ 0.404, -0.177, -0.898 ], "y_axis": [ 0.720, -0.543, 0.431 ], "z_axis": [ -0.564, -0.821, -0.092 ], "quaternion": [ 0.438, 0.714, 0.190, -0.512 ] } }, { "index": 1199, "index_chain": 1199, "chain_name": "a", "nt_resnum": 1200, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1200", "linked_nts": [ "///a/1199", "///a/1201" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -64.872, "beta": -174.689, "gamma": 52.883, "delta": 76.427, "epsilon": -128.104, "zeta": -68.282, "epsilon_zeta": -59.822, "bb_type": "BI", "chi": -165.033, "glyco_bond": "anti", "C5prime_xyz": [ -1.466, 8.726, 0.768 ], "P_xyz": [ 1.047, 9.310, 1.198 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -179.100, "theta": -131.503, "eta_prime": 176.653, "theta_prime": -126.418, "eta_base": 177.064, "theta_base": -82.228, "v0": 3.008, "v1": -27.289, "v2": 39.925, "v3": -39.224, "v4": 22.759, "amplitude": 41.231, "phase_angle": 14.460, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.700, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 284.236, 172.834, 250.310 ], "x_axis": [ 0.488, -0.183, -0.853 ], "y_axis": [ 0.718, -0.471, 0.512 ], "z_axis": [ -0.496, -0.863, -0.098 ], "quaternion": [ 0.479, 0.717, 0.187, -0.470 ] } }, { "index": 1200, "index_chain": 1200, "chain_name": "a", "nt_resnum": 1201, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1201", "linked_nts": [ "///a/1200", "///a/1202" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -72.116, "beta": 157.980, "gamma": 76.519, "delta": 77.820, "epsilon": -143.534, "zeta": -70.196, "epsilon_zeta": -73.338, "bb_type": "BI", "chi": -171.800, "glyco_bond": "anti", "C5prime_xyz": [ -1.653, 8.747, 1.143 ], "P_xyz": [ 0.809, 9.502, 0.725 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.265, "theta": -142.231, "eta_prime": -172.560, "theta_prime": -142.724, "eta_base": -109.340, "theta_base": -100.112, "v0": -1.916, "v1": -22.329, "v2": 36.671, "v3": -38.799, "v4": 25.668, "amplitude": 39.366, "phase_angle": 21.322, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.209, "filter_rmsd": 0.008, "frame": { "rmsd": 0.008, "origin": [ 284.562, 169.967, 246.919 ], "x_axis": [ 0.943, -0.267, -0.197 ], "y_axis": [ 0.104, -0.327, 0.939 ], "z_axis": [ -0.315, -0.906, -0.281 ], "quaternion": [ 0.578, 0.799, -0.051, -0.160 ] } }, { "index": 1201, "index_chain": 1201, "chain_name": "a", "nt_resnum": 1202, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1202", "linked_nts": [ "///a/1201", "///a/1203" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -71.378, "beta": 165.396, "gamma": 68.285, "delta": 80.662, "epsilon": -123.401, "zeta": -72.761, "epsilon_zeta": -50.639, "bb_type": "--", "chi": -154.211, "glyco_bond": "anti", "C5prime_xyz": [ -1.425, 8.817, 0.173 ], "P_xyz": [ 1.090, 9.227, -0.417 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.770, "theta": -134.103, "eta_prime": -170.810, "theta_prime": -139.336, "eta_base": -112.915, "theta_base": -118.712, "v0": 0.988, "v1": -23.389, "v2": 35.661, "v3": -36.026, "v4": 22.112, "amplitude": 37.311, "phase_angle": 17.098, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.605, "filter_rmsd": 0.068, "frame": { "rmsd": 0.012, "origin": [ 285.628, 167.192, 245.107 ], "x_axis": [ 0.724, -0.550, 0.417 ], "y_axis": [ -0.626, -0.268, 0.732 ], "z_axis": [ -0.291, -0.791, -0.538 ], "quaternion": [ 0.479, 0.795, -0.370, 0.040 ] } }, { "index": 1202, "index_chain": 1202, "chain_name": "a", "nt_resnum": 1203, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1203", "linked_nts": [ "///a/1202", "///a/1204" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end,multiplet", "alpha": -104.834, "beta": 138.202, "gamma": 107.385, "delta": 79.627, "epsilon": -127.281, "zeta": -81.217, "epsilon_zeta": -46.065, "bb_type": "--", "chi": -157.577, "glyco_bond": "anti", "C5prime_xyz": [ -1.397, 8.787, 0.374 ], "P_xyz": [ 0.240, 9.485, -1.554 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.881, "theta": -149.172, "eta_prime": 174.681, "theta_prime": -151.972, "eta_base": -148.070, "theta_base": -133.483, "v0": 2.628, "v1": -25.362, "v2": 37.191, "v3": -36.649, "v4": 21.411, "amplitude": 38.453, "phase_angle": 14.720, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.066, "frame": { "rmsd": 0.009, "origin": [ 286.182, 164.292, 243.617 ], "x_axis": [ 0.433, -0.453, 0.779 ], "y_axis": [ -0.900, -0.259, 0.349 ], "z_axis": [ 0.044, -0.853, -0.520 ], "quaternion": [ 0.404, 0.744, -0.455, 0.277 ] } }, { "index": 1203, "index_chain": 1203, "chain_name": "a", "nt_resnum": 1204, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1204", "linked_nts": [ "///a/1203", "///a/1205" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -80.535, "beta": 167.281, "gamma": 74.161, "delta": 78.735, "epsilon": -123.242, "zeta": -69.261, "epsilon_zeta": -53.980, "bb_type": "--", "chi": -145.713, "glyco_bond": "anti", "C5prime_xyz": [ -1.791, 8.865, -0.358 ], "P_xyz": [ 0.554, 9.467, -1.343 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.331, "theta": -123.879, "eta_prime": -179.855, "theta_prime": -121.324, "eta_base": -151.018, "theta_base": -87.607, "v0": -1.985, "v1": -21.616, "v2": 35.618, "v3": -37.739, "v4": 25.050, "amplitude": 38.279, "phase_angle": 21.490, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.265, "filter_rmsd": 0.063, "frame": { "rmsd": 0.007, "origin": [ 287.859, 160.864, 242.720 ], "x_axis": [ -0.068, -0.266, 0.962 ], "y_axis": [ -0.961, -0.240, -0.134 ], "z_axis": [ 0.267, -0.934, -0.239 ], "quaternion": [ 0.336, 0.594, -0.516, 0.517 ] } }, { "index": 1204, "index_chain": 1204, "chain_name": "a", "nt_resnum": 1205, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1205", "linked_nts": [ "///a/1204", "///a/1206" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,helix,multiplet", "alpha": -63.572, "beta": 167.530, "gamma": 63.336, "delta": 81.883, "epsilon": -108.911, "zeta": 135.476, "epsilon_zeta": 115.613, "bb_type": "BII", "chi": -154.276, "glyco_bond": "anti", "C5prime_xyz": [ -1.836, 8.854, 0.113 ], "P_xyz": [ 0.635, 9.649, -0.159 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.477, "theta": 93.763, "eta_prime": -163.587, "theta_prime": 100.863, "eta_base": -118.892, "theta_base": -176.559, "v0": -5.090, "v1": -17.563, "v2": 32.065, "v3": -35.938, "v4": 25.850, "amplitude": 35.845, "phase_angle": 26.552, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.576, "filter_rmsd": 0.102, "frame": { "rmsd": 0.005, "origin": [ 286.528, 155.903, 246.257 ], "x_axis": [ -0.812, 0.231, 0.536 ], "y_axis": [ -0.556, -0.026, -0.831 ], "z_axis": [ -0.178, -0.973, 0.150 ], "quaternion": [ 0.279, 0.127, -0.640, 0.705 ] } }, { "index": 1205, "index_chain": 1205, "chain_name": "a", "nt_resnum": 1206, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1206", "linked_nts": [ "///a/1205", "///a/1207" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -42.145, "beta": 172.152, "gamma": 77.392, "delta": 148.283, "epsilon": -99.880, "zeta": 67.665, "epsilon_zeta": 192.456, "bb_type": "--", "chi": -158.513, "glyco_bond": "anti", "C5prime_xyz": [ -1.760, 8.600, 0.879 ], "P_xyz": [ 0.575, 8.660, 2.064 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -80.989, "theta": 71.927, "eta_prime": -70.700, "theta_prime": 55.757, "eta_base": -153.024, "theta_base": 42.305, "v0": -20.548, "v1": 35.439, "v2": -35.936, "v3": 25.045, "v4": -3.004, "amplitude": 37.065, "phase_angle": 165.823, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "3b", "suiteness": 0.010, "filter_rmsd": 0.103, "frame": { "rmsd": 0.005, "origin": [ 284.836, 143.676, 233.772 ], "x_axis": [ 0.383, -0.350, 0.855 ], "y_axis": [ 0.041, 0.931, 0.363 ], "z_axis": [ -0.923, -0.104, 0.371 ], "quaternion": [ 0.819, 0.143, -0.542, -0.119 ] } }, { "index": 1206, "index_chain": 1206, "chain_name": "a", "nt_resnum": 1207, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1207", "linked_nts": [ "///a/1206", "///a/1208" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,multiplet", "alpha": -109.371, "beta": -174.017, "gamma": 46.182, "delta": 142.839, "epsilon": -90.775, "zeta": -173.667, "epsilon_zeta": 82.892, "bb_type": "BII", "chi": -84.803, "glyco_bond": "anti", "C5prime_xyz": [ -3.188, 7.413, -2.633 ], "P_xyz": [ -1.252, 8.989, -3.450 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.890, "theta": -145.874, "eta_prime": -169.440, "theta_prime": 165.791, "eta_base": -178.602, "theta_base": 128.767, "v0": -26.390, "v1": 38.599, "v2": -35.298, "v3": 21.099, "v4": 3.029, "amplitude": 38.450, "phase_angle": 156.641, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "0b", "suiteness": 0.029, "filter_rmsd": 0.037, "frame": { "rmsd": 0.015, "origin": [ 289.336, 154.289, 237.878 ], "x_axis": [ 0.563, -0.774, -0.291 ], "y_axis": [ -0.469, -0.009, -0.883 ], "z_axis": [ 0.681, 0.633, -0.368 ], "quaternion": [ 0.544, -0.696, 0.446, -0.140 ] } }, { "index": 1207, "index_chain": 1207, "chain_name": "a", "nt_resnum": 1208, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1208", "linked_nts": [ "///a/1207", "///a/1209" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack,non-canonical,multiplet", "alpha": 69.031, "beta": -152.273, "gamma": 78.430, "delta": 148.198, "epsilon": -97.988, "zeta": -82.313, "epsilon_zeta": -15.675, "bb_type": "--", "chi": -162.833, "glyco_bond": "anti", "C5prime_xyz": [ -1.609, 8.576, 1.134 ], "P_xyz": [ 0.167, 8.209, 3.034 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 32.953, "theta": -56.094, "eta_prime": 59.417, "theta_prime": -73.956, "eta_base": 65.606, "theta_base": -52.151, "v0": -19.439, "v1": 34.575, "v2": -35.611, "v3": 25.323, "v4": -3.851, "amplitude": 36.515, "phase_angle": 167.230, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "4p", "suiteness": 0.173, "filter_rmsd": 0.065, "frame": { "rmsd": 0.007, "origin": [ 280.974, 163.147, 240.093 ], "x_axis": [ -0.977, -0.134, -0.166 ], "y_axis": [ 0.180, -0.100, -0.979 ], "z_axis": [ 0.115, -0.986, 0.121 ], "quaternion": [ -0.106, -0.017, -0.663, 0.741 ] } }, { "index": 1208, "index_chain": 1208, "chain_name": "a", "nt_resnum": 1209, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1209", "linked_nts": [ "///a/1208", "///a/1210" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -52.990, "beta": 178.020, "gamma": 54.095, "delta": 81.166, "epsilon": -147.538, "zeta": -66.694, "epsilon_zeta": -80.845, "bb_type": "BI", "chi": -168.376, "glyco_bond": "anti", "C5prime_xyz": [ -1.209, 8.620, 1.026 ], "P_xyz": [ 1.359, 8.793, 1.508 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.741, "theta": -110.373, "eta_prime": -146.951, "theta_prime": -121.361, "eta_base": -117.421, "theta_base": -88.887, "v0": 4.268, "v1": -26.252, "v2": 37.247, "v3": -35.695, "v4": 19.848, "amplitude": 38.124, "phase_angle": 12.314, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.634, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 290.279, 153.811, 231.334 ], "x_axis": [ -0.525, 0.234, -0.819 ], "y_axis": [ -0.266, 0.868, 0.419 ], "z_axis": [ 0.809, 0.438, -0.393 ], "quaternion": [ 0.487, -0.010, 0.835, 0.257 ] } }, { "index": 1209, "index_chain": 1209, "chain_name": "a", "nt_resnum": 1210, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1210", "linked_nts": [ "///a/1209", "///a/1211" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 158.345, "beta": -174.724, "gamma": 171.662, "delta": 84.240, "epsilon": -132.045, "zeta": -74.547, "epsilon_zeta": -57.498, "bb_type": "BI", "chi": 177.616, "glyco_bond": "anti", "C5prime_xyz": [ -1.046, 8.179, 1.862 ], "P_xyz": [ 0.778, 9.931, 1.256 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.215, "theta": -159.102, "eta_prime": 173.461, "theta_prime": -151.726, "eta_base": -127.895, "theta_base": -117.342, "v0": 7.674, "v1": -27.990, "v2": 36.696, "v3": -33.266, "v4": 16.133, "amplitude": 36.966, "phase_angle": 6.934, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.774, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 291.505, 154.793, 227.183 ], "x_axis": [ -0.776, 0.608, -0.167 ], "y_axis": [ 0.209, 0.498, 0.842 ], "z_axis": [ 0.595, 0.619, -0.514 ], "quaternion": [ 0.228, 0.245, 0.835, 0.437 ] } }, { "index": 1210, "index_chain": 1210, "chain_name": "a", "nt_resnum": 1211, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1211", "linked_nts": [ "///a/1210", "///a/1212" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -60.243, "beta": 177.417, "gamma": 49.609, "delta": 83.686, "epsilon": -142.747, "zeta": -80.353, "epsilon_zeta": -62.394, "bb_type": "BI", "chi": -158.063, "glyco_bond": "anti", "C5prime_xyz": [ -1.294, 8.746, 0.471 ], "P_xyz": [ 1.261, 9.070, 0.925 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.828, "theta": -145.820, "eta_prime": -174.170, "theta_prime": -144.930, "eta_base": -131.046, "theta_base": -135.744, "v0": 1.124, "v1": -22.140, "v2": 33.599, "v3": -33.850, "v4": 20.628, "amplitude": 35.097, "phase_angle": 16.797, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.817, "filter_rmsd": 0.065, "frame": { "rmsd": 0.008, "origin": [ 291.957, 156.710, 224.074 ], "x_axis": [ -0.499, 0.751, 0.433 ], "y_axis": [ 0.703, 0.058, 0.709 ], "z_axis": [ 0.507, 0.658, -0.557 ], "quaternion": [ 0.026, 0.500, 0.727, 0.470 ] } }, { "index": 1211, "index_chain": 1211, "chain_name": "a", "nt_resnum": 1212, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1212", "linked_nts": [ "///a/1211", "///a/1213" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -62.625, "beta": 176.500, "gamma": 43.885, "delta": 81.309, "epsilon": 176.830, "zeta": -91.626, "epsilon_zeta": -91.545, "bb_type": "BI", "chi": -153.281, "glyco_bond": "anti", "C5prime_xyz": [ -1.468, 8.865, 0.099 ], "P_xyz": [ 1.007, 9.560, 0.517 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.716, "theta": -155.072, "eta_prime": 173.994, "theta_prime": -162.183, "eta_base": -164.098, "theta_base": -149.542, "v0": -2.521, "v1": -19.509, "v2": 32.749, "v3": -35.098, "v4": 23.798, "amplitude": 35.467, "phase_angle": 22.577, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.794, "filter_rmsd": 0.063, "frame": { "rmsd": 0.008, "origin": [ 292.560, 158.625, 221.071 ], "x_axis": [ -0.329, 0.406, 0.853 ], "y_axis": [ 0.889, -0.170, 0.424 ], "z_axis": [ 0.317, 0.898, -0.305 ], "quaternion": [ -0.221, 0.535, 0.605, 0.547 ] } }, { "index": 1212, "index_chain": 1212, "chain_name": "a", "nt_resnum": 1213, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1213", "linked_nts": [ "///a/1212", "///a/1214" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 157.167, "beta": -144.493, "gamma": 170.230, "delta": 85.415, "epsilon": -102.605, "zeta": -114.841, "epsilon_zeta": 12.236, "bb_type": "--", "chi": 172.018, "glyco_bond": "anti", "C5prime_xyz": [ -1.492, 8.173, 2.091 ], "P_xyz": [ 0.703, 9.431, 1.439 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -179.999, "theta": -127.492, "eta_prime": -176.398, "theta_prime": -140.194, "eta_base": -153.762, "theta_base": -108.834, "v0": 2.371, "v1": -22.761, "v2": 33.288, "v3": -32.870, "v4": 19.264, "amplitude": 34.425, "phase_angle": 14.766, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.446, "filter_rmsd": 0.047, "frame": { "rmsd": 0.017, "origin": [ 292.350, 161.623, 218.229 ], "x_axis": [ -0.047, 0.280, 0.959 ], "y_axis": [ 0.918, -0.366, 0.152 ], "z_axis": [ 0.394, 0.887, -0.240 ], "quaternion": [ -0.295, 0.624, 0.480, 0.542 ] } }, { "index": 1213, "index_chain": 1213, "chain_name": "a", "nt_resnum": 1214, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1214", "linked_nts": [ "///a/1213", "///a/1215" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": 118.410, "beta": -130.424, "gamma": 177.532, "delta": 81.609, "epsilon": -132.495, "zeta": -72.153, "epsilon_zeta": -60.342, "bb_type": "BI", "chi": 173.924, "glyco_bond": "anti", "C5prime_xyz": [ -1.237, 8.206, 2.038 ], "P_xyz": [ 0.660, 9.539, 0.844 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 132.742, "theta": -148.827, "eta_prime": 159.472, "theta_prime": -149.214, "eta_base": -144.393, "theta_base": -110.623, "v0": 4.965, "v1": -26.874, "v2": 37.376, "v3": -35.457, "v4": 19.179, "amplitude": 38.103, "phase_angle": 11.210, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 292.404, 164.976, 218.427 ], "x_axis": [ 0.450, -0.191, 0.872 ], "y_axis": [ 0.785, -0.382, -0.489 ], "z_axis": [ 0.426, 0.904, -0.022 ], "quaternion": [ 0.511, -0.681, -0.218, -0.477 ] } }, { "index": 1214, "index_chain": 1214, "chain_name": "a", "nt_resnum": 1215, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1215", "linked_nts": [ "///a/1214", "///a/1216" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix-end,stem-end,multiplet", "alpha": -68.751, "beta": 171.347, "gamma": 62.355, "delta": 83.973, "epsilon": -146.111, "zeta": -64.949, "epsilon_zeta": -81.162, "bb_type": "BI", "chi": -179.478, "glyco_bond": "anti", "C5prime_xyz": [ -1.178, 8.370, 1.658 ], "P_xyz": [ 1.378, 8.424, 2.170 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.434, "theta": -133.098, "eta_prime": -172.244, "theta_prime": -130.727, "eta_base": -113.796, "theta_base": -99.814, "v0": 3.415, "v1": -24.387, "v2": 34.873, "v3": -33.859, "v4": 19.278, "amplitude": 35.831, "phase_angle": 13.282, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.763, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 294.033, 168.389, 220.488 ], "x_axis": [ 0.851, -0.467, 0.242 ], "y_axis": [ 0.148, -0.229, -0.962 ], "z_axis": [ 0.505, 0.854, -0.125 ], "quaternion": [ 0.612, -0.742, 0.107, -0.251 ] } }, { "index": 1215, "index_chain": 1215, "chain_name": "a", "nt_resnum": 1216, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1216", "linked_nts": [ "///a/1215", "///a/1217" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -72.262, "beta": 170.194, "gamma": 67.052, "delta": 84.246, "epsilon": -123.177, "zeta": -101.408, "epsilon_zeta": -21.768, "bb_type": "--", "chi": -166.686, "glyco_bond": "anti", "C5prime_xyz": [ -1.493, 8.622, 0.933 ], "P_xyz": [ 1.095, 8.979, 0.862 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.377, "theta": -147.960, "eta_prime": -164.047, "theta_prime": -145.559, "eta_base": -115.233, "theta_base": -133.983, "v0": 1.722, "v1": -23.283, "v2": 34.819, "v3": -34.729, "v4": 20.839, "amplitude": 36.207, "phase_angle": 15.919, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.654, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 296.882, 171.221, 221.570 ], "x_axis": [ 0.847, -0.297, -0.441 ], "y_axis": [ -0.433, 0.096, -0.896 ], "z_axis": [ 0.308, 0.950, -0.047 ], "quaternion": [ 0.688, -0.670, 0.272, 0.050 ] } }, { "index": 1216, "index_chain": 1216, "chain_name": "a", "nt_resnum": 1217, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1217", "linked_nts": [ "///a/1216", "///a/1218" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -52.303, "beta": 145.186, "gamma": 59.924, "delta": 80.330, "epsilon": -152.682, "zeta": 44.746, "epsilon_zeta": 162.572, "bb_type": "--", "chi": -123.467, "glyco_bond": "anti", "C5prime_xyz": [ -2.053, 8.552, -1.592 ], "P_xyz": [ 0.146, 8.528, -2.990 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.220, "theta": -1.589, "eta_prime": -178.375, "theta_prime": -47.271, "eta_base": -156.092, "theta_base": -67.340, "v0": -3.974, "v1": -18.619, "v2": 32.813, "v3": -36.012, "v4": 25.331, "amplitude": 36.151, "phase_angle": 24.816, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.891, "filter_rmsd": 0.071, "frame": { "rmsd": 0.014, "origin": [ 297.738, 172.738, 222.140 ], "x_axis": [ 0.714, -0.095, -0.694 ], "y_axis": [ -0.416, 0.739, -0.530 ], "z_axis": [ 0.563, 0.667, 0.488 ], "quaternion": [ 0.857, -0.349, 0.367, 0.094 ] } }, { "index": 1217, "index_chain": 1217, "chain_name": "a", "nt_resnum": 1218, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1218", "linked_nts": [ "///a/1217", "///a/1219" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": 82.628, "beta": 147.732, "gamma": 152.580, "delta": 88.911, "epsilon": -103.453, "zeta": -45.136, "epsilon_zeta": -58.316, "bb_type": "--", "chi": -144.894, "glyco_bond": "anti", "C5prime_xyz": [ -2.228, 8.865, -0.525 ], "P_xyz": [ -1.689, 10.060, -2.813 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 76.962, "theta": -111.262, "eta_prime": 114.424, "theta_prime": -97.197, "eta_base": 139.929, "theta_base": -59.749, "v0": -13.409, "v1": -6.603, "v2": 22.523, "v3": -30.828, "v4": 27.958, "amplitude": 31.008, "phase_angle": 43.417, "puckering": "C4'-exo", "sugar_class": "--", "bin": "33t", "cluster": "5j", "suiteness": 0.010, "filter_rmsd": 0.097, "frame": { "rmsd": 0.010, "origin": [ 301.363, 177.282, 213.918 ], "x_axis": [ -0.154, -0.963, 0.222 ], "y_axis": [ -0.888, 0.233, 0.397 ], "z_axis": [ -0.434, -0.136, -0.890 ], "quaternion": [ -0.217, -0.613, 0.755, 0.087 ] } }, { "index": 1218, "index_chain": 1218, "chain_name": "a", "nt_resnum": 1219, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1219", "linked_nts": [ "///a/1218", "///a/1220" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -83.694, "beta": -122.936, "gamma": 87.725, "delta": 145.512, "epsilon": -139.117, "zeta": -59.664, "epsilon_zeta": -79.453, "bb_type": "BI", "chi": -171.925, "glyco_bond": "anti", "C5prime_xyz": [ -1.878, 8.309, 1.557 ], "P_xyz": [ -0.290, 7.254, 3.365 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -158.666, "theta": -52.834, "eta_prime": -113.845, "theta_prime": -82.392, "eta_base": -111.373, "theta_base": -85.541, "v0": -19.191, "v1": 32.548, "v2": -32.649, "v3": 22.313, "v4": -2.159, "amplitude": 33.830, "phase_angle": 164.818, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.038, "frame": { "rmsd": 0.013, "origin": [ 285.194, 181.394, 216.769 ], "x_axis": [ 0.337, -0.183, 0.924 ], "y_axis": [ 0.889, -0.262, -0.376 ], "z_axis": [ 0.311, 0.948, 0.074 ], "quaternion": [ 0.536, -0.617, -0.286, -0.500 ] } }, { "index": 1219, "index_chain": 1219, "chain_name": "a", "nt_resnum": 1220, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1220", "linked_nts": [ "///a/1219", "///a/1221" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,canonical,helix,stem-end", "alpha": -108.145, "beta": -177.663, "gamma": 49.519, "delta": 142.805, "epsilon": -82.106, "zeta": 167.033, "epsilon_zeta": 110.861, "bb_type": "BII", "chi": -93.355, "glyco_bond": "anti", "C5prime_xyz": [ -3.024, 7.862, -2.456 ], "P_xyz": [ -1.155, 9.554, -3.113 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 149.699, "theta": -170.634, "eta_prime": -165.163, "theta_prime": 164.092, "eta_base": -146.786, "theta_base": 139.898, "v0": -28.819, "v1": 41.603, "v2": -37.756, "v3": 22.188, "v4": 3.902, "amplitude": 41.382, "phase_angle": 155.836, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "2[", "suiteness": 0.010, "filter_rmsd": 0.058, "frame": { "rmsd": 0.012, "origin": [ 284.839, 185.335, 216.904 ], "x_axis": [ 0.669, -0.383, 0.636 ], "y_axis": [ 0.669, -0.062, -0.741 ], "z_axis": [ 0.324, 0.921, 0.215 ], "quaternion": [ 0.675, -0.616, -0.116, -0.390 ] } }, { "index": 1220, "index_chain": 1220, "chain_name": "a", "nt_resnum": 1221, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1221", "linked_nts": [ "///a/1220", "///a/1222" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,non-stack", "alpha": 73.310, "beta": 145.551, "gamma": 169.295, "delta": 83.432, "epsilon": -166.641, "zeta": 27.374, "epsilon_zeta": 165.985, "bb_type": "--", "chi": -52.933, "glyco_bond": "--", "C5prime_xyz": [ -3.587, 5.422, -3.404 ], "P_xyz": [ -5.386, 4.113, -4.788 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 106.217, "theta": -112.707, "eta_prime": 100.032, "theta_prime": -105.392, "eta_base": 109.503, "theta_base": -91.400, "v0": 1.910, "v1": -22.937, "v2": 33.973, "v3": -33.883, "v4": 20.228, "amplitude": 35.279, "phase_angle": 15.637, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.035, "frame": { "rmsd": 0.008, "origin": [ 279.092, 187.858, 212.238 ], "x_axis": [ -0.154, 0.447, 0.881 ], "y_axis": [ 0.374, 0.852, -0.367 ], "z_axis": [ -0.914, 0.273, -0.299 ], "quaternion": [ 0.591, -0.271, -0.759, 0.031 ] } }, { "index": 1221, "index_chain": 1221, "chain_name": "a", "nt_resnum": 1222, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1222", "linked_nts": [ "///a/1221", "///a/1223" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-stack,canonical,helix,stem-end", "alpha": -162.948, "beta": 137.936, "gamma": 142.442, "delta": 83.975, "epsilon": -107.814, "zeta": -96.128, "epsilon_zeta": -11.686, "bb_type": "--", "chi": -152.571, "glyco_bond": "anti", "C5prime_xyz": [ -1.582, 8.863, 0.060 ], "P_xyz": [ -0.766, 10.115, -2.078 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.096, "theta": -169.361, "eta_prime": -151.957, "theta_prime": -161.829, "eta_base": -122.931, "theta_base": -132.132, "v0": -2.566, "v1": -19.091, "v2": 32.158, "v3": -34.574, "v4": 23.514, "amplitude": 34.878, "phase_angle": 22.780, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.062, "frame": { "rmsd": 0.008, "origin": [ 283.804, 189.202, 216.839 ], "x_axis": [ 0.919, -0.393, -0.039 ], "y_axis": [ 0.240, 0.635, -0.734 ], "z_axis": [ 0.313, 0.665, 0.678 ], "quaternion": [ 0.899, -0.389, 0.098, -0.176 ] } }, { "index": 1222, "index_chain": 1222, "chain_name": "a", "nt_resnum": 1223, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1223", "linked_nts": [ "///a/1222", "///a/1224" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -63.832, "beta": 153.656, "gamma": 53.271, "delta": 79.191, "epsilon": -144.458, "zeta": -85.220, "epsilon_zeta": -59.237, "bb_type": "BI", "chi": -171.398, "glyco_bond": "anti", "C5prime_xyz": [ -1.741, 8.700, 1.111 ], "P_xyz": [ 0.788, 9.255, 1.339 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.374, "theta": -153.190, "eta_prime": 170.473, "theta_prime": -152.972, "eta_base": -151.868, "theta_base": -136.049, "v0": -3.364, "v1": -20.230, "v2": 34.757, "v3": -37.684, "v4": 25.905, "amplitude": 37.927, "phase_angle": 23.595, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.152, "filter_rmsd": 0.040, "frame": { "rmsd": 0.008, "origin": [ 287.642, 192.647, 219.768 ], "x_axis": [ 0.443, -0.497, -0.746 ], "y_axis": [ -0.495, 0.558, -0.666 ], "z_axis": [ 0.748, 0.664, 0.001 ], "quaternion": [ 0.708, -0.470, 0.528, -0.001 ] } }, { "index": 1223, "index_chain": 1223, "chain_name": "a", "nt_resnum": 1224, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1224", "linked_nts": [ "///a/1223", "///a/1225" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem", "alpha": -66.541, "beta": 164.686, "gamma": 58.954, "delta": 79.086, "epsilon": -151.807, "zeta": -77.528, "epsilon_zeta": -74.279, "bb_type": "BI", "chi": -153.172, "glyco_bond": "anti", "C5prime_xyz": [ -1.586, 8.832, 0.098 ], "P_xyz": [ 0.957, 9.307, -0.368 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.253, "theta": -151.238, "eta_prime": 175.817, "theta_prime": -150.967, "eta_base": -154.284, "theta_base": -127.108, "v0": 1.149, "v1": -24.407, "v2": 37.113, "v3": -37.380, "v4": 22.828, "amplitude": 38.783, "phase_angle": 16.877, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.809, "filter_rmsd": 0.069, "frame": { "rmsd": 0.011, "origin": [ 290.456, 193.431, 221.000 ], "x_axis": [ 0.245, -0.126, -0.961 ], "y_axis": [ -0.454, 0.861, -0.228 ], "z_axis": [ 0.857, 0.492, 0.154 ], "quaternion": [ 0.752, -0.240, 0.605, 0.109 ] } }, { "index": 1224, "index_chain": 1224, "chain_name": "a", "nt_resnum": 1225, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1225", "linked_nts": [ "///a/1224", "///a/1226" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -63.143, "beta": 171.481, "gamma": 64.434, "delta": 79.110, "epsilon": -116.168, "zeta": -79.059, "epsilon_zeta": -37.109, "bb_type": "--", "chi": -167.823, "glyco_bond": "anti", "C5prime_xyz": [ -1.209, 8.635, 0.962 ], "P_xyz": [ 1.386, 8.982, 0.850 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -175.523, "theta": -138.357, "eta_prime": -168.352, "theta_prime": -140.196, "eta_base": -136.720, "theta_base": -125.911, "v0": 4.438, "v1": -27.405, "v2": 38.761, "v3": -37.208, "v4": 20.631, "amplitude": 39.671, "phase_angle": 12.293, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.767, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 295.580, 195.235, 220.657 ], "x_axis": [ -0.185, 0.271, -0.945 ], "y_axis": [ -0.653, 0.684, 0.324 ], "z_axis": [ 0.734, 0.677, 0.050 ], "quaternion": [ 0.622, -0.142, 0.674, 0.371 ] } }, { "index": 1225, "index_chain": 1225, "chain_name": "a", "nt_resnum": 1226, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1226", "linked_nts": [ "///a/1225", "///a/1227" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -96.215, "beta": 128.211, "gamma": 108.053, "delta": 81.190, "epsilon": -129.555, "zeta": -62.222, "epsilon_zeta": -67.333, "bb_type": "BI", "chi": -157.186, "glyco_bond": "anti", "C5prime_xyz": [ -1.474, 8.690, 0.363 ], "P_xyz": [ -0.050, 9.288, -1.750 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.967, "theta": -129.968, "eta_prime": 178.311, "theta_prime": -137.502, "eta_base": -151.536, "theta_base": -104.724, "v0": 4.426, "v1": -26.666, "v2": 37.539, "v3": -35.992, "v4": 19.895, "amplitude": 38.394, "phase_angle": 12.113, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.107, "frame": { "rmsd": 0.013, "origin": [ 297.775, 195.866, 219.759 ], "x_axis": [ -0.362, 0.480, -0.799 ], "y_axis": [ -0.180, 0.805, 0.565 ], "z_axis": [ 0.915, 0.348, -0.205 ], "quaternion": [ 0.556, 0.097, 0.770, 0.296 ] } }, { "index": 1226, "index_chain": 1226, "chain_name": "a", "nt_resnum": 1227, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1227", "linked_nts": [ "///a/1226", "///a/1228" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -91.443, "beta": -179.722, "gamma": 71.923, "delta": 79.137, "epsilon": -155.387, "zeta": -79.470, "epsilon_zeta": -75.917, "bb_type": "BI", "chi": -164.851, "glyco_bond": "anti", "C5prime_xyz": [ -1.659, 8.830, 0.746 ], "P_xyz": [ 0.824, 9.613, 0.779 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.302, "theta": -160.498, "eta_prime": 177.834, "theta_prime": -159.185, "eta_base": -127.483, "theta_base": -142.230, "v0": -2.469, "v1": -21.261, "v2": 35.414, "v3": -37.813, "v4": 25.428, "amplitude": 38.246, "phase_angle": 22.186, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.222, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 299.340, 199.301, 216.128 ], "x_axis": [ -0.814, 0.577, 0.064 ], "y_axis": [ 0.219, 0.203, 0.954 ], "z_axis": [ 0.538, 0.791, -0.292 ], "quaternion": [ 0.156, 0.262, 0.760, 0.574 ] } }, { "index": 1227, "index_chain": 1227, "chain_name": "a", "nt_resnum": 1228, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1228", "linked_nts": [ "///a/1227", "///a/1229" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -78.024, "beta": 159.109, "gamma": 83.790, "delta": 81.701, "epsilon": -120.034, "zeta": -62.717, "epsilon_zeta": -57.317, "bb_type": "--", "chi": -142.340, "glyco_bond": "anti", "C5prime_xyz": [ -1.707, 8.753, -0.596 ], "P_xyz": [ 0.467, 9.000, -2.031 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.633, "theta": -129.508, "eta_prime": -168.535, "theta_prime": -140.944, "eta_base": -145.214, "theta_base": -130.775, "v0": 0.632, "v1": -22.941, "v2": 35.278, "v3": -35.857, "v4": 22.215, "amplitude": 37.016, "phase_angle": 17.627, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.036, "filter_rmsd": 0.066, "frame": { "rmsd": 0.014, "origin": [ 300.425, 200.799, 213.969 ], "x_axis": [ -0.441, 0.873, 0.210 ], "y_axis": [ 0.746, 0.226, 0.626 ], "z_axis": [ 0.499, 0.433, -0.751 ], "quaternion": [ 0.093, 0.521, 0.777, 0.341 ] } }, { "index": 1228, "index_chain": 1228, "chain_name": "a", "nt_resnum": 1229, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1229", "linked_nts": [ "///a/1228", "///a/1230" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end,multiplet", "alpha": -112.131, "beta": 119.191, "gamma": 131.211, "delta": 81.480, "epsilon": -115.708, "zeta": -29.010, "epsilon_zeta": -86.698, "bb_type": "--", "chi": -157.347, "glyco_bond": "anti", "C5prime_xyz": [ -1.485, 8.744, 0.370 ], "P_xyz": [ -0.762, 9.813, -1.907 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.495, "theta": -125.625, "eta_prime": -179.886, "theta_prime": -141.409, "eta_base": -155.067, "theta_base": -115.720, "v0": 1.292, "v1": -23.411, "v2": 35.374, "v3": -35.580, "v4": 21.621, "amplitude": 36.917, "phase_angle": 16.620, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.107, "frame": { "rmsd": 0.010, "origin": [ 301.221, 203.667, 211.304 ], "x_axis": [ -0.318, 0.765, 0.560 ], "y_axis": [ 0.897, 0.053, 0.438 ], "z_axis": [ 0.306, 0.642, -0.703 ], "quaternion": [ -0.088, 0.577, 0.720, 0.375 ] } }, { "index": 1229, "index_chain": 1229, "chain_name": "a", "nt_resnum": 1230, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1230", "linked_nts": [ "///a/1229", "///a/1231" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -137.781, "beta": 103.575, "gamma": 149.827, "delta": 80.059, "epsilon": -112.521, "zeta": -102.735, "epsilon_zeta": -9.786, "bb_type": "--", "chi": -171.955, "glyco_bond": "anti", "C5prime_xyz": [ -1.235, 8.459, 1.216 ], "P_xyz": [ -1.114, 10.330, -0.621 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 150.321, "theta": 169.121, "eta_prime": 167.689, "theta_prime": -175.800, "eta_base": -147.659, "theta_base": -127.159, "v0": 6.663, "v1": -29.245, "v2": 39.390, "v3": -36.558, "v4": 18.870, "amplitude": 39.897, "phase_angle": 9.147, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.011, "origin": [ 300.631, 207.988, 210.982 ], "x_axis": [ 0.037, 0.338, 0.940 ], "y_axis": [ 0.975, -0.217, 0.039 ], "z_axis": [ 0.217, 0.916, -0.338 ], "quaternion": [ -0.347, 0.631, 0.520, 0.459 ] } }, { "index": 1230, "index_chain": 1230, "chain_name": "a", "nt_resnum": 1231, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1231", "linked_nts": [ "///a/1230", "///a/1232" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end", "alpha": -52.127, "beta": 133.135, "gamma": 69.108, "delta": 83.371, "epsilon": -154.746, "zeta": 51.637, "epsilon_zeta": 153.617, "bb_type": "--", "chi": -147.948, "glyco_bond": "anti", "C5prime_xyz": [ -1.464, 8.792, -0.210 ], "P_xyz": [ 0.798, 8.569, -1.512 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.262, "theta": 18.508, "eta_prime": -173.872, "theta_prime": 8.686, "eta_base": -116.673, "theta_base": 2.841, "v0": 1.291, "v1": -23.442, "v2": 35.369, "v3": -35.514, "v4": 21.623, "amplitude": 36.903, "phase_angle": 16.577, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.788, "filter_rmsd": 0.067, "frame": { "rmsd": 0.012, "origin": [ 300.834, 210.614, 211.736 ], "x_axis": [ 0.575, 0.267, 0.774 ], "y_axis": [ 0.791, 0.061, -0.609 ], "z_axis": [ -0.210, 0.962, -0.177 ], "quaternion": [ 0.604, -0.650, -0.407, -0.217 ] } }, { "index": 1231, "index_chain": 1231, "chain_name": "a", "nt_resnum": 1232, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1232", "linked_nts": [ "///a/1231", "///a/1233" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": 111.500, "beta": -132.454, "gamma": -174.706, "delta": 81.435, "epsilon": -138.229, "zeta": -62.835, "epsilon_zeta": -75.393, "bb_type": "BI", "chi": -176.830, "glyco_bond": "anti", "C5prime_xyz": [ -1.600, 8.496, 1.496 ], "P_xyz": [ -0.075, 10.031, 0.046 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.504, "theta": -150.910, "eta_prime": -139.564, "theta_prime": -142.946, "eta_base": -96.924, "theta_base": -125.507, "v0": 0.532, "v1": -23.190, "v2": 35.737, "v3": -36.443, "v4": 22.577, "amplitude": 37.533, "phase_angle": 17.793, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.010, "origin": [ 313.693, 211.920, 200.350 ], "x_axis": [ -0.392, -0.014, -0.920 ], "y_axis": [ -0.896, 0.232, 0.378 ], "z_axis": [ 0.208, 0.973, -0.103 ], "quaternion": [ 0.429, -0.346, 0.657, 0.514 ] } }, { "index": 1232, "index_chain": 1232, "chain_name": "a", "nt_resnum": 1233, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1233", "linked_nts": [ "///a/1232", "///a/1234" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -78.612, "beta": -143.922, "gamma": 54.567, "delta": 138.604, "epsilon": 11.176, "zeta": -70.258, "epsilon_zeta": -278.565, "bb_type": "--", "chi": -128.985, "glyco_bond": "anti", "C5prime_xyz": [ -1.881, 8.621, -0.818 ], "P_xyz": [ -0.051, 9.738, 0.693 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -164.300, "theta": 77.650, "eta_prime": -126.767, "theta_prime": 31.253, "eta_base": -111.528, "theta_base": -0.003, "v0": -21.448, "v1": 33.017, "v2": -31.413, "v3": 19.891, "v4": 0.741, "amplitude": 33.443, "phase_angle": 159.933, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1[", "suiteness": 0.734, "filter_rmsd": 0.035, "frame": { "rmsd": 0.011, "origin": [ 315.496, 216.106, 197.490 ], "x_axis": [ -0.777, -0.492, -0.392 ], "y_axis": [ -0.508, 0.124, 0.852 ], "z_axis": [ -0.371, 0.862, -0.346 ], "quaternion": [ 0.007, -0.334, 0.750, 0.572 ] } }, { "index": 1233, "index_chain": 1233, "chain_name": "a", "nt_resnum": 1234, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1234", "linked_nts": [ "///a/1233", "///a/1235" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -85.686, "beta": -133.600, "gamma": -49.531, "delta": 150.279, "epsilon": -151.895, "zeta": 6.702, "epsilon_zeta": 201.402, "bb_type": "--", "chi": -93.599, "glyco_bond": "anti", "C5prime_xyz": [ -2.389, 7.754, -2.357 ], "P_xyz": [ -2.793, 10.009, -3.613 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 67.092, "theta": -36.856, "eta_prime": 74.722, "theta_prime": -34.027, "eta_base": 95.880, "theta_base": 5.439, "v0": -19.769, "v1": 35.328, "v2": -36.396, "v3": 25.971, "v4": -4.095, "amplitude": 37.294, "phase_angle": 167.403, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.101, "frame": { "rmsd": 0.006, "origin": [ 315.472, 223.134, 216.007 ], "x_axis": [ -0.933, 0.358, 0.032 ], "y_axis": [ -0.234, -0.537, -0.811 ], "z_axis": [ -0.273, -0.764, 0.585 ], "quaternion": [ 0.169, -0.069, -0.450, 0.874 ] } }, { "index": 1234, "index_chain": 1234, "chain_name": "a", "nt_resnum": 1235, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1235", "linked_nts": [ "///a/1234", "///a/1236" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": 174.540, "beta": -161.736, "gamma": 146.275, "delta": 81.351, "epsilon": -134.374, "zeta": -73.075, "epsilon_zeta": -61.299, "bb_type": "BI", "chi": -175.044, "glyco_bond": "anti", "C5prime_xyz": [ -1.244, 8.484, 1.416 ], "P_xyz": [ 0.925, 9.544, 0.422 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.932, "theta": -145.596, "eta_prime": -152.309, "theta_prime": -147.108, "eta_base": -146.945, "theta_base": -123.931, "v0": 4.941, "v1": -26.730, "v2": 37.248, "v3": -35.410, "v4": 19.248, "amplitude": 37.989, "phase_angle": 11.338, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.007, "frame": { "rmsd": 0.007, "origin": [ 319.031, 215.089, 200.713 ], "x_axis": [ 0.901, 0.404, 0.158 ], "y_axis": [ -0.197, 0.056, 0.979 ], "z_axis": [ 0.387, -0.913, 0.130 ], "quaternion": [ 0.722, 0.655, 0.079, 0.208 ] } }, { "index": 1235, "index_chain": 1235, "chain_name": "a", "nt_resnum": 1236, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1236", "linked_nts": [ "///a/1235", "///a/1237" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -61.614, "beta": 177.511, "gamma": 46.641, "delta": 79.615, "epsilon": -160.251, "zeta": -88.975, "epsilon_zeta": -71.277, "bb_type": "BI", "chi": -163.996, "glyco_bond": "anti", "C5prime_xyz": [ -1.656, 8.791, 0.719 ], "P_xyz": [ 0.767, 9.500, 1.373 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.916, "theta": -135.749, "eta_prime": 178.412, "theta_prime": -138.804, "eta_base": -141.534, "theta_base": -102.645, "v0": -1.767, "v1": -21.117, "v2": 34.730, "v3": -36.739, "v4": 24.301, "amplitude": 37.278, "phase_angle": 21.307, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.832, "filter_rmsd": 0.007, "frame": { "rmsd": 0.007, "origin": [ 321.785, 212.691, 199.523 ], "x_axis": [ 0.504, 0.587, 0.633 ], "y_axis": [ -0.650, -0.225, 0.726 ], "z_axis": [ 0.569, -0.777, 0.269 ], "quaternion": [ 0.622, 0.604, -0.026, 0.497 ] } }, { "index": 1236, "index_chain": 1236, "chain_name": "a", "nt_resnum": 1237, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1237", "linked_nts": [ "///a/1236", "///a/1238" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem", "alpha": 165.098, "beta": -143.021, "gamma": 158.003, "delta": 81.267, "epsilon": -123.430, "zeta": -94.713, "epsilon_zeta": -28.717, "bb_type": "--", "chi": -156.569, "glyco_bond": "anti", "C5prime_xyz": [ -1.463, 8.742, 0.335 ], "P_xyz": [ 0.335, 9.414, -1.436 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.627, "theta": -152.261, "eta_prime": 178.889, "theta_prime": -152.570, "eta_base": -130.900, "theta_base": -126.877, "v0": 1.553, "v1": -23.555, "v2": 35.423, "v3": -35.536, "v4": 21.435, "amplitude": 36.905, "phase_angle": 16.292, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.230, "filter_rmsd": 0.106, "frame": { "rmsd": 0.008, "origin": [ 324.399, 212.124, 200.286 ], "x_axis": [ 0.132, 0.306, 0.943 ], "y_axis": [ -0.543, -0.774, 0.327 ], "z_axis": [ 0.829, -0.555, 0.064 ], "quaternion": [ 0.325, 0.678, -0.087, 0.653 ] } }, { "index": 1237, "index_chain": 1237, "chain_name": "a", "nt_resnum": 1238, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1238", "linked_nts": [ "///a/1237", "///a/1239" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -40.701, "beta": 153.755, "gamma": 41.313, "delta": 78.790, "epsilon": -149.451, "zeta": -75.511, "epsilon_zeta": -73.940, "bb_type": "BI", "chi": -157.524, "glyco_bond": "anti", "C5prime_xyz": [ -1.628, 8.873, 0.343 ], "P_xyz": [ 0.940, 9.362, 0.405 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.697, "theta": -147.316, "eta_prime": 178.298, "theta_prime": -149.394, "eta_base": -142.545, "theta_base": -128.157, "v0": -2.012, "v1": -21.548, "v2": 35.544, "v3": -37.639, "v4": 24.974, "amplitude": 38.201, "phase_angle": 21.494, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.220, "filter_rmsd": 0.060, "frame": { "rmsd": 0.007, "origin": [ 328.212, 210.696, 202.136 ], "x_axis": [ -0.498, 0.050, 0.866 ], "y_axis": [ -0.520, -0.816, -0.253 ], "z_axis": [ 0.694, -0.576, 0.432 ], "quaternion": [ 0.172, 0.470, -0.250, 0.829 ] } }, { "index": 1238, "index_chain": 1238, "chain_name": "a", "nt_resnum": 1239, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1239", "linked_nts": [ "///a/1238", "///a/1240" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -64.750, "beta": 166.193, "gamma": 54.150, "delta": 76.826, "epsilon": -129.725, "zeta": -57.691, "epsilon_zeta": -72.034, "bb_type": "BI", "chi": -165.532, "glyco_bond": "anti", "C5prime_xyz": [ -1.681, 8.770, 0.800 ], "P_xyz": [ 0.822, 9.487, 0.883 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.402, "theta": -136.711, "eta_prime": 174.874, "theta_prime": -144.186, "eta_base": -150.187, "theta_base": -133.217, "v0": -0.233, "v1": -23.926, "v2": 37.668, "v3": -38.792, "v4": 24.578, "amplitude": 39.813, "phase_angle": 18.893, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.919, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 330.626, 210.120, 204.423 ], "x_axis": [ -0.831, -0.202, 0.519 ], "y_axis": [ -0.179, -0.785, -0.593 ], "z_axis": [ 0.527, -0.585, 0.616 ], "quaternion": [ -0.007, 0.291, -0.328, 0.899 ] } }, { "index": 1239, "index_chain": 1239, "chain_name": "a", "nt_resnum": 1240, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1240", "linked_nts": [ "///a/1239", "///a/1241" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -112.695, "beta": 115.052, "gamma": 142.963, "delta": 84.062, "epsilon": -141.857, "zeta": -61.742, "epsilon_zeta": -80.115, "bb_type": "BI", "chi": 174.230, "glyco_bond": "anti", "C5prime_xyz": [ -1.464, 8.344, 1.966 ], "P_xyz": [ -0.252, 10.275, 0.672 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -177.114, "theta": -136.726, "eta_prime": -171.523, "theta_prime": -135.154, "eta_base": -145.320, "theta_base": -68.753, "v0": 0.256, "v1": -21.002, "v2": 32.530, "v3": -33.355, "v4": 20.904, "amplitude": 34.252, "phase_angle": 18.244, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.044, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 331.981, 210.090, 208.035 ], "x_axis": [ -0.922, -0.344, 0.176 ], "y_axis": [ 0.141, -0.724, -0.675 ], "z_axis": [ 0.360, -0.598, 0.716 ], "quaternion": [ -0.132, 0.146, -0.347, 0.917 ] } }, { "index": 1240, "index_chain": 1240, "chain_name": "a", "nt_resnum": 1241, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1241", "linked_nts": [ "///a/1240", "///a/1242" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical", "alpha": 179.968, "beta": -152.847, "gamma": 136.736, "delta": 81.527, "epsilon": -147.918, "zeta": -90.013, "epsilon_zeta": -57.905, "bb_type": "BI", "chi": -139.386, "glyco_bond": "anti", "C5prime_xyz": [ -1.829, 8.729, -0.727 ], "P_xyz": [ 0.041, 9.026, -2.522 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 140.302, "theta": -166.122, "eta_prime": 178.172, "theta_prime": -172.967, "eta_base": -94.992, "theta_base": -168.911, "v0": -2.709, "v1": -19.151, "v2": 32.420, "v3": -34.964, "v4": 23.805, "amplitude": 35.216, "phase_angle": 22.987, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.106, "frame": { "rmsd": 0.007, "origin": [ 329.981, 207.111, 209.335 ], "x_axis": [ -0.367, -0.899, -0.239 ], "y_axis": [ 0.930, -0.361, -0.071 ], "z_axis": [ -0.022, -0.249, 0.968 ], "quaternion": [ 0.557, 0.080, 0.097, -0.821 ] } }, { "index": 1241, "index_chain": 1241, "chain_name": "a", "nt_resnum": 1242, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1242", "linked_nts": [ "///a/1241", "///a/1243" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -52.277, "beta": -177.965, "gamma": 30.338, "delta": 76.917, "epsilon": -155.384, "zeta": -87.107, "epsilon_zeta": -68.277, "bb_type": "BI", "chi": -161.212, "glyco_bond": "anti", "C5prime_xyz": [ -1.780, 8.769, 0.519 ], "P_xyz": [ 0.397, 9.913, 1.346 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.073, "theta": -175.628, "eta_prime": 165.049, "theta_prime": -170.263, "eta_base": 176.308, "theta_base": -158.157, "v0": -1.554, "v1": -22.882, "v2": 37.133, "v3": -39.104, "v4": 25.660, "amplitude": 39.724, "phase_angle": 20.810, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.197, "filter_rmsd": 0.036, "frame": { "rmsd": 0.014, "origin": [ 329.484, 207.041, 216.190 ], "x_axis": [ -0.324, -0.630, -0.706 ], "y_axis": [ 0.919, -0.032, -0.393 ], "z_axis": [ 0.225, -0.776, 0.590 ], "quaternion": [ 0.555, 0.172, 0.419, -0.697 ] } }, { "index": 1242, "index_chain": 1242, "chain_name": "a", "nt_resnum": 1243, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1243", "linked_nts": [ "///a/1242", "///a/1244" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -70.054, "beta": 157.872, "gamma": 72.594, "delta": 80.624, "epsilon": -146.212, "zeta": -59.076, "epsilon_zeta": -87.136, "bb_type": "BI", "chi": -157.839, "glyco_bond": "anti", "C5prime_xyz": [ -1.465, 8.836, 0.386 ], "P_xyz": [ 1.007, 9.248, -0.344 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.954, "theta": -122.775, "eta_prime": 179.904, "theta_prime": -136.674, "eta_base": -165.144, "theta_base": -136.323, "v0": 0.600, "v1": -23.738, "v2": 36.477, "v3": -37.090, "v4": 23.034, "amplitude": 38.286, "phase_angle": 17.680, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.361, "filter_rmsd": 0.068, "frame": { "rmsd": 0.009, "origin": [ 328.573, 205.679, 219.165 ], "x_axis": [ -0.013, -0.652, -0.758 ], "y_axis": [ 1.000, -0.012, -0.007 ], "z_axis": [ -0.005, -0.758, 0.652 ], "quaternion": [ 0.638, 0.294, 0.295, -0.648 ] } }, { "index": 1243, "index_chain": 1243, "chain_name": "a", "nt_resnum": 1244, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1244", "linked_nts": [ "///a/1243", "///a/1245" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -168.960, "beta": 150.965, "gamma": -172.833, "delta": 82.604, "epsilon": -129.321, "zeta": -92.881, "epsilon_zeta": -36.439, "bb_type": "--", "chi": -173.237, "glyco_bond": "anti", "C5prime_xyz": [ -1.431, 8.512, 1.302 ], "P_xyz": [ -0.987, 11.006, 0.640 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -168.011, "theta": 163.073, "eta_prime": -164.469, "theta_prime": 178.782, "eta_base": -151.676, "theta_base": -143.148, "v0": 1.764, "v1": -23.732, "v2": 35.323, "v3": -35.267, "v4": 21.128, "amplitude": 36.723, "phase_angle": 15.866, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1f", "suiteness": 0.548, "filter_rmsd": 0.040, "frame": { "rmsd": 0.010, "origin": [ 326.335, 198.900, 224.086 ], "x_axis": [ 0.237, -0.639, -0.732 ], "y_axis": [ 0.885, 0.453, -0.108 ], "z_axis": [ 0.401, -0.622, 0.673 ], "quaternion": [ 0.769, 0.167, 0.368, -0.496 ] } }, { "index": 1244, "index_chain": 1244, "chain_name": "a", "nt_resnum": 1245, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1245", "linked_nts": [ "///a/1244", "///a/1246" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -66.106, "beta": 143.334, "gamma": 73.450, "delta": 85.206, "epsilon": -144.723, "zeta": -63.768, "epsilon_zeta": -80.955, "bb_type": "BI", "chi": -158.536, "glyco_bond": "anti", "C5prime_xyz": [ -1.387, 8.652, 0.462 ], "P_xyz": [ 1.024, 8.774, -0.524 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.786, "theta": -127.627, "eta_prime": -175.119, "theta_prime": -135.427, "eta_base": -133.830, "theta_base": -93.204, "v0": 2.407, "v1": -23.477, "v2": 34.379, "v3": -33.900, "v4": 19.890, "amplitude": 35.554, "phase_angle": 14.775, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.190, "filter_rmsd": 0.039, "frame": { "rmsd": 0.013, "origin": [ 326.617, 196.398, 225.705 ], "x_axis": [ 0.700, -0.424, -0.575 ], "y_axis": [ 0.705, 0.540, 0.460 ], "z_axis": [ 0.116, -0.727, 0.677 ], "quaternion": [ 0.854, 0.347, 0.202, -0.330 ] } }, { "index": 1245, "index_chain": 1245, "chain_name": "a", "nt_resnum": 1246, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1246", "linked_nts": [ "///a/1245", "///a/1247" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -82.103, "beta": 170.480, "gamma": 61.383, "delta": 80.387, "epsilon": -148.585, "zeta": -75.538, "epsilon_zeta": -73.046, "bb_type": "BI", "chi": -163.535, "glyco_bond": "anti", "C5prime_xyz": [ -1.272, 8.585, 0.701 ], "P_xyz": [ 1.314, 8.878, 0.455 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.931, "theta": -147.880, "eta_prime": 174.790, "theta_prime": -151.797, "eta_base": -116.035, "theta_base": -138.732, "v0": 5.038, "v1": -27.822, "v2": 38.907, "v3": -36.921, "v4": 20.097, "amplitude": 39.691, "phase_angle": 11.406, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.680, "filter_rmsd": 0.040, "frame": { "rmsd": 0.013, "origin": [ 329.062, 193.377, 226.454 ], "x_axis": [ 0.957, 0.247, -0.149 ], "y_axis": [ -0.023, 0.581, 0.813 ], "z_axis": [ 0.288, -0.775, 0.562 ], "quaternion": [ 0.881, 0.451, 0.124, 0.077 ] } }, { "index": 1246, "index_chain": 1246, "chain_name": "a", "nt_resnum": 1247, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1247", "linked_nts": [ "///a/1246", "///a/1248" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -65.243, "beta": 167.328, "gamma": 55.661, "delta": 63.343, "epsilon": 84.965, "zeta": 76.076, "epsilon_zeta": 8.889, "bb_type": "--", "chi": -177.126, "glyco_bond": "anti", "C5prime_xyz": [ -1.453, 8.572, 1.464 ], "P_xyz": [ 1.062, 9.215, 1.567 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -175.079, "theta": -145.689, "eta_prime": -163.597, "theta_prime": -149.929, "eta_base": -135.640, "theta_base": -134.921, "v0": 5.121, "v1": -31.617, "v2": 45.260, "v3": -43.311, "v4": 24.080, "amplitude": 46.342, "phase_angle": 12.410, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.297, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 330.322, 189.705, 226.493 ], "x_axis": [ 0.798, 0.592, 0.112 ], "y_axis": [ -0.428, 0.428, 0.796 ], "z_axis": [ 0.423, -0.683, 0.595 ], "quaternion": [ 0.840, 0.440, 0.093, 0.304 ] } }, { "index": 1247, "index_chain": 1247, "chain_name": "a", "nt_resnum": 1248, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1248", "linked_nts": [ "///a/1247", "///a/1249" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -164.038, "beta": 156.524, "gamma": 88.805, "delta": 76.950, "epsilon": -141.670, "zeta": -76.679, "epsilon_zeta": -64.991, "bb_type": "BI", "chi": 179.020, "glyco_bond": "anti", "C5prime_xyz": [ -1.789, 8.600, 1.654 ], "P_xyz": [ 0.615, 9.555, 1.413 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.783, "theta": -149.842, "eta_prime": 175.352, "theta_prime": -150.694, "eta_base": -153.068, "theta_base": -125.557, "v0": -2.254, "v1": -22.168, "v2": 36.820, "v3": -39.168, "v4": 26.091, "amplitude": 39.658, "phase_angle": 21.809, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 332.169, 185.784, 226.600 ], "x_axis": [ 0.559, 0.694, 0.453 ], "y_axis": [ -0.758, 0.207, 0.618 ], "z_axis": [ 0.336, -0.689, 0.642 ], "quaternion": [ 0.776, 0.421, -0.038, 0.468 ] } }, { "index": 1248, "index_chain": 1248, "chain_name": "a", "nt_resnum": 1249, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1249", "linked_nts": [ "///a/1248", "///a/1250" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix-end,stem-end,multiplet", "alpha": -59.618, "beta": 169.039, "gamma": 56.618, "delta": 80.081, "epsilon": -116.573, "zeta": -136.602, "epsilon_zeta": 20.029, "bb_type": "--", "chi": -169.245, "glyco_bond": "anti", "C5prime_xyz": [ -1.679, 8.749, 1.048 ], "P_xyz": [ 0.826, 9.380, 1.456 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.769, "theta": -163.128, "eta_prime": -170.661, "theta_prime": -160.092, "eta_base": -134.398, "theta_base": -120.529, "v0": -2.624, "v1": -20.485, "v2": 34.440, "v3": -36.864, "v4": 24.934, "amplitude": 37.282, "phase_angle": 22.515, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.900, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 335.218, 183.552, 227.738 ], "x_axis": [ 0.073, 0.660, 0.748 ], "y_axis": [ -0.948, -0.187, 0.258 ], "z_axis": [ 0.310, -0.728, 0.612 ], "quaternion": [ 0.612, 0.403, -0.179, 0.657 ] } }, { "index": 1249, "index_chain": 1249, "chain_name": "a", "nt_resnum": 1250, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1250", "linked_nts": [ "///a/1249", "///a/1251" ], "nt_type": "RNA", "dbn": ".", "summary": "syn", "alpha": 65.598, "beta": -170.932, "gamma": -42.246, "delta": 81.681, "epsilon": -139.027, "zeta": -176.832, "epsilon_zeta": 37.805, "bb_type": "--", "chi": 38.810, "glyco_bond": "syn", "C5prime_xyz": [ -5.545, 3.817, 0.525 ], "P_xyz": [ -7.635, 2.358, -0.111 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -139.556, "theta": 104.717, "eta_prime": -153.024, "theta_prime": 124.529, "eta_base": -149.711, "theta_base": -167.101, "v0": 0.753, "v1": -22.817, "v2": 35.027, "v3": -35.545, "v4": 21.904, "amplitude": 36.716, "phase_angle": 17.446, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.112, "frame": { "rmsd": 0.014, "origin": [ 335.706, 174.576, 234.226 ], "x_axis": [ 0.836, -0.465, 0.291 ], "y_axis": [ 0.012, -0.516, -0.857 ], "z_axis": [ 0.548, 0.720, -0.426 ], "quaternion": [ -0.473, 0.833, -0.136, 0.252 ] } }, { "index": 1250, "index_chain": 1250, "chain_name": "a", "nt_resnum": 1251, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1251", "linked_nts": [ "///a/1250", "///a/1252" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": -23.305, "beta": 105.956, "gamma": 139.665, "delta": 148.015, "epsilon": -147.997, "zeta": 70.755, "epsilon_zeta": 141.249, "bb_type": "--", "chi": -145.444, "glyco_bond": "anti", "C5prime_xyz": [ -1.581, 8.629, 0.200 ], "P_xyz": [ 0.001, 9.312, -1.776 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -27.808, "theta": -28.144, "eta_prime": -62.321, "theta_prime": -4.327, "eta_base": -143.433, "theta_base": 33.760, "v0": -18.065, "v1": 33.063, "v2": -34.589, "v3": 25.075, "v4": -4.587, "amplitude": 35.285, "phase_angle": 168.599, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.104, "frame": { "rmsd": 0.003, "origin": [ 324.202, 164.125, 229.621 ], "x_axis": [ -0.217, 0.043, 0.975 ], "y_axis": [ 0.368, 0.929, 0.041 ], "z_axis": [ -0.904, 0.367, -0.218 ], "quaternion": [ 0.611, -0.134, -0.769, -0.133 ] } }, { "index": 1251, "index_chain": 1251, "chain_name": "a", "nt_resnum": 1252, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1252", "linked_nts": [ "///a/1251", "///a/1253" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix-end,stem-end", "alpha": -101.399, "beta": 149.165, "gamma": 75.012, "delta": 82.747, "epsilon": -140.233, "zeta": -91.308, "epsilon_zeta": -48.925, "bb_type": "BI", "chi": -169.945, "glyco_bond": "anti", "C5prime_xyz": [ -1.499, 8.663, 1.109 ], "P_xyz": [ 1.032, 9.053, 0.548 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.017, "theta": -149.625, "eta_prime": -162.891, "theta_prime": -153.147, "eta_base": -156.255, "theta_base": -143.245, "v0": 0.262, "v1": -21.894, "v2": 34.019, "v3": -34.788, "v4": 21.815, "amplitude": 35.813, "phase_angle": 18.211, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 334.807, 175.008, 224.964 ], "x_axis": [ 0.340, -0.889, -0.307 ], "y_axis": [ -0.939, -0.340, -0.057 ], "z_axis": [ -0.054, 0.308, -0.950 ], "quaternion": [ -0.112, 0.811, -0.563, -0.111 ] } }, { "index": 1252, "index_chain": 1252, "chain_name": "a", "nt_resnum": 1253, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1253", "linked_nts": [ "///a/1252", "///a/1254" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -41.993, "beta": 163.008, "gamma": 40.197, "delta": 80.814, "epsilon": -111.246, "zeta": -56.792, "epsilon_zeta": -54.455, "bb_type": "--", "chi": -158.884, "glyco_bond": "anti", "C5prime_xyz": [ -1.580, 8.880, 0.430 ], "P_xyz": [ 0.913, 9.464, 0.946 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.617, "theta": -101.992, "eta_prime": -172.918, "theta_prime": -88.778, "eta_base": -154.641, "theta_base": -47.657, "v0": -2.512, "v1": -20.252, "v2": 33.995, "v3": -36.388, "v4": 24.603, "amplitude": 36.786, "phase_angle": 22.460, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.356, "filter_rmsd": 0.062, "frame": { "rmsd": 0.008, "origin": [ 336.448, 176.982, 222.117 ], "x_axis": [ -0.085, -0.981, -0.173 ], "y_axis": [ -0.996, 0.082, 0.028 ], "z_axis": [ -0.013, 0.175, -0.985 ], "quaternion": [ 0.055, -0.674, 0.733, 0.069 ] } }, { "index": 1253, "index_chain": 1253, "chain_name": "a", "nt_resnum": 1254, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1254", "linked_nts": [ "///a/1253", "///a/1255" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-stack", "alpha": -67.246, "beta": 138.175, "gamma": 105.541, "delta": 85.145, "epsilon": -149.519, "zeta": -177.263, "epsilon_zeta": 27.744, "bb_type": "--", "chi": -141.468, "glyco_bond": "anti", "C5prime_xyz": [ -1.671, 8.802, -0.618 ], "P_xyz": [ -0.161, 8.970, -2.755 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.403, "theta": 110.982, "eta_prime": -134.697, "theta_prime": 114.645, "eta_base": -74.261, "theta_base": 143.912, "v0": -3.916, "v1": -17.065, "v2": 30.211, "v3": -33.325, "v4": 23.575, "amplitude": 33.388, "phase_angle": 25.199, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.061, "frame": { "rmsd": 0.006, "origin": [ 331.004, 172.226, 218.214 ], "x_axis": [ -0.897, -0.256, -0.361 ], "y_axis": [ -0.189, 0.959, -0.210 ], "z_axis": [ 0.400, -0.121, -0.908 ], "quaternion": [ 0.196, -0.114, 0.970, -0.085 ] } }, { "index": 1254, "index_chain": 1254, "chain_name": "a", "nt_resnum": 1255, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1255", "linked_nts": [ "///a/1254", "///a/1256" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -43.583, "beta": 139.689, "gamma": 53.288, "delta": 82.034, "epsilon": -136.922, "zeta": -70.179, "epsilon_zeta": -66.743, "bb_type": "BI", "chi": 178.955, "glyco_bond": "anti", "C5prime_xyz": [ -1.262, 8.286, 1.751 ], "P_xyz": [ 1.340, 8.137, 1.722 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -165.503, "theta": -126.778, "eta_prime": -172.192, "theta_prime": -128.508, "eta_base": 179.866, "theta_base": -96.782, "v0": 4.872, "v1": -26.397, "v2": 36.649, "v3": -34.862, "v4": 18.931, "amplitude": 37.373, "phase_angle": 11.293, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "3a", "suiteness": 0.342, "filter_rmsd": 0.040, "frame": { "rmsd": 0.011, "origin": [ 341.303, 177.933, 213.896 ], "x_axis": [ -0.471, -0.860, -0.198 ], "y_axis": [ -0.871, 0.418, 0.257 ], "z_axis": [ -0.138, 0.293, -0.946 ], "quaternion": [ 0.018, -0.514, 0.842, 0.164 ] } }, { "index": 1255, "index_chain": 1255, "chain_name": "a", "nt_resnum": 1256, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1256", "linked_nts": [ "///a/1255", "///a/1257" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -65.111, "beta": 178.616, "gamma": 52.125, "delta": 81.984, "epsilon": -130.563, "zeta": -66.170, "epsilon_zeta": -64.393, "bb_type": "BI", "chi": -171.654, "glyco_bond": "anti", "C5prime_xyz": [ -1.049, 8.441, 1.232 ], "P_xyz": [ 1.515, 8.502, 1.775 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.521, "theta": -123.832, "eta_prime": -173.660, "theta_prime": -118.698, "eta_base": -120.419, "theta_base": -66.112, "v0": 6.406, "v1": -27.930, "v2": 37.724, "v3": -35.025, "v4": 18.089, "amplitude": 38.215, "phase_angle": 9.187, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.918, "filter_rmsd": 0.040, "frame": { "rmsd": 0.010, "origin": [ 340.611, 177.058, 209.506 ], "x_axis": [ -0.949, -0.292, 0.121 ], "y_axis": [ -0.218, 0.881, 0.420 ], "z_axis": [ -0.230, 0.372, -0.899 ], "quaternion": [ -0.091, -0.132, 0.966, 0.205 ] } }, { "index": 1256, "index_chain": 1256, "chain_name": "a", "nt_resnum": 1257, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1257", "linked_nts": [ "///a/1256", "///a/1258" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix", "alpha": -65.220, "beta": 163.902, "gamma": 56.312, "delta": 83.461, "epsilon": -130.870, "zeta": -73.187, "epsilon_zeta": -57.684, "bb_type": "BI", "chi": -175.656, "glyco_bond": "anti", "C5prime_xyz": [ -1.069, 8.396, 1.437 ], "P_xyz": [ 1.554, 8.350, 1.601 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.483, "theta": -124.714, "eta_prime": -173.638, "theta_prime": -121.226, "eta_base": -97.516, "theta_base": -71.252, "v0": 6.988, "v1": -27.903, "v2": 37.104, "v3": -34.013, "v4": 17.084, "amplitude": 37.476, "phase_angle": 8.078, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.787, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 336.310, 178.022, 207.592 ], "x_axis": [ -0.628, 0.548, 0.553 ], "y_axis": [ 0.695, 0.714, 0.082 ], "z_axis": [ -0.350, 0.436, -0.829 ], "quaternion": [ -0.253, 0.349, 0.890, 0.146 ] } }, { "index": 1257, "index_chain": 1257, "chain_name": "a", "nt_resnum": 1258, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1258", "linked_nts": [ "///a/1257", "///a/1259" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -54.244, "beta": 160.706, "gamma": 51.173, "delta": 82.874, "epsilon": -119.600, "zeta": -123.026, "epsilon_zeta": 3.426, "bb_type": "--", "chi": -164.956, "glyco_bond": "anti", "C5prime_xyz": [ -1.131, 8.648, 0.862 ], "P_xyz": [ 1.504, 8.587, 0.993 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.342, "theta": -161.359, "eta_prime": -168.678, "theta_prime": -155.851, "eta_base": -97.701, "theta_base": -148.806, "v0": 4.301, "v1": -25.455, "v2": 35.910, "v3": -34.323, "v4": 18.917, "amplitude": 36.711, "phase_angle": 11.997, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.738, "filter_rmsd": 0.074, "frame": { "rmsd": 0.014, "origin": [ 333.652, 181.293, 206.989 ], "x_axis": [ 0.215, 0.889, 0.405 ], "y_axis": [ 0.871, 0.013, -0.492 ], "z_axis": [ -0.442, 0.458, -0.771 ], "quaternion": [ -0.338, 0.702, 0.626, -0.013 ] } }, { "index": 1258, "index_chain": 1258, "chain_name": "a", "nt_resnum": 1259, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1259", "linked_nts": [ "///a/1258", "///a/1260" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix", "alpha": -43.206, "beta": 130.714, "gamma": 57.252, "delta": 79.795, "epsilon": -148.897, "zeta": -73.136, "epsilon_zeta": -75.760, "bb_type": "BI", "chi": -157.425, "glyco_bond": "anti", "C5prime_xyz": [ -1.444, 8.808, 0.368 ], "P_xyz": [ 1.042, 8.699, -0.445 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.811, "theta": -109.041, "eta_prime": 178.964, "theta_prime": -130.467, "eta_base": -166.138, "theta_base": -113.571, "v0": 1.203, "v1": -24.020, "v2": 36.495, "v3": -36.790, "v4": 22.387, "amplitude": 38.126, "phase_angle": 16.820, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "7a", "suiteness": 0.383, "filter_rmsd": 0.067, "frame": { "rmsd": 0.009, "origin": [ 330.668, 181.844, 203.951 ], "x_axis": [ 0.432, 0.855, 0.286 ], "y_axis": [ 0.736, -0.151, -0.660 ], "z_axis": [ -0.521, 0.496, -0.695 ], "quaternion": [ -0.383, 0.755, 0.527, -0.078 ] } }, { "index": 1259, "index_chain": 1259, "chain_name": "a", "nt_resnum": 1260, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1260", "linked_nts": [ "///a/1259", "///a/1261" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": 158.905, "beta": -172.109, "gamma": 165.833, "delta": 80.464, "epsilon": -112.041, "zeta": -74.131, "epsilon_zeta": -37.910, "bb_type": "--", "chi": -167.644, "glyco_bond": "anti", "C5prime_xyz": [ -1.164, 8.558, 0.973 ], "P_xyz": [ 0.317, 10.167, -0.457 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 149.353, "theta": -123.308, "eta_prime": 165.018, "theta_prime": -172.545, "eta_base": -152.242, "theta_base": 142.012, "v0": 6.368, "v1": -28.224, "v2": 38.227, "v3": -35.607, "v4": 18.469, "amplitude": 38.747, "phase_angle": 9.404, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.629, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 329.137, 185.017, 203.765 ], "x_axis": [ 0.892, 0.439, 0.111 ], "y_axis": [ 0.308, -0.410, -0.859 ], "z_axis": [ -0.331, 0.800, -0.500 ], "quaternion": [ -0.496, 0.837, 0.223, -0.066 ] } }, { "index": 1260, "index_chain": 1260, "chain_name": "a", "nt_resnum": 1261, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1261", "linked_nts": [ "///a/1260", "///a/1262" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": 168.551, "beta": 135.757, "gamma": 51.199, "delta": 85.829, "epsilon": -98.322, "zeta": -111.241, "epsilon_zeta": 12.919, "bb_type": "--", "chi": -153.357, "glyco_bond": "anti", "C5prime_xyz": [ -1.340, 8.791, 0.146 ], "P_xyz": [ 1.234, 8.566, -0.271 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 10.273, "theta": -122.687, "eta_prime": 50.447, "theta_prime": -119.027, "eta_base": 35.250, "theta_base": -79.184, "v0": 0.279, "v1": -20.783, "v2": 32.105, "v3": -32.860, "v4": 20.591, "amplitude": 33.786, "phase_angle": 18.149, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.439, "filter_rmsd": 0.066, "frame": { "rmsd": 0.007, "origin": [ 319.297, 185.027, 194.686 ], "x_axis": [ 0.101, -0.989, -0.107 ], "y_axis": [ 0.993, 0.094, 0.074 ], "z_axis": [ -0.063, -0.114, 0.991 ], "quaternion": [ 0.739, 0.063, 0.015, -0.670 ] } }, { "index": 1261, "index_chain": 1261, "chain_name": "a", "nt_resnum": 1262, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1262", "linked_nts": [ "///a/1261", "///a/1263" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -35.307, "beta": 134.263, "gamma": 43.679, "delta": 84.604, "epsilon": -156.000, "zeta": -85.072, "epsilon_zeta": -70.928, "bb_type": "BI", "chi": -138.865, "glyco_bond": "anti", "C5prime_xyz": [ -1.367, 8.713, -0.722 ], "P_xyz": [ 1.178, 8.385, -1.305 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.407, "theta": -149.741, "eta_prime": -178.873, "theta_prime": -157.855, "eta_base": -124.655, "theta_base": -165.870, "v0": 0.523, "v1": -20.845, "v2": 32.063, "v3": -32.652, "v4": 20.278, "amplitude": 33.663, "phase_angle": 17.737, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.260, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 321.548, 182.109, 197.833 ], "x_axis": [ 0.765, -0.476, -0.434 ], "y_axis": [ 0.631, 0.689, 0.356 ], "z_axis": [ 0.130, -0.546, 0.828 ], "quaternion": [ 0.906, 0.249, 0.156, -0.306 ] } }, { "index": 1262, "index_chain": 1262, "chain_name": "a", "nt_resnum": 1263, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1263", "linked_nts": [ "///a/1262", "///a/1264" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": -64.281, "beta": 162.075, "gamma": 59.091, "delta": 81.946, "epsilon": -168.084, "zeta": 33.342, "epsilon_zeta": 158.574, "bb_type": "--", "chi": -137.291, "glyco_bond": "anti", "C5prime_xyz": [ -1.736, 8.714, -0.864 ], "P_xyz": [ 0.714, 9.144, -1.685 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.084, "theta": -66.746, "eta_prime": 177.003, "theta_prime": -73.191, "eta_base": -175.528, "theta_base": -55.214, "v0": -2.967, "v1": -18.770, "v2": 32.029, "v3": -34.637, "v4": 23.748, "amplitude": 34.889, "phase_angle": 23.364, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.784, "filter_rmsd": 0.038, "frame": { "rmsd": 0.010, "origin": [ 320.565, 180.494, 200.547 ], "x_axis": [ 0.861, -0.271, -0.431 ], "y_axis": [ 0.501, 0.597, 0.626 ], "z_axis": [ 0.088, -0.755, 0.650 ], "quaternion": [ 0.881, 0.392, 0.147, -0.219 ] } }, { "index": 1263, "index_chain": 1263, "chain_name": "a", "nt_resnum": 1264, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1264", "linked_nts": [ "///a/1263", "///a/1265" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix", "alpha": -156.580, "beta": 125.231, "gamma": 149.697, "delta": 83.856, "epsilon": -142.454, "zeta": -73.068, "epsilon_zeta": -69.386, "bb_type": "BI", "chi": -173.289, "glyco_bond": "anti", "C5prime_xyz": [ -1.052, 8.390, 1.298 ], "P_xyz": [ -0.266, 10.347, -0.248 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.062, "theta": 179.439, "eta_prime": -143.267, "theta_prime": -171.705, "eta_base": -87.371, "theta_base": -143.550, "v0": 7.899, "v1": -28.442, "v2": 36.985, "v3": -33.453, "v4": 16.223, "amplitude": 37.238, "phase_angle": 6.681, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 330.980, 181.255, 203.422 ], "x_axis": [ 0.567, 0.649, 0.507 ], "y_axis": [ -0.775, 0.212, 0.595 ], "z_axis": [ 0.279, -0.731, 0.623 ], "quaternion": [ 0.775, 0.428, -0.074, 0.460 ] } }, { "index": 1264, "index_chain": 1264, "chain_name": "a", "nt_resnum": 1265, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1265", "linked_nts": [ "///a/1264", "///a/1266" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -62.216, "beta": 177.004, "gamma": 47.353, "delta": 80.889, "epsilon": -163.525, "zeta": -87.232, "epsilon_zeta": -76.293, "bb_type": "BI", "chi": -166.527, "glyco_bond": "anti", "C5prime_xyz": [ -1.345, 8.673, 0.915 ], "P_xyz": [ 1.164, 9.061, 1.534 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.881, "theta": -131.365, "eta_prime": 179.801, "theta_prime": -133.700, "eta_base": -141.094, "theta_base": -99.315, "v0": 2.631, "v1": -24.930, "v2": 36.593, "v3": -36.068, "v4": 21.100, "amplitude": 37.837, "phase_angle": 14.729, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.911, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 333.688, 179.184, 204.637 ], "x_axis": [ -0.014, 0.778, 0.628 ], "y_axis": [ -0.947, -0.212, 0.242 ], "z_axis": [ 0.322, -0.591, 0.740 ], "quaternion": [ 0.615, 0.338, -0.124, 0.701 ] } }, { "index": 1265, "index_chain": 1265, "chain_name": "a", "nt_resnum": 1266, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1266", "linked_nts": [ "///a/1265", "///a/1267" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix", "alpha": 159.652, "beta": -134.260, "gamma": 165.486, "delta": 81.979, "epsilon": -119.787, "zeta": -64.638, "epsilon_zeta": -55.149, "bb_type": "--", "chi": -175.659, "glyco_bond": "anti", "C5prime_xyz": [ -1.484, 8.593, 1.424 ], "P_xyz": [ 0.641, 9.536, 0.246 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.779, "theta": -125.605, "eta_prime": -170.613, "theta_prime": -125.457, "eta_base": -118.666, "theta_base": -64.620, "v0": -1.607, "v1": -20.289, "v2": 33.277, "v3": -35.140, "v4": 23.153, "amplitude": 35.679, "phase_angle": 21.145, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.385, "filter_rmsd": 0.106, "frame": { "rmsd": 0.010, "origin": [ 335.722, 179.288, 207.497 ], "x_axis": [ -0.555, 0.474, 0.684 ], "y_axis": [ -0.691, -0.720, -0.062 ], "z_axis": [ 0.463, -0.507, 0.727 ], "quaternion": [ 0.336, 0.331, -0.164, 0.866 ] } }, { "index": 1266, "index_chain": 1266, "chain_name": "a", "nt_resnum": 1267, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1267", "linked_nts": [ "///a/1266", "///a/1268" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -63.833, "beta": 165.603, "gamma": 46.123, "delta": 83.002, "epsilon": -97.789, "zeta": -110.798, "epsilon_zeta": 13.009, "bb_type": "--", "chi": -155.223, "glyco_bond": "anti", "C5prime_xyz": [ -1.143, 8.683, 0.236 ], "P_xyz": [ 1.475, 8.806, 0.219 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.429, "theta": -142.758, "eta_prime": -173.256, "theta_prime": -135.786, "eta_base": -94.714, "theta_base": -96.590, "v0": 4.763, "v1": -26.015, "v2": 36.171, "v3": -34.382, "v4": 18.785, "amplitude": 36.895, "phase_angle": 11.372, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.523, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 333.321, 178.044, 211.837 ], "x_axis": [ -0.908, -0.408, 0.095 ], "y_axis": [ 0.315, -0.814, -0.487 ], "z_axis": [ 0.276, -0.413, 0.868 ], "quaternion": [ -0.191, 0.098, -0.238, 0.947 ] } }, { "index": 1267, "index_chain": 1267, "chain_name": "a", "nt_resnum": 1268, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1268", "linked_nts": [ "///a/1267", "///a/1269" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -64.471, "beta": 112.385, "gamma": 84.023, "delta": 84.102, "epsilon": 170.780, "zeta": -95.470, "epsilon_zeta": -93.751, "bb_type": "BI", "chi": -143.862, "glyco_bond": "anti", "C5prime_xyz": [ -1.333, 8.649, -0.412 ], "P_xyz": [ 0.255, 7.966, -2.389 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 146.917, "theta": 179.130, "eta_prime": -172.673, "theta_prime": 148.187, "eta_base": -118.363, "theta_base": 148.055, "v0": 6.783, "v1": -27.429, "v2": 36.412, "v3": -33.463, "v4": 16.961, "amplitude": 36.791, "phase_angle": 8.231, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.179, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 333.091, 175.433, 213.919 ], "x_axis": [ -0.672, -0.730, -0.122 ], "y_axis": [ 0.740, -0.667, -0.090 ], "z_axis": [ -0.016, -0.151, 0.988 ], "quaternion": [ -0.403, -0.038, -0.066, 0.912 ] } }, { "index": 1268, "index_chain": 1268, "chain_name": "a", "nt_resnum": 1269, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1269", "linked_nts": [ "///a/1268", "///a/1270" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -60.236, "beta": 156.832, "gamma": 77.009, "delta": 83.688, "epsilon": -119.411, "zeta": -75.299, "epsilon_zeta": -44.112, "bb_type": "--", "chi": -171.407, "glyco_bond": "anti", "C5prime_xyz": [ -1.360, 8.505, 1.225 ], "P_xyz": [ 1.185, 8.874, 0.766 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -166.352, "theta": -123.314, "eta_prime": -169.632, "theta_prime": -124.233, "eta_base": -168.649, "theta_base": -74.468, "v0": 3.663, "v1": -24.727, "v2": 35.235, "v3": -34.094, "v4": 19.215, "amplitude": 36.153, "phase_angle": 12.942, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "&a", "suiteness": 0.116, "filter_rmsd": 0.038, "frame": { "rmsd": 0.011, "origin": [ 337.008, 179.950, 219.189 ], "x_axis": [ -0.791, -0.569, 0.226 ], "y_axis": [ 0.500, -0.813, -0.299 ], "z_axis": [ 0.354, -0.124, 0.927 ], "quaternion": [ -0.284, 0.154, -0.113, 0.939 ] } }, { "index": 1269, "index_chain": 1269, "chain_name": "a", "nt_resnum": 1270, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1270", "linked_nts": [ "///a/1269", "///a/1271" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -62.268, "beta": 155.646, "gamma": 54.476, "delta": 82.323, "epsilon": -143.104, "zeta": -63.881, "epsilon_zeta": -79.223, "bb_type": "BI", "chi": -168.363, "glyco_bond": "anti", "C5prime_xyz": [ -1.417, 8.643, 1.008 ], "P_xyz": [ 1.191, 8.893, 0.976 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.739, "theta": -128.031, "eta_prime": 178.287, "theta_prime": -128.505, "eta_base": -106.409, "theta_base": -83.296, "v0": 2.675, "v1": -24.773, "v2": 36.146, "v3": -35.577, "v4": 20.762, "amplitude": 37.346, "phase_angle": 14.558, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.501, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 335.909, 177.104, 222.260 ], "x_axis": [ -0.115, -0.937, -0.331 ], "y_axis": [ 0.970, -0.033, -0.242 ], "z_axis": [ 0.216, -0.349, 0.912 ], "quaternion": [ 0.664, 0.040, 0.206, -0.718 ] } }, { "index": 1270, "index_chain": 1270, "chain_name": "a", "nt_resnum": 1271, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1271", "linked_nts": [ "///a/1270", "///a/1272" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end,stem-end", "alpha": -74.079, "beta": 168.796, "gamma": 64.378, "delta": 82.151, "epsilon": -113.045, "zeta": -120.535, "epsilon_zeta": 7.491, "bb_type": "--", "chi": -158.490, "glyco_bond": "anti", "C5prime_xyz": [ -1.446, 8.806, 0.437 ], "P_xyz": [ 1.137, 9.235, 0.162 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.568, "theta": -176.317, "eta_prime": -169.596, "theta_prime": -165.451, "eta_base": -106.022, "theta_base": 148.252, "v0": -0.357, "v1": -21.490, "v2": 33.966, "v3": -34.986, "v4": 22.324, "amplitude": 35.942, "phase_angle": 19.089, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.743, "filter_rmsd": 0.063, "frame": { "rmsd": 0.006, "origin": [ 335.985, 173.601, 223.742 ], "x_axis": [ 0.631, -0.664, -0.401 ], "y_axis": [ 0.773, 0.580, 0.257 ], "z_axis": [ 0.062, -0.472, 0.879 ], "quaternion": [ 0.879, 0.207, 0.131, -0.409 ] } }, { "index": 1271, "index_chain": 1271, "chain_name": "a", "nt_resnum": 1272, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1272", "linked_nts": [ "///a/1271", "///a/1273" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical", "alpha": -88.795, "beta": 127.219, "gamma": 95.460, "delta": 149.489, "epsilon": -68.106, "zeta": 95.648, "epsilon_zeta": 196.246, "bb_type": "--", "chi": -103.641, "glyco_bond": "anti", "C5prime_xyz": [ -2.349, 8.139, -1.940 ], "P_xyz": [ -0.256, 7.562, -3.400 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -120.921, "theta": 57.100, "eta_prime": -141.653, "theta_prime": 57.956, "eta_base": 161.786, "theta_base": 122.606, "v0": -22.612, "v1": 37.523, "v2": -37.166, "v3": 25.076, "v4": -1.732, "amplitude": 38.711, "phase_angle": 163.756, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.100, "frame": { "rmsd": 0.006, "origin": [ 333.862, 175.735, 226.877 ], "x_axis": [ 0.472, -0.642, -0.603 ], "y_axis": [ 0.751, -0.065, 0.657 ], "z_axis": [ -0.461, -0.764, 0.452 ], "quaternion": [ 0.682, 0.521, 0.052, -0.511 ] } }, { "index": 1272, "index_chain": 1272, "chain_name": "a", "nt_resnum": 1273, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1273", "linked_nts": [ "///a/1272", "///a/1274" ], "nt_type": "RNA", "dbn": ".", "summary": "syn", "alpha": -166.702, "beta": 114.681, "gamma": 140.205, "delta": 143.498, "epsilon": -98.981, "zeta": -95.110, "epsilon_zeta": -3.870, "bb_type": "--", "chi": 58.492, "glyco_bond": "syn", "C5prime_xyz": [ -5.223, 3.909, 1.304 ], "P_xyz": [ -4.880, 2.855, 3.678 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -133.101, "theta": -159.427, "eta_prime": -161.807, "theta_prime": -160.354, "eta_base": -126.897, "theta_base": -155.787, "v0": -19.737, "v1": 32.169, "v2": -31.749, "v3": 21.261, "v4": -1.160, "amplitude": 33.163, "phase_angle": 163.209, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.044, "frame": { "rmsd": 0.012, "origin": [ 332.837, 179.825, 230.251 ], "x_axis": [ 0.031, -0.282, -0.959 ], "y_axis": [ 0.921, 0.382, -0.082 ], "z_axis": [ 0.389, -0.880, 0.271 ], "quaternion": [ 0.649, 0.308, 0.519, -0.463 ] } }, { "index": 1273, "index_chain": 1273, "chain_name": "a", "nt_resnum": 1274, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1274", "linked_nts": [ "///a/1273", "///a/1275" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack,non-canonical,multiplet", "alpha": -87.366, "beta": 146.798, "gamma": -152.458, "delta": 149.231, "epsilon": -114.803, "zeta": -32.389, "epsilon_zeta": -82.414, "bb_type": "--", "chi": -134.760, "glyco_bond": "anti", "C5prime_xyz": [ -1.533, 8.558, -0.294 ], "P_xyz": [ -0.720, 10.787, -1.350 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -37.349, "theta": -78.498, "eta_prime": -16.757, "theta_prime": -67.712, "eta_base": -45.791, "theta_base": -47.642, "v0": -17.031, "v1": 32.508, "v2": -34.845, "v3": 25.906, "v4": -5.792, "amplitude": 35.324, "phase_angle": 170.555, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "2u", "suiteness": 0.027, "filter_rmsd": 0.040, "frame": { "rmsd": 0.011, "origin": [ 340.694, 195.933, 236.590 ], "x_axis": [ 0.481, -0.079, 0.873 ], "y_axis": [ 0.023, -0.994, -0.103 ], "z_axis": [ 0.876, 0.069, -0.476 ], "quaternion": [ -0.050, 0.859, -0.016, 0.509 ] } }, { "index": 1274, "index_chain": 1274, "chain_name": "a", "nt_resnum": 1275, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1275", "linked_nts": [ "///a/1274", "///a/1276" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -91.924, "beta": -150.550, "gamma": 65.169, "delta": 142.811, "epsilon": -118.095, "zeta": -70.729, "epsilon_zeta": -47.366, "bb_type": "--", "chi": -86.803, "glyco_bond": "anti", "C5prime_xyz": [ -2.971, 7.538, -2.617 ], "P_xyz": [ -0.785, 8.923, -3.108 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.427, "theta": -63.131, "eta_prime": -135.859, "theta_prime": -85.088, "eta_base": -124.597, "theta_base": -50.092, "v0": -25.649, "v1": 37.456, "v2": -34.311, "v3": 20.394, "v4": 3.088, "amplitude": 37.399, "phase_angle": 156.553, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "2[", "suiteness": 0.131, "filter_rmsd": 0.101, "frame": { "rmsd": 0.009, "origin": [ 346.083, 183.118, 233.777 ], "x_axis": [ -0.605, -0.497, 0.622 ], "y_axis": [ -0.788, 0.261, -0.557 ], "z_axis": [ 0.115, -0.827, -0.550 ], "quaternion": [ -0.163, -0.414, 0.777, -0.445 ] } }, { "index": 1275, "index_chain": 1275, "chain_name": "a", "nt_resnum": 1276, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1276", "linked_nts": [ "///a/1275", "///a/1277" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix-end,stem-end,multiplet", "alpha": -108.294, "beta": 176.603, "gamma": 59.375, "delta": 80.117, "epsilon": -132.342, "zeta": -88.849, "epsilon_zeta": -43.493, "bb_type": "BI", "chi": -156.759, "glyco_bond": "anti", "C5prime_xyz": [ -1.516, 8.862, 0.296 ], "P_xyz": [ 1.021, 9.487, 0.347 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 126.774, "theta": -148.899, "eta_prime": 167.809, "theta_prime": -145.561, "eta_base": -157.707, "theta_base": -115.781, "v0": -1.982, "v1": -20.918, "v2": 34.507, "v3": -36.590, "v4": 24.356, "amplitude": 37.109, "phase_angle": 21.582, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.130, "filter_rmsd": 0.066, "frame": { "rmsd": 0.009, "origin": [ 335.175, 182.747, 228.340 ], "x_axis": [ 0.005, 0.733, 0.680 ], "y_axis": [ 0.838, 0.368, -0.403 ], "z_axis": [ -0.546, 0.572, -0.612 ], "quaternion": [ -0.436, 0.559, 0.703, 0.060 ] } }, { "index": 1276, "index_chain": 1276, "chain_name": "a", "nt_resnum": 1277, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1277", "linked_nts": [ "///a/1276", "///a/1278" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -58.892, "beta": 153.434, "gamma": 58.284, "delta": 82.234, "epsilon": -147.007, "zeta": -78.218, "epsilon_zeta": -68.789, "bb_type": "BI", "chi": -153.930, "glyco_bond": "anti", "C5prime_xyz": [ -1.547, 8.833, 0.130 ], "P_xyz": [ 0.992, 9.173, -0.353 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.792, "theta": -144.037, "eta_prime": 179.290, "theta_prime": -145.061, "eta_base": -139.283, "theta_base": -123.242, "v0": -0.706, "v1": -21.608, "v2": 34.415, "v3": -35.710, "v4": 22.957, "amplitude": 36.537, "phase_angle": 19.624, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.608, "filter_rmsd": 0.063, "frame": { "rmsd": 0.009, "origin": [ 333.080, 185.218, 227.363 ], "x_axis": [ 0.552, 0.680, 0.483 ], "y_axis": [ 0.618, 0.055, -0.784 ], "z_axis": [ -0.559, 0.732, -0.390 ], "quaternion": [ 0.551, -0.687, -0.472, 0.028 ] } }, { "index": 1277, "index_chain": 1277, "chain_name": "a", "nt_resnum": 1278, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1278", "linked_nts": [ "///a/1277", "///a/1279" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -59.487, "beta": 162.552, "gamma": 67.996, "delta": 80.423, "epsilon": -107.878, "zeta": 6.090, "epsilon_zeta": 246.032, "bb_type": "--", "chi": -151.959, "glyco_bond": "anti", "C5prime_xyz": [ -1.703, 8.889, 0.006 ], "P_xyz": [ 0.770, 9.488, -0.617 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -171.676, "theta": -30.268, "eta_prime": -160.729, "theta_prime": -67.327, "eta_base": -130.168, "theta_base": -108.844, "v0": -2.465, "v1": -20.514, "v2": 34.376, "v3": -36.730, "v4": 24.720, "amplitude": 37.156, "phase_angle": 22.305, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.613, "filter_rmsd": 0.062, "frame": { "rmsd": 0.008, "origin": [ 330.839, 189.211, 226.992 ], "x_axis": [ 0.768, 0.640, 0.010 ], "y_axis": [ 0.230, -0.261, -0.938 ], "z_axis": [ -0.598, 0.723, -0.347 ], "quaternion": [ 0.539, -0.771, -0.282, 0.190 ] } }, { "index": 1278, "index_chain": 1278, "chain_name": "a", "nt_resnum": 1279, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1279", "linked_nts": [ "///a/1278", "///a/1280" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": 168.880, "beta": 145.261, "gamma": 76.030, "delta": 147.499, "epsilon": -99.724, "zeta": 120.426, "epsilon_zeta": 139.850, "bb_type": "--", "chi": -138.997, "glyco_bond": "anti", "C5prime_xyz": [ -2.209, 8.716, -0.223 ], "P_xyz": [ 0.366, 9.140, -0.033 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 58.503, "theta": 143.224, "eta_prime": 119.247, "theta_prime": 85.782, "eta_base": 112.040, "theta_base": 56.800, "v0": -24.358, "v1": 38.517, "v2": -37.180, "v3": 24.095, "v4": -0.082, "amplitude": 39.249, "phase_angle": 161.315, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.038, "frame": { "rmsd": 0.010, "origin": [ 330.189, 192.941, 225.073 ], "x_axis": [ -0.784, -0.462, 0.415 ], "y_axis": [ -0.133, -0.527, -0.839 ], "z_axis": [ 0.607, -0.713, 0.352 ], "quaternion": [ -0.101, 0.313, -0.476, 0.816 ] } }, { "index": 1279, "index_chain": 1279, "chain_name": "a", "nt_resnum": 1280, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1280", "linked_nts": [ "///a/1279", "///a/1281" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI,non-stack", "alpha": 41.770, "beta": -166.933, "gamma": 165.158, "delta": 80.834, "epsilon": -135.802, "zeta": -41.756, "epsilon_zeta": -94.046, "bb_type": "BI", "chi": -159.508, "glyco_bond": "anti", "C5prime_xyz": [ -1.437, 8.753, 0.485 ], "P_xyz": [ -0.027, 10.137, -1.245 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 92.391, "theta": -126.222, "eta_prime": 78.170, "theta_prime": -133.728, "eta_base": 71.787, "theta_base": -145.924, "v0": 2.087, "v1": -24.404, "v2": 36.161, "v3": -35.906, "v4": 21.313, "amplitude": 37.514, "phase_angle": 15.435, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "6n", "suiteness": 0.163, "filter_rmsd": 0.110, "frame": { "rmsd": 0.008, "origin": [ 325.164, 194.757, 214.521 ], "x_axis": [ -0.359, -0.627, 0.691 ], "y_axis": [ 0.933, -0.228, 0.278 ], "z_axis": [ -0.016, 0.745, 0.667 ], "quaternion": [ 0.519, -0.225, -0.341, -0.751 ] } }, { "index": 1280, "index_chain": 1280, "chain_name": "a", "nt_resnum": 1281, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1281", "linked_nts": [ "///a/1280", "///a/1282" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -88.973, "beta": -178.228, "gamma": -176.522, "delta": 80.816, "epsilon": -118.766, "zeta": -94.811, "epsilon_zeta": -23.955, "bb_type": "--", "chi": -148.177, "glyco_bond": "anti", "C5prime_xyz": [ -1.416, 8.699, -0.195 ], "P_xyz": [ -0.775, 10.329, -2.150 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -78.973, "theta": -179.431, "eta_prime": -61.020, "theta_prime": -169.778, "eta_base": -51.820, "theta_base": -131.573, "v0": 2.907, "v1": -25.542, "v2": 37.172, "v3": -36.466, "v4": 21.233, "amplitude": 38.367, "phase_angle": 14.342, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.015, "origin": [ 326.173, 203.600, 223.447 ], "x_axis": [ 0.651, 0.736, 0.187 ], "y_axis": [ 0.622, -0.375, -0.687 ], "z_axis": [ -0.436, 0.564, -0.702 ], "quaternion": [ -0.379, 0.826, 0.411, -0.075 ] } }, { "index": 1281, "index_chain": 1281, "chain_name": "a", "nt_resnum": 1282, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1282", "linked_nts": [ "///a/1281", "///a/1283" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -66.263, "beta": 152.260, "gamma": 56.725, "delta": 85.161, "epsilon": -150.574, "zeta": -70.148, "epsilon_zeta": -80.426, "bb_type": "BI", "chi": -161.323, "glyco_bond": "anti", "C5prime_xyz": [ -1.230, 8.558, 0.639 ], "P_xyz": [ 1.376, 8.554, 0.282 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.921, "theta": -136.779, "eta_prime": 170.513, "theta_prime": -142.629, "eta_base": -143.480, "theta_base": -126.155, "v0": 5.732, "v1": -25.923, "v2": 35.064, "v3": -32.655, "v4": 17.038, "amplitude": 35.551, "phase_angle": 9.489, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.332, "filter_rmsd": 0.041, "frame": { "rmsd": 0.021, "origin": [ 326.339, 206.646, 220.913 ], "x_axis": [ 0.982, -0.069, 0.177 ], "y_axis": [ 0.087, -0.666, -0.741 ], "z_axis": [ 0.169, 0.743, -0.648 ], "quaternion": [ -0.408, 0.908, 0.005, 0.095 ] } }, { "index": 1282, "index_chain": 1282, "chain_name": "a", "nt_resnum": 1283, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1283", "linked_nts": [ "///a/1282", "///a/1284" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -72.104, "beta": 167.247, "gamma": 63.982, "delta": 80.445, "epsilon": -140.537, "zeta": -41.393, "epsilon_zeta": -99.144, "bb_type": "BI", "chi": -172.451, "glyco_bond": "anti", "C5prime_xyz": [ -1.712, 8.638, 1.192 ], "P_xyz": [ 0.824, 9.261, 1.432 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.524, "theta": -107.593, "eta_prime": -177.805, "theta_prime": -103.981, "eta_base": -140.463, "theta_base": -66.628, "v0": -1.843, "v1": -21.301, "v2": 34.998, "v3": -36.923, "v4": 24.466, "amplitude": 37.557, "phase_angle": 21.269, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.769, "filter_rmsd": 0.042, "frame": { "rmsd": 0.012, "origin": [ 327.477, 210.046, 220.109 ], "x_axis": [ 0.851, -0.516, -0.094 ], "y_axis": [ -0.412, -0.547, -0.728 ], "z_axis": [ 0.324, 0.659, -0.679 ], "quaternion": [ -0.395, 0.877, -0.265, 0.065 ] } }, { "index": 1283, "index_chain": 1283, "chain_name": "a", "nt_resnum": 1284, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1284", "linked_nts": [ "///a/1283", "///a/1285" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -87.458, "beta": -173.445, "gamma": 67.682, "delta": 78.075, "epsilon": -125.970, "zeta": -75.203, "epsilon_zeta": -50.767, "bb_type": "--", "chi": -171.202, "glyco_bond": "anti", "C5prime_xyz": [ -1.350, 8.507, 1.181 ], "P_xyz": [ 1.240, 8.819, 1.426 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.881, "theta": -130.628, "eta_prime": -162.755, "theta_prime": -125.451, "eta_base": -98.110, "theta_base": -82.218, "v0": 5.429, "v1": -28.683, "v2": 39.960, "v3": -37.825, "v4": 20.407, "amplitude": 40.721, "phase_angle": 11.096, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.224, "filter_rmsd": 0.037, "frame": { "rmsd": 0.007, "origin": [ 332.047, 209.412, 213.433 ], "x_axis": [ -0.223, -0.734, -0.642 ], "y_axis": [ -0.974, 0.202, 0.107 ], "z_axis": [ 0.051, 0.649, -0.759 ], "quaternion": [ 0.234, -0.578, 0.739, 0.256 ] } }, { "index": 1284, "index_chain": 1284, "chain_name": "a", "nt_resnum": 1285, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1285", "linked_nts": [ "///a/1284", "///a/1286" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end", "alpha": -55.551, "beta": 158.522, "gamma": 64.450, "delta": 80.062, "epsilon": -130.359, "zeta": -72.609, "epsilon_zeta": -57.750, "bb_type": "BI", "chi": -157.629, "glyco_bond": "anti", "C5prime_xyz": [ -1.510, 8.862, 0.348 ], "P_xyz": [ 1.017, 9.340, -0.106 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.753, "theta": -130.394, "eta_prime": -166.020, "theta_prime": -130.414, "eta_base": -106.552, "theta_base": -103.862, "v0": -2.320, "v1": -20.713, "v2": 34.534, "v3": -36.831, "v4": 24.709, "amplitude": 37.271, "phase_angle": 22.095, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.561, "filter_rmsd": 0.062, "frame": { "rmsd": 0.007, "origin": [ 331.907, 208.628, 209.461 ], "x_axis": [ -0.843, -0.390, -0.370 ], "y_axis": [ -0.511, 0.796, 0.326 ], "z_axis": [ 0.168, 0.464, -0.870 ], "quaternion": [ 0.144, -0.240, 0.937, 0.211 ] } }, { "index": 1285, "index_chain": 1285, "chain_name": "a", "nt_resnum": 1286, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1286", "linked_nts": [ "///a/1285", "///a/1287" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -59.849, "beta": -178.994, "gamma": 41.074, "delta": 76.337, "epsilon": -148.330, "zeta": -75.487, "epsilon_zeta": -72.843, "bb_type": "BI", "chi": -158.433, "glyco_bond": "anti", "C5prime_xyz": [ -1.595, 8.869, 0.389 ], "P_xyz": [ 0.813, 9.707, 0.953 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.289, "theta": -154.850, "eta_prime": 175.452, "theta_prime": -151.550, "eta_base": -142.389, "theta_base": -124.404, "v0": -0.921, "v1": -23.554, "v2": 37.760, "v3": -39.287, "v4": 25.316, "amplitude": 40.147, "phase_angle": 19.857, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.617, "filter_rmsd": 0.063, "frame": { "rmsd": 0.007, "origin": [ 330.190, 209.623, 204.202 ], "x_axis": [ -0.921, -0.072, 0.382 ], "y_axis": [ 0.174, 0.802, 0.571 ], "z_axis": [ -0.348, 0.592, -0.727 ], "quaternion": [ -0.197, 0.027, 0.929, 0.313 ] } }, { "index": 1286, "index_chain": 1286, "chain_name": "a", "nt_resnum": 1287, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1287", "linked_nts": [ "///a/1286", "///a/1288" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -72.467, "beta": 172.047, "gamma": 56.987, "delta": 79.342, "epsilon": -149.611, "zeta": -72.306, "epsilon_zeta": -77.304, "bb_type": "BI", "chi": -166.186, "glyco_bond": "anti", "C5prime_xyz": [ -1.544, 8.704, 0.857 ], "P_xyz": [ 1.014, 9.262, 0.973 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.461, "theta": -147.796, "eta_prime": 171.205, "theta_prime": -148.022, "eta_base": -150.609, "theta_base": -118.114, "v0": 2.134, "v1": -25.305, "v2": 37.581, "v3": -37.333, "v4": 22.180, "amplitude": 38.999, "phase_angle": 15.499, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.881, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 328.104, 210.318, 201.650 ], "x_axis": [ -0.544, 0.145, 0.826 ], "y_axis": [ 0.576, 0.780, 0.243 ], "z_axis": [ -0.610, 0.608, -0.508 ], "quaternion": [ -0.427, 0.214, 0.842, 0.253 ] } }, { "index": 1287, "index_chain": 1287, "chain_name": "a", "nt_resnum": 1288, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1288", "linked_nts": [ "///a/1287", "///a/1289" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -75.718, "beta": 164.606, "gamma": 70.689, "delta": 79.389, "epsilon": -113.355, "zeta": -108.503, "epsilon_zeta": -4.852, "bb_type": "--", "chi": -170.615, "glyco_bond": "anti", "C5prime_xyz": [ -1.379, 8.557, 1.122 ], "P_xyz": [ 1.170, 9.045, 0.808 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.868, "theta": -153.780, "eta_prime": -175.328, "theta_prime": -149.665, "eta_base": -132.446, "theta_base": -121.757, "v0": 3.748, "v1": -26.579, "v2": 38.074, "v3": -36.912, "v4": 20.940, "amplitude": 39.110, "phase_angle": 13.218, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.489, "filter_rmsd": 0.039, "frame": { "rmsd": 0.010, "origin": [ 324.884, 211.251, 200.791 ], "x_axis": [ -0.117, 0.550, 0.827 ], "y_axis": [ 0.723, 0.618, -0.308 ], "z_axis": [ -0.680, 0.562, -0.470 ], "quaternion": [ 0.508, -0.429, -0.742, -0.085 ] } }, { "index": 1288, "index_chain": 1288, "chain_name": "a", "nt_resnum": 1289, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1289", "linked_nts": [ "///a/1288", "///a/1290" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem", "alpha": -55.092, "beta": 127.651, "gamma": 69.450, "delta": 84.690, "epsilon": -137.842, "zeta": -69.561, "epsilon_zeta": -68.281, "bb_type": "BI", "chi": -153.555, "glyco_bond": "anti", "C5prime_xyz": [ -1.524, 8.763, 0.132 ], "P_xyz": [ 0.822, 8.605, -1.037 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.323, "theta": -123.615, "eta_prime": -178.207, "theta_prime": -132.093, "eta_base": -138.312, "theta_base": -102.511, "v0": 0.732, "v1": -21.746, "v2": 33.225, "v3": -33.732, "v4": 20.844, "amplitude": 34.824, "phase_angle": 17.427, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.669, "filter_rmsd": 0.107, "frame": { "rmsd": 0.008, "origin": [ 322.952, 212.404, 200.420 ], "x_axis": [ 0.226, 0.775, 0.590 ], "y_axis": [ 0.371, 0.492, -0.788 ], "z_axis": [ -0.901, 0.397, -0.176 ], "quaternion": [ 0.621, -0.477, -0.601, 0.163 ] } }, { "index": 1289, "index_chain": 1289, "chain_name": "a", "nt_resnum": 1290, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1290", "linked_nts": [ "///a/1289", "///a/1291" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end,stem-end", "alpha": -65.558, "beta": 176.207, "gamma": 48.396, "delta": 84.254, "epsilon": -99.155, "zeta": -98.640, "epsilon_zeta": -0.515, "bb_type": "--", "chi": -151.788, "glyco_bond": "anti", "C5prime_xyz": [ -1.476, 8.846, 0.023 ], "P_xyz": [ 1.064, 9.442, 0.295 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.851, "theta": -127.256, "eta_prime": -170.206, "theta_prime": -112.429, "eta_base": -126.007, "theta_base": -86.024, "v0": -1.399, "v1": -19.893, "v2": 32.293, "v3": -33.998, "v4": 22.417, "amplitude": 34.564, "phase_angle": 20.884, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.884, "filter_rmsd": 0.062, "frame": { "rmsd": 0.006, "origin": [ 320.475, 216.005, 201.192 ], "x_axis": [ 0.772, 0.634, -0.046 ], "y_axis": [ 0.046, -0.128, -0.991 ], "z_axis": [ -0.635, 0.762, -0.128 ], "quaternion": [ 0.615, -0.712, -0.239, 0.239 ] } }, { "index": 1290, "index_chain": 1290, "chain_name": "a", "nt_resnum": 1291, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1291", "linked_nts": [ "///a/1290", "///a/1292" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -78.404, "beta": 161.775, "gamma": 81.246, "delta": 150.825, "epsilon": -68.250, "zeta": 98.906, "epsilon_zeta": 192.844, "bb_type": "--", "chi": -129.324, "glyco_bond": "anti", "C5prime_xyz": [ -1.675, 8.631, -0.642 ], "P_xyz": [ 0.953, 8.714, -0.525 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -154.690, "theta": 126.305, "eta_prime": -131.966, "theta_prime": 119.551, "eta_base": -114.698, "theta_base": 142.650, "v0": -18.790, "v1": 34.663, "v2": -36.429, "v3": 26.537, "v4": -5.091, "amplitude": 37.113, "phase_angle": 168.985, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.010, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 319.915, 221.130, 198.268 ], "x_axis": [ 0.860, -0.454, -0.232 ], "y_axis": [ -0.463, -0.504, -0.729 ], "z_axis": [ 0.215, 0.735, -0.644 ], "quaternion": [ -0.422, 0.867, -0.264, -0.005 ] } }, { "index": 1291, "index_chain": 1291, "chain_name": "a", "nt_resnum": 1292, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1292", "linked_nts": [ "///a/1291", "///a/1293" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix-end", "alpha": -171.431, "beta": -137.723, "gamma": 68.593, "delta": 91.825, "epsilon": -70.175, "zeta": 86.247, "epsilon_zeta": 203.578, "bb_type": "--", "chi": -163.766, "glyco_bond": "anti", "C5prime_xyz": [ -1.419, 8.722, 0.751 ], "P_xyz": [ 0.874, 8.748, 2.052 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -167.050, "theta": 90.807, "eta_prime": 173.818, "theta_prime": 75.061, "eta_base": -179.142, "theta_base": 98.416, "v0": -1.655, "v1": -16.092, "v2": 26.444, "v3": -28.122, "v4": 18.907, "amplitude": 28.486, "phase_angle": 21.824, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "6g", "suiteness": 0.213, "filter_rmsd": 0.105, "frame": { "rmsd": 0.007, "origin": [ 313.926, 221.709, 202.094 ], "x_axis": [ 0.863, 0.229, -0.451 ], "y_axis": [ -0.317, -0.449, -0.835 ], "z_axis": [ -0.394, 0.864, -0.315 ], "quaternion": [ 0.524, -0.810, 0.027, 0.261 ] } }, { "index": 1292, "index_chain": 1292, "chain_name": "a", "nt_resnum": 1293, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1293", "linked_nts": [ "///a/1292", "///a/1294" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BI,non-canonical,helix", "alpha": 169.975, "beta": 163.790, "gamma": 78.408, "delta": 83.853, "epsilon": -131.361, "zeta": -74.928, "epsilon_zeta": -56.433, "bb_type": "BI", "chi": 71.649, "glyco_bond": "syn", "C5prime_xyz": [ -4.899, 4.584, 2.475 ], "P_xyz": [ -4.139, 2.826, 4.278 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 113.439, "theta": -131.531, "eta_prime": 125.663, "theta_prime": -141.073, "eta_base": 170.367, "theta_base": -144.096, "v0": -4.576, "v1": -16.569, "v2": 30.044, "v3": -33.548, "v4": 24.076, "amplitude": 33.503, "phase_angle": 26.266, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.045, "frame": { "rmsd": 0.016, "origin": [ 308.838, 215.181, 199.441 ], "x_axis": [ 0.948, -0.257, 0.189 ], "y_axis": [ 0.148, -0.169, -0.974 ], "z_axis": [ 0.282, 0.951, -0.122 ], "quaternion": [ 0.644, -0.748, 0.036, -0.157 ] } }, { "index": 1293, "index_chain": 1293, "chain_name": "a", "nt_resnum": 1294, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1294", "linked_nts": [ "///a/1293", "///a/1295" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,non-canonical,multiplet", "alpha": -57.223, "beta": 150.255, "gamma": 170.979, "delta": 149.800, "epsilon": -151.995, "zeta": 126.129, "epsilon_zeta": 81.876, "bb_type": "--", "chi": -68.830, "glyco_bond": "--", "C5prime_xyz": [ -3.407, 6.936, -2.888 ], "P_xyz": [ -3.839, 6.217, -5.379 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -46.674, "theta": 57.396, "eta_prime": -42.424, "theta_prime": 69.987, "eta_base": -83.612, "theta_base": 84.569, "v0": -24.109, "v1": 39.042, "v2": -38.027, "v3": 25.177, "v4": -0.826, "amplitude": 39.897, "phase_angle": 162.390, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 300.783, 210.628, 202.199 ], "x_axis": [ -0.964, -0.224, 0.146 ], "y_axis": [ -0.095, -0.220, -0.971 ], "z_axis": [ 0.249, -0.949, 0.191 ], "quaternion": [ -0.042, 0.128, -0.623, 0.770 ] } }, { "index": 1294, "index_chain": 1294, "chain_name": "a", "nt_resnum": 1295, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1295", "linked_nts": [ "///a/1294", "///a/1296" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -48.626, "beta": 141.114, "gamma": 22.055, "delta": 141.730, "epsilon": -103.834, "zeta": -106.349, "epsilon_zeta": 2.516, "bb_type": "--", "chi": -142.086, "glyco_bond": "anti", "C5prime_xyz": [ -2.163, 8.754, -0.189 ], "P_xyz": [ -0.241, 9.411, 1.430 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 179.788, "theta": -83.740, "eta_prime": -174.024, "theta_prime": -129.323, "eta_base": -177.364, "theta_base": -155.942, "v0": -25.786, "v1": 37.415, "v2": -34.110, "v3": 20.164, "v4": 3.231, "amplitude": 37.275, "phase_angle": 156.215, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "4b", "suiteness": 0.010, "filter_rmsd": 0.100, "frame": { "rmsd": 0.011, "origin": [ 308.828, 212.461, 201.363 ], "x_axis": [ -0.875, -0.070, 0.479 ], "y_axis": [ -0.441, -0.293, -0.848 ], "z_axis": [ 0.200, -0.953, 0.226 ], "quaternion": [ 0.120, 0.219, -0.582, 0.774 ] } }, { "index": 1295, "index_chain": 1295, "chain_name": "a", "nt_resnum": 1296, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1296", "linked_nts": [ "///a/1295", "///a/1297" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": -28.364, "beta": 157.684, "gamma": -170.615, "delta": 150.163, "epsilon": -98.232, "zeta": -88.030, "epsilon_zeta": -10.202, "bb_type": "--", "chi": -130.791, "glyco_bond": "anti", "C5prime_xyz": [ -1.339, 8.530, -0.512 ], "P_xyz": [ 0.064, 10.148, -1.972 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 16.021, "theta": -65.912, "eta_prime": 37.185, "theta_prime": -62.106, "eta_base": 43.758, "theta_base": -13.691, "v0": -15.295, "v1": 31.258, "v2": -34.381, "v3": 26.467, "v4": -7.209, "amplitude": 34.635, "phase_angle": 173.062, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.062, "frame": { "rmsd": 0.006, "origin": [ 321.437, 208.683, 193.092 ], "x_axis": [ 0.127, 0.799, -0.588 ], "y_axis": [ -0.976, 0.207, 0.069 ], "z_axis": [ 0.177, 0.565, 0.806 ], "quaternion": [ 0.731, -0.170, 0.261, 0.607 ] } }, { "index": 1296, "index_chain": 1296, "chain_name": "a", "nt_resnum": 1297, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1297", "linked_nts": [ "///a/1296", "///a/1298" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix", "alpha": 81.893, "beta": 114.711, "gamma": 10.334, "delta": 76.562, "epsilon": -140.618, "zeta": -65.337, "epsilon_zeta": -75.280, "bb_type": "BI", "chi": -154.648, "glyco_bond": "anti", "C5prime_xyz": [ -1.812, 8.945, 0.148 ], "P_xyz": [ 0.697, 9.122, 0.915 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -164.024, "theta": -124.979, "eta_prime": -128.761, "theta_prime": -120.103, "eta_base": -150.516, "theta_base": -64.779, "v0": -3.159, "v1": -21.580, "v2": 36.663, "v3": -39.421, "v4": 26.846, "amplitude": 39.823, "phase_angle": 22.979, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.061, "frame": { "rmsd": 0.010, "origin": [ 303.442, 207.212, 199.301 ], "x_axis": [ -0.100, -0.569, -0.816 ], "y_axis": [ 0.986, 0.053, -0.158 ], "z_axis": [ 0.133, -0.821, 0.555 ], "quaternion": [ 0.614, 0.270, 0.387, -0.633 ] } }, { "index": 1297, "index_chain": 1297, "chain_name": "a", "nt_resnum": 1298, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1298", "linked_nts": [ "///a/1297", "///a/1299" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -67.877, "beta": 166.035, "gamma": 61.906, "delta": 85.044, "epsilon": -96.983, "zeta": -141.917, "epsilon_zeta": 44.934, "bb_type": "--", "chi": -152.284, "glyco_bond": "anti", "C5prime_xyz": [ -1.125, 8.738, 0.086 ], "P_xyz": [ 1.475, 8.821, -0.323 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 179.199, "theta": -123.899, "eta_prime": -161.672, "theta_prime": -123.777, "eta_base": -94.427, "theta_base": -84.569, "v0": 2.872, "v1": -23.201, "v2": 33.664, "v3": -32.864, "v4": 18.975, "amplitude": 34.689, "phase_angle": 13.966, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.796, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 305.274, 203.047, 197.203 ], "x_axis": [ 0.767, -0.102, -0.634 ], "y_axis": [ 0.634, 0.279, 0.722 ], "z_axis": [ 0.103, -0.955, 0.279 ], "quaternion": [ 0.762, 0.550, 0.242, -0.241 ] } }, { "index": 1298, "index_chain": 1298, "chain_name": "a", "nt_resnum": 1299, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1299", "linked_nts": [ "///a/1298", "///a/1300" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": 102.812, "beta": -90.980, "gamma": 177.534, "delta": 84.869, "epsilon": 172.835, "zeta": -95.611, "epsilon_zeta": -91.554, "bb_type": "BI", "chi": -149.107, "glyco_bond": "anti", "C5prime_xyz": [ -1.160, 8.677, -0.058 ], "P_xyz": [ -0.350, 8.390, -2.537 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 149.470, "theta": 160.753, "eta_prime": -166.023, "theta_prime": 136.155, "eta_base": -109.876, "theta_base": 135.912, "v0": 6.602, "v1": -26.792, "v2": 35.577, "v3": -32.734, "v4": 16.630, "amplitude": 35.954, "phase_angle": 8.298, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 308.236, 200.575, 197.444 ], "x_axis": [ 0.971, 0.093, -0.220 ], "y_axis": [ 0.228, -0.094, 0.969 ], "z_axis": [ 0.069, -0.991, -0.113 ], "quaternion": [ 0.664, 0.738, 0.109, -0.051 ] } }, { "index": 1299, "index_chain": 1299, "chain_name": "a", "nt_resnum": 1300, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1300", "linked_nts": [ "///a/1299", "///a/1301" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -72.833, "beta": -179.030, "gamma": 61.234, "delta": 83.462, "epsilon": -144.030, "zeta": -57.735, "epsilon_zeta": -86.295, "bb_type": "BI", "chi": -166.070, "glyco_bond": "anti", "C5prime_xyz": [ -1.102, 8.551, 0.865 ], "P_xyz": [ 1.494, 8.755, 1.080 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.507, "theta": -126.048, "eta_prime": 170.784, "theta_prime": -123.826, "eta_base": 167.983, "theta_base": -80.314, "v0": 4.976, "v1": -25.975, "v2": 35.915, "v3": -33.972, "v4": 18.361, "amplitude": 36.581, "phase_angle": 10.949, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "&a", "suiteness": 0.684, "filter_rmsd": 0.041, "frame": { "rmsd": 0.016, "origin": [ 301.656, 196.775, 197.840 ], "x_axis": [ 0.895, 0.090, -0.437 ], "y_axis": [ 0.441, -0.028, 0.897 ], "z_axis": [ 0.068, -0.996, -0.065 ], "quaternion": [ 0.671, 0.705, 0.188, -0.131 ] } }, { "index": 1300, "index_chain": 1300, "chain_name": "a", "nt_resnum": 1301, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1301", "linked_nts": [ "///a/1300", "///a/1302" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -76.840, "beta": 167.627, "gamma": 70.094, "delta": 82.273, "epsilon": -125.773, "zeta": -80.779, "epsilon_zeta": -44.994, "bb_type": "--", "chi": -158.946, "glyco_bond": "anti", "C5prime_xyz": [ -1.571, 8.781, 0.463 ], "P_xyz": [ 0.980, 9.314, 0.194 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.618, "theta": -132.791, "eta_prime": -166.385, "theta_prime": -130.118, "eta_base": -103.754, "theta_base": -83.464, "v0": -1.238, "v1": -20.449, "v2": 33.125, "v3": -34.774, "v4": 22.761, "amplitude": 35.388, "phase_angle": 20.602, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.480, "filter_rmsd": 0.106, "frame": { "rmsd": 0.010, "origin": [ 304.372, 194.505, 196.193 ], "x_axis": [ 0.941, 0.078, 0.329 ], "y_axis": [ -0.296, -0.281, 0.913 ], "z_axis": [ 0.163, -0.957, -0.241 ], "quaternion": [ 0.596, 0.785, -0.070, 0.157 ] } }, { "index": 1301, "index_chain": 1301, "chain_name": "a", "nt_resnum": 1302, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1302", "linked_nts": [ "///a/1301", "///a/1303" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -55.671, "beta": 154.423, "gamma": 54.793, "delta": 82.204, "epsilon": -151.593, "zeta": -91.542, "epsilon_zeta": -60.051, "bb_type": "BI", "chi": -155.030, "glyco_bond": "anti", "C5prime_xyz": [ -1.370, 8.816, 0.241 ], "P_xyz": [ 1.219, 9.047, -0.038 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.309, "theta": -160.100, "eta_prime": -176.350, "theta_prime": -163.231, "eta_base": -112.384, "theta_base": -156.602, "v0": 0.276, "v1": -22.087, "v2": 34.256, "v3": -35.027, "v4": 21.975, "amplitude": 36.058, "phase_angle": 18.188, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.599, "filter_rmsd": 0.064, "frame": { "rmsd": 0.007, "origin": [ 307.341, 191.484, 197.267 ], "x_axis": [ 0.326, 0.086, 0.942 ], "y_axis": [ -0.857, -0.393, 0.332 ], "z_axis": [ 0.398, -0.916, -0.055 ], "quaternion": [ 0.469, 0.666, -0.290, 0.503 ] } }, { "index": 1302, "index_chain": 1302, "chain_name": "a", "nt_resnum": 1303, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1303", "linked_nts": [ "///a/1302", "///a/1304" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -52.670, "beta": 168.487, "gamma": 45.785, "delta": 79.038, "epsilon": -147.426, "zeta": -66.454, "epsilon_zeta": -80.973, "bb_type": "BI", "chi": -165.317, "glyco_bond": "anti", "C5prime_xyz": [ -1.338, 8.794, 0.799 ], "P_xyz": [ 1.197, 9.285, 1.211 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.343, "theta": -140.742, "eta_prime": 175.512, "theta_prime": -137.740, "eta_base": -169.167, "theta_base": -97.683, "v0": 0.035, "v1": -23.458, "v2": 36.670, "v3": -37.575, "v4": 23.696, "amplitude": 38.670, "phase_angle": 18.507, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.613, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 310.065, 187.825, 194.854 ], "x_axis": [ 0.014, 0.192, 0.981 ], "y_axis": [ -0.959, -0.275, 0.067 ], "z_axis": [ 0.283, -0.942, 0.181 ], "quaternion": [ 0.479, 0.526, -0.364, 0.600 ] } }, { "index": 1303, "index_chain": 1303, "chain_name": "a", "nt_resnum": 1304, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1304", "linked_nts": [ "///a/1303", "///a/1305" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -72.717, "beta": 167.834, "gamma": 65.859, "delta": 79.292, "epsilon": -145.870, "zeta": -72.998, "epsilon_zeta": -72.872, "bb_type": "BI", "chi": -158.729, "glyco_bond": "anti", "C5prime_xyz": [ -1.461, 8.847, 0.433 ], "P_xyz": [ 1.092, 9.337, 0.091 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.018, "theta": -144.177, "eta_prime": -174.899, "theta_prime": -145.408, "eta_base": -118.527, "theta_base": -124.471, "v0": -0.105, "v1": -23.088, "v2": 36.265, "v3": -37.188, "v4": 23.563, "amplitude": 38.285, "phase_angle": 18.695, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.703, "filter_rmsd": 0.063, "frame": { "rmsd": 0.006, "origin": [ 311.623, 185.905, 197.244 ], "x_axis": [ -0.582, -0.024, 0.813 ], "y_axis": [ -0.695, -0.506, -0.512 ], "z_axis": [ 0.423, -0.862, 0.278 ], "quaternion": [ 0.218, 0.402, -0.447, 0.769 ] } }, { "index": 1304, "index_chain": 1304, "chain_name": "a", "nt_resnum": 1305, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1305", "linked_nts": [ "///a/1304", "///a/1306" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -64.396, "beta": 168.866, "gamma": 60.476, "delta": 76.927, "epsilon": -159.436, "zeta": -82.246, "epsilon_zeta": -77.191, "bb_type": "BI", "chi": -168.741, "glyco_bond": "anti", "C5prime_xyz": [ -1.746, 8.713, 0.984 ], "P_xyz": [ 0.740, 9.488, 1.136 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.280, "theta": -132.524, "eta_prime": -176.745, "theta_prime": -141.966, "eta_base": -138.709, "theta_base": -120.824, "v0": -1.340, "v1": -22.936, "v2": 37.158, "v3": -38.991, "v4": 25.409, "amplitude": 39.676, "phase_angle": 20.520, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.877, "filter_rmsd": 0.039, "frame": { "rmsd": 0.008, "origin": [ 313.551, 182.962, 200.056 ], "x_axis": [ -0.916, -0.071, 0.394 ], "y_axis": [ -0.344, -0.363, -0.866 ], "z_axis": [ 0.204, -0.929, 0.308 ], "quaternion": [ 0.085, 0.186, -0.558, 0.804 ] } }, { "index": 1305, "index_chain": 1305, "chain_name": "a", "nt_resnum": 1306, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1306", "linked_nts": [ "///a/1305", "///a/1307" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem,multiplet", "alpha": 147.634, "beta": -155.508, "gamma": -174.999, "delta": 82.256, "epsilon": -123.949, "zeta": -97.783, "epsilon_zeta": -26.166, "bb_type": "--", "chi": -175.144, "glyco_bond": "anti", "C5prime_xyz": [ -1.205, 8.470, 1.440 ], "P_xyz": [ 0.321, 10.252, 0.280 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.681, "theta": -178.702, "eta_prime": -178.476, "theta_prime": -172.153, "eta_base": -138.798, "theta_base": -162.390, "v0": 4.753, "v1": -26.283, "v2": 36.645, "v3": -34.926, "v4": 19.060, "amplitude": 37.396, "phase_angle": 11.502, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.798, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 313.597, 181.241, 203.559 ], "x_axis": [ -0.952, -0.298, -0.062 ], "y_axis": [ 0.189, -0.417, -0.889 ], "z_axis": [ 0.239, -0.859, 0.453 ], "quaternion": [ -0.145, 0.053, -0.520, 0.840 ] } }, { "index": 1306, "index_chain": 1306, "chain_name": "a", "nt_resnum": 1307, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1307", "linked_nts": [ "///a/1306", "///a/1308" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -60.207, "beta": 145.374, "gamma": 66.327, "delta": 80.191, "epsilon": -144.900, "zeta": -72.491, "epsilon_zeta": -72.409, "bb_type": "BI", "chi": -155.275, "glyco_bond": "anti", "C5prime_xyz": [ -1.708, 8.809, 0.219 ], "P_xyz": [ 0.715, 9.193, -0.669 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.739, "theta": -138.678, "eta_prime": 179.806, "theta_prime": -141.951, "eta_base": -163.510, "theta_base": -109.112, "v0": -0.593, "v1": -22.744, "v2": 36.058, "v3": -37.346, "v4": 23.891, "amplitude": 38.229, "phase_angle": 19.402, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.889, "filter_rmsd": 0.103, "frame": { "rmsd": 0.008, "origin": [ 314.413, 180.172, 206.258 ], "x_axis": [ -0.820, -0.484, -0.304 ], "y_axis": [ 0.555, -0.547, -0.627 ], "z_axis": [ 0.138, -0.683, 0.717 ], "quaternion": [ -0.296, -0.047, -0.373, 0.878 ] } }, { "index": 1307, "index_chain": 1307, "chain_name": "a", "nt_resnum": 1308, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1308", "linked_nts": [ "///a/1307", "///a/1309" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -64.356, "beta": -175.390, "gamma": 45.369, "delta": 81.908, "epsilon": -153.782, "zeta": -79.087, "epsilon_zeta": -74.695, "bb_type": "BI", "chi": -174.275, "glyco_bond": "anti", "C5prime_xyz": [ -1.177, 8.578, 1.397 ], "P_xyz": [ 1.165, 8.677, 2.590 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.453, "theta": -155.356, "eta_prime": 179.353, "theta_prime": -152.378, "eta_base": -131.784, "theta_base": -165.239, "v0": 2.268, "v1": -24.065, "v2": 35.534, "v3": -35.091, "v4": 20.728, "amplitude": 36.803, "phase_angle": 15.089, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.848, "filter_rmsd": 0.072, "frame": { "rmsd": 0.014, "origin": [ 313.007, 175.497, 208.638 ], "x_axis": [ -0.245, -0.128, -0.961 ], "y_axis": [ 0.945, 0.190, -0.266 ], "z_axis": [ 0.217, -0.973, 0.074 ], "quaternion": [ 0.505, 0.350, 0.583, -0.531 ] } }, { "index": 1308, "index_chain": 1308, "chain_name": "a", "nt_resnum": 1309, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1309", "linked_nts": [ "///a/1308", "///a/1310" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -62.679, "beta": 167.413, "gamma": 58.291, "delta": 83.693, "epsilon": -137.494, "zeta": -67.565, "epsilon_zeta": -69.928, "bb_type": "BI", "chi": -144.778, "glyco_bond": "anti", "C5prime_xyz": [ -1.861, 8.788, -0.410 ], "P_xyz": [ 0.647, 9.458, -0.795 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.612, "theta": -128.919, "eta_prime": -175.914, "theta_prime": -128.486, "eta_base": 178.012, "theta_base": -80.476, "v0": -3.696, "v1": -17.801, "v2": 31.160, "v3": -34.139, "v4": 23.867, "amplitude": 34.270, "phase_angle": 24.597, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.902, "filter_rmsd": 0.100, "frame": { "rmsd": 0.011, "origin": [ 311.637, 174.376, 210.716 ], "x_axis": [ 0.010, -0.308, -0.951 ], "y_axis": [ 0.971, -0.226, 0.083 ], "z_axis": [ -0.241, -0.924, 0.296 ], "quaternion": [ 0.520, 0.485, 0.342, -0.615 ] } }, { "index": 1309, "index_chain": 1309, "chain_name": "a", "nt_resnum": 1310, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1310", "linked_nts": [ "///a/1309", "///a/1311" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -78.621, "beta": 166.307, "gamma": 60.521, "delta": 81.407, "epsilon": -133.589, "zeta": -86.550, "epsilon_zeta": -47.039, "bb_type": "BI", "chi": -150.864, "glyco_bond": "anti", "C5prime_xyz": [ -1.479, 8.721, -0.020 ], "P_xyz": [ 1.057, 9.051, -0.559 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.160, "theta": -113.676, "eta_prime": 176.734, "theta_prime": -153.721, "eta_base": -119.614, "theta_base": 156.137, "v0": 2.552, "v1": -25.125, "v2": 36.916, "v3": -36.420, "v4": 21.302, "amplitude": 38.185, "phase_angle": 14.812, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.758, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 312.708, 170.421, 208.538 ], "x_axis": [ 0.808, 0.042, -0.587 ], "y_axis": [ 0.587, -0.123, 0.800 ], "z_axis": [ -0.038, -0.992, -0.124 ], "quaternion": [ 0.625, 0.717, 0.219, -0.218 ] } }, { "index": 1310, "index_chain": 1310, "chain_name": "a", "nt_resnum": 1311, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1311", "linked_nts": [ "///a/1310", "///a/1312" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI,non-canonical", "alpha": 160.100, "beta": -174.371, "gamma": 55.888, "delta": 81.780, "epsilon": -145.970, "zeta": -56.860, "epsilon_zeta": -89.111, "bb_type": "BI", "chi": -154.933, "glyco_bond": "anti", "C5prime_xyz": [ -1.820, 8.962, 0.086 ], "P_xyz": [ 0.504, 10.053, 0.508 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 28.581, "theta": -130.826, "eta_prime": 47.841, "theta_prime": -123.578, "eta_base": 26.683, "theta_base": -80.026, "v0": -8.757, "v1": -13.792, "v2": 29.494, "v3": -35.419, "v4": 27.914, "amplitude": 35.053, "phase_angle": 32.710, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.576, "filter_rmsd": 0.060, "frame": { "rmsd": 0.008, "origin": [ 305.814, 162.807, 214.574 ], "x_axis": [ -0.174, 0.496, 0.851 ], "y_axis": [ 0.978, 0.185, 0.092 ], "z_axis": [ -0.112, 0.848, -0.517 ], "quaternion": [ -0.351, 0.538, 0.685, 0.343 ] } }, { "index": 1311, "index_chain": 1311, "chain_name": "a", "nt_resnum": 1312, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1312", "linked_nts": [ "///a/1311", "///a/1313" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -81.415, "beta": 168.674, "gamma": 74.319, "delta": 82.898, "epsilon": -120.260, "zeta": -81.913, "epsilon_zeta": -38.348, "bb_type": "--", "chi": -171.004, "glyco_bond": "anti", "C5prime_xyz": [ -1.261, 8.486, 1.169 ], "P_xyz": [ 1.320, 8.821, 0.905 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.864, "theta": -127.768, "eta_prime": -161.522, "theta_prime": -124.136, "eta_base": -102.367, "theta_base": -110.646, "v0": 4.200, "v1": -25.515, "v2": 35.936, "v3": -34.512, "v4": 19.151, "amplitude": 36.769, "phase_angle": 12.218, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.287, "filter_rmsd": 0.038, "frame": { "rmsd": 0.014, "origin": [ 307.391, 169.860, 215.424 ], "x_axis": [ 0.798, 0.228, 0.557 ], "y_axis": [ 0.578, -0.550, -0.603 ], "z_axis": [ 0.169, 0.803, -0.571 ], "quaternion": [ -0.411, 0.854, 0.236, 0.212 ] } }, { "index": 1312, "index_chain": 1312, "chain_name": "a", "nt_resnum": 1313, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1313", "linked_nts": [ "///a/1312", "///a/1314" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BII,non-canonical,helix,multiplet", "alpha": -139.070, "beta": 160.661, "gamma": 173.170, "delta": 147.864, "epsilon": -74.948, "zeta": -158.913, "epsilon_zeta": 83.964, "bb_type": "BII", "chi": -106.597, "glyco_bond": "anti", "C5prime_xyz": [ -1.805, 8.111, -1.820 ], "P_xyz": [ -0.708, 8.630, -4.121 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -96.187, "theta": 109.023, "eta_prime": -106.866, "theta_prime": 117.949, "eta_base": -105.977, "theta_base": 96.469, "v0": -16.689, "v1": 32.256, "v2": -34.639, "v3": 25.906, "v4": -5.988, "amplitude": 35.079, "phase_angle": 170.914, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "1t", "suiteness": 0.010, "filter_rmsd": 0.040, "frame": { "rmsd": 0.017, "origin": [ 309.589, 175.778, 213.823 ], "x_axis": [ 0.990, 0.033, 0.138 ], "y_axis": [ 0.141, -0.326, -0.935 ], "z_axis": [ 0.014, 0.945, -0.327 ], "quaternion": [ 0.578, -0.813, -0.054, -0.047 ] } }, { "index": 1313, "index_chain": 1313, "chain_name": "a", "nt_resnum": 1314, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1314", "linked_nts": [ "///a/1313", "///a/1315" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": 151.125, "beta": 132.144, "gamma": 31.492, "delta": 79.805, "epsilon": -150.807, "zeta": -72.588, "epsilon_zeta": -78.218, "bb_type": "BI", "chi": -167.350, "glyco_bond": "anti", "C5prime_xyz": [ -1.394, 8.840, 0.897 ], "P_xyz": [ 1.157, 8.784, 1.452 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 63.662, "theta": -140.850, "eta_prime": 63.920, "theta_prime": -142.932, "eta_base": 88.559, "theta_base": -126.473, "v0": -4.018, "v1": -18.884, "v2": 33.193, "v3": -36.434, "v4": 25.539, "amplitude": 36.552, "phase_angle": 24.755, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.068, "frame": { "rmsd": 0.010, "origin": [ 298.703, 168.393, 209.529 ], "x_axis": [ 0.780, -0.452, 0.433 ], "y_axis": [ 0.616, 0.432, -0.659 ], "z_axis": [ 0.111, 0.780, 0.615 ], "quaternion": [ 0.841, -0.428, -0.096, -0.318 ] } }, { "index": 1314, "index_chain": 1314, "chain_name": "a", "nt_resnum": 1315, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1315", "linked_nts": [ "///a/1314", "///a/1316" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -72.223, "beta": 169.562, "gamma": 62.109, "delta": 81.134, "epsilon": -143.697, "zeta": 38.735, "epsilon_zeta": 177.568, "bb_type": "--", "chi": -154.402, "glyco_bond": "anti", "C5prime_xyz": [ -1.613, 8.806, 0.140 ], "P_xyz": [ 0.897, 9.428, -0.061 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.962, "theta": -23.456, "eta_prime": -178.773, "theta_prime": -63.281, "eta_base": -146.947, "theta_base": -175.018, "v0": -2.483, "v1": -19.933, "v2": 33.384, "v3": -35.809, "v4": 24.224, "amplitude": 36.137, "phase_angle": 22.512, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.839, "filter_rmsd": 0.100, "frame": { "rmsd": 0.010, "origin": [ 298.182, 169.621, 212.070 ], "x_axis": [ 0.980, -0.171, 0.106 ], "y_axis": [ 0.199, 0.745, -0.637 ], "z_axis": [ 0.030, 0.645, 0.764 ], "quaternion": [ 0.934, -0.343, -0.020, -0.099 ] } }, { "index": 1315, "index_chain": 1315, "chain_name": "a", "nt_resnum": 1316, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1316", "linked_nts": [ "///a/1315", "///a/1317" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BII", "alpha": 158.290, "beta": 154.434, "gamma": 62.028, "delta": 144.900, "epsilon": -108.106, "zeta": 153.263, "epsilon_zeta": 98.631, "bb_type": "BII", "chi": 43.587, "glyco_bond": "syn", "C5prime_xyz": [ -5.676, 4.490, 0.307 ], "P_xyz": [ -5.797, 1.933, -0.236 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 54.814, "theta": 173.128, "eta_prime": 119.505, "theta_prime": 163.056, "eta_base": 53.308, "theta_base": -168.672, "v0": -25.659, "v1": 38.305, "v2": -35.549, "v3": 21.667, "v4": 2.286, "amplitude": 38.387, "phase_angle": 157.830, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "5z", "suiteness": 0.661, "filter_rmsd": 0.068, "frame": { "rmsd": 0.014, "origin": [ 296.650, 173.201, 212.761 ], "x_axis": [ 0.262, -0.853, 0.451 ], "y_axis": [ 0.955, 0.297, 0.008 ], "z_axis": [ -0.141, 0.428, 0.893 ], "quaternion": [ 0.783, -0.134, -0.189, -0.577 ] } }, { "index": 1316, "index_chain": 1316, "chain_name": "a", "nt_resnum": 1317, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1317", "linked_nts": [ "///a/1316", "///a/1318" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -12.383, "beta": 152.106, "gamma": 36.648, "delta": 79.746, "epsilon": -139.109, "zeta": -80.131, "epsilon_zeta": -58.978, "bb_type": "BI", "chi": -169.041, "glyco_bond": "anti", "C5prime_xyz": [ -1.502, 8.728, 1.045 ], "P_xyz": [ 1.009, 9.040, 1.631 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -120.992, "theta": -143.304, "eta_prime": -130.965, "theta_prime": -140.504, "eta_base": -132.329, "theta_base": -115.228, "v0": -0.819, "v1": -21.898, "v2": 35.080, "v3": -36.518, "v4": 23.585, "amplitude": 37.301, "phase_angle": 19.872, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 312.733, 177.320, 208.953 ], "x_axis": [ -0.255, -0.355, -0.899 ], "y_axis": [ -0.966, 0.142, 0.218 ], "z_axis": [ 0.050, 0.924, -0.379 ], "quaternion": [ 0.356, -0.495, 0.666, 0.429 ] } }, { "index": 1317, "index_chain": 1317, "chain_name": "a", "nt_resnum": 1318, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1318", "linked_nts": [ "///a/1317", "///a/1319" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -56.252, "beta": 162.501, "gamma": 57.924, "delta": 79.974, "epsilon": -158.734, "zeta": -87.774, "epsilon_zeta": -70.960, "bb_type": "BI", "chi": -141.323, "glyco_bond": "anti", "C5prime_xyz": [ -1.741, 8.763, -0.618 ], "P_xyz": [ 0.699, 9.329, -1.302 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.714, "theta": -128.987, "eta_prime": -172.844, "theta_prime": -138.328, "eta_base": -135.075, "theta_base": -104.779, "v0": -3.202, "v1": -19.618, "v2": 33.637, "v3": -36.471, "v4": 25.031, "amplitude": 36.689, "phase_angle": 23.533, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.832, "filter_rmsd": 0.038, "frame": { "rmsd": 0.012, "origin": [ 313.902, 179.126, 207.041 ], "x_axis": [ -0.658, -0.094, -0.747 ], "y_axis": [ -0.636, 0.601, 0.484 ], "z_axis": [ 0.403, 0.794, -0.455 ], "quaternion": [ 0.349, -0.221, 0.824, 0.388 ] } }, { "index": 1318, "index_chain": 1318, "chain_name": "a", "nt_resnum": 1319, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1319", "linked_nts": [ "///a/1318", "///a/1320" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": 150.877, "beta": -140.980, "gamma": 166.290, "delta": 80.399, "epsilon": -137.888, "zeta": -78.606, "epsilon_zeta": -59.281, "bb_type": "BI", "chi": -157.608, "glyco_bond": "anti", "C5prime_xyz": [ -1.418, 8.830, 0.393 ], "P_xyz": [ 0.225, 9.647, -1.463 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.558, "theta": -155.541, "eta_prime": 175.668, "theta_prime": -157.413, "eta_base": -131.951, "theta_base": -137.413, "v0": -0.387, "v1": -22.142, "v2": 35.079, "v3": -36.263, "v4": 23.107, "amplitude": 37.147, "phase_angle": 19.209, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.478, "filter_rmsd": 0.065, "frame": { "rmsd": 0.009, "origin": [ 313.567, 180.693, 204.288 ], "x_axis": [ -0.970, 0.042, -0.241 ], "y_axis": [ -0.120, 0.779, 0.616 ], "z_axis": [ 0.214, 0.626, -0.750 ], "quaternion": [ 0.122, -0.021, 0.935, 0.332 ] } }, { "index": 1319, "index_chain": 1319, "chain_name": "a", "nt_resnum": 1320, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1320", "linked_nts": [ "///a/1319", "///a/1321" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -57.569, "beta": 178.461, "gamma": 42.930, "delta": 78.951, "epsilon": -152.035, "zeta": -81.110, "epsilon_zeta": -70.925, "bb_type": "BI", "chi": -158.768, "glyco_bond": "anti", "C5prime_xyz": [ -1.620, 8.791, 0.424 ], "P_xyz": [ 0.819, 9.538, 1.001 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.922, "theta": -158.001, "eta_prime": 176.874, "theta_prime": -155.071, "eta_base": -151.211, "theta_base": -134.389, "v0": -0.701, "v1": -22.766, "v2": 36.255, "v3": -37.614, "v4": 24.128, "amplitude": 38.479, "phase_angle": 19.575, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.742, "filter_rmsd": 0.100, "frame": { "rmsd": 0.008, "origin": [ 313.359, 182.774, 199.931 ], "x_axis": [ -0.907, 0.100, 0.409 ], "y_axis": [ 0.385, 0.588, 0.711 ], "z_axis": [ -0.169, 0.803, -0.572 ], "quaternion": [ -0.165, 0.139, 0.876, 0.432 ] } }, { "index": 1320, "index_chain": 1320, "chain_name": "a", "nt_resnum": 1321, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1321", "linked_nts": [ "///a/1320", "///a/1322" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -56.632, "beta": 167.974, "gamma": 51.620, "delta": 79.150, "epsilon": -129.901, "zeta": -93.156, "epsilon_zeta": -36.745, "bb_type": "--", "chi": -169.918, "glyco_bond": "anti", "C5prime_xyz": [ -1.664, 8.739, 1.083 ], "P_xyz": [ 0.825, 9.266, 1.669 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.805, "theta": -146.379, "eta_prime": -178.577, "theta_prime": -142.199, "eta_base": -151.714, "theta_base": -106.011, "v0": -1.584, "v1": -21.960, "v2": 35.878, "v3": -37.766, "v4": 24.817, "amplitude": 38.410, "phase_angle": 20.919, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.871, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 311.946, 184.829, 196.624 ], "x_axis": [ -0.585, 0.101, 0.805 ], "y_axis": [ 0.761, 0.412, 0.501 ], "z_axis": [ -0.280, 0.906, -0.318 ], "quaternion": [ -0.357, 0.283, 0.761, 0.462 ] } }, { "index": 1321, "index_chain": 1321, "chain_name": "a", "nt_resnum": 1322, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1322", "linked_nts": [ "///a/1321", "///a/1323" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -43.073, "beta": 151.191, "gamma": 43.292, "delta": 77.748, "epsilon": -134.913, "zeta": -89.609, "epsilon_zeta": -45.304, "bb_type": "BI", "chi": -153.602, "glyco_bond": "anti", "C5prime_xyz": [ -1.538, 8.855, 0.138 ], "P_xyz": [ 1.040, 9.193, -0.027 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.889, "theta": -145.853, "eta_prime": 177.977, "theta_prime": -145.560, "eta_base": -134.408, "theta_base": -130.510, "v0": -0.629, "v1": -22.918, "v2": 36.576, "v3": -37.862, "v4": 24.269, "amplitude": 38.799, "phase_angle": 19.491, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.318, "filter_rmsd": 0.065, "frame": { "rmsd": 0.009, "origin": [ 309.922, 187.014, 196.279 ], "x_axis": [ -0.019, 0.292, 0.956 ], "y_axis": [ 0.880, 0.458, -0.122 ], "z_axis": [ -0.474, 0.840, -0.266 ], "quaternion": [ 0.542, -0.444, -0.660, -0.272 ] } }, { "index": 1322, "index_chain": 1322, "chain_name": "a", "nt_resnum": 1323, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1323", "linked_nts": [ "///a/1322", "///a/1324" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -43.807, "beta": 154.668, "gamma": 49.632, "delta": 74.862, "epsilon": -143.432, "zeta": -79.804, "epsilon_zeta": -63.627, "bb_type": "BI", "chi": -162.606, "glyco_bond": "anti", "C5prime_xyz": [ -1.943, 8.843, 0.605 ], "P_xyz": [ 0.507, 9.701, 0.375 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.540, "theta": -149.198, "eta_prime": 179.744, "theta_prime": -146.477, "eta_base": -152.072, "theta_base": -107.824, "v0": -2.725, "v1": -22.529, "v2": 37.808, "v3": -40.418, "v4": 27.157, "amplitude": 40.870, "phase_angle": 22.320, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.434, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 306.805, 190.251, 196.193 ], "x_axis": [ 0.415, 0.235, 0.879 ], "y_axis": [ 0.836, 0.282, -0.471 ], "z_axis": [ -0.359, 0.930, -0.080 ], "quaternion": [ 0.636, -0.551, -0.486, -0.236 ] } }, { "index": 1323, "index_chain": 1323, "chain_name": "a", "nt_resnum": 1324, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1324", "linked_nts": [ "///a/1323", "///a/1325" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -55.871, "beta": 164.278, "gamma": 56.462, "delta": 80.296, "epsilon": -109.568, "zeta": -79.987, "epsilon_zeta": -29.582, "bb_type": "--", "chi": -148.297, "glyco_bond": "anti", "C5prime_xyz": [ -1.679, 8.801, -0.195 ], "P_xyz": [ 0.848, 9.307, -0.625 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -179.661, "theta": -125.721, "eta_prime": -169.371, "theta_prime": -121.580, "eta_base": -123.363, "theta_base": -73.879, "v0": -0.729, "v1": -22.200, "v2": 35.327, "v3": -36.670, "v4": 23.622, "amplitude": 37.512, "phase_angle": 19.649, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.794, "filter_rmsd": 0.105, "frame": { "rmsd": 0.008, "origin": [ 306.138, 192.786, 198.147 ], "x_axis": [ 0.860, 0.282, 0.426 ], "y_axis": [ 0.316, 0.361, -0.877 ], "z_axis": [ -0.401, 0.889, 0.222 ], "quaternion": [ 0.781, -0.565, -0.265, -0.011 ] } }, { "index": 1324, "index_chain": 1324, "chain_name": "a", "nt_resnum": 1325, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1325", "linked_nts": [ "///a/1324", "///a/1326" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -77.919, "beta": 131.387, "gamma": 93.574, "delta": 84.508, "epsilon": -168.771, "zeta": -126.664, "epsilon_zeta": -42.107, "bb_type": "BI", "chi": -151.318, "glyco_bond": "anti", "C5prime_xyz": [ -1.223, 8.660, -0.001 ], "P_xyz": [ 0.484, 8.643, -1.993 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.177, "theta": 154.734, "eta_prime": -168.279, "theta_prime": 141.815, "eta_base": -101.111, "theta_base": 150.771, "v0": 6.935, "v1": -28.246, "v2": 37.409, "v3": -34.472, "v4": 17.453, "amplitude": 37.803, "phase_angle": 8.275, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.010, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 309.221, 197.095, 198.244 ], "x_axis": [ 0.852, 0.332, -0.404 ], "y_axis": [ -0.509, 0.346, -0.788 ], "z_axis": [ -0.122, 0.877, 0.464 ], "quaternion": [ 0.816, -0.510, 0.087, 0.258 ] } }, { "index": 1325, "index_chain": 1325, "chain_name": "a", "nt_resnum": 1326, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1326", "linked_nts": [ "///a/1325", "///a/1327" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -46.425, "beta": 148.386, "gamma": 65.903, "delta": 83.075, "epsilon": -117.601, "zeta": -103.146, "epsilon_zeta": -14.455, "bb_type": "--", "chi": 174.182, "glyco_bond": "anti", "C5prime_xyz": [ -1.425, 8.249, 1.996 ], "P_xyz": [ 1.174, 8.334, 2.186 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -162.549, "theta": -141.792, "eta_prime": -170.342, "theta_prime": -138.541, "eta_base": -176.871, "theta_base": -108.755, "v0": 2.754, "v1": -23.511, "v2": 34.144, "v3": -33.533, "v4": 19.460, "amplitude": 35.231, "phase_angle": 14.270, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "7a", "suiteness": 0.343, "filter_rmsd": 0.041, "frame": { "rmsd": 0.014, "origin": [ 302.111, 199.718, 203.704 ], "x_axis": [ 0.996, 0.066, -0.066 ], "y_axis": [ -0.070, 0.059, -0.996 ], "z_axis": [ -0.062, 0.996, 0.063 ], "quaternion": [ 0.728, -0.684, 0.001, 0.047 ] } }, { "index": 1326, "index_chain": 1326, "chain_name": "a", "nt_resnum": 1327, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1327", "linked_nts": [ "///a/1326", "///a/1328" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -40.660, "beta": 145.133, "gamma": 45.590, "delta": 81.493, "epsilon": -121.941, "zeta": -63.209, "epsilon_zeta": -58.732, "bb_type": "--", "chi": -170.743, "glyco_bond": "anti", "C5prime_xyz": [ -1.307, 8.518, 1.182 ], "P_xyz": [ 1.295, 8.403, 1.302 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.301, "theta": -109.045, "eta_prime": -174.647, "theta_prime": -105.548, "eta_base": -131.073, "theta_base": -60.170, "v0": 4.428, "v1": -26.539, "v2": 37.367, "v3": -35.796, "v4": 19.772, "amplitude": 38.212, "phase_angle": 12.074, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.464, "filter_rmsd": 0.040, "frame": { "rmsd": 0.010, "origin": [ 302.363, 203.704, 204.900 ], "x_axis": [ 0.737, 0.125, -0.664 ], "y_axis": [ -0.660, -0.081, -0.747 ], "z_axis": [ -0.147, 0.989, 0.023 ], "quaternion": [ 0.648, -0.670, 0.200, 0.303 ] } }, { "index": 1327, "index_chain": 1327, "chain_name": "a", "nt_resnum": 1328, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1328", "linked_nts": [ "///a/1327", "///a/1329" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix", "alpha": -63.944, "beta": 155.631, "gamma": 67.793, "delta": 84.018, "epsilon": -114.110, "zeta": -67.868, "epsilon_zeta": -46.242, "bb_type": "--", "chi": -178.231, "glyco_bond": "anti", "C5prime_xyz": [ -1.376, 8.497, 1.577 ], "P_xyz": [ 1.237, 8.693, 1.621 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.540, "theta": -115.922, "eta_prime": -161.096, "theta_prime": -111.684, "eta_base": -88.100, "theta_base": -111.561, "v0": 1.012, "v1": -22.266, "v2": 33.842, "v3": -34.164, "v4": 20.956, "amplitude": 35.388, "phase_angle": 17.000, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.417, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 303.782, 207.456, 200.334 ], "x_axis": [ -0.276, -0.199, -0.940 ], "y_axis": [ -0.936, -0.167, 0.310 ], "z_axis": [ -0.219, 0.966, -0.140 ], "quaternion": [ 0.323, -0.508, 0.559, 0.571 ] } }, { "index": 1328, "index_chain": 1328, "chain_name": "a", "nt_resnum": 1329, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1329", "linked_nts": [ "///a/1328", "///a/1330" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -55.897, "beta": -138.737, "gamma": 39.355, "delta": 139.387, "epsilon": -123.003, "zeta": 78.754, "epsilon_zeta": 158.243, "bb_type": "--", "chi": -90.120, "glyco_bond": "anti", "C5prime_xyz": [ -2.754, 7.673, -2.594 ], "P_xyz": [ -1.149, 9.736, -2.675 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -159.178, "theta": 63.767, "eta_prime": -140.747, "theta_prime": 75.905, "eta_base": -136.280, "theta_base": 105.616, "v0": -24.812, "v1": 35.631, "v2": -32.350, "v3": 18.869, "v4": 3.515, "amplitude": 35.513, "phase_angle": 155.636, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1[", "suiteness": 0.433, "filter_rmsd": 0.100, "frame": { "rmsd": 0.005, "origin": [ 303.544, 214.002, 197.667 ], "x_axis": [ -0.519, -0.415, -0.747 ], "y_axis": [ -0.802, -0.066, 0.594 ], "z_axis": [ -0.296, 0.907, -0.299 ], "quaternion": [ 0.170, -0.460, 0.662, 0.567 ] } }, { "index": 1329, "index_chain": 1329, "chain_name": "a", "nt_resnum": 1330, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1330", "linked_nts": [ "///a/1329", "///a/1331" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -129.187, "beta": -147.059, "gamma": 72.274, "delta": 147.505, "epsilon": -127.150, "zeta": 106.624, "epsilon_zeta": 126.226, "bb_type": "--", "chi": -159.532, "glyco_bond": "anti", "C5prime_xyz": [ -1.759, 8.654, 0.927 ], "P_xyz": [ -0.098, 8.569, 2.964 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.894, "theta": 106.990, "eta_prime": -163.779, "theta_prime": 88.210, "eta_base": -172.429, "theta_base": 77.603, "v0": -20.624, "v1": 35.422, "v2": -35.850, "v3": 24.872, "v4": -2.826, "amplitude": 37.015, "phase_angle": 165.591, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.067, "frame": { "rmsd": 0.009, "origin": [ 306.771, 215.214, 211.103 ], "x_axis": [ 0.445, -0.328, -0.833 ], "y_axis": [ -0.895, -0.156, -0.417 ], "z_axis": [ 0.007, 0.932, -0.363 ], "quaternion": [ -0.481, 0.701, -0.436, -0.295 ] } }, { "index": 1330, "index_chain": 1330, "chain_name": "a", "nt_resnum": 1331, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1331", "linked_nts": [ "///a/1330", "///a/1332" ], "nt_type": "RNA", "dbn": ".", "summary": "BII,canonical,helix-end", "alpha": -79.321, "beta": 143.327, "gamma": 35.300, "delta": 86.724, "epsilon": -108.655, "zeta": 154.293, "epsilon_zeta": 97.052, "bb_type": "BII", "chi": -76.865, "glyco_bond": "--", "C5prime_xyz": [ -2.639, 6.566, -3.338 ], "P_xyz": [ -0.462, 5.766, -4.563 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.664, "theta": 130.690, "eta_prime": 170.761, "theta_prime": 155.715, "eta_base": 161.871, "theta_base": 175.183, "v0": 4.016, "v1": -23.145, "v2": 32.432, "v3": -31.032, "v4": 17.146, "amplitude": 33.143, "phase_angle": 11.891, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.274, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 301.128, 211.185, 211.025 ], "x_axis": [ 0.595, 0.041, 0.803 ], "y_axis": [ -0.773, 0.305, 0.556 ], "z_axis": [ -0.222, -0.951, 0.213 ], "quaternion": [ 0.727, 0.519, -0.353, 0.280 ] } }, { "index": 1331, "index_chain": 1331, "chain_name": "a", "nt_resnum": 1332, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1332", "linked_nts": [ "///a/1331", "///a/1333" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 156.486, "beta": -147.527, "gamma": 151.864, "delta": 81.240, "epsilon": -111.509, "zeta": -91.211, "epsilon_zeta": -20.298, "bb_type": "--", "chi": -168.576, "glyco_bond": "anti", "C5prime_xyz": [ -1.725, 8.728, 1.003 ], "P_xyz": [ 0.343, 9.744, -0.223 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -159.782, "theta": -145.549, "eta_prime": 173.030, "theta_prime": -144.996, "eta_base": 163.659, "theta_base": -101.679, "v0": -1.631, "v1": -20.535, "v2": 33.522, "v3": -35.482, "v4": 23.393, "amplitude": 35.950, "phase_angle": 21.177, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.006, "frame": { "rmsd": 0.006, "origin": [ 285.273, 209.935, 217.024 ], "x_axis": [ 0.663, -0.689, 0.293 ], "y_axis": [ 0.748, 0.628, -0.216 ], "z_axis": [ -0.036, 0.362, 0.931 ], "quaternion": [ 0.897, -0.161, -0.092, -0.400 ] } }, { "index": 1332, "index_chain": 1332, "chain_name": "a", "nt_resnum": 1333, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1333", "linked_nts": [ "///a/1332", "///a/1334" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -61.626, "beta": 142.312, "gamma": 63.250, "delta": 78.890, "epsilon": -108.738, "zeta": -37.789, "epsilon_zeta": -70.948, "bb_type": "--", "chi": -151.775, "glyco_bond": "anti", "C5prime_xyz": [ -1.730, 8.765, -0.015 ], "P_xyz": [ 0.631, 9.058, -1.072 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.618, "theta": -93.639, "eta_prime": -179.251, "theta_prime": -93.365, "eta_base": -123.777, "theta_base": -66.128, "v0": -0.478, "v1": -23.093, "v2": 36.549, "v3": -37.848, "v4": 24.164, "amplitude": 38.726, "phase_angle": 19.302, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.923, "filter_rmsd": 0.036, "frame": { "rmsd": 0.014, "origin": [ 286.643, 209.755, 220.156 ], "x_axis": [ 0.988, -0.151, 0.021 ], "y_axis": [ 0.152, 0.986, -0.065 ], "z_axis": [ -0.011, 0.068, 0.998 ], "quaternion": [ 0.997, -0.033, -0.008, -0.076 ] } }, { "index": 1333, "index_chain": 1333, "chain_name": "a", "nt_resnum": 1334, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1334", "linked_nts": [ "///a/1333", "///a/1335" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -102.948, "beta": 122.583, "gamma": 136.126, "delta": 83.101, "epsilon": -135.447, "zeta": -51.954, "epsilon_zeta": -83.493, "bb_type": "BI", "chi": 177.205, "glyco_bond": "anti", "C5prime_xyz": [ -1.080, 8.126, 1.846 ], "P_xyz": [ 0.190, 9.931, 0.431 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.546, "theta": -144.458, "eta_prime": -151.062, "theta_prime": -139.886, "eta_base": -88.615, "theta_base": -92.134, "v0": 8.896, "v1": -29.673, "v2": 38.068, "v3": -33.932, "v4": 15.843, "amplitude": 38.241, "phase_angle": 5.464, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.009, "origin": [ 293.759, 212.987, 222.402 ], "x_axis": [ 0.527, 0.814, -0.245 ], "y_axis": [ -0.831, 0.554, 0.054 ], "z_axis": [ 0.180, 0.175, 0.968 ], "quaternion": [ 0.873, -0.034, 0.121, 0.471 ] } }, { "index": 1334, "index_chain": 1334, "chain_name": "a", "nt_resnum": 1335, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1335", "linked_nts": [ "///a/1334", "///a/1336" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -85.616, "beta": -176.221, "gamma": 66.943, "delta": 81.468, "epsilon": -161.900, "zeta": -86.637, "epsilon_zeta": -75.263, "bb_type": "BI", "chi": -154.127, "glyco_bond": "anti", "C5prime_xyz": [ -1.581, 8.788, 0.151 ], "P_xyz": [ 0.977, 9.366, 0.021 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.613, "theta": -168.678, "eta_prime": -171.972, "theta_prime": -172.409, "eta_base": -102.189, "theta_base": -179.945, "v0": -0.229, "v1": -22.148, "v2": 34.788, "v3": -35.816, "v4": 22.745, "amplitude": 36.769, "phase_angle": 18.892, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.399, "filter_rmsd": 0.102, "frame": { "rmsd": 0.007, "origin": [ 296.356, 216.116, 224.152 ], "x_axis": [ -0.315, 0.949, -0.022 ], "y_axis": [ -0.862, -0.277, 0.426 ], "z_axis": [ 0.398, 0.153, 0.905 ], "quaternion": [ 0.573, 0.119, 0.183, 0.790 ] } }, { "index": 1335, "index_chain": 1335, "chain_name": "a", "nt_resnum": 1336, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1336", "linked_nts": [ "///a/1335", "///a/1337" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -76.874, "beta": 161.538, "gamma": 75.236, "delta": 78.959, "epsilon": -153.402, "zeta": -81.256, "epsilon_zeta": -72.145, "bb_type": "BI", "chi": -153.018, "glyco_bond": "anti", "C5prime_xyz": [ -1.666, 8.879, 0.073 ], "P_xyz": [ 0.701, 9.468, -0.864 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.341, "theta": -156.590, "eta_prime": 174.791, "theta_prime": -159.895, "eta_base": 175.833, "theta_base": -142.795, "v0": -1.309, "v1": -22.425, "v2": 36.253, "v3": -37.975, "v4": 24.751, "amplitude": 38.692, "phase_angle": 20.452, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.254, "filter_rmsd": 0.063, "frame": { "rmsd": 0.009, "origin": [ 299.961, 214.710, 225.736 ], "x_axis": [ -0.366, 0.925, 0.101 ], "y_axis": [ -0.688, -0.342, 0.640 ], "z_axis": [ 0.626, 0.165, 0.762 ], "quaternion": [ 0.513, 0.231, 0.256, 0.786 ] } }, { "index": 1336, "index_chain": 1336, "chain_name": "a", "nt_resnum": 1337, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1337", "linked_nts": [ "///a/1336", "///a/1338" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -60.529, "beta": 175.545, "gamma": 48.112, "delta": 81.620, "epsilon": -141.297, "zeta": -80.751, "epsilon_zeta": -60.546, "bb_type": "BI", "chi": -172.828, "glyco_bond": "anti", "C5prime_xyz": [ -1.629, 8.720, 1.229 ], "P_xyz": [ 0.751, 9.137, 2.258 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.415, "theta": -146.630, "eta_prime": 176.955, "theta_prime": -143.558, "eta_base": -156.013, "theta_base": -116.185, "v0": -2.941, "v1": -19.424, "v2": 33.088, "v3": -35.684, "v4": 24.339, "amplitude": 35.986, "phase_angle": 23.150, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.875, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 303.403, 216.223, 228.190 ], "x_axis": [ -0.857, 0.501, -0.121 ], "y_axis": [ -0.507, -0.778, 0.371 ], "z_axis": [ 0.092, 0.379, 0.921 ], "quaternion": [ 0.267, -0.008, 0.199, 0.943 ] } }, { "index": 1337, "index_chain": 1337, "chain_name": "a", "nt_resnum": 1338, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1338", "linked_nts": [ "///a/1337", "///a/1339" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -64.824, "beta": 165.523, "gamma": 57.449, "delta": 82.265, "epsilon": -156.274, "zeta": -82.857, "epsilon_zeta": -73.417, "bb_type": "BI", "chi": -159.790, "glyco_bond": "anti", "C5prime_xyz": [ -1.525, 8.830, 0.497 ], "P_xyz": [ 1.031, 9.333, 0.515 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.533, "theta": -164.179, "eta_prime": -179.787, "theta_prime": -154.055, "eta_base": -139.726, "theta_base": -149.743, "v0": -1.384, "v1": -20.822, "v2": 33.786, "v3": -35.533, "v4": 23.336, "amplitude": 36.133, "phase_angle": 20.768, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.891, "filter_rmsd": 0.066, "frame": { "rmsd": 0.010, "origin": [ 304.060, 218.694, 230.288 ], "x_axis": [ -0.994, 0.003, 0.107 ], "y_axis": [ 0.049, -0.878, 0.476 ], "z_axis": [ 0.095, 0.478, 0.873 ], "quaternion": [ -0.012, 0.052, 0.247, 0.968 ] } }, { "index": 1338, "index_chain": 1338, "chain_name": "a", "nt_resnum": 1339, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1339", "linked_nts": [ "///a/1338", "///a/1340" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-stack,non-canonical,helix-end,multiplet", "alpha": -59.323, "beta": -150.765, "gamma": 67.540, "delta": 143.852, "epsilon": -135.230, "zeta": 119.106, "epsilon_zeta": 105.664, "bb_type": "--", "chi": -120.971, "glyco_bond": "anti", "C5prime_xyz": [ -2.411, 8.550, -1.221 ], "P_xyz": [ -0.280, 9.844, -0.405 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -142.888, "theta": 114.076, "eta_prime": -133.690, "theta_prime": 105.974, "eta_base": -143.316, "theta_base": 114.675, "v0": -27.092, "v1": 39.177, "v2": -35.633, "v3": 20.870, "v4": 3.693, "amplitude": 39.040, "phase_angle": 155.885, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1[", "suiteness": 0.576, "filter_rmsd": 0.095, "frame": { "rmsd": 0.016, "origin": [ 307.333, 224.093, 235.885 ], "x_axis": [ -0.998, -0.050, -0.036 ], "y_axis": [ 0.044, -0.984, 0.172 ], "z_axis": [ -0.044, 0.170, 0.984 ], "quaternion": [ -0.024, -0.020, 0.086, 0.996 ] } }, { "index": 1339, "index_chain": 1339, "chain_name": "a", "nt_resnum": 1340, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1340", "linked_nts": [ "///a/1339", "///a/1341" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -51.005, "beta": 164.856, "gamma": 16.333, "delta": 146.268, "epsilon": -145.355, "zeta": -174.665, "epsilon_zeta": 29.310, "bb_type": "--", "chi": -148.732, "glyco_bond": "anti", "C5prime_xyz": [ -2.185, 8.721, 0.292 ], "P_xyz": [ -0.836, 9.689, 2.320 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -179.523, "theta": 161.512, "eta_prime": -173.475, "theta_prime": 152.701, "eta_base": 176.694, "theta_base": 167.849, "v0": -25.043, "v1": 38.543, "v2": -36.545, "v3": 23.049, "v4": 1.032, "amplitude": 38.961, "phase_angle": 159.717, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.037, "frame": { "rmsd": 0.012, "origin": [ 317.614, 221.552, 231.121 ], "x_axis": [ -0.796, 0.562, -0.225 ], "y_axis": [ -0.555, -0.530, 0.641 ], "z_axis": [ 0.240, 0.635, 0.734 ], "quaternion": [ 0.319, 0.004, 0.365, 0.875 ] } }, { "index": 1340, "index_chain": 1340, "chain_name": "a", "nt_resnum": 1341, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1341", "linked_nts": [ "///a/1340", "///a/1342" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": -75.310, "beta": 109.933, "gamma": 146.342, "delta": 125.208, "epsilon": 44.092, "zeta": -74.730, "epsilon_zeta": -241.178, "bb_type": "--", "chi": -100.829, "glyco_bond": "anti", "C5prime_xyz": [ -2.608, 8.038, -2.235 ], "P_xyz": [ -2.623, 7.432, -4.773 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -12.636, "theta": -4.999, "eta_prime": -75.577, "theta_prime": 57.829, "eta_base": -102.739, "theta_base": 83.787, "v0": -24.631, "v1": 30.421, "v2": -24.588, "v3": 11.078, "v4": 8.309, "amplitude": 29.886, "phase_angle": 145.359, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 323.371, 217.651, 229.702 ], "x_axis": [ 0.952, 0.228, 0.204 ], "y_axis": [ 0.004, -0.677, 0.736 ], "z_axis": [ 0.306, -0.700, -0.645 ], "quaternion": [ 0.397, 0.905, 0.064, 0.141 ] } }, { "index": 1341, "index_chain": 1341, "chain_name": "a", "nt_resnum": 1342, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1342", "linked_nts": [ "///a/1341", "///a/1343" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -102.370, "beta": -127.297, "gamma": 82.639, "delta": 86.481, "epsilon": -149.840, "zeta": -75.249, "epsilon_zeta": -74.591, "bb_type": "BI", "chi": -152.264, "glyco_bond": "anti", "C5prime_xyz": [ -1.574, 8.764, 0.086 ], "P_xyz": [ 0.968, 8.677, 0.735 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.404, "theta": -135.019, "eta_prime": 156.871, "theta_prime": -135.704, "eta_base": 150.298, "theta_base": -105.751, "v0": -0.840, "v1": -19.444, "v2": 31.145, "v3": -32.509, "v4": 21.013, "amplitude": 33.147, "phase_angle": 20.015, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.099, "frame": { "rmsd": 0.011, "origin": [ 315.468, 218.989, 230.058 ], "x_axis": [ 0.945, 0.077, -0.318 ], "y_axis": [ 0.220, -0.868, 0.444 ], "z_axis": [ -0.242, -0.490, -0.837 ], "quaternion": [ 0.244, 0.955, 0.078, -0.147 ] } }, { "index": 1342, "index_chain": 1342, "chain_name": "a", "nt_resnum": 1343, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1343", "linked_nts": [ "///a/1342", "///a/1344" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -81.074, "beta": 167.004, "gamma": 74.228, "delta": 83.771, "epsilon": -141.503, "zeta": -47.915, "epsilon_zeta": -93.589, "bb_type": "BI", "chi": -166.336, "glyco_bond": "anti", "C5prime_xyz": [ -1.199, 8.553, 0.899 ], "P_xyz": [ 1.366, 8.814, 0.464 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.835, "theta": -112.095, "eta_prime": -174.553, "theta_prime": -112.520, "eta_base": -128.134, "theta_base": -65.932, "v0": 4.623, "v1": -25.894, "v2": 36.132, "v3": -34.414, "v4": 18.819, "amplitude": 36.879, "phase_angle": 11.545, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.305, "filter_rmsd": 0.041, "frame": { "rmsd": 0.013, "origin": [ 315.587, 216.402, 225.451 ], "x_axis": [ 0.889, -0.437, 0.134 ], "y_axis": [ -0.407, -0.625, 0.667 ], "z_axis": [ -0.208, -0.647, -0.733 ], "quaternion": [ 0.365, 0.901, -0.234, -0.021 ] } }, { "index": 1343, "index_chain": 1343, "chain_name": "a", "nt_resnum": 1344, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1344", "linked_nts": [ "///a/1343", "///a/1345" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -87.544, "beta": -178.609, "gamma": 65.952, "delta": 81.709, "epsilon": -141.054, "zeta": -64.343, "epsilon_zeta": -76.711, "bb_type": "BI", "chi": -152.538, "glyco_bond": "anti", "C5prime_xyz": [ -1.363, 8.685, 0.059 ], "P_xyz": [ 1.210, 9.016, -0.274 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.719, "theta": -131.637, "eta_prime": -171.035, "theta_prime": -133.775, "eta_base": -98.456, "theta_base": -102.278, "v0": 3.591, "v1": -25.923, "v2": 37.181, "v3": -36.049, "v4": 20.459, "amplitude": 38.201, "phase_angle": 13.273, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.348, "filter_rmsd": 0.040, "frame": { "rmsd": 0.013, "origin": [ 318.206, 211.693, 225.057 ], "x_axis": [ 0.073, -0.724, 0.686 ], "y_axis": [ -0.997, -0.072, 0.029 ], "z_axis": [ 0.028, -0.686, -0.727 ], "quaternion": [ 0.262, 0.684, -0.629, 0.261 ] } }, { "index": 1344, "index_chain": 1344, "chain_name": "a", "nt_resnum": 1345, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1345", "linked_nts": [ "///a/1344", "///a/1346" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -93.786, "beta": 163.062, "gamma": 84.505, "delta": 79.464, "epsilon": -152.457, "zeta": -71.233, "epsilon_zeta": -81.223, "bb_type": "BI", "chi": -158.064, "glyco_bond": "anti", "C5prime_xyz": [ -1.633, 8.788, 0.372 ], "P_xyz": [ 0.670, 9.486, -0.661 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.715, "theta": -149.253, "eta_prime": 178.572, "theta_prime": -153.629, "eta_base": -129.596, "theta_base": -144.673, "v0": -0.447, "v1": -23.006, "v2": 36.292, "v3": -37.448, "v4": 23.898, "amplitude": 38.418, "phase_angle": 19.150, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.010, "filter_rmsd": 0.103, "frame": { "rmsd": 0.008, "origin": [ 318.981, 208.476, 224.780 ], "x_axis": [ -0.500, -0.448, 0.741 ], "y_axis": [ -0.855, 0.115, -0.506 ], "z_axis": [ 0.141, -0.887, -0.440 ], "quaternion": [ -0.209, -0.454, 0.717, -0.486 ] } }, { "index": 1345, "index_chain": 1345, "chain_name": "a", "nt_resnum": 1346, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1346", "linked_nts": [ "///a/1345", "///a/1347" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -75.678, "beta": -172.492, "gamma": 53.578, "delta": 80.195, "epsilon": -148.606, "zeta": -60.803, "epsilon_zeta": -87.803, "bb_type": "BI", "chi": -149.325, "glyco_bond": "anti", "C5prime_xyz": [ -1.678, 8.885, -0.193 ], "P_xyz": [ 0.761, 9.810, -0.001 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.265, "theta": -144.379, "eta_prime": 174.832, "theta_prime": -147.802, "eta_base": -165.016, "theta_base": -128.127, "v0": -3.538, "v1": -19.454, "v2": 33.619, "v3": -36.567, "v4": 25.325, "amplitude": 36.789, "phase_angle": 23.958, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.841, "filter_rmsd": 0.059, "frame": { "rmsd": 0.014, "origin": [ 320.936, 205.131, 224.702 ], "x_axis": [ -0.825, -0.022, 0.564 ], "y_axis": [ -0.561, 0.155, -0.814 ], "z_axis": [ -0.069, -0.988, -0.140 ], "quaternion": [ -0.218, -0.200, 0.728, -0.619 ] } }, { "index": 1346, "index_chain": 1346, "chain_name": "a", "nt_resnum": 1347, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1347", "linked_nts": [ "///a/1346", "///a/1348" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -120.413, "beta": 140.450, "gamma": 126.479, "delta": 81.796, "epsilon": -143.946, "zeta": -70.479, "epsilon_zeta": -73.467, "bb_type": "BI", "chi": -162.630, "glyco_bond": "anti", "C5prime_xyz": [ -1.245, 8.712, 0.673 ], "P_xyz": [ 0.128, 9.879, -1.229 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.320, "theta": -160.165, "eta_prime": -176.572, "theta_prime": -159.383, "eta_base": -143.398, "theta_base": -126.065, "v0": 2.999, "v1": -25.337, "v2": 36.802, "v3": -36.029, "v4": 20.844, "amplitude": 37.952, "phase_angle": 14.142, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 320.611, 201.306, 225.721 ], "x_axis": [ -0.977, -0.003, 0.211 ], "y_axis": [ -0.211, -0.007, -0.977 ], "z_axis": [ 0.005, -1.000, 0.006 ], "quaternion": [ 0.074, 0.076, -0.701, 0.705 ] } }, { "index": 1347, "index_chain": 1347, "chain_name": "a", "nt_resnum": 1348, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1348", "linked_nts": [ "///a/1347", "///a/1349" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -67.827, "beta": 178.829, "gamma": 52.816, "delta": 81.370, "epsilon": -149.508, "zeta": -76.740, "epsilon_zeta": -72.769, "bb_type": "BI", "chi": -164.161, "glyco_bond": "anti", "C5prime_xyz": [ -1.294, 8.637, 0.807 ], "P_xyz": [ 1.256, 8.953, 1.276 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.818, "theta": -150.006, "eta_prime": -178.200, "theta_prime": -147.330, "eta_base": -131.175, "theta_base": -127.877, "v0": 4.254, "v1": -26.480, "v2": 37.420, "v3": -35.887, "v4": 19.969, "amplitude": 38.300, "phase_angle": 12.305, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.979, "filter_rmsd": 0.111, "frame": { "rmsd": 0.015, "origin": [ 318.910, 197.448, 226.752 ], "x_axis": [ -0.843, 0.296, -0.448 ], "y_axis": [ 0.475, 0.022, -0.880 ], "z_axis": [ -0.250, -0.955, -0.159 ], "quaternion": [ 0.070, 0.271, 0.712, -0.645 ] } }, { "index": 1348, "index_chain": 1348, "chain_name": "a", "nt_resnum": 1349, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1349", "linked_nts": [ "///a/1348", "///a/1350" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -64.274, "beta": 169.654, "gamma": 62.807, "delta": 81.781, "epsilon": -152.892, "zeta": -78.835, "epsilon_zeta": -74.057, "bb_type": "BI", "chi": -171.015, "glyco_bond": "anti", "C5prime_xyz": [ -1.544, 8.637, 1.157 ], "P_xyz": [ 1.013, 9.084, 1.412 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.579, "theta": -152.280, "eta_prime": -172.449, "theta_prime": -152.355, "eta_base": -140.723, "theta_base": -128.852, "v0": 0.262, "v1": -22.530, "v2": 34.981, "v3": -35.744, "v4": 22.407, "amplitude": 36.820, "phase_angle": 18.182, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.830, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 316.856, 193.467, 227.529 ], "x_axis": [ -0.512, 0.372, -0.775 ], "y_axis": [ 0.831, -0.013, -0.555 ], "z_axis": [ -0.216, -0.928, -0.303 ], "quaternion": [ 0.208, 0.448, 0.671, -0.553 ] } }, { "index": 1349, "index_chain": 1349, "chain_name": "a", "nt_resnum": 1350, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1350", "linked_nts": [ "///a/1349", "///a/1351" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -61.601, "beta": 168.061, "gamma": 59.937, "delta": 81.985, "epsilon": -149.247, "zeta": -84.497, "epsilon_zeta": -64.751, "bb_type": "BI", "chi": -162.894, "glyco_bond": "anti", "C5prime_xyz": [ -1.166, 8.643, 0.691 ], "P_xyz": [ 1.434, 8.875, 0.650 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.387, "theta": -153.165, "eta_prime": -173.541, "theta_prime": -152.072, "eta_base": -136.804, "theta_base": -127.683, "v0": 2.419, "v1": -24.303, "v2": 35.680, "v3": -35.254, "v4": 20.732, "amplitude": 36.926, "phase_angle": 14.922, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.887, "filter_rmsd": 0.040, "frame": { "rmsd": 0.013, "origin": [ 314.723, 190.410, 227.384 ], "x_axis": [ -0.031, 0.163, -0.986 ], "y_axis": [ 0.968, -0.241, -0.070 ], "z_axis": [ -0.249, -0.957, -0.150 ], "quaternion": [ 0.380, 0.583, 0.485, -0.530 ] } }, { "index": 1350, "index_chain": 1350, "chain_name": "a", "nt_resnum": 1351, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1351", "linked_nts": [ "///a/1350", "///a/1352" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -55.731, "beta": 163.175, "gamma": 56.270, "delta": 86.592, "epsilon": -121.057, "zeta": -74.289, "epsilon_zeta": -46.768, "bb_type": "--", "chi": -149.007, "glyco_bond": "anti", "C5prime_xyz": [ -0.973, 8.640, -0.058 ], "P_xyz": [ 1.629, 8.571, -0.316 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.320, "theta": -119.133, "eta_prime": -168.941, "theta_prime": -119.307, "eta_base": -137.190, "theta_base": -99.083, "v0": 3.754, "v1": -23.735, "v2": 33.530, "v3": -32.263, "v4": 18.081, "amplitude": 34.343, "phase_angle": 12.488, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.768, "filter_rmsd": 0.043, "frame": { "rmsd": 0.018, "origin": [ 313.119, 187.953, 226.754 ], "x_axis": [ 0.457, -0.052, -0.888 ], "y_axis": [ 0.765, -0.487, 0.422 ], "z_axis": [ -0.454, -0.872, -0.183 ], "quaternion": [ 0.444, 0.729, 0.245, -0.460 ] } }, { "index": 1351, "index_chain": 1351, "chain_name": "a", "nt_resnum": 1352, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1352", "linked_nts": [ "///a/1351", "///a/1353" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -68.933, "beta": 167.236, "gamma": 54.233, "delta": 84.109, "epsilon": -140.311, "zeta": -41.583, "epsilon_zeta": -98.729, "bb_type": "BI", "chi": -145.094, "glyco_bond": "anti", "C5prime_xyz": [ -1.922, 8.816, -0.436 ], "P_xyz": [ 0.541, 9.598, -0.633 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.722, "theta": -103.606, "eta_prime": 178.752, "theta_prime": -100.785, "eta_base": -146.221, "theta_base": -53.896, "v0": -7.318, "v1": -15.049, "v2": 30.195, "v3": -35.280, "v4": 26.897, "amplitude": 34.996, "phase_angle": 30.365, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.564, "filter_rmsd": 0.101, "frame": { "rmsd": 0.014, "origin": [ 312.637, 185.037, 224.223 ], "x_axis": [ 0.916, 0.267, -0.299 ], "y_axis": [ 0.399, -0.530, 0.748 ], "z_axis": [ 0.041, -0.805, -0.592 ], "quaternion": [ 0.445, 0.872, 0.191, -0.074 ] } }, { "index": 1352, "index_chain": 1352, "chain_name": "a", "nt_resnum": 1353, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1353", "linked_nts": [ "///a/1352", "///a/1354" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -91.814, "beta": -175.125, "gamma": 60.524, "delta": 83.275, "epsilon": -159.563, "zeta": -97.252, "epsilon_zeta": -62.311, "bb_type": "BI", "chi": -146.845, "glyco_bond": "anti", "C5prime_xyz": [ -1.464, 8.788, -0.256 ], "P_xyz": [ 1.106, 9.218, -0.336 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 150.290, "theta": -153.120, "eta_prime": -174.242, "theta_prime": 169.322, "eta_base": -108.303, "theta_base": 127.206, "v0": 0.130, "v1": -22.025, "v2": 34.223, "v3": -35.067, "v4": 22.053, "amplitude": 36.059, "phase_angle": 18.365, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.223, "filter_rmsd": 0.066, "frame": { "rmsd": 0.009, "origin": [ 319.444, 182.240, 224.964 ], "x_axis": [ 0.417, 0.051, 0.908 ], "y_axis": [ -0.693, -0.629, 0.353 ], "z_axis": [ 0.589, -0.776, -0.227 ], "quaternion": [ 0.375, 0.754, -0.213, 0.496 ] } }, { "index": 1353, "index_chain": 1353, "chain_name": "a", "nt_resnum": 1354, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1354", "linked_nts": [ "///a/1353", "///a/1355" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI,non-canonical,helix-end,multiplet", "alpha": 153.126, "beta": 163.119, "gamma": 57.596, "delta": 82.738, "epsilon": -141.311, "zeta": -53.109, "epsilon_zeta": -88.203, "bb_type": "BI", "chi": -172.094, "glyco_bond": "anti", "C5prime_xyz": [ -1.699, 8.654, 1.173 ], "P_xyz": [ 0.837, 9.154, 1.593 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 21.021, "theta": -118.572, "eta_prime": 30.240, "theta_prime": -118.245, "eta_base": 26.189, "theta_base": -65.748, "v0": -2.923, "v1": -19.392, "v2": 32.906, "v3": -35.501, "v4": 24.220, "amplitude": 35.781, "phase_angle": 23.126, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.383, "filter_rmsd": 0.039, "frame": { "rmsd": 0.011, "origin": [ 311.085, 172.842, 216.144 ], "x_axis": [ -0.848, -0.040, 0.529 ], "y_axis": [ 0.530, -0.043, 0.847 ], "z_axis": [ -0.011, 0.998, 0.058 ], "quaternion": [ -0.204, 0.185, 0.661, 0.698 ] } }, { "index": 1354, "index_chain": 1354, "chain_name": "a", "nt_resnum": 1355, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1355", "linked_nts": [ "///a/1354", "///a/1356" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -84.070, "beta": 171.262, "gamma": 65.859, "delta": 82.159, "epsilon": -111.695, "zeta": -85.980, "epsilon_zeta": -25.715, "bb_type": "--", "chi": -162.726, "glyco_bond": "anti", "C5prime_xyz": [ -1.551, 8.748, 0.666 ], "P_xyz": [ 1.000, 9.315, 0.560 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.869, "theta": -129.526, "eta_prime": -170.678, "theta_prime": -127.158, "eta_base": -97.597, "theta_base": -82.235, "v0": -0.429, "v1": -21.619, "v2": 34.126, "v3": -35.354, "v4": 22.599, "amplitude": 36.156, "phase_angle": 19.291, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.479, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 308.550, 175.792, 219.132 ], "x_axis": [ 0.013, -0.097, 0.995 ], "y_axis": [ 0.995, 0.098, -0.004 ], "z_axis": [ -0.097, 0.990, 0.098 ], "quaternion": [ 0.550, -0.452, -0.497, -0.497 ] } }, { "index": 1355, "index_chain": 1355, "chain_name": "a", "nt_resnum": 1356, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1356", "linked_nts": [ "///a/1355", "///a/1357" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -75.494, "beta": 156.094, "gamma": 62.907, "delta": 82.407, "epsilon": -133.437, "zeta": -117.234, "epsilon_zeta": -16.203, "bb_type": "--", "chi": -144.012, "glyco_bond": "anti", "C5prime_xyz": [ -1.382, 8.625, -0.444 ], "P_xyz": [ 1.054, 8.666, -1.393 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.358, "theta": 176.145, "eta_prime": 172.485, "theta_prime": -158.332, "eta_base": -129.055, "theta_base": -130.217, "v0": 3.423, "v1": -25.159, "v2": 36.092, "v3": -35.120, "v4": 20.041, "amplitude": 37.111, "phase_angle": 13.457, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.265, "filter_rmsd": 0.040, "frame": { "rmsd": 0.017, "origin": [ 309.221, 178.264, 221.727 ], "x_axis": [ 0.731, -0.307, 0.610 ], "y_axis": [ 0.671, 0.490, -0.557 ], "z_axis": [ -0.128, 0.816, 0.564 ], "quaternion": [ 0.834, -0.411, -0.221, -0.293 ] } }, { "index": 1356, "index_chain": 1356, "chain_name": "a", "nt_resnum": 1357, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1357", "linked_nts": [ "///a/1356", "///a/1358" ], "nt_type": "RNA", "dbn": ".", "summary": "BII,non-canonical,helix-end", "alpha": -68.601, "beta": -154.407, "gamma": 71.860, "delta": 143.727, "epsilon": -97.234, "zeta": 175.966, "epsilon_zeta": 86.799, "bb_type": "BII", "chi": 106.761, "glyco_bond": "--", "C5prime_xyz": [ -4.152, 6.256, 2.873 ], "P_xyz": [ -4.952, 4.054, 4.046 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -124.196, "theta": -158.907, "eta_prime": -138.577, "theta_prime": 152.253, "eta_base": -148.061, "theta_base": 102.949, "v0": -26.655, "v1": 38.958, "v2": -35.595, "v3": 21.209, "v4": 3.221, "amplitude": 38.813, "phase_angle": 156.504, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1[", "suiteness": 0.026, "filter_rmsd": 0.055, "frame": { "rmsd": 0.027, "origin": [ 311.036, 185.589, 225.312 ], "x_axis": [ -0.859, -0.269, 0.436 ], "y_axis": [ -0.508, 0.553, -0.660 ], "z_axis": [ -0.064, -0.788, -0.612 ], "quaternion": [ -0.144, -0.223, 0.869, -0.416 ] } }, { "index": 1357, "index_chain": 1357, "chain_name": "a", "nt_resnum": 1358, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1358", "linked_nts": [ "///a/1357", "///a/1359" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": 58.728, "beta": -167.557, "gamma": 107.920, "delta": 145.481, "epsilon": -102.404, "zeta": -69.933, "epsilon_zeta": -32.471, "bb_type": "--", "chi": -105.236, "glyco_bond": "anti", "C5prime_xyz": [ -2.277, 8.219, -1.915 ], "P_xyz": [ 0.164, 8.500, -2.840 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 52.725, "theta": -60.974, "eta_prime": 69.408, "theta_prime": -79.760, "eta_base": 74.194, "theta_base": -39.533, "v0": -23.562, "v1": 36.684, "v2": -34.985, "v3": 22.307, "v4": 0.621, "amplitude": 37.161, "phase_angle": 160.297, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.099, "frame": { "rmsd": 0.009, "origin": [ 304.675, 195.434, 212.914 ], "x_axis": [ -0.050, -0.882, -0.468 ], "y_axis": [ 0.538, -0.418, 0.731 ], "z_axis": [ -0.841, -0.216, 0.496 ], "quaternion": [ 0.507, 0.467, -0.184, -0.701 ] } }, { "index": 1358, "index_chain": 1358, "chain_name": "a", "nt_resnum": 1359, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1359", "linked_nts": [ "///a/1358", "///a/1360" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -78.485, "beta": 177.097, "gamma": 62.884, "delta": 82.931, "epsilon": -137.281, "zeta": -71.128, "epsilon_zeta": -66.153, "bb_type": "BI", "chi": 178.397, "glyco_bond": "anti", "C5prime_xyz": [ -1.285, 8.368, 1.766 ], "P_xyz": [ 1.248, 8.433, 2.423 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.666, "theta": -132.891, "eta_prime": -161.028, "theta_prime": -129.488, "eta_base": -135.702, "theta_base": -95.030, "v0": 3.359, "v1": -25.098, "v2": 36.099, "v3": -35.098, "v4": 20.026, "amplitude": 37.124, "phase_angle": 13.497, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.755, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 311.577, 189.216, 225.816 ], "x_axis": [ 0.750, 0.154, -0.644 ], "y_axis": [ -0.563, 0.659, -0.498 ], "z_axis": [ 0.348, 0.736, 0.581 ], "quaternion": [ 0.865, -0.357, 0.287, 0.207 ] } }, { "index": 1359, "index_chain": 1359, "chain_name": "a", "nt_resnum": 1360, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1360", "linked_nts": [ "///a/1359", "///a/1361" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -66.307, "beta": 177.173, "gamma": 55.066, "delta": 83.114, "epsilon": -143.064, "zeta": -66.573, "epsilon_zeta": -76.491, "bb_type": "BI", "chi": -169.786, "glyco_bond": "anti", "C5prime_xyz": [ -1.308, 8.563, 1.136 ], "P_xyz": [ 1.225, 8.750, 1.741 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.206, "theta": -134.877, "eta_prime": -173.308, "theta_prime": -135.154, "eta_base": -121.654, "theta_base": -98.064, "v0": 3.581, "v1": -25.305, "v2": 36.180, "v3": -35.047, "v4": 19.870, "amplitude": 37.155, "phase_angle": 13.158, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.920, "filter_rmsd": 0.111, "frame": { "rmsd": 0.016, "origin": [ 314.810, 191.665, 227.555 ], "x_axis": [ 0.121, 0.501, -0.857 ], "y_axis": [ -0.957, 0.289, 0.034 ], "z_axis": [ 0.264, 0.816, 0.515 ], "quaternion": [ 0.694, -0.282, 0.404, 0.526 ] } }, { "index": 1360, "index_chain": 1360, "chain_name": "a", "nt_resnum": 1361, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1361", "linked_nts": [ "///a/1360", "///a/1362" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -82.962, "beta": 164.139, "gamma": 72.200, "delta": 78.903, "epsilon": -139.501, "zeta": -67.890, "epsilon_zeta": -71.612, "bb_type": "BI", "chi": -161.050, "glyco_bond": "anti", "C5prime_xyz": [ -1.423, 8.795, 0.574 ], "P_xyz": [ 1.063, 9.296, -0.005 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.872, "theta": -136.429, "eta_prime": 178.720, "theta_prime": -140.053, "eta_base": -124.431, "theta_base": -122.745, "v0": 1.832, "v1": -25.634, "v2": 38.384, "v3": -38.319, "v4": 23.001, "amplitude": 39.929, "phase_angle": 15.991, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.366, "filter_rmsd": 0.068, "frame": { "rmsd": 0.012, "origin": [ 316.552, 193.983, 227.485 ], "x_axis": [ -0.452, 0.640, -0.621 ], "y_axis": [ -0.746, 0.111, 0.657 ], "z_axis": [ 0.489, 0.760, 0.427 ], "quaternion": [ 0.521, -0.050, 0.533, 0.665 ] } }, { "index": 1361, "index_chain": 1361, "chain_name": "a", "nt_resnum": 1362, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1362", "linked_nts": [ "///a/1361", "///a/1363" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -70.625, "beta": 165.415, "gamma": 66.373, "delta": 75.239, "epsilon": -153.273, "zeta": -79.939, "epsilon_zeta": -73.334, "bb_type": "BI", "chi": -164.076, "glyco_bond": "anti", "C5prime_xyz": [ -2.170, 8.830, 0.634 ], "P_xyz": [ 0.137, 10.008, 0.429 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.376, "theta": -160.510, "eta_prime": -179.413, "theta_prime": -159.499, "eta_base": -143.162, "theta_base": -139.043, "v0": -6.700, "v1": -18.818, "v2": 35.619, "v3": -40.482, "v4": 29.791, "amplitude": 40.321, "phase_angle": 27.946, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.652, "filter_rmsd": 0.040, "frame": { "rmsd": 0.015, "origin": [ 318.558, 196.907, 226.692 ], "x_axis": [ -0.836, 0.421, -0.351 ], "y_axis": [ -0.421, -0.082, 0.903 ], "z_axis": [ 0.352, 0.903, 0.245 ], "quaternion": [ 0.286, 0.000, 0.614, 0.735 ] } }, { "index": 1362, "index_chain": 1362, "chain_name": "a", "nt_resnum": 1363, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1363", "linked_nts": [ "///a/1362", "///a/1364" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -57.235, "beta": 179.662, "gamma": 48.246, "delta": 81.354, "epsilon": -166.759, "zeta": -87.051, "epsilon_zeta": -79.708, "bb_type": "BI", "chi": -168.674, "glyco_bond": "anti", "C5prime_xyz": [ -1.738, 8.885, 0.934 ], "P_xyz": [ 0.527, 9.608, 2.016 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.178, "theta": -138.198, "eta_prime": -177.388, "theta_prime": -145.758, "eta_base": -149.094, "theta_base": -127.969, "v0": -8.389, "v1": -14.231, "v2": 30.045, "v3": -35.660, "v4": 27.820, "amplitude": 35.404, "phase_angle": 31.936, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.809, "filter_rmsd": 0.067, "frame": { "rmsd": 0.013, "origin": [ 320.598, 201.173, 225.599 ], "x_axis": [ -0.999, -0.032, -0.015 ], "y_axis": [ -0.001, -0.418, 0.908 ], "z_axis": [ -0.035, 0.908, 0.418 ], "quaternion": [ -0.009, -0.015, 0.539, 0.842 ] } }, { "index": 1363, "index_chain": 1363, "chain_name": "a", "nt_resnum": 1364, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1364", "linked_nts": [ "///a/1363", "///a/1365" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 132.865, "beta": -147.964, "gamma": -159.966, "delta": 82.635, "epsilon": -154.153, "zeta": -78.032, "epsilon_zeta": -76.122, "bb_type": "BI", "chi": -178.719, "glyco_bond": "anti", "C5prime_xyz": [ -1.146, 8.389, 1.642 ], "P_xyz": [ 0.282, 10.337, 0.672 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 179.230, "theta": -157.501, "eta_prime": -170.656, "theta_prime": -160.635, "eta_base": -134.730, "theta_base": -146.560, "v0": 3.373, "v1": -24.859, "v2": 35.855, "v3": -34.848, "v4": 19.929, "amplitude": 36.877, "phase_angle": 13.525, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.214, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 320.411, 205.157, 224.556 ], "x_axis": [ -0.881, 0.092, 0.464 ], "y_axis": [ 0.410, -0.342, 0.846 ], "z_axis": [ 0.236, 0.935, 0.264 ], "quaternion": [ -0.101, 0.222, 0.565, 0.789 ] } }, { "index": 1364, "index_chain": 1364, "chain_name": "a", "nt_resnum": 1365, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1365", "linked_nts": [ "///a/1364", "///a/1366" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 153.109, "beta": -164.124, "gamma": -178.875, "delta": 81.727, "epsilon": -113.244, "zeta": -68.454, "epsilon_zeta": -44.790, "bb_type": "--", "chi": -178.264, "glyco_bond": "anti", "C5prime_xyz": [ -1.189, 8.399, 1.618 ], "P_xyz": [ 0.436, 10.242, 0.766 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.203, "theta": -142.856, "eta_prime": 179.854, "theta_prime": -138.356, "eta_base": -153.435, "theta_base": -88.754, "v0": 4.251, "v1": -25.953, "v2": 36.698, "v3": -35.280, "v4": 19.578, "amplitude": 37.563, "phase_angle": 12.313, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.892, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 319.680, 208.968, 222.749 ], "x_axis": [ -0.611, 0.042, 0.791 ], "y_axis": [ 0.753, -0.276, 0.597 ], "z_axis": [ 0.244, 0.960, 0.137 ], "quaternion": [ -0.250, 0.363, 0.547, 0.711 ] } }, { "index": 1365, "index_chain": 1365, "chain_name": "a", "nt_resnum": 1366, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1366", "linked_nts": [ "///a/1365", "///a/1367" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -74.244, "beta": 169.376, "gamma": 54.254, "delta": 76.331, "epsilon": -138.495, "zeta": -59.877, "epsilon_zeta": -78.618, "bb_type": "BI", "chi": -155.803, "glyco_bond": "anti", "C5prime_xyz": [ -1.670, 8.793, 0.256 ], "P_xyz": [ 0.807, 9.511, 0.002 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 146.110, "theta": -131.029, "eta_prime": 169.829, "theta_prime": -127.296, "eta_base": -124.242, "theta_base": -79.071, "v0": 1.035, "v1": -25.557, "v2": 39.013, "v3": -39.454, "v4": 24.199, "amplitude": 40.829, "phase_angle": 17.153, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.366, "filter_rmsd": 0.106, "frame": { "rmsd": 0.012, "origin": [ 318.316, 211.436, 225.367 ], "x_axis": [ 0.104, -0.407, 0.908 ], "y_axis": [ 0.995, 0.033, -0.099 ], "z_axis": [ 0.011, 0.913, 0.408 ], "quaternion": [ 0.622, -0.407, -0.361, -0.564 ] } }, { "index": 1366, "index_chain": 1366, "chain_name": "a", "nt_resnum": 1367, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1367", "linked_nts": [ "///a/1366", "///a/1368" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -78.768, "beta": 162.976, "gamma": 80.875, "delta": 78.236, "epsilon": -154.432, "zeta": -81.942, "epsilon_zeta": -72.490, "bb_type": "BI", "chi": -152.116, "glyco_bond": "anti", "C5prime_xyz": [ -1.465, 8.783, 0.018 ], "P_xyz": [ 0.816, 9.266, -1.147 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.192, "theta": 174.913, "eta_prime": -167.695, "theta_prime": 159.423, "eta_base": -98.668, "theta_base": 151.575, "v0": 3.095, "v1": -26.671, "v2": 38.895, "v3": -38.121, "v4": 22.046, "amplitude": 40.129, "phase_angle": 14.250, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.092, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 319.583, 211.922, 229.876 ], "x_axis": [ 0.807, -0.244, 0.537 ], "y_axis": [ 0.559, 0.608, -0.564 ], "z_axis": [ -0.189, 0.756, 0.627 ], "quaternion": [ 0.872, -0.378, -0.208, -0.230 ] } }, { "index": 1367, "index_chain": 1367, "chain_name": "a", "nt_resnum": 1368, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1368", "linked_nts": [ "///a/1367", "///a/1369" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -116.761, "beta": 100.375, "gamma": 167.372, "delta": 80.713, "epsilon": -120.801, "zeta": -89.065, "epsilon_zeta": -31.736, "bb_type": "--", "chi": -178.251, "glyco_bond": "anti", "C5prime_xyz": [ -1.184, 8.288, 1.580 ], "P_xyz": [ -1.327, 10.640, 0.450 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -156.132, "theta": 167.814, "eta_prime": -179.222, "theta_prime": -173.518, "eta_base": 163.065, "theta_base": -126.293, "v0": 7.451, "v1": -29.491, "v2": 39.245, "v3": -35.935, "v4": 17.956, "amplitude": 39.630, "phase_angle": 7.988, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.807, "filter_rmsd": 0.039, "frame": { "rmsd": 0.015, "origin": [ 310.722, 218.774, 229.169 ], "x_axis": [ 0.114, -0.390, 0.914 ], "y_axis": [ 0.993, 0.050, -0.103 ], "z_axis": [ -0.005, 0.920, 0.393 ], "quaternion": [ 0.624, -0.410, -0.368, -0.554 ] } }, { "index": 1368, "index_chain": 1368, "chain_name": "a", "nt_resnum": 1369, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1369", "linked_nts": [ "///a/1368", "///a/1370" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -45.174, "beta": 153.129, "gamma": 50.207, "delta": 77.667, "epsilon": -136.259, "zeta": -68.891, "epsilon_zeta": -67.368, "bb_type": "BI", "chi": -165.875, "glyco_bond": "anti", "C5prime_xyz": [ -1.371, 8.601, 0.858 ], "P_xyz": [ 1.216, 8.821, 0.619 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.041, "theta": -131.338, "eta_prime": -175.896, "theta_prime": -130.601, "eta_base": -120.938, "theta_base": -94.722, "v0": 5.381, "v1": -29.090, "v2": 40.569, "v3": -38.500, "v4": 20.832, "amplitude": 41.365, "phase_angle": 11.261, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.344, "filter_rmsd": 0.040, "frame": { "rmsd": 0.012, "origin": [ 310.118, 220.837, 232.562 ], "x_axis": [ 0.750, -0.246, 0.614 ], "y_axis": [ 0.657, 0.390, -0.645 ], "z_axis": [ -0.081, 0.887, 0.454 ], "quaternion": [ 0.805, -0.476, -0.216, -0.280 ] } }, { "index": 1369, "index_chain": 1369, "chain_name": "a", "nt_resnum": 1370, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1370", "linked_nts": [ "///a/1369", "///a/1371" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end,multiplet", "alpha": -67.425, "beta": 170.897, "gamma": 61.789, "delta": 78.739, "epsilon": -156.129, "zeta": -82.066, "epsilon_zeta": -74.062, "bb_type": "BI", "chi": -160.047, "glyco_bond": "anti", "C5prime_xyz": [ -1.567, 8.745, 0.516 ], "P_xyz": [ 0.963, 9.322, 0.307 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.985, "theta": -160.145, "eta_prime": -175.959, "theta_prime": -163.270, "eta_base": -118.289, "theta_base": -156.273, "v0": 1.976, "v1": -25.940, "v2": 38.728, "v3": -38.511, "v4": 23.013, "amplitude": 40.238, "phase_angle": 15.747, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.811, "filter_rmsd": 0.104, "frame": { "rmsd": 0.012, "origin": [ 311.528, 222.139, 235.951 ], "x_axis": [ 0.997, -0.059, -0.046 ], "y_axis": [ 0.001, 0.623, -0.782 ], "z_axis": [ 0.075, 0.780, 0.622 ], "quaternion": [ 0.900, -0.434, 0.034, -0.017 ] } }, { "index": 1370, "index_chain": 1370, "chain_name": "a", "nt_resnum": 1371, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1371", "linked_nts": [ "///a/1370", "///a/1372" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -62.320, "beta": 166.072, "gamma": 53.424, "delta": 77.802, "epsilon": -146.508, "zeta": 176.779, "epsilon_zeta": 36.714, "bb_type": "--", "chi": -160.913, "glyco_bond": "anti", "C5prime_xyz": [ -1.429, 8.679, 0.517 ], "P_xyz": [ 1.131, 9.132, 0.262 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.434, "theta": 84.607, "eta_prime": 171.354, "theta_prime": 78.235, "eta_base": -168.486, "theta_base": 78.095, "v0": 3.531, "v1": -27.306, "v2": 39.519, "v3": -38.471, "v4": 21.922, "amplitude": 40.669, "phase_angle": 13.658, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.860, "filter_rmsd": 0.039, "frame": { "rmsd": 0.012, "origin": [ 311.074, 222.999, 238.921 ], "x_axis": [ 0.927, 0.145, -0.346 ], "y_axis": [ -0.333, 0.741, -0.582 ], "z_axis": [ 0.172, 0.655, 0.736 ], "quaternion": [ 0.922, -0.335, 0.140, 0.130 ] } }, { "index": 1371, "index_chain": 1371, "chain_name": "a", "nt_resnum": 1372, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1372", "linked_nts": [ "///a/1371", "///a/1373" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix,multiplet", "alpha": -125.728, "beta": 142.169, "gamma": 55.367, "delta": 79.362, "epsilon": -118.571, "zeta": -53.630, "epsilon_zeta": -64.941, "bb_type": "--", "chi": -153.208, "glyco_bond": "anti", "C5prime_xyz": [ -1.539, 8.858, 0.113 ], "P_xyz": [ 0.982, 9.012, -0.549 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 134.714, "theta": -100.208, "eta_prime": 138.036, "theta_prime": -97.499, "eta_base": 137.969, "theta_base": -62.799, "v0": -0.255, "v1": -22.872, "v2": 36.067, "v3": -37.167, "v4": 23.594, "amplitude": 38.137, "phase_angle": 18.964, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.067, "frame": { "rmsd": 0.008, "origin": [ 299.057, 231.520, 235.546 ], "x_axis": [ 0.006, -0.998, 0.061 ], "y_axis": [ 0.908, 0.031, 0.419 ], "z_axis": [ -0.420, 0.053, 0.906 ], "quaternion": [ 0.697, 0.131, -0.173, -0.684 ] } }, { "index": 1372, "index_chain": 1372, "chain_name": "a", "nt_resnum": 1373, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1373", "linked_nts": [ "///a/1372", "///a/1374" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": -68.961, "beta": 162.188, "gamma": 74.336, "delta": 76.900, "epsilon": -154.859, "zeta": -89.011, "epsilon_zeta": -65.849, "bb_type": "BI", "chi": -161.867, "glyco_bond": "anti", "C5prime_xyz": [ -1.690, 8.831, 0.585 ], "P_xyz": [ 0.725, 9.597, -0.070 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.208, "theta": -168.855, "eta_prime": -160.952, "theta_prime": -163.667, "eta_base": -97.287, "theta_base": -172.679, "v0": -1.597, "v1": -22.486, "v2": 36.683, "v3": -38.637, "v4": 25.354, "amplitude": 39.265, "phase_angle": 20.896, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.187, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 301.436, 225.684, 239.861 ], "x_axis": [ 0.933, -0.335, 0.129 ], "y_axis": [ 0.291, 0.917, 0.271 ], "z_axis": [ -0.209, -0.215, 0.954 ], "quaternion": [ 0.975, 0.125, -0.087, -0.161 ] } }, { "index": 1373, "index_chain": 1373, "chain_name": "a", "nt_resnum": 1374, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1374", "linked_nts": [ "///a/1373", "///a/1375" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -53.008, "beta": 177.123, "gamma": 62.886, "delta": 144.096, "epsilon": -86.208, "zeta": 118.263, "epsilon_zeta": 155.528, "bb_type": "--", "chi": -133.573, "glyco_bond": "anti", "C5prime_xyz": [ -2.319, 8.689, -0.585 ], "P_xyz": [ -0.115, 9.731, 0.330 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -144.146, "theta": 128.763, "eta_prime": -132.840, "theta_prime": 103.822, "eta_base": -149.370, "theta_base": 84.498, "v0": -25.617, "v1": 38.218, "v2": -35.503, "v3": 21.764, "v4": 2.131, "amplitude": 38.298, "phase_angle": 157.975, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.667, "filter_rmsd": 0.099, "frame": { "rmsd": 0.010, "origin": [ 298.060, 223.240, 242.200 ], "x_axis": [ 0.955, -0.100, -0.279 ], "y_axis": [ 0.191, 0.928, 0.321 ], "z_axis": [ 0.226, -0.360, 0.905 ], "quaternion": [ 0.973, 0.175, 0.130, -0.075 ] } }, { "index": 1374, "index_chain": 1374, "chain_name": "a", "nt_resnum": 1375, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1375", "linked_nts": [ "///a/1374", "///a/1376" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 174.092, "beta": -178.932, "gamma": 56.863, "delta": 81.902, "epsilon": -125.598, "zeta": -96.434, "epsilon_zeta": -29.164, "bb_type": "--", "chi": -155.157, "glyco_bond": "anti", "C5prime_xyz": [ -1.679, 8.817, 0.206 ], "P_xyz": [ 0.815, 9.588, 0.427 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 118.410, "theta": -146.840, "eta_prime": 105.970, "theta_prime": -139.736, "eta_base": 96.155, "theta_base": -100.644, "v0": -2.190, "v1": -19.697, "v2": 32.776, "v3": -34.957, "v4": 23.441, "amplitude": 35.366, "phase_angle": 22.067, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "6g", "suiteness": 0.071, "filter_rmsd": 0.102, "frame": { "rmsd": 0.005, "origin": [ 294.270, 230.905, 237.172 ], "x_axis": [ 0.903, -0.403, 0.147 ], "y_axis": [ -0.139, 0.051, 0.989 ], "z_axis": [ -0.406, -0.914, -0.010 ], "quaternion": [ 0.697, 0.682, -0.198, -0.095 ] } }, { "index": 1375, "index_chain": 1375, "chain_name": "a", "nt_resnum": 1376, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1376", "linked_nts": [ "///a/1375", "///a/1377" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -49.353, "beta": 148.812, "gamma": 53.617, "delta": 82.015, "epsilon": -140.046, "zeta": -72.610, "epsilon_zeta": -67.436, "bb_type": "BI", "chi": -162.336, "glyco_bond": "anti", "C5prime_xyz": [ -1.302, 8.753, 0.670 ], "P_xyz": [ 1.301, 8.819, 0.392 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.010, "theta": -132.713, "eta_prime": -176.737, "theta_prime": -132.079, "eta_base": -128.101, "theta_base": -107.171, "v0": 1.750, "v1": -23.760, "v2": 35.548, "v3": -35.429, "v4": 21.230, "amplitude": 36.961, "phase_angle": 15.892, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.334, "filter_rmsd": 0.070, "frame": { "rmsd": 0.010, "origin": [ 294.358, 225.884, 238.221 ], "x_axis": [ 0.669, 0.028, 0.743 ], "y_axis": [ -0.700, 0.361, 0.616 ], "z_axis": [ -0.251, -0.932, 0.261 ], "quaternion": [ 0.757, 0.511, -0.328, 0.240 ] } }, { "index": 1376, "index_chain": 1376, "chain_name": "a", "nt_resnum": 1377, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1377", "linked_nts": [ "///a/1376", "///a/1378" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-stack,non-canonical", "alpha": -61.089, "beta": -174.587, "gamma": 54.829, "delta": 79.557, "epsilon": -133.066, "zeta": -77.407, "epsilon_zeta": -55.659, "bb_type": "BI", "chi": -171.557, "glyco_bond": "anti", "C5prime_xyz": [ -1.254, 8.641, 1.226 ], "P_xyz": [ 1.226, 8.858, 2.043 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.482, "theta": -138.311, "eta_prime": -167.018, "theta_prime": -135.167, "eta_base": -129.852, "theta_base": -112.912, "v0": 2.012, "v1": -24.631, "v2": 36.741, "v3": -36.481, "v4": 21.729, "amplitude": 38.146, "phase_angle": 15.598, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.911, "filter_rmsd": 0.068, "frame": { "rmsd": 0.009, "origin": [ 294.550, 220.283, 241.671 ], "x_axis": [ 0.166, 0.605, 0.779 ], "y_axis": [ -0.832, 0.510, -0.219 ], "z_axis": [ -0.530, -0.612, 0.588 ], "quaternion": [ 0.752, 0.131, -0.435, 0.477 ] } }, { "index": 1377, "index_chain": 1377, "chain_name": "a", "nt_resnum": 1378, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1378", "linked_nts": [ "///a/1377", "///a/1379" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -55.495, "beta": 169.337, "gamma": 46.072, "delta": 74.990, "epsilon": -156.888, "zeta": -80.820, "epsilon_zeta": -76.068, "bb_type": "BI", "chi": -159.978, "glyco_bond": "anti", "C5prime_xyz": [ -1.639, 8.910, 0.472 ], "P_xyz": [ 0.829, 9.697, 0.770 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.247, "theta": -129.583, "eta_prime": 176.002, "theta_prime": -137.055, "eta_base": -147.017, "theta_base": -109.906, "v0": -2.430, "v1": -22.451, "v2": 37.471, "v3": -39.879, "v4": 26.643, "amplitude": 40.403, "phase_angle": 21.960, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.725, "filter_rmsd": 0.061, "frame": { "rmsd": 0.008, "origin": [ 294.654, 218.136, 244.621 ], "x_axis": [ -0.181, 0.886, 0.427 ], "y_axis": [ -0.856, 0.072, -0.512 ], "z_axis": [ -0.484, -0.459, 0.745 ], "quaternion": [ 0.639, -0.021, -0.356, 0.681 ] } }, { "index": 1378, "index_chain": 1378, "chain_name": "a", "nt_resnum": 1379, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1379", "linked_nts": [ "///a/1378", "///a/1380" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 135.055, "beta": -148.640, "gamma": -164.404, "delta": 81.383, "epsilon": -127.251, "zeta": -79.312, "epsilon_zeta": -47.938, "bb_type": "--", "chi": -174.100, "glyco_bond": "anti", "C5prime_xyz": [ -1.395, 8.562, 1.369 ], "P_xyz": [ -0.072, 10.466, 0.183 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.535, "theta": -164.032, "eta_prime": -175.254, "theta_prime": -157.961, "eta_base": -129.924, "theta_base": -124.320, "v0": 2.205, "v1": -24.086, "v2": 35.700, "v3": -35.397, "v4": 20.981, "amplitude": 37.015, "phase_angle": 15.314, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.391, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 294.763, 218.728, 248.178 ], "x_axis": [ -0.539, 0.838, 0.086 ], "y_axis": [ -0.747, -0.429, -0.507 ], "z_axis": [ -0.388, -0.338, 0.857 ], "quaternion": [ 0.471, -0.090, -0.251, 0.840 ] } }, { "index": 1379, "index_chain": 1379, "chain_name": "a", "nt_resnum": 1380, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1380", "linked_nts": [ "///a/1379", "///a/1381" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -47.747, "beta": 158.264, "gamma": 44.999, "delta": 75.697, "epsilon": -145.408, "zeta": -98.459, "epsilon_zeta": -46.950, "bb_type": "BI", "chi": -167.768, "glyco_bond": "anti", "C5prime_xyz": [ -1.903, 8.846, 0.890 ], "P_xyz": [ 0.531, 9.675, 1.277 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.479, "theta": -141.447, "eta_prime": -179.886, "theta_prime": -151.997, "eta_base": -133.338, "theta_base": -139.677, "v0": -5.840, "v1": -19.130, "v2": 35.414, "v3": -39.804, "v4": 28.826, "amplitude": 39.718, "phase_angle": 26.919, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.516, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 293.757, 219.621, 251.709 ], "x_axis": [ -0.798, 0.490, -0.350 ], "y_axis": [ -0.323, -0.839, -0.439 ], "z_axis": [ -0.509, -0.237, 0.827 ], "quaternion": [ 0.218, -0.231, -0.182, 0.931 ] } }, { "index": 1380, "index_chain": 1380, "chain_name": "a", "nt_resnum": 1381, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1381", "linked_nts": [ "///a/1380", "///a/1382" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 97.871, "beta": -147.043, "gamma": -133.595, "delta": 87.053, "epsilon": -113.744, "zeta": -79.777, "epsilon_zeta": -33.967, "bb_type": "--", "chi": -178.256, "glyco_bond": "anti", "C5prime_xyz": [ -0.882, 8.119, 1.686 ], "P_xyz": [ 0.319, 10.379, 1.284 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.671, "theta": -163.984, "eta_prime": 175.860, "theta_prime": -152.576, "eta_base": -157.566, "theta_base": -112.175, "v0": 11.662, "v1": -30.292, "v2": 36.589, "v3": -30.873, "v4": 12.187, "amplitude": 36.591, "phase_angle": 0.563, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 292.920, 221.320, 255.455 ], "x_axis": [ -0.819, 0.168, -0.548 ], "y_axis": [ -0.017, -0.963, -0.269 ], "z_axis": [ -0.573, -0.211, 0.792 ], "quaternion": [ 0.049, -0.297, -0.127, 0.945 ] } }, { "index": 1381, "index_chain": 1381, "chain_name": "a", "nt_resnum": 1382, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1382", "linked_nts": [ "///a/1381", "///a/1383" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -62.535, "beta": 156.054, "gamma": 64.210, "delta": 78.267, "epsilon": -134.391, "zeta": -79.006, "epsilon_zeta": -55.385, "bb_type": "BI", "chi": -150.573, "glyco_bond": "anti", "C5prime_xyz": [ -1.745, 8.886, -0.085 ], "P_xyz": [ 0.662, 9.445, -0.880 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.186, "theta": -144.308, "eta_prime": -176.443, "theta_prime": -149.755, "eta_base": -128.830, "theta_base": -140.586, "v0": -3.976, "v1": -20.187, "v2": 35.281, "v3": -38.571, "v4": 26.819, "amplitude": 38.731, "phase_angle": 24.367, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.314, "filter_rmsd": 0.063, "frame": { "rmsd": 0.009, "origin": [ 290.339, 222.303, 256.622 ], "x_axis": [ -0.725, -0.395, -0.565 ], "y_axis": [ 0.217, -0.909, 0.357 ], "z_axis": [ -0.654, 0.136, 0.744 ], "quaternion": [ -0.167, -0.332, 0.134, 0.919 ] } }, { "index": 1382, "index_chain": 1382, "chain_name": "a", "nt_resnum": 1383, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1383", "linked_nts": [ "///a/1382", "///a/1384" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -111.135, "beta": 156.362, "gamma": 97.447, "delta": 80.609, "epsilon": -143.482, "zeta": -62.152, "epsilon_zeta": -81.329, "bb_type": "BI", "chi": -153.250, "glyco_bond": "anti", "C5prime_xyz": [ -1.518, 8.834, 0.089 ], "P_xyz": [ 0.517, 9.419, -1.435 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.282, "theta": -135.702, "eta_prime": 166.256, "theta_prime": -138.994, "eta_base": -170.390, "theta_base": -108.873, "v0": -0.605, "v1": -22.336, "v2": 35.432, "v3": -36.716, "v4": 23.538, "amplitude": 37.578, "phase_angle": 19.457, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.067, "frame": { "rmsd": 0.012, "origin": [ 287.659, 223.360, 258.470 ], "x_axis": [ -0.297, -0.714, -0.634 ], "y_axis": [ 0.256, -0.699, 0.667 ], "z_axis": [ -0.920, 0.036, 0.391 ], "quaternion": [ -0.314, -0.503, 0.228, 0.773 ] } }, { "index": 1383, "index_chain": 1383, "chain_name": "a", "nt_resnum": 1384, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1384", "linked_nts": [ "///a/1383", "///a/1385" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -77.657, "beta": 179.655, "gamma": 65.358, "delta": 78.122, "epsilon": -148.622, "zeta": -71.996, "epsilon_zeta": -76.626, "bb_type": "BI", "chi": -163.775, "glyco_bond": "anti", "C5prime_xyz": [ -1.578, 8.742, 0.731 ], "P_xyz": [ 0.949, 9.427, 0.746 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.929, "theta": -147.635, "eta_prime": -174.581, "theta_prime": -147.092, "eta_base": -124.943, "theta_base": -124.990, "v0": 1.345, "v1": -25.270, "v2": 38.202, "v3": -38.373, "v4": 23.291, "amplitude": 39.863, "phase_angle": 16.600, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.664, "filter_rmsd": 0.106, "frame": { "rmsd": 0.012, "origin": [ 282.555, 220.731, 258.334 ], "x_axis": [ 0.279, -0.953, -0.116 ], "y_axis": [ 0.463, 0.028, 0.886 ], "z_axis": [ -0.842, -0.300, 0.449 ], "quaternion": [ 0.662, 0.448, -0.274, -0.534 ] } }, { "index": 1384, "index_chain": 1384, "chain_name": "a", "nt_resnum": 1385, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1385", "linked_nts": [ "///a/1384", "///a/1386" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -78.993, "beta": 173.348, "gamma": 69.114, "delta": 80.068, "epsilon": -150.972, "zeta": -75.061, "epsilon_zeta": -75.911, "bb_type": "BI", "chi": -157.329, "glyco_bond": "anti", "C5prime_xyz": [ -1.671, 8.817, 0.320 ], "P_xyz": [ 0.839, 9.514, 0.033 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.525, "theta": -151.015, "eta_prime": 179.867, "theta_prime": -153.440, "eta_base": -144.940, "theta_base": -127.422, "v0": -1.583, "v1": -21.511, "v2": 35.086, "v3": -36.905, "v4": 24.277, "amplitude": 37.560, "phase_angle": 20.909, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.529, "filter_rmsd": 0.102, "frame": { "rmsd": 0.014, "origin": [ 279.877, 218.935, 257.877 ], "x_axis": [ 0.596, -0.751, 0.285 ], "y_axis": [ 0.082, 0.410, 0.908 ], "z_axis": [ -0.799, -0.518, 0.306 ], "quaternion": [ 0.760, 0.469, -0.356, -0.274 ] } }, { "index": 1385, "index_chain": 1385, "chain_name": "a", "nt_resnum": 1386, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1386", "linked_nts": [ "///a/1385", "///a/1387" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -79.912, "beta": 170.470, "gamma": 65.174, "delta": 78.034, "epsilon": -135.368, "zeta": -72.434, "epsilon_zeta": -62.934, "bb_type": "BI", "chi": -170.469, "glyco_bond": "anti", "C5prime_xyz": [ -1.348, 8.648, 1.117 ], "P_xyz": [ 1.209, 9.134, 1.082 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.156, "theta": -136.559, "eta_prime": 173.596, "theta_prime": -132.856, "eta_base": -146.553, "theta_base": -94.108, "v0": 3.382, "v1": -27.438, "v2": 39.730, "v3": -38.731, "v4": 22.349, "amplitude": 40.928, "phase_angle": 13.900, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.651, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 277.205, 215.857, 258.334 ], "x_axis": [ 0.723, -0.273, 0.635 ], "y_axis": [ -0.230, 0.772, 0.593 ], "z_axis": [ -0.652, -0.575, 0.495 ], "quaternion": [ 0.864, 0.338, -0.372, -0.012 ] } }, { "index": 1386, "index_chain": 1386, "chain_name": "a", "nt_resnum": 1387, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1387", "linked_nts": [ "///a/1386", "///a/1388" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -59.703, "beta": 159.358, "gamma": 67.719, "delta": 77.873, "epsilon": -122.441, "zeta": -153.743, "epsilon_zeta": 31.301, "bb_type": "--", "chi": -148.110, "glyco_bond": "anti", "C5prime_xyz": [ -1.838, 8.798, -0.218 ], "P_xyz": [ 0.538, 9.362, -1.128 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.132, "theta": 174.523, "eta_prime": -163.917, "theta_prime": 147.817, "eta_base": -110.709, "theta_base": 77.551, "v0": -1.420, "v1": -22.967, "v2": 37.430, "v3": -39.235, "v4": 25.630, "amplitude": 39.989, "phase_angle": 20.608, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.584, "filter_rmsd": 0.110, "frame": { "rmsd": 0.012, "origin": [ 277.587, 213.149, 260.555 ], "x_axis": [ 0.330, 0.092, 0.939 ], "y_axis": [ -0.814, 0.532, 0.234 ], "z_axis": [ -0.478, -0.842, 0.250 ], "quaternion": [ 0.727, 0.370, -0.488, 0.312 ] } }, { "index": 1387, "index_chain": 1387, "chain_name": "a", "nt_resnum": 1388, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1388", "linked_nts": [ "///a/1387", "///a/1389" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-stack", "alpha": 133.574, "beta": -168.728, "gamma": 70.128, "delta": 147.210, "epsilon": -97.096, "zeta": -74.439, "epsilon_zeta": -22.656, "bb_type": "--", "chi": 34.440, "glyco_bond": "syn", "C5prime_xyz": [ -5.770, 4.589, -0.031 ], "P_xyz": [ -6.312, 2.500, -1.503 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 60.962, "theta": -52.663, "eta_prime": 77.255, "theta_prime": -72.234, "eta_base": 99.136, "theta_base": -30.606, "v0": -29.460, "v1": 42.657, "v2": -38.516, "v3": 22.597, "v4": 4.002, "amplitude": 42.260, "phase_angle": 155.701, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.019, "origin": [ 262.598, 217.143, 258.361 ], "x_axis": [ -0.661, 0.144, -0.736 ], "y_axis": [ 0.126, -0.946, -0.298 ], "z_axis": [ -0.740, -0.289, 0.607 ], "quaternion": [ 0.005, -0.412, -0.164, 0.896 ] } }, { "index": 1388, "index_chain": 1388, "chain_name": "a", "nt_resnum": 1389, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1389", "linked_nts": [ "///a/1388", "///a/1390" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-stack,canonical,helix,stem-end,multiplet", "alpha": -73.951, "beta": -164.467, "gamma": 53.985, "delta": 86.424, "epsilon": -131.445, "zeta": -77.828, "epsilon_zeta": -53.617, "bb_type": "BI", "chi": -162.654, "glyco_bond": "anti", "C5prime_xyz": [ -1.146, 8.669, 0.749 ], "P_xyz": [ 1.261, 8.753, 1.742 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.579, "theta": -131.861, "eta_prime": -154.381, "theta_prime": -120.914, "eta_base": -156.141, "theta_base": -104.306, "v0": 1.670, "v1": -22.271, "v2": 33.131, "v3": -33.080, "v4": 19.818, "amplitude": 34.441, "phase_angle": 15.854, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.970, "filter_rmsd": 0.078, "frame": { "rmsd": 0.022, "origin": [ 275.885, 210.685, 259.969 ], "x_axis": [ -0.380, 0.490, 0.785 ], "y_axis": [ -0.925, -0.203, -0.321 ], "z_axis": [ 0.001, -0.848, 0.530 ], "quaternion": [ 0.487, 0.270, -0.402, 0.727 ] } }, { "index": 1389, "index_chain": 1389, "chain_name": "a", "nt_resnum": 1390, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1390", "linked_nts": [ "///a/1389", "///a/1391" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -64.722, "beta": -177.485, "gamma": 64.197, "delta": 145.523, "epsilon": -90.818, "zeta": 98.058, "epsilon_zeta": 171.124, "bb_type": "--", "chi": -142.904, "glyco_bond": "anti", "C5prime_xyz": [ -2.104, 8.712, -0.070 ], "P_xyz": [ 0.052, 9.474, 1.210 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -159.051, "theta": 104.037, "eta_prime": -134.455, "theta_prime": 46.776, "eta_base": -117.838, "theta_base": -19.982, "v0": -25.157, "v1": 37.685, "v2": -35.205, "v3": 21.621, "v4": 1.920, "amplitude": 37.893, "phase_angle": 158.289, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.830, "filter_rmsd": 0.040, "frame": { "rmsd": 0.017, "origin": [ 276.121, 207.117, 263.991 ], "x_axis": [ -0.549, 0.828, 0.111 ], "y_axis": [ -0.569, -0.274, -0.775 ], "z_axis": [ -0.612, -0.489, 0.622 ], "quaternion": [ 0.447, -0.160, -0.404, 0.782 ] } }, { "index": 1390, "index_chain": 1390, "chain_name": "a", "nt_resnum": 1391, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1391", "linked_nts": [ "///a/1390", "///a/1392" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": 134.804, "beta": 107.783, "gamma": 67.256, "delta": 82.275, "epsilon": -153.983, "zeta": 58.296, "epsilon_zeta": 147.722, "bb_type": "--", "chi": -114.635, "glyco_bond": "anti", "C5prime_xyz": [ -2.235, 8.289, -2.032 ], "P_xyz": [ -0.505, 7.055, -3.559 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 17.661, "theta": -4.582, "eta_prime": 53.556, "theta_prime": -25.344, "eta_base": 111.951, "theta_base": 10.283, "v0": -3.441, "v1": -18.752, "v2": 32.423, "v3": -35.327, "v4": 24.557, "amplitude": 35.510, "phase_angle": 24.069, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.067, "frame": { "rmsd": 0.008, "origin": [ 268.383, 196.860, 254.205 ], "x_axis": [ -0.557, 0.779, 0.287 ], "y_axis": [ 0.821, 0.569, 0.049 ], "z_axis": [ -0.126, 0.263, -0.957 ], "quaternion": [ -0.118, 0.456, 0.878, 0.089 ] } }, { "index": 1391, "index_chain": 1391, "chain_name": "a", "nt_resnum": 1392, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1392", "linked_nts": [ "///a/1391", "///a/1393" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,non-stack,non-canonical,multiplet", "alpha": -121.837, "beta": -161.759, "gamma": 63.345, "delta": 78.922, "epsilon": -156.536, "zeta": -178.977, "epsilon_zeta": 22.441, "bb_type": "--", "chi": 25.411, "glyco_bond": "syn", "C5prime_xyz": [ -5.742, 4.110, -0.150 ], "P_xyz": [ -6.236, 1.598, -0.593 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.851, "theta": 98.124, "eta_prime": -155.479, "theta_prime": 117.419, "eta_base": -127.606, "theta_base": 112.965, "v0": -7.113, "v1": -17.269, "v2": 33.488, "v3": -38.613, "v4": 28.814, "amplitude": 38.310, "phase_angle": 29.060, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.044, "frame": { "rmsd": 0.026, "origin": [ 281.029, 201.391, 257.071 ], "x_axis": [ 0.547, 0.264, 0.794 ], "y_axis": [ -0.562, 0.819, 0.115 ], "z_axis": [ -0.621, -0.509, 0.596 ], "quaternion": [ 0.861, 0.181, -0.411, 0.240 ] } }, { "index": 1392, "index_chain": 1392, "chain_name": "a", "nt_resnum": 1393, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1393", "linked_nts": [ "///a/1392", "///a/1394" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix", "alpha": -50.658, "beta": 171.756, "gamma": 34.103, "delta": 142.611, "epsilon": -92.110, "zeta": 87.789, "epsilon_zeta": 180.101, "bb_type": "--", "chi": -144.451, "glyco_bond": "anti", "C5prime_xyz": [ -1.783, 8.822, -0.023 ], "P_xyz": [ 0.080, 9.676, 1.599 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -149.319, "theta": 124.297, "eta_prime": -159.062, "theta_prime": 74.164, "eta_base": -172.774, "theta_base": 33.938, "v0": -24.215, "v1": 36.301, "v2": -33.850, "v3": 20.766, "v4": 1.956, "amplitude": 36.462, "phase_angle": 158.182, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "3b", "suiteness": 0.380, "filter_rmsd": 0.063, "frame": { "rmsd": 0.013, "origin": [ 271.627, 214.415, 252.558 ], "x_axis": [ -0.042, -0.184, 0.982 ], "y_axis": [ 0.506, -0.852, -0.138 ], "z_axis": [ 0.862, 0.491, 0.129 ], "quaternion": [ -0.242, 0.648, 0.124, 0.711 ] } }, { "index": 1393, "index_chain": 1393, "chain_name": "a", "nt_resnum": 1394, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1394", "linked_nts": [ "///a/1393", "///a/1395" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": 60.311, "beta": 170.637, "gamma": 81.960, "delta": 148.046, "epsilon": -130.626, "zeta": -18.751, "epsilon_zeta": -111.874, "bb_type": "--", "chi": -147.661, "glyco_bond": "anti", "C5prime_xyz": [ -1.765, 8.746, 0.303 ], "P_xyz": [ 0.750, 9.001, 0.990 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 6.949, "theta": -16.975, "eta_prime": 26.581, "theta_prime": -42.054, "eta_base": 51.665, "theta_base": -21.757, "v0": -20.997, "v1": 35.631, "v2": -35.766, "v3": 24.600, "v4": -2.392, "amplitude": 37.040, "phase_angle": 164.932, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "6p", "suiteness": 0.133, "filter_rmsd": 0.063, "frame": { "rmsd": 0.004, "origin": [ 279.724, 200.710, 243.700 ], "x_axis": [ 0.896, 0.440, -0.069 ], "y_axis": [ -0.431, 0.896, 0.110 ], "z_axis": [ 0.110, -0.069, 0.992 ], "quaternion": [ 0.972, 0.046, 0.046, 0.224 ] } }, { "index": 1394, "index_chain": 1394, "chain_name": "a", "nt_resnum": 1395, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1395", "linked_nts": [ "///a/1394", "///a/1396" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix", "alpha": -108.693, "beta": -163.748, "gamma": 81.891, "delta": 80.619, "epsilon": -111.964, "zeta": -81.295, "epsilon_zeta": -30.668, "bb_type": "--", "chi": -178.272, "glyco_bond": "anti", "C5prime_xyz": [ -1.308, 8.471, 1.563 ], "P_xyz": [ 1.271, 8.594, 1.944 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.029, "theta": -123.888, "eta_prime": -145.761, "theta_prime": -117.630, "eta_base": -120.058, "theta_base": -68.055, "v0": 3.946, "v1": -27.027, "v2": 38.612, "v3": -37.250, "v4": 21.082, "amplitude": 39.622, "phase_angle": 12.965, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 269.185, 212.102, 250.545 ], "x_axis": [ -0.166, 0.300, -0.939 ], "y_axis": [ 0.450, -0.824, -0.343 ], "z_axis": [ -0.877, -0.480, 0.002 ], "quaternion": [ -0.053, -0.643, -0.291, 0.706 ] } }, { "index": 1395, "index_chain": 1395, "chain_name": "a", "nt_resnum": 1396, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1396", "linked_nts": [ "///a/1395", "///a/1397" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -60.934, "beta": 137.238, "gamma": 82.385, "delta": 80.434, "epsilon": -113.663, "zeta": -117.003, "epsilon_zeta": 3.340, "bb_type": "--", "chi": -150.894, "glyco_bond": "anti", "C5prime_xyz": [ -1.668, 8.837, -0.070 ], "P_xyz": [ 0.373, 9.037, -1.679 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.868, "theta": -117.237, "eta_prime": -160.678, "theta_prime": -123.219, "eta_base": -92.970, "theta_base": -79.551, "v0": -1.952, "v1": -21.744, "v2": 35.797, "v3": -37.861, "v4": 25.150, "amplitude": 38.453, "phase_angle": 21.419, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.350, "filter_rmsd": 0.065, "frame": { "rmsd": 0.013, "origin": [ 266.599, 211.552, 247.519 ], "x_axis": [ -0.140, -0.446, -0.884 ], "y_axis": [ 0.049, -0.895, 0.444 ], "z_axis": [ -0.989, 0.019, 0.147 ], "quaternion": [ -0.168, -0.634, 0.157, 0.738 ] } }, { "index": 1396, "index_chain": 1396, "chain_name": "a", "nt_resnum": 1397, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1397", "linked_nts": [ "///a/1396", "///a/1398" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": 116.348, "beta": -102.053, "gamma": -173.368, "delta": 83.802, "epsilon": -119.915, "zeta": -107.999, "epsilon_zeta": -11.916, "bb_type": "--", "chi": -154.435, "glyco_bond": "anti", "C5prime_xyz": [ -1.343, 8.782, 0.194 ], "P_xyz": [ -0.489, 9.124, -2.256 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.164, "theta": -178.272, "eta_prime": -165.647, "theta_prime": -175.809, "eta_base": -102.271, "theta_base": -168.776, "v0": 0.696, "v1": -22.149, "v2": 33.879, "v3": -34.386, "v4": 21.260, "amplitude": 35.516, "phase_angle": 17.463, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.068, "frame": { "rmsd": 0.011, "origin": [ 264.318, 208.238, 245.137 ], "x_axis": [ 0.034, -0.919, -0.394 ], "y_axis": [ -0.309, -0.384, 0.870 ], "z_axis": [ -0.950, 0.092, -0.297 ], "quaternion": [ 0.297, 0.655, -0.469, -0.513 ] } }, { "index": 1397, "index_chain": 1397, "chain_name": "a", "nt_resnum": 1398, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1398", "linked_nts": [ "///a/1397", "///a/1399" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": -60.142, "beta": 162.950, "gamma": 51.115, "delta": 81.059, "epsilon": -146.824, "zeta": -76.375, "epsilon_zeta": -70.449, "bb_type": "BI", "chi": -147.501, "glyco_bond": "anti", "C5prime_xyz": [ -1.635, 8.824, -0.221 ], "P_xyz": [ 0.916, 9.339, -0.501 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.233, "theta": -146.033, "eta_prime": 173.595, "theta_prime": -148.743, "eta_base": -175.758, "theta_base": -146.530, "v0": -0.440, "v1": -22.087, "v2": 34.933, "v3": -36.094, "v4": 23.044, "amplitude": 36.996, "phase_angle": 19.224, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.157, "filter_rmsd": 0.065, "frame": { "rmsd": 0.013, "origin": [ 259.124, 209.736, 243.060 ], "x_axis": [ 0.359, -0.932, -0.052 ], "y_axis": [ -0.218, -0.138, 0.966 ], "z_axis": [ -0.907, -0.336, -0.253 ], "quaternion": [ 0.492, 0.661, -0.435, -0.363 ] } }, { "index": 1398, "index_chain": 1398, "chain_name": "a", "nt_resnum": 1399, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1399", "linked_nts": [ "///a/1398", "///a/1400" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -66.128, "beta": 171.818, "gamma": 52.553, "delta": 76.263, "epsilon": -164.421, "zeta": -82.990, "epsilon_zeta": -81.431, "bb_type": "BI", "chi": -142.709, "glyco_bond": "anti", "C5prime_xyz": [ -2.122, 8.856, -0.618 ], "P_xyz": [ 0.186, 9.925, -1.185 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.279, "theta": -171.978, "eta_prime": 172.236, "theta_prime": -174.200, "eta_base": -172.842, "theta_base": -165.918, "v0": -6.434, "v1": -18.920, "v2": 35.501, "v3": -40.133, "v4": 29.389, "amplitude": 40.047, "phase_angle": 27.565, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.922, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 256.509, 208.917, 240.704 ], "x_axis": [ 0.493, -0.823, 0.283 ], "y_axis": [ -0.466, 0.024, 0.885 ], "z_axis": [ -0.735, -0.568, -0.371 ], "quaternion": [ 0.535, 0.678, -0.475, -0.167 ] } }, { "index": 1399, "index_chain": 1399, "chain_name": "a", "nt_resnum": 1400, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1400", "linked_nts": [ "///a/1399", "///a/1401" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -66.556, "beta": 158.954, "gamma": 69.195, "delta": 75.819, "epsilon": -141.128, "zeta": -58.412, "epsilon_zeta": -82.716, "bb_type": "BI", "chi": -159.217, "glyco_bond": "anti", "C5prime_xyz": [ -1.834, 8.838, 0.431 ], "P_xyz": [ 0.549, 9.661, -0.249 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.380, "theta": -129.805, "eta_prime": 177.577, "theta_prime": -128.984, "eta_base": -167.081, "theta_base": -82.687, "v0": -1.782, "v1": -23.059, "v2": 37.773, "v3": -39.774, "v4": 26.187, "amplitude": 40.467, "phase_angle": 21.025, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.463, "filter_rmsd": 0.102, "frame": { "rmsd": 0.009, "origin": [ 253.772, 207.373, 237.624 ], "x_axis": [ 0.436, -0.752, 0.494 ], "y_axis": [ -0.570, 0.194, 0.799 ], "z_axis": [ -0.697, -0.630, -0.344 ], "quaternion": [ 0.567, 0.630, -0.525, -0.080 ] } }, { "index": 1400, "index_chain": 1400, "chain_name": "a", "nt_resnum": 1401, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1401", "linked_nts": [ "///a/1400", "///a/1402" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix", "alpha": -64.325, "beta": -178.135, "gamma": 49.888, "delta": 82.387, "epsilon": -149.098, "zeta": -65.245, "epsilon_zeta": -83.852, "bb_type": "BI", "chi": -147.146, "glyco_bond": "anti", "C5prime_xyz": [ -1.444, 8.861, -0.292 ], "P_xyz": [ 1.105, 9.526, -0.256 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.472, "theta": -139.038, "eta_prime": -171.423, "theta_prime": -137.131, "eta_base": -107.769, "theta_base": -107.169, "v0": -1.424, "v1": -22.506, "v2": 36.404, "v3": -38.233, "v4": 25.054, "amplitude": 38.902, "phase_angle": 20.641, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.804, "filter_rmsd": 0.063, "frame": { "rmsd": 0.001, "origin": [ 253.312, 202.813, 239.363 ], "x_axis": [ -0.054, -0.126, 0.991 ], "y_axis": [ -0.841, 0.540, 0.023 ], "z_axis": [ -0.538, -0.832, -0.135 ], "quaternion": [ 0.581, 0.368, -0.657, 0.308 ] } }, { "index": 1401, "index_chain": 1401, "chain_name": "a", "nt_resnum": 1402, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1402", "linked_nts": [ "///a/1401", "///a/1403" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -63.412, "beta": -171.487, "gamma": 33.530, "delta": 84.400, "epsilon": -151.950, "zeta": -66.573, "epsilon_zeta": -85.377, "bb_type": "BI", "chi": -159.084, "glyco_bond": "anti", "C5prime_xyz": [ -1.362, 8.718, 0.444 ], "P_xyz": [ 1.002, 9.408, 1.385 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.291, "theta": -144.540, "eta_prime": 174.704, "theta_prime": -139.266, "eta_base": -143.016, "theta_base": -102.055, "v0": 2.645, "v1": -25.441, "v2": 37.098, "v3": -36.607, "v4": 21.461, "amplitude": 38.356, "phase_angle": 14.714, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.370, "filter_rmsd": 0.038, "frame": { "rmsd": 0.002, "origin": [ 251.208, 199.176, 241.174 ], "x_axis": [ -0.113, 0.686, 0.719 ], "y_axis": [ -0.590, 0.536, -0.604 ], "z_axis": [ -0.800, -0.492, 0.344 ], "quaternion": [ 0.665, -0.042, -0.571, 0.480 ] } }, { "index": 1402, "index_chain": 1402, "chain_name": "a", "nt_resnum": 1403, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1403", "linked_nts": [ "///a/1402", "///a/1404" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -76.009, "beta": -179.326, "gamma": 57.108, "delta": 82.068, "epsilon": -151.393, "zeta": -86.210, "epsilon_zeta": -65.182, "bb_type": "BI", "chi": -143.357, "glyco_bond": "anti", "C5prime_xyz": [ -1.387, 8.813, -0.506 ], "P_xyz": [ 1.182, 9.293, -0.849 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.029, "theta": -157.441, "eta_prime": -179.248, "theta_prime": -157.536, "eta_base": -132.141, "theta_base": -140.420, "v0": 0.231, "v1": -23.974, "v2": 37.182, "v3": -38.032, "v4": 23.882, "amplitude": 39.149, "phase_angle": 18.238, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.860, "filter_rmsd": 0.063, "frame": { "rmsd": 0.002, "origin": [ 249.476, 198.542, 243.708 ], "x_axis": [ -0.390, 0.900, 0.194 ], "y_axis": [ -0.630, -0.107, -0.770 ], "z_axis": [ -0.672, -0.422, 0.608 ], "quaternion": [ 0.527, -0.165, -0.411, 0.726 ] } }, { "index": 1403, "index_chain": 1403, "chain_name": "a", "nt_resnum": 1404, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1404", "linked_nts": [ "///a/1403", "///a/1405" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -51.384, "beta": 161.553, "gamma": 48.415, "delta": 76.833, "epsilon": -115.711, "zeta": -90.536, "epsilon_zeta": -25.175, "bb_type": "--", "chi": -166.683, "glyco_bond": "anti", "C5prime_xyz": [ -1.466, 8.653, 0.900 ], "P_xyz": [ 1.091, 9.129, 1.080 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.520, "theta": -144.096, "eta_prime": -178.827, "theta_prime": -141.186, "eta_base": -154.887, "theta_base": -113.728, "v0": 2.257, "v1": -25.994, "v2": 38.664, "v3": -38.398, "v4": 22.757, "amplitude": 40.115, "phase_angle": 15.457, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.690, "filter_rmsd": 0.038, "frame": { "rmsd": 0.010, "origin": [ 246.668, 196.911, 247.061 ], "x_axis": [ -0.318, 0.903, -0.289 ], "y_axis": [ -0.313, -0.388, -0.867 ], "z_axis": [ -0.895, -0.185, 0.406 ], "quaternion": [ 0.418, -0.407, -0.362, 0.727 ] } }, { "index": 1404, "index_chain": 1404, "chain_name": "a", "nt_resnum": 1405, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1405", "linked_nts": [ "///a/1404", "///a/1406" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -69.705, "beta": 137.561, "gamma": 79.578, "delta": 75.937, "epsilon": -135.569, "zeta": -88.410, "epsilon_zeta": -47.159, "bb_type": "BI", "chi": -154.234, "glyco_bond": "anti", "C5prime_xyz": [ -1.556, 8.883, 0.167 ], "P_xyz": [ 0.559, 9.233, -1.299 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.780, "theta": -151.912, "eta_prime": 177.385, "theta_prime": -155.231, "eta_base": -142.132, "theta_base": -138.504, "v0": -0.797, "v1": -23.544, "v2": 37.733, "v3": -39.201, "v4": 25.195, "amplitude": 40.087, "phase_angle": 19.730, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.397, "filter_rmsd": 0.066, "frame": { "rmsd": 0.010, "origin": [ 244.604, 197.839, 248.510 ], "x_axis": [ -0.392, 0.637, -0.664 ], "y_axis": [ -0.462, -0.760, -0.457 ], "z_axis": [ -0.796, 0.127, 0.592 ], "quaternion": [ 0.332, -0.441, -0.100, 0.828 ] } }, { "index": 1405, "index_chain": 1405, "chain_name": "a", "nt_resnum": 1406, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1406", "linked_nts": [ "///a/1405", "///a/1407" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -52.213, "beta": 155.201, "gamma": 61.878, "delta": 74.438, "epsilon": -116.179, "zeta": -89.415, "epsilon_zeta": -26.764, "bb_type": "--", "chi": -153.375, "glyco_bond": "anti", "C5prime_xyz": [ -1.642, 8.905, 0.103 ], "P_xyz": [ 0.788, 9.472, -0.632 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.756, "theta": -147.206, "eta_prime": -172.594, "theta_prime": -149.425, "eta_base": -145.936, "theta_base": -126.757, "v0": -1.244, "v1": -23.737, "v2": 38.381, "v3": -40.126, "v4": 26.068, "amplitude": 40.923, "phase_angle": 20.302, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.533, "filter_rmsd": 0.063, "frame": { "rmsd": 0.010, "origin": [ 241.411, 199.832, 250.643 ], "x_axis": [ -0.462, 0.235, -0.855 ], "y_axis": [ -0.322, -0.943, -0.085 ], "z_axis": [ -0.826, 0.236, 0.511 ], "quaternion": [ 0.163, -0.492, 0.044, 0.854 ] } }, { "index": 1406, "index_chain": 1406, "chain_name": "a", "nt_resnum": 1407, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1407", "linked_nts": [ "///a/1406", "///a/1408" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -81.105, "beta": 135.474, "gamma": 84.749, "delta": 77.081, "epsilon": -142.633, "zeta": -69.026, "epsilon_zeta": -73.607, "bb_type": "BI", "chi": 179.959, "glyco_bond": "anti", "C5prime_xyz": [ -1.618, 8.485, 1.635 ], "P_xyz": [ 0.718, 9.247, 0.766 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.682, "theta": -139.618, "eta_prime": 168.541, "theta_prime": -143.973, "eta_base": -152.114, "theta_base": -110.370, "v0": 0.129, "v1": -24.584, "v2": 38.355, "v3": -39.293, "v4": 24.632, "amplitude": 40.416, "phase_angle": 18.376, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.119, "filter_rmsd": 0.044, "frame": { "rmsd": 0.014, "origin": [ 237.743, 201.371, 251.445 ], "x_axis": [ -0.040, -0.311, -0.950 ], "y_axis": [ -0.058, -0.948, 0.313 ], "z_axis": [ -0.998, 0.067, 0.020 ], "quaternion": [ -0.089, -0.687, 0.134, 0.708 ] } }, { "index": 1407, "index_chain": 1407, "chain_name": "a", "nt_resnum": 1408, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1408", "linked_nts": [ "///a/1407", "///a/1409" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -83.384, "beta": 179.299, "gamma": 69.087, "delta": 83.091, "epsilon": -161.521, "zeta": -86.342, "epsilon_zeta": -75.179, "bb_type": "BI", "chi": -159.710, "glyco_bond": "anti", "C5prime_xyz": [ -1.457, 8.707, 0.496 ], "P_xyz": [ 1.121, 9.156, 0.376 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.228, "theta": -165.496, "eta_prime": -177.938, "theta_prime": -166.593, "eta_base": -123.114, "theta_base": -151.379, "v0": 1.755, "v1": -24.019, "v2": 35.890, "v3": -35.726, "v4": 21.425, "amplitude": 37.310, "phase_angle": 15.858, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.465, "filter_rmsd": 0.106, "frame": { "rmsd": 0.013, "origin": [ 234.997, 202.252, 249.364 ], "x_axis": [ -0.096, -0.864, -0.495 ], "y_axis": [ -0.182, -0.473, 0.862 ], "z_axis": [ -0.979, 0.173, -0.112 ], "quaternion": [ 0.282, 0.610, -0.428, -0.604 ] } }, { "index": 1408, "index_chain": 1408, "chain_name": "a", "nt_resnum": 1409, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1409", "linked_nts": [ "///a/1408", "///a/1410" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -70.587, "beta": 176.152, "gamma": 61.727, "delta": 80.423, "epsilon": -140.813, "zeta": -68.115, "epsilon_zeta": -72.698, "bb_type": "BI", "chi": -173.670, "glyco_bond": "anti", "C5prime_xyz": [ -1.087, 8.448, 1.322 ], "P_xyz": [ 1.522, 8.570, 1.521 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.791, "theta": -135.511, "eta_prime": 177.085, "theta_prime": -133.779, "eta_base": -160.714, "theta_base": -109.380, "v0": 7.040, "v1": -29.373, "v2": 39.527, "v3": -36.418, "v4": 18.529, "amplitude": 39.983, "phase_angle": 8.663, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.710, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 230.925, 205.106, 248.082 ], "x_axis": [ -0.018, -0.990, -0.143 ], "y_axis": [ 0.043, -0.143, 0.989 ], "z_axis": [ -0.999, 0.011, 0.045 ], "quaternion": [ -0.470, -0.520, 0.455, 0.549 ] } }, { "index": 1409, "index_chain": 1409, "chain_name": "a", "nt_resnum": 1410, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1410", "linked_nts": [ "///a/1409", "///a/1411" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -69.056, "beta": 171.738, "gamma": 70.538, "delta": 79.679, "epsilon": -139.436, "zeta": -56.671, "epsilon_zeta": -82.764, "bb_type": "BI", "chi": 179.797, "glyco_bond": "anti", "C5prime_xyz": [ -1.573, 8.551, 1.632 ], "P_xyz": [ 0.949, 9.073, 2.041 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.236, "theta": -124.359, "eta_prime": -167.053, "theta_prime": -122.554, "eta_base": -123.988, "theta_base": -71.441, "v0": -0.538, "v1": -23.029, "v2": 36.467, "v3": -37.732, "v4": 24.149, "amplitude": 38.648, "phase_angle": 19.339, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.518, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 226.955, 203.652, 246.203 ], "x_axis": [ 0.133, -0.885, 0.446 ], "y_axis": [ 0.162, 0.463, 0.871 ], "z_axis": [ -0.978, -0.044, 0.205 ], "quaternion": [ 0.671, 0.341, -0.530, -0.390 ] } }, { "index": 1410, "index_chain": 1410, "chain_name": "a", "nt_resnum": 1411, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1411", "linked_nts": [ "///a/1410", "///a/1412" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -78.219, "beta": 174.481, "gamma": 66.144, "delta": 78.995, "epsilon": -130.249, "zeta": -131.093, "epsilon_zeta": 0.843, "bb_type": "--", "chi": -147.319, "glyco_bond": "anti", "C5prime_xyz": [ -1.609, 8.844, -0.279 ], "P_xyz": [ 0.871, 9.438, -0.880 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.001, "theta": 164.683, "eta_prime": -170.321, "theta_prime": 175.453, "eta_base": -99.569, "theta_base": 168.051, "v0": -0.554, "v1": -23.155, "v2": 36.732, "v3": -38.027, "v4": 24.330, "amplitude": 38.937, "phase_angle": 19.375, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.590, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 224.776, 200.694, 248.130 ], "x_axis": [ -0.046, -0.228, 0.973 ], "y_axis": [ -0.277, 0.938, 0.207 ], "z_axis": [ -0.960, -0.260, -0.106 ], "quaternion": [ 0.668, 0.175, -0.723, 0.018 ] } }, { "index": 1411, "index_chain": 1411, "chain_name": "a", "nt_resnum": 1412, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1412", "linked_nts": [ "///a/1411", "///a/1413" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -66.490, "beta": 173.547, "gamma": 32.848, "delta": 87.127, "epsilon": -111.007, "zeta": -66.903, "epsilon_zeta": -44.104, "bb_type": "--", "chi": -147.929, "glyco_bond": "anti", "C5prime_xyz": [ -1.222, 8.682, -0.144 ], "P_xyz": [ 1.295, 9.160, 0.439 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.489, "theta": -111.137, "eta_prime": 161.334, "theta_prime": -99.802, "eta_base": 142.538, "theta_base": -78.308, "v0": 1.301, "v1": -20.716, "v2": 31.059, "v3": -31.192, "v4": 18.896, "amplitude": 32.371, "phase_angle": 16.366, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "7a", "suiteness": 0.485, "filter_rmsd": 0.043, "frame": { "rmsd": 0.017, "origin": [ 219.263, 200.478, 242.142 ], "x_axis": [ 0.711, -0.251, 0.656 ], "y_axis": [ -0.108, 0.884, 0.455 ], "z_axis": [ -0.695, -0.394, 0.602 ], "quaternion": [ 0.894, 0.238, -0.378, -0.040 ] } }, { "index": 1412, "index_chain": 1412, "chain_name": "a", "nt_resnum": 1413, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1413", "linked_nts": [ "///a/1412", "///a/1414" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -67.251, "beta": 125.015, "gamma": 122.555, "delta": 81.144, "epsilon": -157.161, "zeta": -80.436, "epsilon_zeta": -76.724, "bb_type": "BI", "chi": -164.095, "glyco_bond": "anti", "C5prime_xyz": [ -1.520, 8.774, 0.738 ], "P_xyz": [ -0.236, 9.879, -1.250 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -164.442, "theta": -146.612, "eta_prime": -130.360, "theta_prime": -156.391, "eta_base": -90.266, "theta_base": -118.690, "v0": -0.661, "v1": -21.504, "v2": 34.227, "v3": -35.588, "v4": 22.876, "amplitude": 36.344, "phase_angle": 19.654, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 218.561, 199.169, 249.940 ], "x_axis": [ 0.208, 0.424, 0.882 ], "y_axis": [ -0.548, 0.797, -0.254 ], "z_axis": [ -0.810, -0.430, 0.398 ], "quaternion": [ 0.775, 0.057, -0.546, 0.313 ] } }, { "index": 1413, "index_chain": 1413, "chain_name": "a", "nt_resnum": 1414, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1414", "linked_nts": [ "///a/1413", "///a/1415" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 163.702, "beta": -150.621, "gamma": 156.022, "delta": 78.219, "epsilon": -122.736, "zeta": -82.117, "epsilon_zeta": -40.619, "bb_type": "--", "chi": -162.776, "glyco_bond": "anti", "C5prime_xyz": [ -1.419, 8.696, 0.729 ], "P_xyz": [ 0.423, 9.663, -0.830 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.771, "theta": -146.187, "eta_prime": 172.990, "theta_prime": -147.183, "eta_base": -130.410, "theta_base": -120.526, "v0": 2.234, "v1": -25.290, "v2": 37.701, "v3": -37.438, "v4": 22.186, "amplitude": 39.117, "phase_angle": 15.464, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.224, "filter_rmsd": 0.108, "frame": { "rmsd": 0.011, "origin": [ 217.549, 198.244, 252.723 ], "x_axis": [ -0.155, 0.816, 0.558 ], "y_axis": [ -0.778, 0.247, -0.578 ], "z_axis": [ -0.609, -0.523, 0.596 ], "quaternion": [ 0.650, -0.021, -0.449, 0.613 ] } }, { "index": 1414, "index_chain": 1414, "chain_name": "a", "nt_resnum": 1415, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1415", "linked_nts": [ "///a/1414", "///a/1416" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -47.912, "beta": 167.906, "gamma": 38.608, "delta": 75.462, "epsilon": -150.514, "zeta": -73.710, "epsilon_zeta": -76.804, "bb_type": "BI", "chi": -173.943, "glyco_bond": "anti", "C5prime_xyz": [ -1.802, 8.659, 1.276 ], "P_xyz": [ 0.568, 9.385, 2.066 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.484, "theta": -154.003, "eta_prime": 173.852, "theta_prime": -150.822, "eta_base": -142.193, "theta_base": -129.847, "v0": -0.308, "v1": -24.876, "v2": 39.228, "v3": -40.458, "v4": 25.639, "amplitude": 41.484, "phase_angle": 18.982, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.356, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 214.953, 197.841, 257.205 ], "x_axis": [ -0.157, 0.964, -0.216 ], "y_axis": [ -0.382, -0.261, -0.886 ], "z_axis": [ -0.910, -0.057, 0.410 ], "quaternion": [ 0.498, -0.417, -0.349, 0.676 ] } }, { "index": 1415, "index_chain": 1415, "chain_name": "a", "nt_resnum": 1416, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1416", "linked_nts": [ "///a/1415", "///a/1417" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -67.805, "beta": 166.603, "gamma": 68.931, "delta": 75.247, "epsilon": -156.461, "zeta": -78.583, "epsilon_zeta": -77.877, "bb_type": "BI", "chi": -167.387, "glyco_bond": "anti", "C5prime_xyz": [ -1.779, 8.767, 0.847 ], "P_xyz": [ 0.656, 9.636, 0.427 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.718, "theta": -159.274, "eta_prime": -176.077, "theta_prime": -160.546, "eta_base": -141.646, "theta_base": -141.471, "v0": 0.232, "v1": -25.841, "v2": 40.248, "v3": -40.958, "v4": 25.631, "amplitude": 42.346, "phase_angle": 18.112, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.544, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 213.314, 198.919, 260.431 ], "x_axis": [ -0.461, 0.739, -0.491 ], "y_axis": [ -0.398, -0.667, -0.629 ], "z_axis": [ -0.793, -0.094, 0.602 ], "quaternion": [ 0.344, -0.389, -0.219, 0.826 ] } }, { "index": 1416, "index_chain": 1416, "chain_name": "a", "nt_resnum": 1417, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1417", "linked_nts": [ "///a/1416", "///a/1418" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem", "alpha": -59.636, "beta": 163.113, "gamma": 68.731, "delta": 79.904, "epsilon": -145.525, "zeta": -81.442, "epsilon_zeta": -64.083, "bb_type": "BI", "chi": -165.326, "glyco_bond": "anti", "C5prime_xyz": [ -1.430, 8.796, 0.817 ], "P_xyz": [ 1.136, 9.296, 0.573 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.959, "theta": -119.705, "eta_prime": -168.812, "theta_prime": -131.545, "eta_base": -139.059, "theta_base": -114.487, "v0": -1.016, "v1": -21.676, "v2": 34.907, "v3": -36.448, "v4": 23.676, "amplitude": 37.188, "phase_angle": 20.170, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.548, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 211.696, 200.454, 263.290 ], "x_axis": [ -0.640, 0.351, -0.684 ], "y_axis": [ -0.235, -0.936, -0.261 ], "z_axis": [ -0.732, -0.007, 0.681 ], "quaternion": [ 0.162, -0.392, -0.074, 0.902 ] } }, { "index": 1417, "index_chain": 1417, "chain_name": "a", "nt_resnum": 1418, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1418", "linked_nts": [ "///a/1417", "///a/1419" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 111.941, "beta": -148.812, "gamma": -140.395, "delta": 84.282, "epsilon": -105.033, "zeta": -34.165, "epsilon_zeta": -70.868, "bb_type": "--", "chi": -171.836, "glyco_bond": "anti", "C5prime_xyz": [ -1.219, 8.477, 1.278 ], "P_xyz": [ -0.312, 10.740, 0.361 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.313, "theta": -139.466, "eta_prime": -171.477, "theta_prime": -140.192, "eta_base": -133.709, "theta_base": -102.232, "v0": 4.408, "v1": -25.446, "v2": 35.698, "v3": -34.119, "v4": 18.734, "amplitude": 36.472, "phase_angle": 11.824, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.109, "frame": { "rmsd": 0.011, "origin": [ 208.837, 203.194, 264.572 ], "x_axis": [ -0.707, -0.091, -0.701 ], "y_axis": [ -0.012, -0.990, 0.141 ], "z_axis": [ -0.707, 0.108, 0.699 ], "quaternion": [ -0.022, -0.382, 0.068, 0.921 ] } }, { "index": 1418, "index_chain": 1418, "chain_name": "a", "nt_resnum": 1419, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1419", "linked_nts": [ "///a/1418", "///a/1420" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -110.895, "beta": 94.368, "gamma": 156.211, "delta": 82.437, "epsilon": -152.374, "zeta": -74.894, "epsilon_zeta": -77.481, "bb_type": "BI", "chi": -166.479, "glyco_bond": "anti", "C5prime_xyz": [ -1.297, 8.632, 0.932 ], "P_xyz": [ -1.364, 10.361, -1.017 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.697, "theta": -179.436, "eta_prime": -168.018, "theta_prime": -172.957, "eta_base": -115.607, "theta_base": -152.901, "v0": 1.688, "v1": -22.992, "v2": 34.405, "v3": -34.311, "v4": 20.561, "amplitude": 35.776, "phase_angle": 15.914, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.108, "frame": { "rmsd": 0.011, "origin": [ 205.420, 204.132, 263.888 ], "x_axis": [ -0.674, -0.508, -0.536 ], "y_axis": [ 0.054, -0.758, 0.650 ], "z_axis": [ -0.737, 0.409, 0.539 ], "quaternion": [ -0.163, -0.369, 0.307, 0.862 ] } }, { "index": 1419, "index_chain": 1419, "chain_name": "a", "nt_resnum": 1420, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1420", "linked_nts": [ "///a/1419", "///a/1421" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 170.848, "beta": -171.162, "gamma": 166.650, "delta": 81.309, "epsilon": -118.422, "zeta": -76.141, "epsilon_zeta": -42.282, "bb_type": "--", "chi": -169.845, "glyco_bond": "anti", "C5prime_xyz": [ -1.355, 8.611, 1.136 ], "P_xyz": [ 0.268, 10.267, -0.058 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.407, "theta": -148.691, "eta_prime": 177.632, "theta_prime": -142.826, "eta_base": -153.235, "theta_base": -89.586, "v0": 1.921, "v1": -23.727, "v2": 35.371, "v3": -35.256, "v4": 21.006, "amplitude": 36.743, "phase_angle": 15.707, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.559, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 201.862, 206.963, 263.699 ], "x_axis": [ -0.491, -0.836, -0.244 ], "y_axis": [ 0.281, -0.417, 0.864 ], "z_axis": [ -0.825, 0.356, 0.440 ], "quaternion": [ -0.365, -0.349, 0.398, 0.766 ] } }, { "index": 1420, "index_chain": 1420, "chain_name": "a", "nt_resnum": 1421, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1421", "linked_nts": [ "///a/1420", "///a/1422" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -54.868, "beta": 153.856, "gamma": 53.619, "delta": 77.635, "epsilon": -133.593, "zeta": -89.176, "epsilon_zeta": -44.417, "bb_type": "BI", "chi": -158.186, "glyco_bond": "anti", "C5prime_xyz": [ -1.582, 8.884, 0.381 ], "P_xyz": [ 0.960, 9.386, 0.069 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.550, "theta": -150.190, "eta_prime": -178.049, "theta_prime": -150.645, "eta_base": -109.423, "theta_base": -134.963, "v0": -1.599, "v1": -22.420, "v2": 36.565, "v3": -38.439, "v4": 25.309, "amplitude": 39.135, "phase_angle": 20.879, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.448, "filter_rmsd": 0.062, "frame": { "rmsd": 0.009, "origin": [ 198.390, 205.086, 264.344 ], "x_axis": [ 0.013, -0.907, 0.420 ], "y_axis": [ 0.351, 0.398, 0.848 ], "z_axis": [ -0.936, 0.136, 0.324 ], "quaternion": [ 0.659, 0.270, -0.515, -0.478 ] } }, { "index": 1421, "index_chain": 1421, "chain_name": "a", "nt_resnum": 1422, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1422", "linked_nts": [ "///a/1421", "///a/1423" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -61.829, "beta": 152.638, "gamma": 58.009, "delta": 75.933, "epsilon": -131.367, "zeta": -37.149, "epsilon_zeta": -94.218, "bb_type": "--", "chi": -153.676, "glyco_bond": "anti", "C5prime_xyz": [ -1.755, 8.819, 0.110 ], "P_xyz": [ 0.711, 9.354, -0.528 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.558, "theta": -119.900, "eta_prime": 172.326, "theta_prime": -134.998, "eta_base": -159.691, "theta_base": -131.333, "v0": -0.638, "v1": -23.932, "v2": 38.223, "v3": -39.593, "v4": 25.318, "amplitude": 40.545, "phase_angle": 19.482, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.587, "filter_rmsd": 0.103, "frame": { "rmsd": 0.009, "origin": [ 195.479, 204.693, 264.525 ], "x_axis": [ 0.349, -0.670, 0.655 ], "y_axis": [ 0.091, 0.720, 0.688 ], "z_axis": [ -0.933, -0.181, 0.312 ], "quaternion": [ 0.771, 0.282, -0.515, -0.247 ] } }, { "index": 1422, "index_chain": 1422, "chain_name": "a", "nt_resnum": 1423, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1423", "linked_nts": [ "///a/1422", "///a/1424" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -124.794, "beta": 104.646, "gamma": 165.872, "delta": 78.367, "epsilon": -142.803, "zeta": -104.684, "epsilon_zeta": -38.119, "bb_type": "BI", "chi": -170.540, "glyco_bond": "anti", "C5prime_xyz": [ -1.218, 8.682, 1.155 ], "P_xyz": [ -1.290, 10.829, -0.340 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -175.887, "theta": 175.835, "eta_prime": -172.986, "theta_prime": -171.863, "eta_base": -152.079, "theta_base": -129.531, "v0": 1.248, "v1": -24.600, "v2": 37.492, "v3": -37.638, "v4": 22.915, "amplitude": 39.151, "phase_angle": 16.739, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.048, "filter_rmsd": 0.067, "frame": { "rmsd": 0.010, "origin": [ 192.533, 201.301, 265.108 ], "x_axis": [ 0.477, -0.443, 0.759 ], "y_axis": [ -0.057, 0.847, 0.529 ], "z_axis": [ -0.877, -0.295, 0.379 ], "quaternion": [ 0.822, 0.251, -0.498, -0.117 ] } }, { "index": 1423, "index_chain": 1423, "chain_name": "a", "nt_resnum": 1424, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1424", "linked_nts": [ "///a/1423", "///a/1425" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 157.620, "beta": -128.356, "gamma": 164.369, "delta": 81.581, "epsilon": -119.627, "zeta": -67.934, "epsilon_zeta": -51.693, "bb_type": "--", "chi": -165.125, "glyco_bond": "anti", "C5prime_xyz": [ -1.274, 8.749, 0.841 ], "P_xyz": [ 0.622, 9.320, -0.841 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.375, "theta": -126.865, "eta_prime": -178.612, "theta_prime": -126.996, "eta_base": -128.937, "theta_base": -74.889, "v0": 0.382, "v1": -22.608, "v2": 35.032, "v3": -35.760, "v4": 22.289, "amplitude": 36.838, "phase_angle": 18.013, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.080, "filter_rmsd": 0.067, "frame": { "rmsd": 0.010, "origin": [ 191.181, 198.882, 266.901 ], "x_axis": [ 0.355, 0.125, 0.926 ], "y_axis": [ -0.571, 0.814, 0.109 ], "z_axis": [ -0.740, -0.567, 0.360 ], "quaternion": [ 0.795, 0.213, -0.524, 0.219 ] } }, { "index": 1424, "index_chain": 1424, "chain_name": "a", "nt_resnum": 1425, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1425", "linked_nts": [ "///a/1424", "///a/1426" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -62.878, "beta": 157.962, "gamma": 62.401, "delta": 85.110, "epsilon": -123.656, "zeta": -74.616, "epsilon_zeta": -49.040, "bb_type": "--", "chi": -150.061, "glyco_bond": "anti", "C5prime_xyz": [ -1.377, 8.705, -0.031 ], "P_xyz": [ 1.182, 8.910, -0.531 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.227, "theta": -122.369, "eta_prime": -166.583, "theta_prime": -116.128, "eta_base": -94.749, "theta_base": -87.014, "v0": 1.321, "v1": -22.028, "v2": 33.136, "v3": -33.306, "v4": 20.216, "amplitude": 34.556, "phase_angle": 16.482, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.481, "filter_rmsd": 0.037, "frame": { "rmsd": 0.014, "origin": [ 189.593, 199.666, 271.696 ], "x_axis": [ -0.195, 0.848, 0.494 ], "y_axis": [ -0.798, 0.156, -0.583 ], "z_axis": [ -0.571, -0.507, 0.646 ], "quaternion": [ 0.634, -0.030, -0.420, 0.649 ] } }, { "index": 1425, "index_chain": 1425, "chain_name": "a", "nt_resnum": 1426, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1426", "linked_nts": [ "///a/1425", "///a/1427" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -67.531, "beta": 179.569, "gamma": 61.005, "delta": 143.135, "epsilon": -149.562, "zeta": 144.215, "epsilon_zeta": 66.223, "bb_type": "--", "chi": -101.315, "glyco_bond": "anti", "C5prime_xyz": [ -2.031, 8.054, -2.161 ], "P_xyz": [ 0.513, 8.632, -2.450 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.490, "theta": 125.638, "eta_prime": -156.831, "theta_prime": 109.602, "eta_base": -119.735, "theta_base": 135.736, "v0": -20.299, "v1": 32.520, "v2": -31.659, "v3": 20.812, "v4": -0.497, "amplitude": 33.273, "phase_angle": 162.080, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.701, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 187.039, 200.433, 273.823 ], "x_axis": [ -0.241, 0.885, -0.397 ], "y_axis": [ -0.811, -0.409, -0.419 ], "z_axis": [ -0.534, 0.221, 0.816 ], "quaternion": [ 0.540, -0.296, -0.063, 0.785 ] } }, { "index": 1426, "index_chain": 1426, "chain_name": "a", "nt_resnum": 1427, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1427", "linked_nts": [ "///a/1426", "///a/1428" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -74.305, "beta": 145.563, "gamma": 46.025, "delta": 81.197, "epsilon": -98.449, "zeta": -120.214, "epsilon_zeta": 21.765, "bb_type": "--", "chi": -174.122, "glyco_bond": "anti", "C5prime_xyz": [ -1.432, 8.532, 1.354 ], "P_xyz": [ 1.162, 8.590, 1.619 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -176.539, "theta": -105.259, "eta_prime": 172.814, "theta_prime": -112.245, "eta_base": 178.308, "theta_base": -73.878, "v0": 1.463, "v1": -23.828, "v2": 35.898, "v3": -36.013, "v4": 21.857, "amplitude": 37.426, "phase_angle": 16.429, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.788, "filter_rmsd": 0.040, "frame": { "rmsd": 0.013, "origin": [ 187.941, 190.756, 277.414 ], "x_axis": [ -0.030, 0.951, 0.309 ], "y_axis": [ -0.766, 0.177, -0.618 ], "z_axis": [ -0.642, -0.255, 0.723 ], "quaternion": [ 0.684, -0.133, -0.348, 0.628 ] } }, { "index": 1427, "index_chain": 1427, "chain_name": "a", "nt_resnum": 1428, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1428", "linked_nts": [ "///a/1427", "///a/1429" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 110.199, "beta": -111.261, "gamma": -175.217, "delta": 80.167, "epsilon": -117.384, "zeta": -70.058, "epsilon_zeta": -47.325, "bb_type": "--", "chi": -165.631, "glyco_bond": "anti", "C5prime_xyz": [ -1.234, 8.552, 0.847 ], "P_xyz": [ -0.201, 9.446, -1.378 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 149.568, "theta": -137.193, "eta_prime": 176.094, "theta_prime": -137.457, "eta_base": -121.674, "theta_base": -90.762, "v0": 5.552, "v1": -27.846, "v2": 38.434, "v3": -36.207, "v4": 19.328, "amplitude": 39.101, "phase_angle": 10.600, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.038, "frame": { "rmsd": 0.015, "origin": [ 186.071, 192.741, 280.086 ], "x_axis": [ -0.481, 0.866, -0.135 ], "y_axis": [ -0.774, -0.492, -0.398 ], "z_axis": [ -0.411, -0.087, 0.907 ], "quaternion": [ 0.483, -0.161, -0.143, 0.849 ] } }, { "index": 1428, "index_chain": 1428, "chain_name": "a", "nt_resnum": 1429, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1429", "linked_nts": [ "///a/1428", "///a/1430" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -58.691, "beta": 161.651, "gamma": 58.288, "delta": 79.847, "epsilon": -145.438, "zeta": -76.554, "epsilon_zeta": -68.884, "bb_type": "BI", "chi": -156.807, "glyco_bond": "anti", "C5prime_xyz": [ -1.562, 8.887, 0.288 ], "P_xyz": [ 0.989, 9.412, 0.084 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.831, "theta": -146.769, "eta_prime": -172.595, "theta_prime": -148.407, "eta_base": -104.478, "theta_base": -125.143, "v0": -3.687, "v1": -19.708, "v2": 34.261, "v3": -37.320, "v4": 25.877, "amplitude": 37.534, "phase_angle": 24.104, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.470, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 182.512, 195.811, 281.022 ], "x_axis": [ -0.745, 0.094, -0.660 ], "y_axis": [ -0.225, -0.968, 0.115 ], "z_axis": [ -0.628, 0.234, 0.742 ], "quaternion": [ 0.086, -0.346, 0.094, 0.929 ] } }, { "index": 1429, "index_chain": 1429, "chain_name": "a", "nt_resnum": 1430, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1430", "linked_nts": [ "///a/1429", "///a/1431" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -71.775, "beta": 162.329, "gamma": 63.287, "delta": 79.236, "epsilon": -142.345, "zeta": -69.389, "epsilon_zeta": -72.955, "bb_type": "BI", "chi": -152.241, "glyco_bond": "anti", "C5prime_xyz": [ -1.704, 8.803, 0.037 ], "P_xyz": [ 0.760, 9.385, -0.562 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.654, "theta": -139.101, "eta_prime": 176.359, "theta_prime": -141.686, "eta_base": -146.038, "theta_base": -111.379, "v0": -0.599, "v1": -22.655, "v2": 35.989, "v3": -37.332, "v4": 23.909, "amplitude": 38.175, "phase_angle": 19.482, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.780, "filter_rmsd": 0.105, "frame": { "rmsd": 0.012, "origin": [ 180.522, 197.359, 282.405 ], "x_axis": [ -0.692, -0.398, -0.602 ], "y_axis": [ -0.018, -0.825, 0.565 ], "z_axis": [ -0.722, 0.402, 0.564 ], "quaternion": [ -0.108, -0.377, 0.276, 0.878 ] } }, { "index": 1430, "index_chain": 1430, "chain_name": "a", "nt_resnum": 1431, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1431", "linked_nts": [ "///a/1430", "///a/1432" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -74.089, "beta": 167.228, "gamma": 63.152, "delta": 75.261, "epsilon": -150.136, "zeta": -74.142, "epsilon_zeta": -75.995, "bb_type": "BI", "chi": -171.636, "glyco_bond": "anti", "C5prime_xyz": [ -1.596, 8.628, 1.151 ], "P_xyz": [ 0.899, 9.355, 1.120 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.328, "theta": -153.133, "eta_prime": 175.748, "theta_prime": -152.950, "eta_base": -133.989, "theta_base": -134.530, "v0": 1.002, "v1": -26.012, "v2": 39.811, "v3": -40.237, "v4": 24.707, "amplitude": 41.675, "phase_angle": 17.201, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.748, "filter_rmsd": 0.039, "frame": { "rmsd": 0.011, "origin": [ 175.982, 198.190, 283.056 ], "x_axis": [ -0.252, -0.911, -0.326 ], "y_axis": [ 0.465, -0.410, 0.785 ], "z_axis": [ -0.849, 0.046, 0.527 ], "quaternion": [ -0.465, -0.397, 0.281, 0.740 ] } }, { "index": 1431, "index_chain": 1431, "chain_name": "a", "nt_resnum": 1432, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1432", "linked_nts": [ "///a/1431", "///a/1433" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -66.631, "beta": 169.852, "gamma": 65.150, "delta": 77.236, "epsilon": -144.084, "zeta": -66.749, "epsilon_zeta": -77.336, "bb_type": "BI", "chi": -172.713, "glyco_bond": "anti", "C5prime_xyz": [ -1.667, 8.692, 1.213 ], "P_xyz": [ 0.839, 9.390, 1.383 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.577, "theta": -139.686, "eta_prime": -175.630, "theta_prime": -138.459, "eta_base": -144.226, "theta_base": -96.341, "v0": -0.706, "v1": -23.680, "v2": 37.703, "v3": -39.102, "v4": 25.106, "amplitude": 40.013, "phase_angle": 19.563, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.699, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 172.061, 198.798, 282.583 ], "x_axis": [ 0.045, -0.998, 0.035 ], "y_axis": [ 0.508, 0.053, 0.860 ], "z_axis": [ -0.860, -0.021, 0.509 ], "quaternion": [ 0.634, 0.348, -0.353, -0.594 ] } }, { "index": 1432, "index_chain": 1432, "chain_name": "a", "nt_resnum": 1433, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1433", "linked_nts": [ "///a/1432", "///a/1434" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -72.403, "beta": 169.095, "gamma": 65.500, "delta": 77.706, "epsilon": -143.798, "zeta": -51.513, "epsilon_zeta": -92.285, "bb_type": "BI", "chi": -162.757, "glyco_bond": "anti", "C5prime_xyz": [ -1.443, 8.813, 0.658 ], "P_xyz": [ 1.106, 9.357, 0.436 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.615, "theta": -128.354, "eta_prime": -176.011, "theta_prime": -133.207, "eta_base": -115.366, "theta_base": -104.513, "v0": 0.627, "v1": -24.610, "v2": 37.948, "v3": -38.506, "v4": 23.850, "amplitude": 39.818, "phase_angle": 17.632, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.703, "filter_rmsd": 0.065, "frame": { "rmsd": 0.010, "origin": [ 169.297, 196.367, 283.308 ], "x_axis": [ 0.332, -0.697, 0.635 ], "y_axis": [ 0.211, 0.712, 0.670 ], "z_axis": [ -0.919, -0.088, 0.384 ], "quaternion": [ 0.779, 0.243, -0.499, -0.291 ] } }, { "index": 1433, "index_chain": 1433, "chain_name": "a", "nt_resnum": 1434, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1434", "linked_nts": [ "///a/1433", "///a/1435" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": -120.402, "beta": 147.666, "gamma": 129.413, "delta": 83.572, "epsilon": -165.338, "zeta": -108.166, "epsilon_zeta": -57.172, "bb_type": "BI", "chi": -169.508, "glyco_bond": "anti", "C5prime_xyz": [ -1.508, 8.702, 1.072 ], "P_xyz": [ 0.239, 10.090, -0.316 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.803, "theta": 145.252, "eta_prime": -164.151, "theta_prime": 147.510, "eta_base": -114.430, "theta_base": 134.313, "v0": -2.116, "v1": -18.976, "v2": 31.556, "v3": -33.683, "v4": 22.578, "amplitude": 34.054, "phase_angle": 22.083, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.108, "frame": { "rmsd": 0.011, "origin": [ 167.422, 193.519, 284.860 ], "x_axis": [ 0.424, -0.211, 0.881 ], "y_axis": [ -0.198, 0.927, 0.318 ], "z_axis": [ -0.884, -0.309, 0.352 ], "quaternion": [ 0.822, 0.190, -0.536, -0.004 ] } }, { "index": 1434, "index_chain": 1434, "chain_name": "a", "nt_resnum": 1435, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1435", "linked_nts": [ "///a/1434", "///a/1436" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -87.944, "beta": -165.885, "gamma": 45.894, "delta": 77.583, "epsilon": -141.218, "zeta": -48.141, "epsilon_zeta": -93.077, "bb_type": "BI", "chi": -154.927, "glyco_bond": "anti", "C5prime_xyz": [ -2.174, 8.899, 0.100 ], "P_xyz": [ -0.073, 10.316, 0.758 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.140, "theta": -124.311, "eta_prime": 145.298, "theta_prime": -110.663, "eta_base": 122.513, "theta_base": -70.205, "v0": -7.064, "v1": -16.951, "v2": 32.936, "v3": -37.941, "v4": 28.414, "amplitude": 37.701, "phase_angle": 29.121, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "&a", "suiteness": 0.479, "filter_rmsd": 0.038, "frame": { "rmsd": 0.008, "origin": [ 162.715, 194.166, 276.092 ], "x_axis": [ 0.835, -0.369, 0.407 ], "y_axis": [ -0.160, 0.545, 0.823 ], "z_axis": [ -0.526, -0.753, 0.396 ], "quaternion": [ 0.833, 0.473, -0.280, -0.063 ] } }, { "index": 1435, "index_chain": 1435, "chain_name": "a", "nt_resnum": 1436, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1436", "linked_nts": [ "///a/1435", "///a/1437" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -82.674, "beta": 165.220, "gamma": 86.359, "delta": 84.400, "epsilon": -120.394, "zeta": -90.013, "epsilon_zeta": -30.381, "bb_type": "--", "chi": -178.949, "glyco_bond": "anti", "C5prime_xyz": [ -1.257, 8.344, 1.659 ], "P_xyz": [ 1.326, 8.645, 1.321 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.887, "theta": -138.001, "eta_prime": -147.391, "theta_prime": -138.218, "eta_base": -86.985, "theta_base": -108.473, "v0": 5.912, "v1": -26.450, "v2": 35.887, "v3": -33.415, "v4": 17.377, "amplitude": 36.383, "phase_angle": 9.473, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.010, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 163.545, 191.111, 284.742 ], "x_axis": [ 0.075, 0.622, 0.779 ], "y_axis": [ -0.695, 0.593, -0.407 ], "z_axis": [ -0.715, -0.511, 0.476 ], "quaternion": [ 0.732, 0.036, -0.510, 0.450 ] } }, { "index": 1436, "index_chain": 1436, "chain_name": "a", "nt_resnum": 1437, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1437", "linked_nts": [ "///a/1436", "///a/1438" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -60.733, "beta": 158.532, "gamma": 53.542, "delta": 81.819, "epsilon": -149.054, "zeta": -79.239, "epsilon_zeta": -69.815, "bb_type": "BI", "chi": -164.811, "glyco_bond": "anti", "C5prime_xyz": [ -1.286, 8.636, 0.837 ], "P_xyz": [ 1.328, 8.773, 0.805 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.358, "theta": -147.159, "eta_prime": 175.330, "theta_prime": -149.988, "eta_base": -135.037, "theta_base": -139.932, "v0": 3.537, "v1": -25.577, "v2": 36.725, "v3": -35.531, "v4": 20.146, "amplitude": 37.726, "phase_angle": 13.225, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.455, "filter_rmsd": 0.110, "frame": { "rmsd": 0.011, "origin": [ 162.053, 189.677, 287.495 ], "x_axis": [ -0.294, 0.918, 0.267 ], "y_axis": [ -0.661, 0.006, -0.750 ], "z_axis": [ -0.690, -0.397, 0.605 ], "quaternion": [ 0.574, -0.154, -0.417, 0.688 ] } }, { "index": 1437, "index_chain": 1437, "chain_name": "a", "nt_resnum": 1438, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1438", "linked_nts": [ "///a/1437", "///a/1439" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -62.057, "beta": 162.806, "gamma": 61.075, "delta": 79.608, "epsilon": -148.615, "zeta": -67.435, "epsilon_zeta": -81.179, "bb_type": "BI", "chi": -158.464, "glyco_bond": "anti", "C5prime_xyz": [ -1.523, 8.844, 0.406 ], "P_xyz": [ 1.032, 9.344, 0.109 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.859, "theta": -139.688, "eta_prime": -178.666, "theta_prime": -140.245, "eta_base": -152.198, "theta_base": -113.465, "v0": 0.570, "v1": -23.725, "v2": 36.565, "v3": -37.113, "v4": 23.086, "amplitude": 38.380, "phase_angle": 17.696, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.843, "filter_rmsd": 0.062, "frame": { "rmsd": 0.008, "origin": [ 161.667, 188.685, 290.281 ], "x_axis": [ -0.563, 0.825, -0.040 ], "y_axis": [ -0.619, -0.453, -0.642 ], "z_axis": [ -0.548, -0.337, 0.766 ], "quaternion": [ 0.433, -0.176, -0.293, 0.834 ] } }, { "index": 1438, "index_chain": 1438, "chain_name": "a", "nt_resnum": 1439, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1439", "linked_nts": [ "///a/1438", "///a/1440" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -70.033, "beta": 168.373, "gamma": 70.361, "delta": 80.211, "epsilon": -148.123, "zeta": -118.564, "epsilon_zeta": -29.558, "bb_type": "BI", "chi": -149.733, "glyco_bond": "anti", "C5prime_xyz": [ -1.831, 8.874, -0.153 ], "P_xyz": [ 0.609, 9.633, -0.737 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.260, "theta": 155.756, "eta_prime": -168.346, "theta_prime": 139.986, "eta_base": -127.009, "theta_base": 131.692, "v0": -5.548, "v1": -17.631, "v2": 32.683, "v3": -36.788, "v4": 26.678, "amplitude": 36.700, "phase_angle": 27.059, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.526, "filter_rmsd": 0.100, "frame": { "rmsd": 0.008, "origin": [ 159.673, 189.540, 293.277 ], "x_axis": [ -0.804, 0.464, -0.372 ], "y_axis": [ -0.338, -0.871, -0.356 ], "z_axis": [ -0.489, -0.160, 0.857 ], "quaternion": [ 0.213, -0.229, -0.137, 0.940 ] } }, { "index": 1439, "index_chain": 1439, "chain_name": "a", "nt_resnum": 1440, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1440", "linked_nts": [ "///a/1439", "///a/1441" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -35.375, "beta": -137.254, "gamma": -87.266, "delta": 81.579, "epsilon": -148.191, "zeta": -69.785, "epsilon_zeta": -78.406, "bb_type": "BI", "chi": -175.439, "glyco_bond": "anti", "C5prime_xyz": [ -1.484, 8.488, 1.413 ], "P_xyz": [ -1.674, 11.063, 1.782 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 113.185, "theta": 162.842, "eta_prime": 88.811, "theta_prime": -171.394, "eta_base": 74.352, "theta_base": -143.429, "v0": 2.246, "v1": -24.704, "v2": 36.437, "v3": -36.129, "v4": 21.344, "amplitude": 37.763, "phase_angle": 15.226, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.010, "origin": [ 166.823, 177.769, 300.531 ], "x_axis": [ 0.669, 0.349, -0.657 ], "y_axis": [ -0.732, 0.156, -0.663 ], "z_axis": [ -0.129, 0.924, 0.360 ], "quaternion": [ 0.739, -0.537, 0.179, 0.366 ] } }, { "index": 1440, "index_chain": 1440, "chain_name": "a", "nt_resnum": 1441, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1441", "linked_nts": [ "///a/1440", "///a/1442" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical", "alpha": -69.852, "beta": -168.076, "gamma": 72.066, "delta": 144.046, "epsilon": -117.510, "zeta": -63.866, "epsilon_zeta": -53.644, "bb_type": "--", "chi": -106.530, "glyco_bond": "anti", "C5prime_xyz": [ -2.335, 8.184, -1.891 ], "P_xyz": [ 0.119, 9.096, -1.985 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -160.134, "theta": -57.400, "eta_prime": -135.779, "theta_prime": -77.200, "eta_base": -123.041, "theta_base": -40.793, "v0": -23.034, "v1": 35.496, "v2": -33.766, "v3": 21.350, "v4": 0.870, "amplitude": 35.959, "phase_angle": 159.891, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.610, "filter_rmsd": 0.039, "frame": { "rmsd": 0.013, "origin": [ 168.274, 179.777, 302.141 ], "x_axis": [ 0.251, 0.396, -0.883 ], "y_axis": [ -0.915, 0.394, -0.084 ], "z_axis": [ 0.315, 0.830, 0.461 ], "quaternion": [ 0.726, -0.315, 0.413, 0.452 ] } }, { "index": 1441, "index_chain": 1441, "chain_name": "a", "nt_resnum": 1442, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1442", "linked_nts": [ "///a/1441", "///a/1443" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-stack,canonical,helix,stem-end", "alpha": -91.384, "beta": -176.029, "gamma": 52.619, "delta": 82.064, "epsilon": -141.061, "zeta": -72.483, "epsilon_zeta": -68.578, "bb_type": "BI", "chi": -162.500, "glyco_bond": "anti", "C5prime_xyz": [ -1.252, 8.730, 0.694 ], "P_xyz": [ 1.267, 9.057, 1.304 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 139.328, "theta": -139.477, "eta_prime": -177.896, "theta_prime": -137.662, "eta_base": -143.057, "theta_base": -113.289, "v0": 1.961, "v1": -23.925, "v2": 35.608, "v3": -35.425, "v4": 21.097, "amplitude": 36.974, "phase_angle": 15.618, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.572, "filter_rmsd": 0.069, "frame": { "rmsd": 0.011, "origin": [ 157.760, 188.325, 300.741 ], "x_axis": [ -0.253, -0.802, -0.541 ], "y_axis": [ 0.377, -0.597, 0.708 ], "z_axis": [ -0.891, -0.025, 0.453 ], "quaternion": [ -0.388, -0.472, 0.225, 0.759 ] } }, { "index": 1442, "index_chain": 1442, "chain_name": "a", "nt_resnum": 1443, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1443", "linked_nts": [ "///a/1442", "///a/1444" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -66.740, "beta": -177.906, "gamma": 43.626, "delta": 77.240, "epsilon": -141.234, "zeta": -67.804, "epsilon_zeta": -73.430, "bb_type": "BI", "chi": -163.513, "glyco_bond": "anti", "C5prime_xyz": [ -1.352, 8.776, 0.722 ], "P_xyz": [ 1.103, 9.356, 1.407 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.517, "theta": -140.959, "eta_prime": 171.178, "theta_prime": -132.994, "eta_base": -151.693, "theta_base": -93.918, "v0": 2.420, "v1": -26.227, "v2": 38.783, "v3": -38.348, "v4": 22.641, "amplitude": 40.182, "phase_angle": 15.160, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.788, "filter_rmsd": 0.069, "frame": { "rmsd": 0.011, "origin": [ 153.591, 188.062, 300.936 ], "x_axis": [ 0.360, -0.904, -0.232 ], "y_axis": [ 0.475, -0.036, 0.879 ], "z_axis": [ -0.803, -0.427, 0.416 ], "quaternion": [ 0.659, 0.495, -0.216, -0.523 ] } }, { "index": 1443, "index_chain": 1443, "chain_name": "a", "nt_resnum": 1444, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1444", "linked_nts": [ "///a/1443", "///a/1445" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -68.462, "beta": 165.529, "gamma": 75.024, "delta": 82.317, "epsilon": -117.614, "zeta": -100.009, "epsilon_zeta": -17.605, "bb_type": "--", "chi": -173.492, "glyco_bond": "anti", "C5prime_xyz": [ -1.139, 8.500, 1.319 ], "P_xyz": [ 1.459, 8.759, 1.081 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -176.958, "theta": -163.587, "eta_prime": -158.881, "theta_prime": 166.054, "eta_base": -108.263, "theta_base": 108.651, "v0": 4.534, "v1": -25.955, "v2": 36.371, "v3": -34.743, "v4": 19.114, "amplitude": 37.155, "phase_angle": 11.792, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.316, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 150.978, 183.373, 302.276 ], "x_axis": [ 0.633, -0.613, 0.473 ], "y_axis": [ 0.154, 0.698, 0.699 ], "z_axis": [ -0.759, -0.370, 0.536 ], "quaternion": [ 0.847, 0.316, -0.364, -0.226 ] } }, { "index": 1444, "index_chain": 1444, "chain_name": "a", "nt_resnum": 1445, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1445", "linked_nts": [ "///a/1444", "///a/1446" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -112.980, "beta": 129.281, "gamma": 24.485, "delta": 146.450, "epsilon": -93.584, "zeta": -119.879, "epsilon_zeta": 26.295, "bb_type": "--", "chi": -154.321, "glyco_bond": "anti", "C5prime_xyz": [ -2.060, 8.805, 0.534 ], "P_xyz": [ -0.245, 8.777, 2.436 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 85.736, "theta": -65.352, "eta_prime": 103.199, "theta_prime": -69.593, "eta_base": 70.439, "theta_base": -17.039, "v0": -25.644, "v1": 39.167, "v2": -36.927, "v3": 23.107, "v4": 1.325, "amplitude": 39.485, "phase_angle": 159.262, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.060, "frame": { "rmsd": 0.005, "origin": [ 145.691, 194.644, 301.919 ], "x_axis": [ 0.461, 0.690, 0.558 ], "y_axis": [ -0.109, -0.580, 0.807 ], "z_axis": [ 0.881, -0.433, -0.192 ], "quaternion": [ 0.415, 0.747, 0.195, 0.481 ] } }, { "index": 1445, "index_chain": 1445, "chain_name": "a", "nt_resnum": 1446, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1446", "linked_nts": [ "///a/1445", "///a/1447" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,non-stack", "alpha": -7.848, "beta": 102.303, "gamma": 83.070, "delta": 152.140, "epsilon": -123.932, "zeta": 54.302, "epsilon_zeta": 181.766, "bb_type": "--", "chi": -66.673, "glyco_bond": "--", "C5prime_xyz": [ -3.116, 6.683, -3.056 ], "P_xyz": [ -1.279, 5.000, -3.903 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.574, "theta": 102.969, "eta_prime": -83.510, "theta_prime": 39.781, "eta_base": -74.392, "theta_base": 90.800, "v0": -19.537, "v1": 35.883, "v2": -37.628, "v3": 27.340, "v4": -5.098, "amplitude": 38.361, "phase_angle": 168.776, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.035, "frame": { "rmsd": 0.008, "origin": [ 147.048, 184.064, 308.602 ], "x_axis": [ -0.449, -0.731, 0.514 ], "y_axis": [ -0.427, -0.329, -0.842 ], "z_axis": [ 0.785, -0.598, -0.164 ], "quaternion": [ -0.119, 0.511, -0.567, 0.635 ] } }, { "index": 1446, "index_chain": 1446, "chain_name": "a", "nt_resnum": 1447, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1447", "linked_nts": [ "///a/1446", "///a/1448" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-canonical,helix-end", "alpha": -172.462, "beta": -134.781, "gamma": 86.207, "delta": 77.690, "epsilon": -117.098, "zeta": -57.595, "epsilon_zeta": -59.503, "bb_type": "--", "chi": 37.968, "glyco_bond": "syn", "C5prime_xyz": [ -5.697, 3.937, 0.548 ], "P_xyz": [ -5.540, 1.336, 0.638 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.850, "theta": -106.334, "eta_prime": 157.618, "theta_prime": -94.901, "eta_base": 166.083, "theta_base": -109.029, "v0": -6.199, "v1": -18.333, "v2": 34.373, "v3": -38.950, "v4": 28.501, "amplitude": 38.788, "phase_angle": 27.605, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "6g", "suiteness": 0.010, "filter_rmsd": 0.041, "frame": { "rmsd": 0.009, "origin": [ 147.983, 188.938, 302.172 ], "x_axis": [ 0.056, 0.826, 0.561 ], "y_axis": [ -0.572, 0.487, -0.660 ], "z_axis": [ -0.818, -0.284, 0.499 ], "quaternion": [ 0.715, -0.131, -0.483, 0.489 ] } }, { "index": 1447, "index_chain": 1447, "chain_name": "a", "nt_resnum": 1448, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1448", "linked_nts": [ "///a/1447", "///a/1449" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -70.631, "beta": 133.847, "gamma": 109.350, "delta": 83.056, "epsilon": -141.983, "zeta": -87.637, "epsilon_zeta": -54.347, "bb_type": "BI", "chi": -170.273, "glyco_bond": "anti", "C5prime_xyz": [ -1.268, 8.548, 1.152 ], "P_xyz": [ 0.579, 9.426, -0.491 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.615, "theta": -161.190, "eta_prime": -137.105, "theta_prime": -164.724, "eta_base": -117.964, "theta_base": -139.715, "v0": 4.043, "v1": -25.528, "v2": 36.138, "v3": -34.755, "v4": 19.445, "amplitude": 37.013, "phase_angle": 12.486, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 152.706, 188.345, 302.436 ], "x_axis": [ 0.229, -0.972, -0.057 ], "y_axis": [ -0.471, -0.059, -0.880 ], "z_axis": [ 0.852, 0.228, -0.471 ], "quaternion": [ -0.418, 0.663, -0.544, 0.300 ] } }, { "index": 1448, "index_chain": 1448, "chain_name": "a", "nt_resnum": 1449, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1449", "linked_nts": [ "///a/1448", "///a/1450" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -49.690, "beta": 157.859, "gamma": 52.800, "delta": 80.054, "epsilon": -132.385, "zeta": -72.753, "epsilon_zeta": -59.632, "bb_type": "BI", "chi": -171.435, "glyco_bond": "anti", "C5prime_xyz": [ -1.195, 8.492, 1.194 ], "P_xyz": [ 1.418, 8.551, 1.150 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.010, "theta": -129.710, "eta_prime": -173.764, "theta_prime": -127.750, "eta_base": -134.450, "theta_base": -85.664, "v0": 6.948, "v1": -29.311, "v2": 39.450, "v3": -36.455, "v4": 18.591, "amplitude": 39.920, "phase_angle": 8.796, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.639, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 156.909, 189.040, 301.581 ], "x_axis": [ 0.003, -0.829, -0.559 ], "y_axis": [ -0.598, 0.446, -0.666 ], "z_axis": [ 0.802, 0.336, -0.494 ], "quaternion": [ 0.489, -0.513, 0.696, -0.119 ] } }, { "index": 1449, "index_chain": 1449, "chain_name": "a", "nt_resnum": 1450, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1450", "linked_nts": [ "///a/1449", "///a/1451" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -60.172, "beta": 162.013, "gamma": 59.774, "delta": 79.304, "epsilon": -121.323, "zeta": -77.156, "epsilon_zeta": -44.167, "bb_type": "--", "chi": -167.499, "glyco_bond": "anti", "C5prime_xyz": [ -1.144, 8.592, 0.967 ], "P_xyz": [ 1.462, 8.755, 0.765 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.708, "theta": -127.921, "eta_prime": -170.575, "theta_prime": -125.596, "eta_base": -107.665, "theta_base": -78.293, "v0": 6.282, "v1": -28.884, "v2": 39.441, "v3": -36.794, "v4": 19.308, "amplitude": 40.024, "phase_angle": 9.786, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.786, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 159.432, 187.538, 298.570 ], "x_axis": [ -0.458, -0.221, -0.861 ], "y_axis": [ -0.310, 0.948, -0.078 ], "z_axis": [ 0.833, 0.231, -0.503 ], "quaternion": [ 0.497, -0.155, 0.853, 0.045 ] } }, { "index": 1450, "index_chain": 1450, "chain_name": "a", "nt_resnum": 1451, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1451", "linked_nts": [ "///a/1450", "///a/1452" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -61.568, "beta": 151.845, "gamma": 61.760, "delta": 79.342, "epsilon": -145.285, "zeta": -75.742, "epsilon_zeta": -69.542, "bb_type": "BI", "chi": -169.817, "glyco_bond": "anti", "C5prime_xyz": [ -1.233, 8.563, 1.080 ], "P_xyz": [ 1.318, 8.768, 0.566 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.700, "theta": -142.766, "eta_prime": -178.493, "theta_prime": -144.544, "eta_base": -105.488, "theta_base": -119.920, "v0": 5.398, "v1": -28.324, "v2": 39.238, "v3": -37.083, "v4": 20.018, "amplitude": 39.966, "phase_angle": 10.956, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.485, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 160.007, 187.923, 294.423 ], "x_axis": [ -0.631, 0.549, -0.549 ], "y_axis": [ 0.280, 0.821, 0.498 ], "z_axis": [ 0.724, 0.161, -0.671 ], "quaternion": [ 0.360, 0.235, 0.883, 0.186 ] } }, { "index": 1451, "index_chain": 1451, "chain_name": "a", "nt_resnum": 1452, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1452", "linked_nts": [ "///a/1451", "///a/1453" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -59.902, "beta": 171.593, "gamma": 55.331, "delta": 80.310, "epsilon": -143.747, "zeta": -82.731, "epsilon_zeta": -61.016, "bb_type": "BI", "chi": -178.747, "glyco_bond": "anti", "C5prime_xyz": [ -1.383, 8.461, 1.611 ], "P_xyz": [ 1.137, 8.622, 2.260 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.958, "theta": -149.968, "eta_prime": -174.416, "theta_prime": -147.015, "eta_base": -131.399, "theta_base": -126.039, "v0": 3.153, "v1": -25.795, "v2": 37.501, "v3": -36.602, "v4": 21.047, "amplitude": 38.643, "phase_angle": 13.965, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.957, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 161.451, 188.102, 290.373 ], "x_axis": [ -0.522, 0.853, 0.021 ], "y_axis": [ 0.519, 0.298, 0.801 ], "z_axis": [ 0.677, 0.429, -0.598 ], "quaternion": [ 0.211, 0.441, 0.777, 0.396 ] } }, { "index": 1452, "index_chain": 1452, "chain_name": "a", "nt_resnum": 1453, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1453", "linked_nts": [ "///a/1452", "///a/1454" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -56.048, "beta": 158.995, "gamma": 65.428, "delta": 80.174, "epsilon": -137.418, "zeta": -71.038, "epsilon_zeta": -66.380, "bb_type": "BI", "chi": -170.154, "glyco_bond": "anti", "C5prime_xyz": [ -1.210, 8.512, 1.119 ], "P_xyz": [ 1.360, 8.800, 0.795 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.803, "theta": -134.962, "eta_prime": -167.857, "theta_prime": -135.004, "eta_base": -133.659, "theta_base": -102.951, "v0": 5.315, "v1": -27.680, "v2": 38.406, "v3": -36.260, "v4": 19.599, "amplitude": 39.118, "phase_angle": 10.948, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.653, "filter_rmsd": 0.039, "frame": { "rmsd": 0.015, "origin": [ 162.883, 188.952, 286.560 ], "x_axis": [ 0.002, 0.977, 0.215 ], "y_axis": [ 0.696, -0.156, 0.701 ], "z_axis": [ 0.718, 0.148, -0.681 ], "quaternion": [ 0.204, 0.678, 0.617, 0.344 ] } }, { "index": 1453, "index_chain": 1453, "chain_name": "a", "nt_resnum": 1454, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1454", "linked_nts": [ "///a/1453", "///a/1455" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -62.319, "beta": 161.414, "gamma": 64.810, "delta": 77.882, "epsilon": -156.387, "zeta": -80.333, "epsilon_zeta": -76.055, "bb_type": "BI", "chi": -159.963, "glyco_bond": "anti", "C5prime_xyz": [ -1.495, 8.844, 0.497 ], "P_xyz": [ 1.020, 9.379, 0.073 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.461, "theta": -123.788, "eta_prime": -170.888, "theta_prime": -133.988, "eta_base": -116.993, "theta_base": -99.403, "v0": -0.630, "v1": -23.254, "v2": 37.028, "v3": -38.319, "v4": 24.596, "amplitude": 39.274, "phase_angle": 19.471, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.716, "filter_rmsd": 0.065, "frame": { "rmsd": 0.008, "origin": [ 163.996, 191.581, 284.339 ], "x_axis": [ 0.467, 0.697, 0.544 ], "y_axis": [ 0.679, -0.677, 0.284 ], "z_axis": [ 0.566, 0.237, -0.789 ], "quaternion": [ 0.014, 0.856, 0.402, 0.324 ] } }, { "index": 1454, "index_chain": 1454, "chain_name": "a", "nt_resnum": 1455, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1455", "linked_nts": [ "///a/1454", "///a/1456" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end,multiplet", "alpha": 152.616, "beta": -147.160, "gamma": 169.036, "delta": 78.448, "epsilon": -124.628, "zeta": -70.717, "epsilon_zeta": -53.911, "bb_type": "--", "chi": -173.123, "glyco_bond": "anti", "C5prime_xyz": [ -1.282, 8.538, 1.271 ], "P_xyz": [ 0.393, 9.890, -0.218 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.280, "theta": -144.617, "eta_prime": 177.509, "theta_prime": -143.940, "eta_base": -123.780, "theta_base": -107.860, "v0": 3.596, "v1": -26.581, "v2": 38.244, "v3": -37.227, "v4": 21.165, "amplitude": 39.327, "phase_angle": 13.480, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.668, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 165.991, 194.556, 283.477 ], "x_axis": [ 0.755, 0.152, 0.637 ], "y_axis": [ 0.394, -0.883, -0.255 ], "z_axis": [ 0.524, 0.444, -0.727 ], "quaternion": [ -0.191, 0.917, 0.149, 0.316 ] } }, { "index": 1455, "index_chain": 1455, "chain_name": "a", "nt_resnum": 1456, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1456", "linked_nts": [ "///a/1455", "///a/1457" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -68.958, "beta": 167.071, "gamma": 65.191, "delta": 78.703, "epsilon": -132.920, "zeta": -76.109, "epsilon_zeta": -56.811, "bb_type": "BI", "chi": -170.637, "glyco_bond": "anti", "C5prime_xyz": [ -1.774, 8.738, 1.054 ], "P_xyz": [ 0.698, 9.506, 1.198 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.319, "theta": -138.911, "eta_prime": -174.753, "theta_prime": -136.489, "eta_base": -121.639, "theta_base": -84.274, "v0": -3.935, "v1": -20.285, "v2": 35.287, "v3": -38.616, "v4": 26.837, "amplitude": 38.726, "phase_angle": 24.330, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.563, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 169.580, 197.120, 283.418 ], "x_axis": [ 0.627, -0.608, 0.487 ], "y_axis": [ -0.176, -0.720, -0.671 ], "z_axis": [ 0.759, 0.335, -0.559 ], "quaternion": [ -0.295, 0.852, -0.230, 0.365 ] } }, { "index": 1456, "index_chain": 1456, "chain_name": "a", "nt_resnum": 1457, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1457", "linked_nts": [ "///a/1456", "///a/1458" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -67.831, "beta": 159.340, "gamma": 61.871, "delta": 82.142, "epsilon": -148.541, "zeta": -85.355, "epsilon_zeta": -63.186, "bb_type": "BI", "chi": -157.311, "glyco_bond": "anti", "C5prime_xyz": [ -1.390, 8.743, 0.370 ], "P_xyz": [ 1.183, 9.036, 0.014 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.829, "theta": -155.540, "eta_prime": -179.018, "theta_prime": -159.270, "eta_base": -109.305, "theta_base": -165.770, "v0": 1.396, "v1": -23.250, "v2": 35.027, "v3": -35.156, "v4": 21.340, "amplitude": 36.524, "phase_angle": 16.460, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.739, "filter_rmsd": 0.106, "frame": { "rmsd": 0.011, "origin": [ 173.099, 196.404, 282.999 ], "x_axis": [ 0.236, -0.961, -0.143 ], "y_axis": [ -0.407, 0.036, -0.913 ], "z_axis": [ 0.883, 0.273, -0.383 ], "quaternion": [ -0.471, 0.629, -0.544, 0.294 ] } }, { "index": 1457, "index_chain": 1457, "chain_name": "a", "nt_resnum": 1458, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1458", "linked_nts": [ "///a/1457", "///a/1459" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -76.787, "beta": 166.626, "gamma": 64.327, "delta": 80.605, "epsilon": -146.305, "zeta": -77.493, "epsilon_zeta": -68.813, "bb_type": "BI", "chi": -148.785, "glyco_bond": "anti", "C5prime_xyz": [ -1.681, 8.771, -0.168 ], "P_xyz": [ 0.799, 9.313, -0.791 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.441, "theta": -146.566, "eta_prime": 170.778, "theta_prime": -147.348, "eta_base": 176.183, "theta_base": -120.739, "v0": -0.741, "v1": -22.190, "v2": 35.337, "v3": -36.729, "v4": 23.618, "amplitude": 37.529, "phase_angle": 19.680, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.665, "filter_rmsd": 0.103, "frame": { "rmsd": 0.010, "origin": [ 175.751, 198.451, 283.716 ], "x_axis": [ 0.032, -0.942, -0.334 ], "y_axis": [ -0.195, 0.322, -0.927 ], "z_axis": [ 0.980, 0.095, -0.173 ], "quaternion": [ 0.543, -0.470, 0.605, -0.344 ] } }, { "index": 1458, "index_chain": 1458, "chain_name": "a", "nt_resnum": 1459, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1459", "linked_nts": [ "///a/1458", "///a/1460" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -59.641, "beta": 164.191, "gamma": 59.991, "delta": 78.383, "epsilon": -126.463, "zeta": -82.921, "epsilon_zeta": -43.542, "bb_type": "--", "chi": -157.010, "glyco_bond": "anti", "C5prime_xyz": [ -1.502, 8.753, 0.320 ], "P_xyz": [ 1.030, 9.294, -0.020 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.144, "theta": -137.757, "eta_prime": -172.509, "theta_prime": -135.625, "eta_base": -134.843, "theta_base": -106.367, "v0": 1.213, "v1": -24.403, "v2": 37.060, "v3": -37.389, "v4": 22.862, "amplitude": 38.731, "phase_angle": 16.892, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.872, "filter_rmsd": 0.038, "frame": { "rmsd": 0.012, "origin": [ 179.914, 197.049, 282.800 ], "x_axis": [ -0.263, -0.615, -0.743 ], "y_axis": [ -0.165, 0.788, -0.594 ], "z_axis": [ 0.951, -0.033, -0.308 ], "quaternion": [ 0.552, -0.254, 0.768, -0.204 ] } }, { "index": 1459, "index_chain": 1459, "chain_name": "a", "nt_resnum": 1460, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1460", "linked_nts": [ "///a/1459", "///a/1461" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -52.389, "beta": 160.228, "gamma": 47.818, "delta": 78.129, "epsilon": -134.950, "zeta": -80.250, "epsilon_zeta": -54.700, "bb_type": "BI", "chi": -152.085, "glyco_bond": "anti", "C5prime_xyz": [ -1.743, 8.909, 0.012 ], "P_xyz": [ 0.771, 9.598, -0.129 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.990, "theta": -139.861, "eta_prime": 179.069, "theta_prime": -134.728, "eta_base": -139.154, "theta_base": -90.544, "v0": -3.099, "v1": -20.790, "v2": 35.349, "v3": -38.125, "v4": 26.004, "amplitude": 38.435, "phase_angle": 23.115, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.594, "filter_rmsd": 0.059, "frame": { "rmsd": 0.011, "origin": [ 182.316, 195.176, 280.591 ], "x_axis": [ -0.655, -0.015, -0.756 ], "y_axis": [ 0.157, 0.975, -0.155 ], "z_axis": [ 0.739, -0.220, -0.636 ], "quaternion": [ 0.414, 0.039, 0.904, -0.104 ] } }, { "index": 1460, "index_chain": 1460, "chain_name": "a", "nt_resnum": 1461, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1461", "linked_nts": [ "///a/1460", "///a/1462" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -51.844, "beta": 163.564, "gamma": 49.429, "delta": 83.516, "epsilon": -157.626, "zeta": -100.555, "epsilon_zeta": -57.071, "bb_type": "BI", "chi": -159.763, "glyco_bond": "anti", "C5prime_xyz": [ -1.192, 8.733, 0.545 ], "P_xyz": [ 1.415, 8.840, 0.762 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.191, "theta": -173.614, "eta_prime": -174.099, "theta_prime": -173.619, "eta_base": -115.975, "theta_base": -168.455, "v0": 2.005, "v1": -23.320, "v2": 34.567, "v3": -34.327, "v4": 20.398, "amplitude": 35.863, "phase_angle": 15.448, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.738, "filter_rmsd": 0.071, "frame": { "rmsd": 0.012, "origin": [ 183.145, 195.565, 275.479 ], "x_axis": [ -0.573, 0.778, -0.260 ], "y_axis": [ 0.625, 0.619, 0.476 ], "z_axis": [ 0.531, 0.110, -0.840 ], "quaternion": [ 0.227, 0.403, 0.871, 0.168 ] } }, { "index": 1461, "index_chain": 1461, "chain_name": "a", "nt_resnum": 1462, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1462", "linked_nts": [ "///a/1461", "///a/1463" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -59.458, "beta": 165.877, "gamma": 58.017, "delta": 80.769, "epsilon": -134.604, "zeta": -78.660, "epsilon_zeta": -55.943, "bb_type": "BI", "chi": -173.268, "glyco_bond": "anti", "C5prime_xyz": [ -1.372, 8.468, 1.283 ], "P_xyz": [ 1.222, 8.757, 1.407 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 179.408, "theta": -137.524, "eta_prime": 177.666, "theta_prime": -135.269, "eta_base": -176.361, "theta_base": -108.657, "v0": 4.235, "v1": -26.612, "v2": 37.689, "v3": -36.196, "v4": 20.154, "amplitude": 38.589, "phase_angle": 12.400, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.429, "filter_rmsd": 0.040, "frame": { "rmsd": 0.012, "origin": [ 186.771, 192.034, 271.823 ], "x_axis": [ -0.579, 0.795, -0.180 ], "y_axis": [ 0.552, 0.544, 0.632 ], "z_axis": [ 0.601, 0.266, -0.754 ], "quaternion": [ 0.230, 0.397, 0.848, 0.265 ] } }, { "index": 1462, "index_chain": 1462, "chain_name": "a", "nt_resnum": 1463, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1463", "linked_nts": [ "///a/1462", "///a/1464" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -55.172, "beta": 157.200, "gamma": 67.860, "delta": 79.240, "epsilon": -128.930, "zeta": -56.003, "epsilon_zeta": -72.927, "bb_type": "BI", "chi": -158.677, "glyco_bond": "anti", "C5prime_xyz": [ -1.670, 8.919, 0.373 ], "P_xyz": [ 0.813, 9.552, -0.107 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 179.400, "theta": -116.213, "eta_prime": -164.211, "theta_prime": -113.328, "eta_base": -123.078, "theta_base": -70.277, "v0": -4.501, "v1": -19.158, "v2": 34.157, "v3": -37.719, "v4": 26.606, "amplitude": 37.777, "phase_angle": 25.290, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.549, "filter_rmsd": 0.061, "frame": { "rmsd": 0.011, "origin": [ 186.519, 193.222, 268.337 ], "x_axis": [ -0.123, 0.986, 0.110 ], "y_axis": [ 0.886, 0.059, 0.460 ], "z_axis": [ 0.447, 0.154, -0.881 ], "quaternion": [ 0.117, 0.652, 0.718, 0.214 ] } }, { "index": 1463, "index_chain": 1463, "chain_name": "a", "nt_resnum": 1464, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1464", "linked_nts": [ "///a/1463", "///a/1465" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -75.477, "beta": 162.292, "gamma": 72.322, "delta": 77.799, "epsilon": -145.164, "zeta": -69.400, "epsilon_zeta": -75.764, "bb_type": "BI", "chi": -167.028, "glyco_bond": "anti", "C5prime_xyz": [ -1.435, 8.711, 0.892 ], "P_xyz": [ 1.069, 9.264, 0.404 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.201, "theta": -141.937, "eta_prime": -168.242, "theta_prime": -144.402, "eta_base": -99.273, "theta_base": -114.333, "v0": 1.283, "v1": -25.236, "v2": 38.334, "v3": -38.592, "v4": 23.560, "amplitude": 40.044, "phase_angle": 16.806, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.337, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 190.181, 198.896, 267.063 ], "x_axis": [ 0.642, 0.421, 0.641 ], "y_axis": [ 0.505, -0.861, 0.059 ], "z_axis": [ 0.576, 0.286, -0.766 ], "quaternion": [ -0.063, 0.904, 0.256, 0.337 ] } }, { "index": 1464, "index_chain": 1464, "chain_name": "a", "nt_resnum": 1465, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1465", "linked_nts": [ "///a/1464", "///a/1466" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -69.478, "beta": 175.949, "gamma": 53.338, "delta": 76.473, "epsilon": -149.708, "zeta": -75.346, "epsilon_zeta": -74.363, "bb_type": "BI", "chi": -175.237, "glyco_bond": "anti", "C5prime_xyz": [ -1.371, 8.563, 1.359 ], "P_xyz": [ 1.159, 9.004, 1.832 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.249, "theta": -152.425, "eta_prime": 175.125, "theta_prime": -149.372, "eta_base": -134.042, "theta_base": -133.626, "v0": 3.008, "v1": -27.469, "v2": 40.195, "v3": -39.473, "v4": 22.957, "amplitude": 41.514, "phase_angle": 14.483, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.909, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 192.858, 201.687, 265.392 ], "x_axis": [ 0.640, -0.279, 0.716 ], "y_axis": [ -0.054, -0.946, -0.321 ], "z_axis": [ 0.766, 0.167, -0.620 ], "quaternion": [ -0.136, 0.895, -0.093, 0.414 ] } }, { "index": 1465, "index_chain": 1465, "chain_name": "a", "nt_resnum": 1466, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1466", "linked_nts": [ "///a/1465", "///a/1467" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -61.512, "beta": 174.181, "gamma": 60.046, "delta": 77.062, "epsilon": -131.195, "zeta": -92.886, "epsilon_zeta": -38.309, "bb_type": "--", "chi": -163.717, "glyco_bond": "anti", "C5prime_xyz": [ -1.582, 8.721, 0.715 ], "P_xyz": [ 0.961, 9.358, 0.793 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.876, "theta": -154.646, "eta_prime": -172.743, "theta_prime": -151.066, "eta_base": -149.065, "theta_base": -120.497, "v0": 0.220, "v1": -24.241, "v2": 37.826, "v3": -38.699, "v4": 24.234, "amplitude": 39.838, "phase_angle": 18.287, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.852, "filter_rmsd": 0.040, "frame": { "rmsd": 0.012, "origin": [ 195.295, 204.521, 264.753 ], "x_axis": [ 0.576, -0.653, 0.493 ], "y_axis": [ -0.228, -0.706, -0.670 ], "z_axis": [ 0.785, 0.274, -0.555 ], "quaternion": [ -0.280, 0.842, -0.261, 0.379 ] } }, { "index": 1466, "index_chain": 1466, "chain_name": "a", "nt_resnum": 1467, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1467", "linked_nts": [ "///a/1466", "///a/1468" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -60.871, "beta": 147.795, "gamma": 64.889, "delta": 79.466, "epsilon": -129.274, "zeta": -94.832, "epsilon_zeta": -34.443, "bb_type": "--", "chi": -163.435, "glyco_bond": "anti", "C5prime_xyz": [ -1.293, 8.712, 0.741 ], "P_xyz": [ 1.220, 8.904, 0.094 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.068, "theta": -147.717, "eta_prime": 179.460, "theta_prime": -146.728, "eta_base": -139.882, "theta_base": -124.101, "v0": 3.183, "v1": -26.406, "v2": 38.414, "v3": -37.598, "v4": 21.704, "amplitude": 39.609, "phase_angle": 14.108, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.409, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 198.525, 205.342, 264.084 ], "x_axis": [ 0.268, -0.956, 0.121 ], "y_axis": [ -0.368, -0.217, -0.904 ], "z_axis": [ 0.891, 0.198, -0.410 ], "quaternion": [ -0.400, 0.688, -0.481, 0.367 ] } }, { "index": 1467, "index_chain": 1467, "chain_name": "a", "nt_resnum": 1468, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1468", "linked_nts": [ "///a/1467", "///a/1469" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -51.871, "beta": 147.589, "gamma": 62.958, "delta": 80.365, "epsilon": -135.947, "zeta": -94.190, "epsilon_zeta": -41.758, "bb_type": "BI", "chi": -151.563, "glyco_bond": "anti", "C5prime_xyz": [ -1.556, 8.750, 0.015 ], "P_xyz": [ 0.899, 8.912, -0.834 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.616, "theta": -123.826, "eta_prime": -172.998, "theta_prime": -142.112, "eta_base": -137.062, "theta_base": -146.887, "v0": 1.766, "v1": -24.436, "v2": 36.659, "v3": -36.607, "v4": 21.975, "amplitude": 38.139, "phase_angle": 16.013, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.368, "filter_rmsd": 0.106, "frame": { "rmsd": 0.010, "origin": [ 201.942, 205.278, 263.648 ], "x_axis": [ 0.087, -0.940, -0.329 ], "y_axis": [ -0.237, 0.301, -0.924 ], "z_axis": [ 0.968, 0.158, -0.197 ], "quaternion": [ 0.546, -0.496, 0.594, -0.322 ] } }, { "index": 1468, "index_chain": 1468, "chain_name": "a", "nt_resnum": 1469, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1469", "linked_nts": [ "///a/1468", "///a/1470" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 95.487, "beta": -144.464, "gamma": -124.452, "delta": 81.753, "epsilon": -152.233, "zeta": -90.351, "epsilon_zeta": -61.882, "bb_type": "BI", "chi": -164.618, "glyco_bond": "anti", "C5prime_xyz": [ -1.153, 8.620, 0.847 ], "P_xyz": [ -0.699, 11.007, -0.092 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.187, "theta": -171.037, "eta_prime": -179.672, "theta_prime": -160.861, "eta_base": -164.699, "theta_base": -121.413, "v0": 5.462, "v1": -26.856, "v2": 37.007, "v3": -34.844, "v4": 18.572, "amplitude": 37.637, "phase_angle": 10.495, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 206.611, 204.745, 265.234 ], "x_axis": [ -0.093, -0.881, -0.464 ], "y_axis": [ -0.255, 0.472, -0.844 ], "z_axis": [ 0.962, 0.040, -0.269 ], "quaternion": [ 0.527, -0.419, 0.677, -0.297 ] } }, { "index": 1469, "index_chain": 1469, "chain_name": "a", "nt_resnum": 1470, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1470", "linked_nts": [ "///a/1469", "///a/1471" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem", "alpha": 150.319, "beta": -132.090, "gamma": 176.093, "delta": 81.942, "epsilon": -114.684, "zeta": -69.016, "epsilon_zeta": -45.668, "bb_type": "--", "chi": -174.937, "glyco_bond": "anti", "C5prime_xyz": [ -1.344, 8.440, 1.418 ], "P_xyz": [ 0.411, 9.623, -0.104 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.193, "theta": -135.202, "eta_prime": -166.509, "theta_prime": -136.354, "eta_base": -116.361, "theta_base": -90.370, "v0": 3.145, "v1": -24.732, "v2": 35.797, "v3": -34.987, "v4": 20.099, "amplitude": 36.873, "phase_angle": 13.873, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.402, "filter_rmsd": 0.038, "frame": { "rmsd": 0.013, "origin": [ 209.836, 202.218, 264.126 ], "x_axis": [ -0.112, -0.440, -0.891 ], "y_axis": [ -0.021, 0.898, -0.440 ], "z_axis": [ 0.994, -0.031, -0.109 ], "quaternion": [ 0.647, -0.158, 0.728, -0.162 ] } }, { "index": 1470, "index_chain": 1470, "chain_name": "a", "nt_resnum": 1471, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1471", "linked_nts": [ "///a/1470", "///a/1472" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -72.435, "beta": 154.809, "gamma": 69.623, "delta": 76.686, "epsilon": -151.174, "zeta": -74.665, "epsilon_zeta": -76.509, "bb_type": "BI", "chi": -164.207, "glyco_bond": "anti", "C5prime_xyz": [ -1.710, 8.836, 0.692 ], "P_xyz": [ 0.728, 9.576, 0.148 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 151.309, "theta": -151.831, "eta_prime": 179.257, "theta_prime": -153.711, "eta_base": -110.910, "theta_base": -126.781, "v0": -3.077, "v1": -21.462, "v2": 36.446, "v3": -39.159, "v4": 26.631, "amplitude": 39.567, "phase_angle": 22.910, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.255, "filter_rmsd": 0.101, "frame": { "rmsd": 0.009, "origin": [ 211.963, 200.766, 260.948 ], "x_axis": [ -0.241, 0.382, -0.892 ], "y_axis": [ 0.282, 0.907, 0.313 ], "z_axis": [ 0.929, -0.176, -0.326 ], "quaternion": [ 0.579, 0.211, 0.786, 0.044 ] } }, { "index": 1471, "index_chain": 1471, "chain_name": "a", "nt_resnum": 1472, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1472", "linked_nts": [ "///a/1471", "///a/1473" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -68.820, "beta": 162.925, "gamma": 68.647, "delta": 83.235, "epsilon": -139.058, "zeta": -58.170, "epsilon_zeta": -80.889, "bb_type": "BI", "chi": -150.179, "glyco_bond": "anti", "C5prime_xyz": [ -1.662, 8.783, -0.092 ], "P_xyz": [ 0.817, 9.306, -0.744 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.730, "theta": -135.027, "eta_prime": -172.331, "theta_prime": -151.135, "eta_base": -132.674, "theta_base": -161.343, "v0": -1.436, "v1": -20.073, "v2": 32.649, "v3": -34.400, "v4": 22.662, "amplitude": 34.955, "phase_angle": 20.926, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.579, "filter_rmsd": 0.100, "frame": { "rmsd": 0.011, "origin": [ 213.545, 199.577, 259.057 ], "x_axis": [ 0.020, 0.754, -0.656 ], "y_axis": [ 0.629, 0.501, 0.594 ], "z_axis": [ 0.777, -0.425, -0.465 ], "quaternion": [ 0.514, 0.496, 0.697, 0.061 ] } }, { "index": 1472, "index_chain": 1472, "chain_name": "a", "nt_resnum": 1473, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1473", "linked_nts": [ "///a/1472", "///a/1474" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -132.337, "beta": 123.823, "gamma": 129.183, "delta": 82.130, "epsilon": -132.733, "zeta": -76.939, "epsilon_zeta": -55.793, "bb_type": "BI", "chi": -154.159, "glyco_bond": "anti", "C5prime_xyz": [ -1.269, 8.778, 0.202 ], "P_xyz": [ -0.358, 9.685, -2.083 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.378, "theta": -161.640, "eta_prime": 163.670, "theta_prime": -160.701, "eta_base": 170.053, "theta_base": -124.233, "v0": 2.550, "v1": -24.130, "v2": 35.396, "v3": -34.877, "v4": 20.407, "amplitude": 36.596, "phase_angle": 14.712, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.069, "frame": { "rmsd": 0.012, "origin": [ 214.392, 197.405, 257.595 ], "x_axis": [ 0.021, 0.904, -0.427 ], "y_axis": [ 0.861, 0.201, 0.467 ], "z_axis": [ 0.508, -0.378, -0.774 ], "quaternion": [ 0.334, 0.631, 0.699, 0.032 ] } }, { "index": 1473, "index_chain": 1473, "chain_name": "a", "nt_resnum": 1474, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1474", "linked_nts": [ "///a/1473", "///a/1475" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -60.417, "beta": 170.022, "gamma": 45.433, "delta": 80.384, "epsilon": -131.118, "zeta": -78.702, "epsilon_zeta": -52.416, "bb_type": "BI", "chi": -176.563, "glyco_bond": "anti", "C5prime_xyz": [ -1.420, 8.476, 1.494 ], "P_xyz": [ 1.044, 8.687, 2.347 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.498, "theta": -138.412, "eta_prime": 176.302, "theta_prime": -133.261, "eta_base": -134.316, "theta_base": -98.004, "v0": 2.698, "v1": -25.381, "v2": 37.166, "v3": -36.620, "v4": 21.381, "amplitude": 38.416, "phase_angle": 14.660, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.779, "filter_rmsd": 0.042, "frame": { "rmsd": 0.011, "origin": [ 216.877, 198.195, 253.526 ], "x_axis": [ 0.140, 0.865, 0.481 ], "y_axis": [ 0.492, -0.483, 0.724 ], "z_axis": [ 0.859, 0.135, -0.494 ], "quaternion": [ 0.202, 0.727, 0.466, 0.461 ] } }, { "index": 1474, "index_chain": 1474, "chain_name": "a", "nt_resnum": 1475, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1475", "linked_nts": [ "///a/1474", "///a/1476" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -71.353, "beta": 159.040, "gamma": 72.503, "delta": 83.478, "epsilon": -153.126, "zeta": -75.157, "epsilon_zeta": -77.969, "bb_type": "BI", "chi": -159.178, "glyco_bond": "anti", "C5prime_xyz": [ -1.481, 8.732, 0.468 ], "P_xyz": [ 1.027, 9.122, -0.201 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.720, "theta": -146.987, "eta_prime": -173.108, "theta_prime": -151.506, "eta_base": -121.835, "theta_base": -145.777, "v0": 0.371, "v1": -22.393, "v2": 34.613, "v3": -35.313, "v4": 22.035, "amplitude": 36.392, "phase_angle": 17.986, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.376, "filter_rmsd": 0.104, "frame": { "rmsd": 0.010, "origin": [ 219.146, 200.463, 251.966 ], "x_axis": [ 0.512, 0.408, 0.756 ], "y_axis": [ 0.454, -0.876, 0.165 ], "z_axis": [ 0.730, 0.258, -0.633 ], "quaternion": [ -0.027, 0.869, 0.248, 0.428 ] } }, { "index": 1475, "index_chain": 1475, "chain_name": "a", "nt_resnum": 1476, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1476", "linked_nts": [ "///a/1475", "///a/1477" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -74.132, "beta": -178.142, "gamma": 56.916, "delta": 83.897, "epsilon": -136.972, "zeta": -140.827, "epsilon_zeta": 3.855, "bb_type": "--", "chi": -145.942, "glyco_bond": "anti", "C5prime_xyz": [ -1.683, 8.845, -0.338 ], "P_xyz": [ 0.830, 9.599, -0.356 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.807, "theta": 156.239, "eta_prime": -179.889, "theta_prime": 165.189, "eta_base": -163.774, "theta_base": 168.623, "v0": -3.333, "v1": -18.054, "v2": 31.226, "v3": -34.010, "v4": 23.636, "amplitude": 34.199, "phase_angle": 24.069, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.884, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 220.453, 202.842, 249.646 ], "x_axis": [ 0.498, -0.043, 0.866 ], "y_axis": [ 0.361, -0.897, -0.253 ], "z_axis": [ 0.788, 0.439, -0.431 ], "quaternion": [ -0.206, 0.841, 0.095, 0.492 ] } }, { "index": 1476, "index_chain": 1476, "chain_name": "a", "nt_resnum": 1477, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1477", "linked_nts": [ "///a/1476", "///a/1478" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -61.901, "beta": 153.195, "gamma": 47.029, "delta": 85.536, "epsilon": -124.991, "zeta": -62.853, "epsilon_zeta": -62.138, "bb_type": "--", "chi": -154.602, "glyco_bond": "anti", "C5prime_xyz": [ -1.499, 8.676, 0.236 ], "P_xyz": [ 1.120, 8.905, 0.183 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.795, "theta": -109.841, "eta_prime": 168.285, "theta_prime": -104.285, "eta_base": 159.806, "theta_base": -68.953, "v0": 1.694, "v1": -22.272, "v2": 33.126, "v3": -33.084, "v4": 19.816, "amplitude": 34.434, "phase_angle": 15.844, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "7a", "suiteness": 0.933, "filter_rmsd": 0.040, "frame": { "rmsd": 0.019, "origin": [ 221.610, 205.083, 241.779 ], "x_axis": [ 0.146, 0.132, 0.980 ], "y_axis": [ 0.357, -0.931, 0.073 ], "z_axis": [ 0.923, 0.340, -0.183 ], "quaternion": [ -0.089, 0.752, 0.163, 0.633 ] } }, { "index": 1477, "index_chain": 1477, "chain_name": "a", "nt_resnum": 1478, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1478", "linked_nts": [ "///a/1477", "///a/1479" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -63.227, "beta": 154.754, "gamma": 77.010, "delta": 80.070, "epsilon": -157.123, "zeta": -77.968, "epsilon_zeta": -79.155, "bb_type": "BI", "chi": -159.367, "glyco_bond": "anti", "C5prime_xyz": [ -1.469, 8.826, 0.480 ], "P_xyz": [ 0.956, 9.263, -0.397 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.757, "theta": -121.103, "eta_prime": -154.603, "theta_prime": -135.164, "eta_base": -94.209, "theta_base": -107.961, "v0": -0.879, "v1": -22.099, "v2": 35.406, "v3": -36.841, "v4": 23.825, "amplitude": 37.654, "phase_angle": 19.900, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.174, "filter_rmsd": 0.063, "frame": { "rmsd": 0.011, "origin": [ 227.366, 204.323, 246.230 ], "x_axis": [ 0.318, -0.801, 0.507 ], "y_axis": [ 0.056, -0.518, -0.853 ], "z_axis": [ 0.947, 0.300, -0.119 ], "quaternion": [ -0.412, 0.699, -0.266, 0.520 ] } }, { "index": 1478, "index_chain": 1478, "chain_name": "a", "nt_resnum": 1479, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1479", "linked_nts": [ "///a/1478", "///a/1480" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 142.601, "beta": -151.259, "gamma": -175.090, "delta": 80.992, "epsilon": -131.602, "zeta": -79.832, "epsilon_zeta": -51.770, "bb_type": "BI", "chi": -164.987, "glyco_bond": "anti", "C5prime_xyz": [ -1.340, 8.639, 0.868 ], "P_xyz": [ 0.021, 10.214, -0.696 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.585, "theta": -166.004, "eta_prime": -177.048, "theta_prime": -162.402, "eta_base": -125.636, "theta_base": -148.853, "v0": 2.803, "v1": -24.846, "v2": 36.412, "v3": -35.753, "v4": 20.756, "amplitude": 37.600, "phase_angle": 14.442, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.784, "filter_rmsd": 0.108, "frame": { "rmsd": 0.010, "origin": [ 230.294, 203.932, 248.226 ], "x_axis": [ 0.320, -0.947, -0.011 ], "y_axis": [ 0.131, 0.056, -0.990 ], "z_axis": [ 0.938, 0.316, 0.142 ], "quaternion": [ 0.616, -0.530, 0.385, -0.437 ] } }, { "index": 1479, "index_chain": 1479, "chain_name": "a", "nt_resnum": 1480, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1480", "linked_nts": [ "///a/1479", "///a/1481" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -53.129, "beta": -176.763, "gamma": 37.791, "delta": 77.484, "epsilon": -157.051, "zeta": -87.050, "epsilon_zeta": -70.001, "bb_type": "BI", "chi": -149.502, "glyco_bond": "anti", "C5prime_xyz": [ -1.728, 8.890, -0.146 ], "P_xyz": [ 0.582, 10.004, 0.283 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.884, "theta": -137.249, "eta_prime": 176.581, "theta_prime": -141.145, "eta_base": -163.785, "theta_base": -113.050, "v0": -2.720, "v1": -21.406, "v2": 35.937, "v3": -38.528, "v4": 26.069, "amplitude": 38.910, "phase_angle": 22.544, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.485, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 234.253, 204.676, 251.019 ], "x_axis": [ 0.005, -0.906, -0.424 ], "y_axis": [ -0.000, 0.424, -0.906 ], "z_axis": [ 1.000, 0.005, 0.002 ], "quaternion": [ 0.598, -0.381, 0.595, -0.378 ] } }, { "index": 1480, "index_chain": 1480, "chain_name": "a", "nt_resnum": 1481, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1481", "linked_nts": [ "///a/1480", "///a/1482" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": 140.008, "beta": -143.245, "gamma": -175.883, "delta": 80.376, "epsilon": -138.557, "zeta": -71.409, "epsilon_zeta": -67.148, "bb_type": "BI", "chi": -168.146, "glyco_bond": "anti", "C5prime_xyz": [ -1.320, 8.609, 0.959 ], "P_xyz": [ -0.124, 10.111, -0.834 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.789, "theta": -160.406, "eta_prime": -178.273, "theta_prime": -157.110, "eta_base": -134.060, "theta_base": -124.293, "v0": 3.568, "v1": -26.457, "v2": 38.029, "v3": -36.939, "v4": 21.125, "amplitude": 39.105, "phase_angle": 13.472, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.570, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 237.295, 202.491, 251.256 ], "x_axis": [ -0.002, -0.622, -0.783 ], "y_axis": [ 0.183, 0.769, -0.612 ], "z_axis": [ 0.983, -0.145, 0.113 ], "quaternion": [ 0.686, -0.170, 0.644, -0.294 ] } }, { "index": 1481, "index_chain": 1481, "chain_name": "a", "nt_resnum": 1482, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1482", "linked_nts": [ "///a/1481", "///a/1483" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -62.342, "beta": 171.572, "gamma": 59.636, "delta": 78.727, "epsilon": -142.669, "zeta": -81.769, "epsilon_zeta": -60.900, "bb_type": "BI", "chi": -163.177, "glyco_bond": "anti", "C5prime_xyz": [ -1.536, 8.770, 0.680 ], "P_xyz": [ 1.017, 9.340, 0.683 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.796, "theta": -149.007, "eta_prime": -171.127, "theta_prime": -147.862, "eta_base": -124.630, "theta_base": -120.229, "v0": 0.085, "v1": -23.428, "v2": 36.696, "v3": -37.566, "v4": 23.646, "amplitude": 38.686, "phase_angle": 18.459, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.892, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 240.786, 199.612, 250.429 ], "x_axis": [ 0.013, 0.024, -1.000 ], "y_axis": [ 0.174, 0.984, 0.026 ], "z_axis": [ 0.985, -0.175, 0.008 ], "quaternion": [ 0.708, 0.071, 0.701, -0.053 ] } }, { "index": 1482, "index_chain": 1482, "chain_name": "a", "nt_resnum": 1483, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1483", "linked_nts": [ "///a/1482", "///a/1484" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -54.444, "beta": 162.685, "gamma": 51.982, "delta": 77.952, "epsilon": -140.025, "zeta": -70.453, "epsilon_zeta": -69.572, "bb_type": "BI", "chi": -171.655, "glyco_bond": "anti", "C5prime_xyz": [ -1.575, 8.685, 1.188 ], "P_xyz": [ 0.963, 9.136, 1.576 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.650, "theta": -138.496, "eta_prime": -179.491, "theta_prime": -136.936, "eta_base": -137.946, "theta_base": -113.112, "v0": 0.712, "v1": -24.578, "v2": 37.849, "v3": -38.405, "v4": 23.733, "amplitude": 39.697, "phase_angle": 17.554, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.809, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 244.068, 197.795, 249.199 ], "x_axis": [ -0.155, 0.580, -0.800 ], "y_axis": [ 0.102, 0.815, 0.571 ], "z_axis": [ 0.983, 0.007, -0.186 ], "quaternion": [ 0.607, 0.232, 0.734, 0.197 ] } }, { "index": 1483, "index_chain": 1483, "chain_name": "a", "nt_resnum": 1484, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1484", "linked_nts": [ "///a/1483", "///a/1485" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -65.055, "beta": 163.306, "gamma": 72.928, "delta": 74.784, "epsilon": -140.067, "zeta": -70.576, "epsilon_zeta": -69.491, "bb_type": "BI", "chi": -149.134, "glyco_bond": "anti", "C5prime_xyz": [ -2.084, 8.885, -0.199 ], "P_xyz": [ 0.144, 9.823, -1.159 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.384, "theta": -143.180, "eta_prime": -167.831, "theta_prime": -145.721, "eta_base": -129.937, "theta_base": -116.188, "v0": -5.972, "v1": -19.093, "v2": 35.536, "v3": -39.948, "v4": 28.949, "amplitude": 39.890, "phase_angle": 27.021, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.386, "filter_rmsd": 0.099, "frame": { "rmsd": 0.008, "origin": [ 246.141, 197.075, 246.569 ], "x_axis": [ 0.165, 0.844, -0.510 ], "y_axis": [ 0.468, 0.388, 0.794 ], "z_axis": [ 0.868, -0.370, -0.331 ], "quaternion": [ 0.553, 0.526, 0.623, 0.170 ] } }, { "index": 1484, "index_chain": 1484, "chain_name": "a", "nt_resnum": 1485, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1485", "linked_nts": [ "///a/1484", "///a/1486" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end,multiplet", "alpha": -63.587, "beta": 168.282, "gamma": 50.726, "delta": 71.815, "epsilon": -102.668, "zeta": -108.540, "epsilon_zeta": 5.872, "bb_type": "--", "chi": -154.756, "glyco_bond": "anti", "C5prime_xyz": [ -1.829, 8.973, 0.112 ], "P_xyz": [ 0.544, 10.021, -0.099 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.492, "theta": -130.370, "eta_prime": 177.556, "theta_prime": -173.784, "eta_base": -142.497, "theta_base": 155.041, "v0": -4.218, "v1": -21.916, "v2": 38.378, "v3": -41.772, "v4": 29.033, "amplitude": 42.079, "phase_angle": 24.209, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.692, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 248.978, 197.739, 243.835 ], "x_axis": [ 0.007, 0.985, 0.174 ], "y_axis": [ 0.405, -0.162, 0.900 ], "z_axis": [ 0.914, 0.064, -0.400 ], "quaternion": [ 0.334, 0.626, 0.555, 0.434 ] } }, { "index": 1485, "index_chain": 1485, "chain_name": "a", "nt_resnum": 1486, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1486", "linked_nts": [ "///a/1485", "///a/1487" ], "nt_type": "RNA", "dbn": ".", "summary": "BII,non-stack", "alpha": 72.637, "beta": -137.822, "gamma": 105.749, "delta": 149.945, "epsilon": -94.678, "zeta": 134.985, "epsilon_zeta": 130.337, "bb_type": "BII", "chi": -64.391, "glyco_bond": "--", "C5prime_xyz": [ -2.649, 6.470, -3.166 ], "P_xyz": [ -0.160, 5.857, -3.733 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 23.075, "theta": -166.325, "eta_prime": 60.861, "theta_prime": 177.952, "eta_base": 30.474, "theta_base": -100.120, "v0": -12.565, "v1": 28.489, "v2": -32.543, "v3": 26.100, "v4": -8.734, "amplitude": 32.605, "phase_angle": 176.446, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.034, "frame": { "rmsd": 0.008, "origin": [ 260.304, 189.285, 248.765 ], "x_axis": [ -0.465, -0.545, 0.698 ], "y_axis": [ -0.870, 0.426, -0.248 ], "z_axis": [ -0.162, -0.723, -0.672 ], "quaternion": [ -0.269, -0.442, 0.800, -0.303 ] } }, { "index": 1486, "index_chain": 1486, "chain_name": "a", "nt_resnum": 1487, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1487", "linked_nts": [ "///a/1486", "///a/1488" ], "nt_type": "RNA", "dbn": ".", "summary": "non-stack,non-canonical,multiplet", "alpha": -25.300, "beta": 98.661, "gamma": 70.814, "delta": 86.101, "epsilon": -108.200, "zeta": -46.022, "epsilon_zeta": -62.178, "bb_type": "--", "chi": -50.659, "glyco_bond": "--", "C5prime_xyz": [ -3.448, 5.295, -3.425 ], "P_xyz": [ -2.715, 2.767, -3.313 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -127.078, "theta": -73.391, "eta_prime": -114.052, "theta_prime": -81.980, "eta_base": -101.790, "theta_base": -82.483, "v0": 8.451, "v1": -29.230, "v2": 37.613, "v3": -33.798, "v4": 16.092, "amplitude": 37.822, "phase_angle": 6.021, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.038, "frame": { "rmsd": 0.001, "origin": [ 250.963, 194.183, 241.171 ], "x_axis": [ -0.462, 0.380, -0.801 ], "y_axis": [ 0.875, 0.044, -0.483 ], "z_axis": [ -0.148, -0.924, -0.353 ], "quaternion": [ 0.240, 0.460, 0.682, -0.516 ] } }, { "index": 1487, "index_chain": 1487, "chain_name": "a", "nt_resnum": 1488, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1488", "linked_nts": [ "///a/1487", "///a/1489" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix", "alpha": -62.974, "beta": -176.834, "gamma": 51.366, "delta": 83.400, "epsilon": -135.207, "zeta": -86.436, "epsilon_zeta": -48.771, "bb_type": "BI", "chi": -179.240, "glyco_bond": "anti", "C5prime_xyz": [ -1.440, 8.425, 1.617 ], "P_xyz": [ 1.023, 8.587, 2.543 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.111, "theta": -147.290, "eta_prime": -161.128, "theta_prime": -142.421, "eta_base": -132.008, "theta_base": -127.251, "v0": 4.991, "v1": -27.565, "v2": 38.350, "v3": -36.525, "v4": 19.965, "amplitude": 39.131, "phase_angle": 11.463, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.169, "filter_rmsd": 0.003, "frame": { "rmsd": 0.003, "origin": [ 252.555, 202.283, 239.545 ], "x_axis": [ 0.120, -0.009, 0.993 ], "y_axis": [ 0.620, -0.780, -0.082 ], "z_axis": [ 0.775, 0.625, -0.088 ], "quaternion": [ -0.251, 0.705, 0.217, 0.627 ] } }, { "index": 1488, "index_chain": 1488, "chain_name": "a", "nt_resnum": 1489, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1489", "linked_nts": [ "///a/1488", "///a/1490" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -69.630, "beta": 169.195, "gamma": 62.639, "delta": 83.559, "epsilon": -145.046, "zeta": -82.415, "epsilon_zeta": -62.630, "bb_type": "BI", "chi": -160.061, "glyco_bond": "anti", "C5prime_xyz": [ -1.558, 8.787, 0.483 ], "P_xyz": [ 1.026, 9.298, 0.382 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.911, "theta": -146.568, "eta_prime": -178.231, "theta_prime": -146.034, "eta_base": -154.247, "theta_base": -115.489, "v0": -1.571, "v1": -21.829, "v2": 35.476, "v3": -37.391, "v4": 24.612, "amplitude": 37.981, "phase_angle": 20.924, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.700, "filter_rmsd": 0.105, "frame": { "rmsd": 0.002, "origin": [ 253.314, 205.769, 239.499 ], "x_axis": [ 0.367, -0.403, 0.838 ], "y_axis": [ 0.619, -0.566, -0.544 ], "z_axis": [ 0.694, 0.719, 0.042 ], "quaternion": [ -0.459, 0.688, 0.079, 0.557 ] } }, { "index": 1489, "index_chain": 1489, "chain_name": "a", "nt_resnum": 1490, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1490", "linked_nts": [ "///a/1489", "///a/1491" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end,multiplet", "alpha": -50.661, "beta": 169.137, "gamma": 41.449, "delta": 84.879, "epsilon": -114.575, "zeta": -52.253, "epsilon_zeta": -62.322, "bb_type": "--", "chi": -158.437, "glyco_bond": "anti", "C5prime_xyz": [ -1.237, 8.754, 0.432 ], "P_xyz": [ 1.351, 9.075, 0.801 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.430, "theta": -117.688, "eta_prime": -172.245, "theta_prime": -126.306, "eta_base": -133.581, "theta_base": -115.229, "v0": 3.310, "v1": -25.683, "v2": 36.921, "v3": -36.046, "v4": 20.756, "amplitude": 38.011, "phase_angle": 13.752, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.616, "filter_rmsd": 0.063, "frame": { "rmsd": 0.001, "origin": [ 256.012, 208.407, 241.083 ], "x_axis": [ 0.516, -0.793, 0.324 ], "y_axis": [ 0.270, -0.209, -0.940 ], "z_axis": [ 0.813, 0.573, 0.106 ], "quaternion": [ 0.594, -0.636, 0.205, -0.447 ] } }, { "index": 1490, "index_chain": 1490, "chain_name": "a", "nt_resnum": 1491, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1491", "linked_nts": [ "///a/1490", "///a/1492" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -111.340, "beta": 99.518, "gamma": 144.664, "delta": 83.959, "epsilon": -140.252, "zeta": -53.025, "epsilon_zeta": -87.227, "bb_type": "BI", "chi": -173.403, "glyco_bond": "anti", "C5prime_xyz": [ -1.271, 8.546, 1.311 ], "P_xyz": [ -0.757, 10.174, -0.676 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.528, "theta": -164.454, "eta_prime": -175.478, "theta_prime": -146.989, "eta_base": -147.901, "theta_base": -103.843, "v0": 2.305, "v1": -23.697, "v2": 34.768, "v3": -34.430, "v4": 20.359, "amplitude": 36.004, "phase_angle": 15.058, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.010, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 258.924, 209.626, 243.085 ], "x_axis": [ 0.432, -0.902, 0.014 ], "y_axis": [ 0.228, 0.094, -0.969 ], "z_axis": [ 0.872, 0.422, 0.246 ], "quaternion": [ 0.666, -0.522, 0.322, -0.424 ] } }, { "index": 1491, "index_chain": 1491, "chain_name": "a", "nt_resnum": 1492, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1492", "linked_nts": [ "///a/1491", "///a/1493" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -80.592, "beta": -162.840, "gamma": 64.363, "delta": 144.888, "epsilon": -76.753, "zeta": 100.640, "epsilon_zeta": 182.607, "bb_type": "--", "chi": -127.167, "glyco_bond": "anti", "C5prime_xyz": [ -1.711, 8.613, -0.872 ], "P_xyz": [ 0.556, 9.371, 0.192 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -161.468, "theta": 138.717, "eta_prime": -129.128, "theta_prime": 129.612, "eta_base": -85.026, "theta_base": 152.919, "v0": -21.054, "v1": 34.623, "v2": -34.367, "v3": 23.107, "v4": -1.571, "amplitude": 35.812, "phase_angle": 163.665, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.472, "filter_rmsd": 0.102, "frame": { "rmsd": 0.013, "origin": [ 262.989, 208.191, 243.761 ], "x_axis": [ -0.003, -0.607, -0.794 ], "y_axis": [ -0.024, 0.794, -0.607 ], "z_axis": [ 1.000, 0.017, -0.018 ], "quaternion": [ 0.666, -0.234, 0.674, -0.219 ] } }, { "index": 1492, "index_chain": 1492, "chain_name": "a", "nt_resnum": 1493, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1493", "linked_nts": [ "///a/1492", "///a/1494" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": 169.338, "beta": -137.505, "gamma": 75.831, "delta": 82.546, "epsilon": -138.573, "zeta": -71.962, "epsilon_zeta": -66.611, "bb_type": "BI", "chi": -178.501, "glyco_bond": "anti", "C5prime_xyz": [ -1.397, 8.427, 1.577 ], "P_xyz": [ 0.952, 8.090, 2.686 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.491, "theta": -130.069, "eta_prime": 140.325, "theta_prime": -126.564, "eta_base": 162.453, "theta_base": -100.741, "v0": 1.044, "v1": -23.144, "v2": 35.206, "v3": -35.463, "v4": 21.745, "amplitude": 36.804, "phase_angle": 16.948, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "6g", "suiteness": 0.041, "filter_rmsd": 0.041, "frame": { "rmsd": 0.013, "origin": [ 260.561, 212.042, 248.608 ], "x_axis": [ 0.524, -0.581, -0.623 ], "y_axis": [ -0.034, 0.716, -0.697 ], "z_axis": [ 0.851, 0.387, 0.355 ], "quaternion": [ 0.805, -0.336, 0.457, -0.170 ] } }, { "index": 1493, "index_chain": 1493, "chain_name": "a", "nt_resnum": 1494, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1494", "linked_nts": [ "///a/1493", "///a/1495" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -64.693, "beta": -179.619, "gamma": 54.628, "delta": 79.003, "epsilon": -143.173, "zeta": -75.516, "epsilon_zeta": -67.657, "bb_type": "BI", "chi": -155.212, "glyco_bond": "anti", "C5prime_xyz": [ -1.368, 8.729, 0.233 ], "P_xyz": [ 1.180, 9.261, 0.284 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.641, "theta": -146.546, "eta_prime": -173.481, "theta_prime": -143.097, "eta_base": -132.651, "theta_base": -121.498, "v0": 1.536, "v1": -24.868, "v2": 37.589, "v3": -37.648, "v4": 22.800, "amplitude": 39.183, "phase_angle": 16.398, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.931, "filter_rmsd": 0.040, "frame": { "rmsd": 0.017, "origin": [ 264.715, 211.710, 250.381 ], "x_axis": [ 0.478, 0.024, -0.878 ], "y_axis": [ -0.335, 0.929, -0.157 ], "z_axis": [ 0.812, 0.369, 0.452 ], "quaternion": [ 0.845, -0.156, 0.500, 0.106 ] } }, { "index": 1494, "index_chain": 1494, "chain_name": "a", "nt_resnum": 1495, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1495", "linked_nts": [ "///a/1494", "///a/1496" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix", "alpha": -68.753, "beta": 173.802, "gamma": 60.317, "delta": 81.962, "epsilon": -100.152, "zeta": -121.250, "epsilon_zeta": 21.099, "bb_type": "--", "chi": -153.399, "glyco_bond": "anti", "C5prime_xyz": [ -1.647, 8.841, 0.087 ], "P_xyz": [ 0.862, 9.473, -0.090 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -177.884, "theta": -111.105, "eta_prime": -170.099, "theta_prime": -109.345, "eta_base": -144.329, "theta_base": -129.849, "v0": -2.267, "v1": -20.827, "v2": 34.575, "v3": -36.847, "v4": 24.707, "amplitude": 37.291, "phase_angle": 22.000, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.895, "filter_rmsd": 0.064, "frame": { "rmsd": 0.013, "origin": [ 268.477, 211.833, 250.930 ], "x_axis": [ -0.004, 0.342, -0.940 ], "y_axis": [ -0.403, 0.860, 0.315 ], "z_axis": [ 0.915, 0.379, 0.135 ], "quaternion": [ 0.705, -0.023, 0.657, 0.264 ] } }, { "index": 1495, "index_chain": 1495, "chain_name": "a", "nt_resnum": 1496, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1496", "linked_nts": [ "///a/1495", "///a/1497" ], "nt_type": "RNA", "dbn": ".", "summary": "BI,non-canonical,helix-end,multiplet", "alpha": 60.353, "beta": 144.152, "gamma": -55.162, "delta": 146.243, "epsilon": -139.760, "zeta": -46.711, "epsilon_zeta": -93.049, "bb_type": "BI", "chi": -53.830, "glyco_bond": "--", "C5prime_xyz": [ -3.575, 6.255, -3.102 ], "P_xyz": [ -3.223, 8.175, -4.823 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.054, "theta": -52.536, "eta_prime": 178.229, "theta_prime": -106.216, "eta_base": 167.542, "theta_base": -138.066, "v0": -23.085, "v1": 36.080, "v2": -34.546, "v3": 22.106, "v4": 0.440, "amplitude": 36.631, "phase_angle": 160.573, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32m", "cluster": "7r", "suiteness": 0.273, "filter_rmsd": 0.044, "frame": { "rmsd": 0.015, "origin": [ 274.879, 214.463, 251.240 ], "x_axis": [ -0.315, -0.045, -0.948 ], "y_axis": [ -0.427, 0.899, 0.099 ], "z_axis": [ 0.848, 0.436, -0.302 ], "quaternion": [ 0.566, -0.149, 0.793, 0.168 ] } }, { "index": 1496, "index_chain": 1496, "chain_name": "a", "nt_resnum": 1497, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1497", "linked_nts": [ "///a/1496", "///a/1498" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": 131.855, "beta": 158.307, "gamma": 47.714, "delta": 139.783, "epsilon": -158.802, "zeta": 58.156, "epsilon_zeta": 143.042, "bb_type": "--", "chi": -107.313, "glyco_bond": "anti", "C5prime_xyz": [ -2.696, 8.244, -1.868 ], "P_xyz": [ -0.367, 9.339, -2.213 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -30.530, "theta": 10.712, "eta_prime": 48.431, "theta_prime": -38.515, "eta_base": 69.280, "theta_base": -46.151, "v0": -27.543, "v1": 38.806, "v2": -34.588, "v3": 19.547, "v4": 4.710, "amplitude": 38.425, "phase_angle": 154.177, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.011, "origin": [ 276.164, 231.080, 251.876 ], "x_axis": [ 0.949, -0.214, 0.231 ], "y_axis": [ -0.272, -0.926, 0.261 ], "z_axis": [ 0.158, -0.311, -0.937 ], "quaternion": [ 0.147, 0.976, -0.124, 0.100 ] } }, { "index": 1497, "index_chain": 1497, "chain_name": "a", "nt_resnum": 1498, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1498", "linked_nts": [ "///a/1497", "///a/1499" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,canonical,helix", "alpha": -102.349, "beta": -86.350, "gamma": -51.954, "delta": 154.490, "epsilon": -148.232, "zeta": 101.979, "epsilon_zeta": 109.790, "bb_type": "--", "chi": -108.310, "glyco_bond": "anti", "C5prime_xyz": [ -1.415, 8.035, -1.650 ], "P_xyz": [ -2.002, 10.478, -2.375 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.691, "theta": 67.371, "eta_prime": -167.121, "theta_prime": 70.690, "eta_base": -147.594, "theta_base": 79.281, "v0": -11.626, "v1": 29.414, "v2": -34.866, "v3": 29.074, "v4": -11.210, "amplitude": 34.866, "phase_angle": 179.596, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.023, "frame": { "rmsd": 0.023, "origin": [ 271.223, 213.833, 251.486 ], "x_axis": [ 0.036, -0.086, 0.996 ], "y_axis": [ -0.383, 0.919, 0.093 ], "z_axis": [ -0.923, -0.384, -0.000 ], "quaternion": [ 0.699, 0.171, -0.686, 0.106 ] } }, { "index": 1498, "index_chain": 1498, "chain_name": "a", "nt_resnum": 1499, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1499", "linked_nts": [ "///a/1498", "///a/1500" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": 89.152, "beta": -110.690, "gamma": 176.051, "delta": 91.943, "epsilon": -87.512, "zeta": 114.195, "epsilon_zeta": 158.293, "bb_type": "--", "chi": -101.337, "glyco_bond": "anti", "C5prime_xyz": [ -2.309, 7.744, -2.575 ], "P_xyz": [ -1.885, 6.191, -4.635 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -170.612, "theta": 90.859, "eta_prime": -178.887, "theta_prime": 51.386, "eta_base": 178.075, "theta_base": -9.626, "v0": -2.550, "v1": -15.255, "v2": 25.982, "v3": -28.171, "v4": 19.488, "amplitude": 28.356, "phase_angle": 23.612, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 273.280, 217.513, 247.116 ], "x_axis": [ -0.191, -0.812, -0.551 ], "y_axis": [ -0.584, 0.545, -0.601 ], "z_axis": [ 0.789, 0.207, -0.579 ], "quaternion": [ 0.440, -0.459, 0.761, -0.130 ] } }, { "index": 1499, "index_chain": 1499, "chain_name": "a", "nt_resnum": 1500, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1500", "linked_nts": [ "///a/1499", "///a/1501" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": 53.690, "beta": 176.500, "gamma": 77.063, "delta": 148.920, "epsilon": -105.884, "zeta": -75.326, "epsilon_zeta": -30.558, "bb_type": "--", "chi": -121.136, "glyco_bond": "anti", "C5prime_xyz": [ -1.959, 8.500, -1.175 ], "P_xyz": [ 0.592, 9.110, -1.060 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 17.149, "theta": -62.035, "eta_prime": 43.665, "theta_prime": -116.574, "eta_base": 85.685, "theta_base": -144.492, "v0": -21.963, "v1": 36.848, "v2": -36.670, "v3": 24.935, "v4": -2.077, "amplitude": 38.098, "phase_angle": 164.265, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.099, "frame": { "rmsd": 0.015, "origin": [ 259.153, 228.422, 242.758 ], "x_axis": [ -0.213, -0.760, -0.614 ], "y_axis": [ 0.935, -0.341, 0.099 ], "z_axis": [ -0.284, -0.553, 0.783 ], "quaternion": [ 0.554, 0.294, 0.149, -0.764 ] } }, { "index": 1500, "index_chain": 1500, "chain_name": "a", "nt_resnum": 1501, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1501", "linked_nts": [ "///a/1500", "///a/1502" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -65.330, "beta": -168.661, "gamma": -146.254, "delta": 82.880, "epsilon": -140.471, "zeta": -105.346, "epsilon_zeta": -35.126, "bb_type": "BI", "chi": -156.269, "glyco_bond": "anti", "C5prime_xyz": [ -1.373, 8.701, 0.308 ], "P_xyz": [ -0.846, 10.897, -1.016 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -20.853, "theta": -172.831, "eta_prime": 15.913, "theta_prime": -168.421, "eta_base": 49.232, "theta_base": -139.748, "v0": 1.085, "v1": -23.038, "v2": 34.813, "v3": -35.219, "v4": 21.591, "amplitude": 36.397, "phase_angle": 16.966, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.015, "origin": [ 263.279, 230.637, 258.041 ], "x_axis": [ -0.496, 0.845, -0.201 ], "y_axis": [ 0.278, -0.065, -0.958 ], "z_axis": [ -0.823, -0.531, -0.202 ], "quaternion": [ -0.243, 0.439, 0.639, -0.583 ] } }, { "index": 1501, "index_chain": 1501, "chain_name": "a", "nt_resnum": 1502, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1502", "linked_nts": [ "///a/1501", "///a/1503" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 131.734, "beta": -130.850, "gamma": -174.608, "delta": 84.055, "epsilon": -131.995, "zeta": -107.348, "epsilon_zeta": -24.647, "bb_type": "--", "chi": -165.980, "glyco_bond": "anti", "C5prime_xyz": [ -1.288, 8.658, 0.906 ], "P_xyz": [ 0.171, 9.803, -0.920 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.294, "theta": -143.711, "eta_prime": -177.632, "theta_prime": -149.558, "eta_base": -140.305, "theta_base": -111.753, "v0": 1.797, "v1": -22.825, "v2": 33.964, "v3": -33.896, "v4": 20.321, "amplitude": 35.299, "phase_angle": 15.808, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.075, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 259.860, 230.242, 258.330 ], "x_axis": [ -0.247, 0.773, -0.584 ], "y_axis": [ 0.265, -0.525, -0.809 ], "z_axis": [ -0.932, -0.355, -0.075 ], "quaternion": [ 0.195, -0.582, -0.446, 0.651 ] } }, { "index": 1502, "index_chain": 1502, "chain_name": "a", "nt_resnum": 1503, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1503", "linked_nts": [ "///a/1502", "///a/1504" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 133.799, "beta": -120.792, "gamma": 175.839, "delta": 79.011, "epsilon": -120.460, "zeta": -84.814, "epsilon_zeta": -35.645, "bb_type": "--", "chi": -160.299, "glyco_bond": "anti", "C5prime_xyz": [ -1.504, 8.816, 0.531 ], "P_xyz": [ -0.128, 9.506, -1.581 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.325, "theta": -150.560, "eta_prime": -179.410, "theta_prime": -152.566, "eta_base": -123.742, "theta_base": -131.727, "v0": -0.658, "v1": -22.925, "v2": 36.497, "v3": -37.871, "v4": 24.306, "amplitude": 38.733, "phase_angle": 19.561, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.010, "filter_rmsd": 0.064, "frame": { "rmsd": 0.016, "origin": [ 257.150, 231.174, 257.515 ], "x_axis": [ -0.158, 0.371, -0.915 ], "y_axis": [ -0.026, -0.928, -0.371 ], "z_axis": [ -0.987, -0.034, 0.156 ], "quaternion": [ 0.133, -0.635, -0.135, 0.749 ] } }, { "index": 1503, "index_chain": 1503, "chain_name": "a", "nt_resnum": 1504, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1504", "linked_nts": [ "///a/1503", "///a/1505" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -67.298, "beta": 173.862, "gamma": 49.103, "delta": 79.143, "epsilon": -147.546, "zeta": -74.740, "epsilon_zeta": -72.806, "bb_type": "BI", "chi": -150.354, "glyco_bond": "anti", "C5prime_xyz": [ -1.717, 8.833, -0.076 ], "P_xyz": [ 0.780, 9.568, -0.084 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.214, "theta": -149.197, "eta_prime": 170.173, "theta_prime": -148.544, "eta_base": -156.204, "theta_base": -120.876, "v0": -1.600, "v1": -22.270, "v2": 36.265, "v3": -38.133, "v4": 25.018, "amplitude": 38.803, "phase_angle": 20.838, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.527, "filter_rmsd": 0.064, "frame": { "rmsd": 0.012, "origin": [ 252.891, 232.313, 256.635 ], "x_axis": [ 0.397, -0.162, -0.904 ], "y_axis": [ -0.013, -0.985, 0.170 ], "z_axis": [ -0.918, -0.055, -0.393 ], "quaternion": [ 0.068, 0.833, -0.052, -0.547 ] } }, { "index": 1504, "index_chain": 1504, "chain_name": "a", "nt_resnum": 1505, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1505", "linked_nts": [ "///a/1504", "///a/1506" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -73.247, "beta": 164.363, "gamma": 69.232, "delta": 74.778, "epsilon": -128.092, "zeta": -72.742, "epsilon_zeta": -55.350, "bb_type": "BI", "chi": -167.503, "glyco_bond": "anti", "C5prime_xyz": [ -1.432, 8.738, 0.920 ], "P_xyz": [ 1.058, 9.365, 0.505 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.675, "theta": -134.619, "eta_prime": 179.499, "theta_prime": -132.608, "eta_base": -140.565, "theta_base": -92.146, "v0": 1.206, "v1": -26.670, "v2": 40.760, "v3": -41.022, "v4": 25.108, "amplitude": 42.613, "phase_angle": 16.958, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.535, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 249.686, 232.494, 253.453 ], "x_axis": [ 0.515, -0.634, -0.577 ], "y_axis": [ -0.191, -0.741, 0.644 ], "z_axis": [ -0.836, -0.222, -0.502 ], "quaternion": [ 0.261, 0.830, -0.248, -0.425 ] } }, { "index": 1505, "index_chain": 1505, "chain_name": "a", "nt_resnum": 1506, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1506", "linked_nts": [ "///a/1505", "///a/1507" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -67.716, "beta": 165.620, "gamma": 64.589, "delta": 77.297, "epsilon": -149.744, "zeta": -78.625, "epsilon_zeta": -71.120, "bb_type": "BI", "chi": -156.116, "glyco_bond": "anti", "C5prime_xyz": [ -1.660, 8.803, 0.251 ], "P_xyz": [ 0.828, 9.443, -0.195 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.766, "theta": -154.871, "eta_prime": -177.868, "theta_prime": -157.939, "eta_base": -118.910, "theta_base": -153.245, "v0": -0.446, "v1": -24.266, "v2": 38.337, "v3": -39.581, "v4": 25.201, "amplitude": 40.582, "phase_angle": 19.145, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.595, "filter_rmsd": 0.108, "frame": { "rmsd": 0.017, "origin": [ 249.316, 230.453, 250.229 ], "x_axis": [ 0.408, -0.906, 0.110 ], "y_axis": [ -0.681, -0.222, 0.698 ], "z_axis": [ -0.608, -0.360, -0.708 ], "quaternion": [ 0.346, 0.765, -0.519, -0.163 ] } }, { "index": 1506, "index_chain": 1506, "chain_name": "a", "nt_resnum": 1507, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1507", "linked_nts": [ "///a/1506", "///a/1508" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -74.361, "beta": 162.601, "gamma": 71.744, "delta": 75.468, "epsilon": -147.595, "zeta": -71.680, "epsilon_zeta": -75.915, "bb_type": "BI", "chi": -149.990, "glyco_bond": "anti", "C5prime_xyz": [ -1.854, 8.797, -0.172 ], "P_xyz": [ 0.403, 9.504, -1.251 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.220, "theta": -148.884, "eta_prime": 176.188, "theta_prime": -152.684, "eta_base": -166.747, "theta_base": -128.857, "v0": -1.493, "v1": -23.952, "v2": 38.912, "v3": -40.750, "v4": 26.632, "amplitude": 41.559, "phase_angle": 20.562, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.424, "filter_rmsd": 0.043, "frame": { "rmsd": 0.017, "origin": [ 248.828, 230.165, 247.094 ], "x_axis": [ 0.179, -0.942, 0.285 ], "y_axis": [ -0.918, -0.056, 0.393 ], "z_axis": [ -0.354, -0.332, -0.874 ], "quaternion": [ 0.249, 0.726, -0.640, -0.024 ] } }, { "index": 1507, "index_chain": 1507, "chain_name": "a", "nt_resnum": 1508, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1508", "linked_nts": [ "///a/1507", "///a/1509" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -74.191, "beta": 170.880, "gamma": 59.218, "delta": 75.196, "epsilon": -146.730, "zeta": -70.904, "epsilon_zeta": -75.826, "bb_type": "BI", "chi": -160.233, "glyco_bond": "anti", "C5prime_xyz": [ -1.585, 8.829, 0.488 ], "P_xyz": [ 0.888, 9.578, 0.225 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.136, "theta": -148.247, "eta_prime": 170.607, "theta_prime": -147.921, "eta_base": -149.499, "theta_base": -121.828, "v0": 0.867, "v1": -26.292, "v2": 40.388, "v3": -40.887, "v4": 25.180, "amplitude": 42.320, "phase_angle": 17.381, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.782, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 248.925, 227.615, 244.463 ], "x_axis": [ -0.171, -0.640, 0.749 ], "y_axis": [ -0.924, 0.369, 0.104 ], "z_axis": [ -0.343, -0.674, -0.654 ], "quaternion": [ -0.369, -0.528, 0.741, -0.192 ] } }, { "index": 1508, "index_chain": 1508, "chain_name": "a", "nt_resnum": 1509, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1509", "linked_nts": [ "///a/1508", "///a/1510" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -68.649, "beta": 166.923, "gamma": 69.479, "delta": 75.859, "epsilon": -146.141, "zeta": -74.365, "epsilon_zeta": -71.776, "bb_type": "BI", "chi": -176.297, "glyco_bond": "anti", "C5prime_xyz": [ -1.669, 8.690, 1.403 ], "P_xyz": [ 0.815, 9.448, 1.603 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.452, "theta": -150.094, "eta_prime": -175.109, "theta_prime": -148.619, "eta_base": -133.643, "theta_base": -123.385, "v0": -2.502, "v1": -22.300, "v2": 37.186, "v3": -39.641, "v4": 26.554, "amplitude": 40.126, "phase_angle": 22.068, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.525, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 248.800, 223.494, 243.328 ], "x_axis": [ -0.508, -0.138, 0.850 ], "y_axis": [ -0.668, 0.686, -0.288 ], "z_axis": [ -0.543, -0.715, -0.440 ], "quaternion": [ -0.429, -0.248, 0.812, -0.309 ] } }, { "index": 1509, "index_chain": 1509, "chain_name": "a", "nt_resnum": 1510, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1510", "linked_nts": [ "///a/1509", "///a/1511" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -65.865, "beta": 165.002, "gamma": 68.187, "delta": 76.754, "epsilon": -133.002, "zeta": -73.935, "epsilon_zeta": -59.067, "bb_type": "BI", "chi": -163.247, "glyco_bond": "anti", "C5prime_xyz": [ -1.596, 8.757, 0.667 ], "P_xyz": [ 0.883, 9.421, 0.190 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.396, "theta": -139.859, "eta_prime": -171.809, "theta_prime": -163.514, "eta_base": -133.103, "theta_base": 159.026, "v0": 1.190, "v1": -25.675, "v2": 39.053, "v3": -39.427, "v4": 24.010, "amplitude": 40.821, "phase_angle": 16.924, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.588, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 247.988, 219.697, 243.125 ], "x_axis": [ -0.890, 0.025, 0.455 ], "y_axis": [ -0.358, 0.581, -0.731 ], "z_axis": [ -0.282, -0.814, -0.508 ], "quaternion": [ -0.214, -0.096, 0.863, -0.448 ] } }, { "index": 1510, "index_chain": 1510, "chain_name": "a", "nt_resnum": 1511, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1511", "linked_nts": [ "///a/1510", "///a/1512" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": -71.077, "beta": -150.314, "gamma": -85.707, "delta": 85.064, "epsilon": -126.450, "zeta": -72.538, "epsilon_zeta": -53.912, "bb_type": "--", "chi": -161.158, "glyco_bond": "anti", "C5prime_xyz": [ -1.160, 8.635, 0.658 ], "P_xyz": [ -0.859, 11.222, 0.807 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 50.793, "theta": -174.141, "eta_prime": 46.304, "theta_prime": -157.660, "eta_base": 24.227, "theta_base": -98.529, "v0": 4.904, "v1": -25.347, "v2": 34.952, "v3": -33.140, "v4": 17.882, "amplitude": 35.598, "phase_angle": 10.928, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 255.083, 213.318, 236.077 ], "x_axis": [ 0.684, 0.715, -0.145 ], "y_axis": [ -0.727, 0.650, -0.224 ], "z_axis": [ -0.066, 0.258, 0.964 ], "quaternion": [ 0.908, -0.133, 0.022, 0.397 ] } }, { "index": 1511, "index_chain": 1511, "chain_name": "a", "nt_resnum": 1512, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1512", "linked_nts": [ "///a/1511", "///a/1513" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -63.691, "beta": 164.125, "gamma": 51.911, "delta": 78.721, "epsilon": -143.999, "zeta": -65.411, "epsilon_zeta": -78.589, "bb_type": "BI", "chi": -147.778, "glyco_bond": "anti", "C5prime_xyz": [ -1.438, 8.723, -0.213 ], "P_xyz": [ 1.110, 9.072, -0.634 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.565, "theta": -142.815, "eta_prime": 178.400, "theta_prime": -149.674, "eta_base": -117.920, "theta_base": -148.193, "v0": 2.277, "v1": -25.942, "v2": 38.543, "v3": -38.191, "v4": 22.638, "amplitude": 39.973, "phase_angle": 15.371, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.700, "filter_rmsd": 0.039, "frame": { "rmsd": 0.012, "origin": [ 256.436, 216.316, 238.081 ], "x_axis": [ -0.050, 0.895, -0.444 ], "y_axis": [ -0.976, 0.050, 0.210 ], "z_axis": [ 0.210, 0.444, 0.871 ], "quaternion": [ 0.684, -0.085, 0.239, 0.684 ] } }, { "index": 1512, "index_chain": 1512, "chain_name": "a", "nt_resnum": 1513, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1513", "linked_nts": [ "///a/1512", "///a/1514" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -114.859, "beta": 140.837, "gamma": 121.946, "delta": 78.306, "epsilon": -138.723, "zeta": 24.140, "epsilon_zeta": 197.138, "bb_type": "--", "chi": -148.701, "glyco_bond": "anti", "C5prime_xyz": [ -1.330, 8.716, -0.157 ], "P_xyz": [ -0.263, 9.455, -2.420 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.620, "theta": -71.135, "eta_prime": 178.571, "theta_prime": -63.978, "eta_base": -164.968, "theta_base": -41.459, "v0": 3.508, "v1": -27.168, "v2": 39.218, "v3": -38.145, "v4": 21.878, "amplitude": 40.361, "phase_angle": 13.666, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.012, "origin": [ 258.487, 217.500, 240.118 ], "x_axis": [ -0.208, 0.920, -0.333 ], "y_axis": [ -0.798, 0.037, 0.601 ], "z_axis": [ 0.565, 0.391, 0.727 ], "quaternion": [ 0.624, 0.084, 0.360, 0.689 ] } }, { "index": 1513, "index_chain": 1513, "chain_name": "a", "nt_resnum": 1514, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1514", "linked_nts": [ "///a/1513", "///a/1515" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -131.789, "beta": 148.308, "gamma": 128.882, "delta": 87.202, "epsilon": -143.529, "zeta": -83.299, "epsilon_zeta": -60.230, "bb_type": "BI", "chi": -153.348, "glyco_bond": "anti", "C5prime_xyz": [ -1.272, 8.747, 0.157 ], "P_xyz": [ 0.215, 9.650, -1.795 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.454, "theta": -168.084, "eta_prime": -129.550, "theta_prime": -167.291, "eta_base": -67.589, "theta_base": -149.296, "v0": 0.952, "v1": -20.667, "v2": 31.316, "v3": -31.699, "v4": 19.442, "amplitude": 32.752, "phase_angle": 17.030, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.065, "frame": { "rmsd": 0.013, "origin": [ 248.068, 222.895, 243.547 ], "x_axis": [ -0.574, -0.010, 0.819 ], "y_axis": [ 0.763, -0.370, 0.530 ], "z_axis": [ 0.298, 0.929, 0.220 ], "quaternion": [ -0.263, 0.379, 0.496, 0.736 ] } }, { "index": 1514, "index_chain": 1514, "chain_name": "a", "nt_resnum": 1515, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1515", "linked_nts": [ "///a/1514", "///a/1516" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -59.278, "beta": 171.819, "gamma": 48.222, "delta": 83.283, "epsilon": -147.787, "zeta": -73.480, "epsilon_zeta": -74.306, "bb_type": "BI", "chi": -152.058, "glyco_bond": "anti", "C5prime_xyz": [ -1.478, 8.839, 0.069 ], "P_xyz": [ 1.069, 9.393, 0.273 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.287, "theta": -144.335, "eta_prime": -179.908, "theta_prime": -143.782, "eta_base": -153.648, "theta_base": -122.910, "v0": -1.328, "v1": -20.348, "v2": 33.014, "v3": -34.660, "v4": 22.711, "amplitude": 35.287, "phase_angle": 20.679, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.803, "filter_rmsd": 0.068, "frame": { "rmsd": 0.015, "origin": [ 248.515, 227.273, 244.134 ], "x_axis": [ -0.258, -0.413, 0.873 ], "y_axis": [ 0.931, -0.349, 0.110 ], "z_axis": [ 0.259, 0.841, 0.474 ], "quaternion": [ -0.466, 0.392, 0.330, 0.721 ] } }, { "index": 1515, "index_chain": 1515, "chain_name": "a", "nt_resnum": 1516, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1516", "linked_nts": [ "///a/1515", "///a/1517" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -75.209, "beta": 167.941, "gamma": 65.581, "delta": 78.672, "epsilon": -149.825, "zeta": -71.284, "epsilon_zeta": -78.541, "bb_type": "BI", "chi": -148.575, "glyco_bond": "anti", "C5prime_xyz": [ -1.837, 8.811, -0.202 ], "P_xyz": [ 0.562, 9.513, -0.898 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.009, "theta": -146.527, "eta_prime": 178.687, "theta_prime": -147.702, "eta_base": -147.798, "theta_base": -124.220, "v0": -2.454, "v1": -21.832, "v2": 36.326, "v3": -38.715, "v4": 26.009, "amplitude": 39.200, "phase_angle": 22.078, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.699, "filter_rmsd": 0.105, "frame": { "rmsd": 0.014, "origin": [ 248.275, 230.020, 246.253 ], "x_axis": [ 0.154, -0.600, 0.785 ], "y_axis": [ 0.984, 0.020, -0.178 ], "z_axis": [ 0.091, 0.800, 0.594 ], "quaternion": [ 0.665, -0.368, -0.261, -0.596 ] } }, { "index": 1516, "index_chain": 1516, "chain_name": "a", "nt_resnum": 1517, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1517", "linked_nts": [ "///a/1516", "///a/1518" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -69.394, "beta": 174.107, "gamma": 61.693, "delta": 78.424, "epsilon": -132.418, "zeta": -79.844, "epsilon_zeta": -52.574, "bb_type": "BI", "chi": -164.890, "glyco_bond": "anti", "C5prime_xyz": [ -1.721, 8.844, 0.732 ], "P_xyz": [ 0.739, 9.635, 1.008 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.032, "theta": -142.329, "eta_prime": -175.644, "theta_prime": -140.007, "eta_base": -141.378, "theta_base": -107.210, "v0": -4.483, "v1": -19.617, "v2": 34.800, "v3": -38.427, "v4": 27.068, "amplitude": 38.455, "phase_angle": 25.183, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.856, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 248.262, 232.372, 250.532 ], "x_axis": [ 0.539, -0.798, 0.269 ], "y_axis": [ 0.719, 0.269, -0.641 ], "z_axis": [ 0.439, 0.539, 0.719 ], "quaternion": [ 0.795, -0.371, 0.054, -0.477 ] } }, { "index": 1517, "index_chain": 1517, "chain_name": "a", "nt_resnum": 1518, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1518", "linked_nts": [ "///a/1517", "///a/1519" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -64.022, "beta": 169.253, "gamma": 48.900, "delta": 79.438, "epsilon": -145.988, "zeta": -72.858, "epsilon_zeta": -73.130, "bb_type": "BI", "chi": -155.777, "glyco_bond": "anti", "C5prime_xyz": [ -1.484, 8.845, 0.269 ], "P_xyz": [ 1.046, 9.466, 0.381 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.396, "theta": -145.782, "eta_prime": 173.383, "theta_prime": -145.408, "eta_base": -141.315, "theta_base": -126.409, "v0": -0.608, "v1": -22.852, "v2": 36.300, "v3": -37.575, "v4": 24.078, "amplitude": 38.492, "phase_angle": 19.430, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.805, "filter_rmsd": 0.068, "frame": { "rmsd": 0.015, "origin": [ 250.142, 232.718, 253.924 ], "x_axis": [ 0.690, -0.598, -0.408 ], "y_axis": [ 0.289, 0.744, -0.602 ], "z_axis": [ 0.664, 0.298, 0.686 ], "quaternion": [ 0.883, -0.255, 0.304, -0.251 ] } }, { "index": 1518, "index_chain": 1518, "chain_name": "a", "nt_resnum": 1519, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1519", "linked_nts": [ "///a/1518", "///a/1520" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -70.920, "beta": 165.616, "gamma": 63.963, "delta": 77.735, "epsilon": -151.961, "zeta": -66.194, "epsilon_zeta": -85.767, "bb_type": "BI", "chi": -152.541, "glyco_bond": "anti", "C5prime_xyz": [ -1.941, 8.848, 0.004 ], "P_xyz": [ 0.456, 9.698, -0.568 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.862, "theta": -144.351, "eta_prime": 178.186, "theta_prime": -146.169, "eta_base": -148.891, "theta_base": -118.961, "v0": -1.899, "v1": -22.927, "v2": 37.631, "v3": -39.588, "v4": 26.187, "amplitude": 40.342, "phase_angle": 21.124, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.772, "filter_rmsd": 0.023, "frame": { "rmsd": 0.023, "origin": [ 252.126, 232.031, 256.309 ], "x_axis": [ 0.659, -0.263, -0.704 ], "y_axis": [ 0.137, 0.963, -0.231 ], "z_axis": [ 0.739, 0.056, 0.671 ], "quaternion": [ 0.907, -0.079, 0.398, -0.110 ] } }, { "index": 1519, "index_chain": 1519, "chain_name": "a", "nt_resnum": 1520, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1520", "linked_nts": [ "///a/1519", "///a/1521" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -83.386, "beta": 170.613, "gamma": 78.028, "delta": 78.704, "epsilon": -149.249, "zeta": -70.306, "epsilon_zeta": -78.942, "bb_type": "BI", "chi": -168.321, "glyco_bond": "anti", "C5prime_xyz": [ -1.876, 8.865, 0.881 ], "P_xyz": [ 0.560, 9.794, 0.788 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.454, "theta": -147.114, "eta_prime": -175.200, "theta_prime": -146.549, "eta_base": -132.922, "theta_base": -108.830, "v0": -5.947, "v1": -18.493, "v2": 34.338, "v3": -38.700, "v4": 28.157, "amplitude": 38.607, "phase_angle": 27.199, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.164, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 256.147, 230.725, 257.546 ], "x_axis": [ 0.352, 0.284, -0.892 ], "y_axis": [ -0.267, 0.944, 0.195 ], "z_axis": [ 0.897, 0.169, 0.408 ], "quaternion": [ 0.822, 0.008, 0.544, 0.168 ] } }, { "index": 1520, "index_chain": 1520, "chain_name": "a", "nt_resnum": 1521, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1521", "linked_nts": [ "///a/1520", "///a/1522" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -76.483, "beta": 165.991, "gamma": 73.411, "delta": 78.098, "epsilon": -125.773, "zeta": -99.283, "epsilon_zeta": -26.490, "bb_type": "--", "chi": -153.546, "glyco_bond": "anti", "C5prime_xyz": [ -1.575, 8.841, 0.112 ], "P_xyz": [ 0.859, 9.365, -0.632 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.212, "theta": -156.564, "eta_prime": -171.588, "theta_prime": -147.385, "eta_base": -121.066, "theta_base": -151.338, "v0": -1.312, "v1": -22.913, "v2": 37.188, "v3": -38.912, "v4": 25.391, "amplitude": 39.692, "phase_angle": 20.460, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.371, "filter_rmsd": 0.068, "frame": { "rmsd": 0.017, "origin": [ 259.959, 230.954, 257.344 ], "x_axis": [ 0.310, 0.821, -0.479 ], "y_axis": [ -0.286, 0.561, 0.777 ], "z_axis": [ 0.907, -0.103, 0.409 ], "quaternion": [ 0.755, 0.291, 0.459, 0.367 ] } }, { "index": 1521, "index_chain": 1521, "chain_name": "a", "nt_resnum": 1522, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1522", "linked_nts": [ "///a/1521", "///a/1523" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,canonical,helix-end,stem-end", "alpha": -62.451, "beta": 151.562, "gamma": 80.537, "delta": 146.592, "epsilon": -101.925, "zeta": 132.409, "epsilon_zeta": 125.666, "bb_type": "BII", "chi": -111.056, "glyco_bond": "anti", "C5prime_xyz": [ -2.507, 8.283, -1.644 ], "P_xyz": [ -0.096, 8.637, -2.553 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -158.402, "theta": 169.119, "eta_prime": -137.491, "theta_prime": 120.669, "eta_base": -146.547, "theta_base": 66.239, "v0": -25.645, "v1": 38.636, "v2": -36.020, "v3": 22.200, "v4": 1.973, "amplitude": 38.760, "phase_angle": 158.328, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.111, "filter_rmsd": 0.099, "frame": { "rmsd": 0.019, "origin": [ 262.615, 230.097, 258.192 ], "x_axis": [ -0.086, 0.919, -0.385 ], "y_axis": [ 0.058, 0.390, 0.919 ], "z_axis": [ 0.995, 0.057, -0.087 ], "quaternion": [ 0.552, 0.391, 0.625, 0.390 ] } }, { "index": 1522, "index_chain": 1522, "chain_name": "a", "nt_resnum": 1523, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1523", "linked_nts": [ "///a/1522", "///a/1524" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,canonical", "alpha": 108.373, "beta": -115.006, "gamma": 49.978, "delta": 141.428, "epsilon": -94.022, "zeta": -68.473, "epsilon_zeta": -25.549, "bb_type": "--", "chi": 72.316, "glyco_bond": "syn", "C5prime_xyz": [ -5.339, 5.339, 1.817 ], "P_xyz": [ -6.964, 3.712, 0.585 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 89.311, "theta": -16.828, "eta_prime": 82.819, "theta_prime": -68.447, "eta_base": 53.237, "theta_base": -95.113, "v0": -30.200, "v1": 41.096, "v2": -35.466, "v3": 19.082, "v4": 6.661, "amplitude": 40.296, "phase_angle": 151.659, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.023, "frame": { "rmsd": 0.023, "origin": [ 256.945, 226.220, 267.365 ], "x_axis": [ -0.783, -0.570, -0.249 ], "y_axis": [ 0.601, -0.590, -0.539 ], "z_axis": [ 0.161, -0.572, 0.804 ], "quaternion": [ -0.329, -0.025, -0.312, 0.891 ] } }, { "index": 1523, "index_chain": 1523, "chain_name": "a", "nt_resnum": 1524, "nt_name": "G", "nt_code": "G", "nt_id": "///a/1524", "linked_nts": [ "///a/1523", "///a/1525" ], "nt_type": "RNA", "dbn": ".", "summary": "", "alpha": -110.459, "beta": -119.614, "gamma": -27.110, "delta": 151.250, "epsilon": -45.353, "zeta": 94.767, "epsilon_zeta": 219.880, "bb_type": "--", "chi": -58.548, "glyco_bond": "--", "C5prime_xyz": [ -3.945, 6.625, -2.813 ], "P_xyz": [ -5.049, 8.713, -3.978 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 103.454, "theta": 136.194, "eta_prime": 158.083, "theta_prime": 154.817, "eta_base": 148.118, "theta_base": 179.481, "v0": -26.818, "v1": 42.024, "v2": -39.928, "v3": 25.541, "v4": 0.558, "amplitude": 42.395, "phase_angle": 160.358, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 267.333, 231.747, 255.101 ], "x_axis": [ -0.524, 0.850, 0.056 ], "y_axis": [ -0.038, -0.089, 0.995 ], "z_axis": [ 0.851, 0.519, 0.079 ], "quaternion": [ 0.341, 0.348, 0.582, 0.651 ] } }, { "index": 1524, "index_chain": 1524, "chain_name": "a", "nt_resnum": 1525, "nt_name": "A", "nt_code": "A", "nt_id": "///a/1525", "linked_nts": [ "///a/1524", "///a/1526" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": 175.378, "beta": -129.126, "gamma": 75.090, "delta": 147.460, "epsilon": -169.676, "zeta": -116.888, "epsilon_zeta": -52.788, "bb_type": "BI", "chi": -91.297, "glyco_bond": "anti", "C5prime_xyz": [ -2.994, 7.840, -2.280 ], "P_xyz": [ -0.707, 9.129, -2.248 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.412, "theta": -136.568, "eta_prime": 164.335, "theta_prime": -162.195, "eta_base": -163.773, "theta_base": -114.713, "v0": -27.018, "v1": 42.205, "v2": -40.054, "v3": 25.455, "v4": 0.682, "amplitude": 42.579, "phase_angle": 160.172, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.013, "origin": [ 271.310, 232.658, 254.856 ], "x_axis": [ -0.624, 0.650, 0.435 ], "y_axis": [ 0.112, -0.477, 0.872 ], "z_axis": [ 0.774, 0.592, 0.224 ], "quaternion": [ 0.176, 0.396, 0.480, 0.762 ] } }, { "index": 1525, "index_chain": 1525, "chain_name": "a", "nt_resnum": 1526, "nt_name": "U", "nt_code": "U", "nt_id": "///a/1526", "linked_nts": [ "///a/1525", "///a/1527" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -72.382, "beta": 173.190, "gamma": 37.839, "delta": 76.196, "epsilon": -139.270, "zeta": -74.068, "epsilon_zeta": -65.203, "bb_type": "BI", "chi": -145.708, "glyco_bond": "anti", "C5prime_xyz": [ -1.857, 8.842, -0.387 ], "P_xyz": [ 0.495, 9.960, -0.414 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.326, "theta": -147.089, "eta_prime": 155.328, "theta_prime": -141.230, "eta_base": -144.572, "theta_base": -102.870, "v0": -3.085, "v1": -21.062, "v2": 35.795, "v3": -38.658, "v4": 26.298, "amplitude": 38.914, "phase_angle": 23.095, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.105, "frame": { "rmsd": 0.007, "origin": [ 273.424, 235.971, 256.523 ], "x_axis": [ -0.574, 0.001, 0.819 ], "y_axis": [ 0.428, -0.852, 0.302 ], "z_axis": [ 0.697, 0.524, 0.489 ], "quaternion": [ -0.125, 0.444, 0.242, 0.854 ] } }, { "index": 1526, "index_chain": 1526, "chain_name": "a", "nt_resnum": 1527, "nt_name": "C", "nt_code": "C", "nt_id": "///a/1527", "linked_nts": [ "///a/1526", null ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -65.070, "beta": 167.361, "gamma": 60.251, "delta": 80.299, "epsilon": null, "zeta": null, "epsilon_zeta": null, "bb_type": "--", "chi": -144.339, "glyco_bond": "anti", "C5prime_xyz": [ -1.696, 8.851, -0.447 ], "P_xyz": [ 0.771, 9.430, -1.069 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": null, "theta": null, "eta_prime": null, "theta_prime": null, "eta_base": null, "theta_base": null, "v0": -2.482, "v1": -20.127, "v2": 33.662, "v3": -36.117, "v4": 24.332, "amplitude": 36.422, "phase_angle": 22.448, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.842, "filter_rmsd": 0.066, "frame": { "rmsd": 0.005, "origin": [ 273.971, 237.387, 260.036 ], "x_axis": [ -0.420, -0.662, 0.622 ], "y_axis": [ 0.814, -0.577, -0.064 ], "z_axis": [ 0.401, 0.479, 0.781 ], "quaternion": [ -0.443, 0.307, 0.125, 0.833 ] } }, { "index": 1527, "index_chain": 1, "chain_name": "A", "nt_resnum": 2, "nt_name": "G", "nt_code": "G", "nt_id": "///A/2", "linked_nts": [ null, "///A/3" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": null, "beta": null, "gamma": 15.366, "delta": 80.179, "epsilon": -108.854, "zeta": -115.389, "epsilon_zeta": 6.535, "bb_type": "--", "chi": -170.627, "glyco_bond": "anti", "C5prime_xyz": [ -1.660, 8.738, 1.138 ], "P_xyz": [ null, null, null ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": null, "theta": null, "eta_prime": null, "theta_prime": null, "eta_base": null, "theta_base": null, "v0": -1.729, "v1": -20.613, "v2": 33.794, "v3": -35.736, "v4": 23.662, "amplitude": 36.267, "phase_angle": 21.283, "puckering": "C3'-endo", "sugar_class": "--", "bin": "inc", "cluster": "__", "suiteness": 0.000, "filter_rmsd": 0.006, "frame": { "rmsd": 0.006, "origin": [ 123.526, 165.913, 172.428 ], "x_axis": [ 0.032, 0.449, -0.893 ], "y_axis": [ -0.323, 0.850, 0.415 ], "z_axis": [ 0.946, 0.275, 0.172 ], "quaternion": [ 0.717, 0.049, 0.641, 0.269 ] } }, { "index": 1528, "index_chain": 2, "chain_name": "A", "nt_resnum": 3, "nt_name": "U", "nt_code": "U", "nt_id": "///A/3", "linked_nts": [ "///A/2", "///A/4" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -86.519, "beta": 143.713, "gamma": 73.419, "delta": 89.023, "epsilon": -71.432, "zeta": -149.915, "epsilon_zeta": 78.483, "bb_type": "--", "chi": -155.699, "glyco_bond": "anti", "C5prime_xyz": [ -1.456, 8.799, 0.246 ], "P_xyz": [ 1.015, 8.951, -0.599 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -176.480, "theta": -163.418, "eta_prime": 179.902, "theta_prime": -151.173, "eta_base": 169.910, "theta_base": -121.854, "v0": -1.743, "v1": -18.031, "v2": 29.519, "v3": -31.302, "v4": 20.928, "amplitude": 31.745, "phase_angle": 21.584, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.170, "filter_rmsd": 0.109, "frame": { "rmsd": 0.011, "origin": [ 126.955, 164.423, 174.882 ], "x_axis": [ -0.328, 0.505, -0.798 ], "y_axis": [ -0.101, 0.821, 0.562 ], "z_axis": [ 0.939, 0.265, -0.218 ], "quaternion": [ 0.565, 0.131, 0.769, 0.269 ] } }, { "index": 1529, "index_chain": 3, "chain_name": "A", "nt_resnum": 4, "nt_name": "C", "nt_code": "C", "nt_id": "///A/4", "linked_nts": [ "///A/3", "///A/5" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -65.000, "beta": 114.507, "gamma": 74.170, "delta": 83.126, "epsilon": -149.910, "zeta": -63.569, "epsilon_zeta": -86.341, "bb_type": "BI", "chi": -170.133, "glyco_bond": "anti", "C5prime_xyz": [ -1.104, 8.637, 1.139 ], "P_xyz": [ 1.215, 8.344, -0.096 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.237, "theta": -124.525, "eta_prime": -171.091, "theta_prime": -138.538, "eta_base": -141.044, "theta_base": -110.930, "v0": 3.077, "v1": -24.501, "v2": 35.412, "v3": -34.426, "v4": 19.848, "amplitude": 36.458, "phase_angle": 13.764, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.077, "frame": { "rmsd": 0.018, "origin": [ 134.452, 168.821, 175.105 ], "x_axis": [ -0.535, 0.745, -0.400 ], "y_axis": [ -0.430, 0.167, 0.887 ], "z_axis": [ 0.728, 0.646, 0.231 ], "quaternion": [ 0.465, 0.130, 0.606, 0.632 ] } }, { "index": 1530, "index_chain": 4, "chain_name": "A", "nt_resnum": 5, "nt_name": "A", "nt_code": "A", "nt_id": "///A/5", "linked_nts": [ "///A/4", "///A/6" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -76.749, "beta": 174.264, "gamma": 62.215, "delta": 79.143, "epsilon": -143.878, "zeta": -68.590, "epsilon_zeta": -75.289, "bb_type": "BI", "chi": -158.560, "glyco_bond": "anti", "C5prime_xyz": [ -1.206, 8.693, 0.422 ], "P_xyz": [ 1.397, 8.977, 0.207 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.940, "theta": -138.630, "eta_prime": -177.070, "theta_prime": -139.605, "eta_base": -121.006, "theta_base": -121.642, "v0": 4.053, "v1": -27.165, "v2": 38.779, "v3": -37.371, "v4": 21.017, "amplitude": 39.771, "phase_angle": 12.825, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.775, "filter_rmsd": 0.042, "frame": { "rmsd": 0.012, "origin": [ 136.255, 171.879, 174.528 ], "x_axis": [ -0.595, 0.747, 0.297 ], "y_axis": [ 0.114, -0.287, 0.951 ], "z_axis": [ 0.796, 0.600, 0.085 ], "quaternion": [ 0.226, 0.389, 0.553, 0.701 ] } }, { "index": 1531, "index_chain": 5, "chain_name": "A", "nt_resnum": 6, "nt_name": "A", "nt_code": "A", "nt_id": "///A/6", "linked_nts": [ "///A/5", "///A/7" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -69.195, "beta": 167.299, "gamma": 62.532, "delta": 73.169, "epsilon": -143.818, "zeta": -79.539, "epsilon_zeta": -64.279, "bb_type": "BI", "chi": -160.972, "glyco_bond": "anti", "C5prime_xyz": [ -1.884, 8.766, 0.524 ], "P_xyz": [ 0.523, 9.678, 0.084 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.830, "theta": -153.153, "eta_prime": 178.574, "theta_prime": -152.026, "eta_base": -145.114, "theta_base": -117.859, "v0": -0.459, "v1": -25.430, "v2": 40.422, "v3": -41.630, "v4": 26.464, "amplitude": 42.782, "phase_angle": 19.118, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.732, "filter_rmsd": 0.040, "frame": { "rmsd": 0.017, "origin": [ 137.677, 175.131, 173.663 ], "x_axis": [ -0.575, 0.470, 0.670 ], "y_axis": [ 0.464, -0.487, 0.740 ], "z_axis": [ 0.674, 0.737, 0.062 ], "quaternion": [ 0.002, 0.461, 0.507, 0.729 ] } }, { "index": 1532, "index_chain": 6, "chain_name": "A", "nt_resnum": 7, "nt_name": "G", "nt_code": "G", "nt_id": "///A/7", "linked_nts": [ "///A/6", "///A/8" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -56.200, "beta": 161.330, "gamma": 60.374, "delta": 75.718, "epsilon": -143.483, "zeta": -69.631, "epsilon_zeta": -73.851, "bb_type": "BI", "chi": -165.118, "glyco_bond": "anti", "C5prime_xyz": [ -1.276, 8.771, 0.784 ], "P_xyz": [ 1.281, 9.219, 0.537 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.119, "theta": -143.043, "eta_prime": -176.887, "theta_prime": -142.296, "eta_base": -129.038, "theta_base": -115.178, "v0": 1.534, "v1": -25.869, "v2": 39.266, "v3": -39.345, "v4": 23.830, "amplitude": 40.950, "phase_angle": 16.489, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.681, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 138.042, 178.893, 174.423 ], "x_axis": [ -0.275, -0.038, 0.961 ], "y_axis": [ 0.787, -0.583, 0.202 ], "z_axis": [ 0.552, 0.812, 0.190 ], "quaternion": [ -0.288, 0.529, 0.354, 0.715 ] } }, { "index": 1533, "index_chain": 7, "chain_name": "A", "nt_resnum": 8, "nt_name": "U", "nt_code": "U", "nt_id": "///A/8", "linked_nts": [ "///A/7", "///A/9" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -70.592, "beta": 166.088, "gamma": 71.071, "delta": 78.337, "epsilon": -143.989, "zeta": -62.101, "epsilon_zeta": -81.889, "bb_type": "BI", "chi": -163.055, "glyco_bond": "anti", "C5prime_xyz": [ -1.542, 8.753, 0.682 ], "P_xyz": [ 0.952, 9.392, 0.320 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.407, "theta": -133.591, "eta_prime": -172.902, "theta_prime": -128.261, "eta_base": -129.154, "theta_base": -107.614, "v0": 0.170, "v1": -24.100, "v2": 37.593, "v3": -38.363, "v4": 24.106, "amplitude": 39.589, "phase_angle": 18.271, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.473, "filter_rmsd": 0.103, "frame": { "rmsd": 0.014, "origin": [ 138.166, 182.049, 176.264 ], "x_axis": [ 0.155, -0.385, 0.910 ], "y_axis": [ 0.881, -0.362, -0.303 ], "z_axis": [ 0.446, 0.849, 0.283 ], "quaternion": [ 0.519, -0.555, -0.223, -0.610 ] } }, { "index": 1534, "index_chain": 8, "chain_name": "A", "nt_resnum": 9, "nt_name": "G", "nt_code": "G", "nt_id": "///A/9", "linked_nts": [ "///A/8", "///A/10" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII", "alpha": -72.025, "beta": -172.721, "gamma": 65.010, "delta": 142.078, "epsilon": -138.048, "zeta": 172.188, "epsilon_zeta": 49.764, "bb_type": "BII", "chi": -113.613, "glyco_bond": "anti", "C5prime_xyz": [ -2.757, 8.413, -1.509 ], "P_xyz": [ -0.493, 9.735, -1.499 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.094, "theta": 162.946, "eta_prime": -149.664, "theta_prime": 150.940, "eta_base": -120.608, "theta_base": 167.029, "v0": -26.723, "v1": 38.134, "v2": -34.194, "v3": 19.701, "v4": 4.244, "amplitude": 37.774, "phase_angle": 154.854, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.738, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 138.298, 183.601, 178.949 ], "x_axis": [ 0.398, -0.782, 0.479 ], "y_axis": [ 0.858, 0.132, -0.497 ], "z_axis": [ 0.325, 0.609, 0.723 ], "quaternion": [ 0.751, -0.368, -0.051, -0.546 ] } }, { "index": 1535, "index_chain": 9, "chain_name": "A", "nt_resnum": 10, "nt_name": "A", "nt_code": "A", "nt_id": "///A/10", "linked_nts": [ "///A/9", "///A/11" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical", "alpha": -40.857, "beta": 165.070, "gamma": 1.723, "delta": 81.611, "epsilon": -159.120, "zeta": -81.698, "epsilon_zeta": -77.422, "bb_type": "BI", "chi": -155.522, "glyco_bond": "anti", "C5prime_xyz": [ -1.467, 8.756, 0.287 ], "P_xyz": [ 0.601, 9.732, 1.527 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.758, "theta": -134.974, "eta_prime": 157.256, "theta_prime": -138.514, "eta_base": 169.762, "theta_base": -69.065, "v0": -0.221, "v1": -21.535, "v2": 33.823, "v3": -34.927, "v4": 22.201, "amplitude": 35.769, "phase_angle": 18.985, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.045, "frame": { "rmsd": 0.012, "origin": [ 134.565, 190.332, 178.805 ], "x_axis": [ 0.403, -0.695, 0.595 ], "y_axis": [ 0.791, -0.063, -0.609 ], "z_axis": [ 0.461, 0.716, 0.524 ], "quaternion": [ 0.683, -0.485, -0.049, -0.544 ] } }, { "index": 1536, "index_chain": 10, "chain_name": "A", "nt_resnum": 11, "nt_name": "A", "nt_code": "A", "nt_id": "///A/11", "linked_nts": [ "///A/10", "///A/12" ], "nt_type": "RNA", "dbn": ".", "summary": "syn", "alpha": 129.413, "beta": -145.892, "gamma": -154.344, "delta": 80.905, "epsilon": -110.353, "zeta": -64.762, "epsilon_zeta": -45.591, "bb_type": "--", "chi": 3.439, "glyco_bond": "syn", "C5prime_xyz": [ -5.501, 4.240, -1.331 ], "P_xyz": [ -7.394, 2.873, -0.163 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -177.251, "theta": -145.398, "eta_prime": -168.521, "theta_prime": -137.463, "eta_base": -86.702, "theta_base": -89.596, "v0": -4.422, "v1": -18.305, "v2": 32.692, "v3": -36.116, "v4": 25.641, "amplitude": 36.204, "phase_angle": 25.445, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.066, "filter_rmsd": 0.045, "frame": { "rmsd": 0.019, "origin": [ 138.991, 190.696, 180.915 ], "x_axis": [ -0.560, -0.329, 0.760 ], "y_axis": [ -0.725, 0.639, -0.257 ], "z_axis": [ -0.401, -0.695, -0.597 ], "quaternion": [ -0.347, -0.315, 0.836, -0.285 ] } }, { "index": 1537, "index_chain": 11, "chain_name": "A", "nt_resnum": 12, "nt_name": "G", "nt_code": "G", "nt_id": "///A/12", "linked_nts": [ "///A/11", "///A/13" ], "nt_type": "RNA", "dbn": ".", "summary": "syn", "alpha": -73.172, "beta": 161.720, "gamma": 63.167, "delta": 78.495, "epsilon": -107.962, "zeta": -81.675, "epsilon_zeta": -26.288, "bb_type": "--", "chi": 41.290, "glyco_bond": "syn", "C5prime_xyz": [ -5.809, 4.449, 0.575 ], "P_xyz": [ -6.212, 2.041, 1.492 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.733, "theta": -116.109, "eta_prime": -177.056, "theta_prime": -93.087, "eta_base": -119.587, "theta_base": -96.393, "v0": -9.979, "v1": -14.497, "v2": 31.707, "v3": -38.401, "v4": 30.561, "amplitude": 37.998, "phase_angle": 33.440, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.273, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 141.463, 193.952, 181.254 ], "x_axis": [ 0.043, -0.896, 0.442 ], "y_axis": [ -0.844, 0.204, 0.495 ], "z_axis": [ -0.534, -0.395, -0.748 ], "quaternion": [ -0.353, -0.630, 0.691, 0.036 ] } }, { "index": 1538, "index_chain": 12, "chain_name": "A", "nt_resnum": 13, "nt_name": "A", "nt_code": "A", "nt_id": "///A/13", "linked_nts": [ "///A/12", "///A/14" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -95.565, "beta": -111.627, "gamma": 82.701, "delta": 144.830, "epsilon": -91.628, "zeta": 112.353, "epsilon_zeta": 156.019, "bb_type": "--", "chi": -105.648, "glyco_bond": "anti", "C5prime_xyz": [ -2.344, 8.196, -1.965 ], "P_xyz": [ -0.022, 8.970, -0.995 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -142.156, "theta": 154.199, "eta_prime": -129.968, "theta_prime": 137.355, "eta_base": -145.708, "theta_base": 152.546, "v0": -24.344, "v1": 37.662, "v2": -35.873, "v3": 22.688, "v4": 0.807, "amplitude": 38.169, "phase_angle": 160.028, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.018, "origin": [ 147.668, 200.781, 181.486 ], "x_axis": [ -0.229, -0.506, -0.831 ], "y_axis": [ -0.969, 0.200, 0.145 ], "z_axis": [ 0.093, 0.839, -0.537 ], "quaternion": [ 0.330, -0.526, 0.701, 0.351 ] } }, { "index": 1539, "index_chain": 13, "chain_name": "A", "nt_resnum": 14, "nt_name": "A", "nt_code": "A", "nt_id": "///A/14", "linked_nts": [ "///A/13", "///A/15" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix-end", "alpha": 167.061, "beta": -144.415, "gamma": 86.539, "delta": 84.651, "epsilon": -103.176, "zeta": -84.167, "epsilon_zeta": -19.010, "bb_type": "--", "chi": -166.981, "glyco_bond": "anti", "C5prime_xyz": [ -1.568, 8.703, 0.937 ], "P_xyz": [ 0.977, 8.821, 1.570 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.820, "theta": -79.804, "eta_prime": 147.259, "theta_prime": -86.233, "eta_base": 157.811, "theta_base": -51.704, "v0": -2.204, "v1": -19.360, "v2": 32.201, "v3": -34.318, "v4": 23.133, "amplitude": 34.761, "phase_angle": 22.126, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.017, "origin": [ 149.819, 203.038, 187.484 ], "x_axis": [ -0.169, -0.222, -0.960 ], "y_axis": [ -0.975, 0.177, 0.131 ], "z_axis": [ 0.141, 0.959, -0.247 ], "quaternion": [ 0.436, -0.474, 0.631, 0.432 ] } }, { "index": 1540, "index_chain": 14, "chain_name": "A", "nt_resnum": 15, "nt_name": "G", "nt_code": "G", "nt_id": "///A/15", "linked_nts": [ "///A/14", "///A/16" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 101.808, "beta": -125.366, "gamma": -149.462, "delta": 77.663, "epsilon": -157.419, "zeta": -93.423, "epsilon_zeta": -63.995, "bb_type": "BI", "chi": -170.328, "glyco_bond": "anti", "C5prime_xyz": [ -1.317, 8.577, 1.100 ], "P_xyz": [ -0.794, 10.480, -0.604 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.288, "theta": -172.295, "eta_prime": -171.888, "theta_prime": -165.510, "eta_base": -105.860, "theta_base": -124.787, "v0": 4.890, "v1": -28.405, "v2": 39.982, "v3": -38.173, "v4": 21.007, "amplitude": 40.857, "phase_angle": 11.879, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 147.536, 205.179, 182.078 ], "x_axis": [ -0.872, -0.086, -0.481 ], "y_axis": [ -0.468, 0.430, 0.772 ], "z_axis": [ 0.141, 0.899, -0.416 ], "quaternion": [ 0.189, -0.168, 0.824, 0.507 ] } }, { "index": 1541, "index_chain": 15, "chain_name": "A", "nt_resnum": 16, "nt_name": "C", "nt_code": "C", "nt_id": "///A/16", "linked_nts": [ "///A/15", "///A/17" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 158.897, "beta": -129.787, "gamma": 165.784, "delta": 78.809, "epsilon": -128.594, "zeta": -82.904, "epsilon_zeta": -45.691, "bb_type": "BI", "chi": -176.087, "glyco_bond": "anti", "C5prime_xyz": [ -1.110, 8.474, 1.493 ], "P_xyz": [ 0.906, 9.266, 0.047 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.198, "theta": -149.095, "eta_prime": -171.908, "theta_prime": -151.282, "eta_base": -115.159, "theta_base": -134.887, "v0": 4.504, "v1": -27.389, "v2": 38.951, "v3": -37.189, "v4": 20.586, "amplitude": 39.849, "phase_angle": 12.183, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.259, "filter_rmsd": 0.073, "frame": { "rmsd": 0.017, "origin": [ 146.461, 207.208, 178.747 ], "x_axis": [ -0.942, 0.333, 0.049 ], "y_axis": [ 0.226, 0.516, 0.826 ], "z_axis": [ 0.250, 0.789, -0.561 ], "quaternion": [ 0.058, 0.161, 0.869, 0.465 ] } }, { "index": 1542, "index_chain": 16, "chain_name": "A", "nt_resnum": 17, "nt_name": "G", "nt_code": "G", "nt_id": "///A/17", "linked_nts": [ "///A/16", "///A/18" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -61.517, "beta": 179.709, "gamma": 52.810, "delta": 83.005, "epsilon": -145.174, "zeta": -73.300, "epsilon_zeta": -71.874, "bb_type": "BI", "chi": -159.091, "glyco_bond": "anti", "C5prime_xyz": [ -1.427, 8.724, 0.457 ], "P_xyz": [ 1.106, 9.206, 0.849 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.272, "theta": -141.978, "eta_prime": -177.069, "theta_prime": -140.550, "eta_base": -149.475, "theta_base": -113.547, "v0": 0.758, "v1": -22.520, "v2": 34.380, "v3": -34.891, "v4": 21.618, "amplitude": 36.035, "phase_angle": 17.435, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.721, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 146.267, 209.512, 175.082 ], "x_axis": [ -0.726, 0.331, 0.602 ], "y_axis": [ 0.686, 0.298, 0.663 ], "z_axis": [ 0.040, 0.895, -0.444 ], "quaternion": [ -0.179, 0.324, 0.786, 0.496 ] } }, { "index": 1543, "index_chain": 17, "chain_name": "A", "nt_resnum": 18, "nt_name": "C", "nt_code": "C", "nt_id": "///A/18", "linked_nts": [ "///A/17", "///A/19" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -69.135, "beta": 170.732, "gamma": 55.072, "delta": 78.524, "epsilon": -151.608, "zeta": -73.773, "epsilon_zeta": -77.835, "bb_type": "BI", "chi": -155.154, "glyco_bond": "anti", "C5prime_xyz": [ -1.552, 8.829, 0.245 ], "P_xyz": [ 0.987, 9.422, 0.129 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.259, "theta": -149.733, "eta_prime": 176.352, "theta_prime": -148.547, "eta_base": -141.883, "theta_base": -121.294, "v0": 1.030, "v1": -24.527, "v2": 37.389, "v3": -37.691, "v4": 23.154, "amplitude": 39.108, "phase_angle": 17.049, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.965, "filter_rmsd": 0.067, "frame": { "rmsd": 0.017, "origin": [ 144.839, 212.561, 173.673 ], "x_axis": [ -0.234, 0.278, 0.932 ], "y_axis": [ 0.966, 0.179, 0.189 ], "z_axis": [ -0.114, 0.944, -0.310 ], "quaternion": [ -0.398, 0.474, 0.656, 0.432 ] } }, { "index": 1544, "index_chain": 18, "chain_name": "A", "nt_resnum": 19, "nt_name": "A", "nt_code": "A", "nt_id": "///A/19", "linked_nts": [ "///A/18", "///A/20" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -70.263, "beta": 175.741, "gamma": 58.364, "delta": 80.804, "epsilon": -150.014, "zeta": -70.618, "epsilon_zeta": -79.396, "bb_type": "BI", "chi": -150.331, "glyco_bond": "anti", "C5prime_xyz": [ -1.378, 8.706, -0.067 ], "P_xyz": [ 1.186, 9.101, -0.357 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.684, "theta": -144.314, "eta_prime": 179.297, "theta_prime": -143.902, "eta_base": -141.606, "theta_base": -120.056, "v0": 2.340, "v1": -25.540, "v2": 37.694, "v3": -37.303, "v4": 22.016, "amplitude": 39.053, "phase_angle": 15.163, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.927, "filter_rmsd": 0.042, "frame": { "rmsd": 0.015, "origin": [ 143.345, 215.690, 173.618 ], "x_axis": [ 0.342, 0.190, 0.920 ], "y_axis": [ 0.909, 0.183, -0.376 ], "z_axis": [ -0.240, 0.964, -0.110 ], "quaternion": [ 0.595, -0.563, -0.488, -0.302 ] } }, { "index": 1545, "index_chain": 19, "chain_name": "A", "nt_resnum": 20, "nt_name": "U", "nt_code": "U", "nt_id": "///A/20", "linked_nts": [ "///A/19", "///A/21" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -73.935, "beta": 164.721, "gamma": 73.620, "delta": 79.241, "epsilon": -149.377, "zeta": -69.624, "epsilon_zeta": -79.752, "bb_type": "BI", "chi": -162.866, "glyco_bond": "anti", "C5prime_xyz": [ -1.514, 8.740, 0.674 ], "P_xyz": [ 0.981, 9.314, 0.156 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.227, "theta": -143.519, "eta_prime": -172.924, "theta_prime": -146.342, "eta_base": -133.125, "theta_base": -122.777, "v0": 1.386, "v1": -24.970, "v2": 37.823, "v3": -37.834, "v4": 23.020, "amplitude": 39.449, "phase_angle": 16.507, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.373, "filter_rmsd": 0.104, "frame": { "rmsd": 0.013, "origin": [ 142.220, 219.634, 175.009 ], "x_axis": [ 0.788, 0.109, 0.605 ], "y_axis": [ 0.600, 0.083, -0.796 ], "z_axis": [ -0.137, 0.991, 0.001 ], "quaternion": [ 0.684, -0.653, -0.271, -0.179 ] } }, { "index": 1546, "index_chain": 20, "chain_name": "A", "nt_resnum": 21, "nt_name": "A", "nt_code": "A", "nt_id": "///A/21", "linked_nts": [ "///A/20", "///A/22" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -66.751, "beta": 175.647, "gamma": 54.722, "delta": 77.892, "epsilon": -152.235, "zeta": -95.841, "epsilon_zeta": -56.394, "bb_type": "BI", "chi": -149.741, "glyco_bond": "anti", "C5prime_xyz": [ -1.585, 8.799, -0.137 ], "P_xyz": [ 0.934, 9.495, -0.367 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.920, "theta": -133.823, "eta_prime": -179.795, "theta_prime": -140.097, "eta_base": -140.611, "theta_base": -116.946, "v0": -1.224, "v1": -22.188, "v2": 35.915, "v3": -37.630, "v4": 24.493, "amplitude": 38.324, "phase_angle": 20.423, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.960, "filter_rmsd": 0.039, "frame": { "rmsd": 0.013, "origin": [ 141.920, 222.264, 176.887 ], "x_axis": [ 0.991, 0.093, 0.093 ], "y_axis": [ 0.067, 0.247, -0.967 ], "z_axis": [ -0.112, 0.964, 0.239 ], "quaternion": [ 0.787, -0.613, -0.065, 0.008 ] } }, { "index": 1547, "index_chain": 21, "chain_name": "A", "nt_resnum": 22, "nt_name": "C", "nt_code": "C", "nt_id": "///A/22", "linked_nts": [ "///A/21", "///A/23" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 141.219, "beta": -136.385, "gamma": -178.234, "delta": 79.480, "epsilon": -118.436, "zeta": -40.098, "epsilon_zeta": -78.339, "bb_type": "--", "chi": -163.526, "glyco_bond": "anti", "C5prime_xyz": [ -1.304, 8.770, 0.756 ], "P_xyz": [ 0.096, 9.963, -1.103 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.721, "theta": -133.484, "eta_prime": -179.316, "theta_prime": -147.219, "eta_base": -141.096, "theta_base": -130.502, "v0": 0.663, "v1": -23.373, "v2": 36.035, "v3": -36.564, "v4": 22.618, "amplitude": 37.801, "phase_angle": 17.583, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.344, "filter_rmsd": 0.067, "frame": { "rmsd": 0.011, "origin": [ 143.284, 224.655, 178.873 ], "x_axis": [ 0.928, 0.051, -0.370 ], "y_axis": [ -0.355, 0.428, -0.831 ], "z_axis": [ 0.116, 0.902, 0.415 ], "quaternion": [ 0.832, -0.521, 0.146, 0.122 ] } }, { "index": 1548, "index_chain": 22, "chain_name": "A", "nt_resnum": 23, "nt_name": "G", "nt_code": "G", "nt_id": "///A/23", "linked_nts": [ "///A/22", "///A/24" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -125.801, "beta": 103.640, "gamma": 153.402, "delta": 80.231, "epsilon": -119.736, "zeta": -76.171, "epsilon_zeta": -43.565, "bb_type": "--", "chi": 173.598, "glyco_bond": "anti", "C5prime_xyz": [ -1.186, 8.216, 1.993 ], "P_xyz": [ -0.619, 10.433, 0.717 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.163, "theta": -174.757, "eta_prime": 176.726, "theta_prime": -163.302, "eta_base": -147.923, "theta_base": -130.730, "v0": 4.649, "v1": -26.643, "v2": 37.393, "v3": -35.684, "v4": 19.568, "amplitude": 38.195, "phase_angle": 11.761, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.010, "filter_rmsd": 0.023, "frame": { "rmsd": 0.023, "origin": [ 146.265, 227.409, 180.990 ], "x_axis": [ 0.634, -0.072, -0.770 ], "y_axis": [ -0.707, 0.350, -0.615 ], "z_axis": [ 0.314, 0.934, 0.171 ], "quaternion": [ 0.734, -0.528, 0.369, 0.216 ] } }, { "index": 1549, "index_chain": 23, "chain_name": "A", "nt_resnum": 24, "nt_name": "G", "nt_code": "G", "nt_id": "///A/24", "linked_nts": [ "///A/23", "///A/25" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -72.310, "beta": 167.414, "gamma": 67.014, "delta": 77.436, "epsilon": -150.027, "zeta": -64.249, "epsilon_zeta": -85.778, "bb_type": "BI", "chi": -173.755, "glyco_bond": "anti", "C5prime_xyz": [ -1.866, 8.774, 1.158 ], "P_xyz": [ 0.601, 9.578, 1.388 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.993, "theta": -140.955, "eta_prime": -179.361, "theta_prime": -138.746, "eta_base": -135.281, "theta_base": -92.992, "v0": -4.970, "v1": -19.745, "v2": 35.488, "v3": -39.326, "v4": 27.962, "amplitude": 39.377, "phase_angle": 25.678, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.423, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 149.742, 229.603, 181.490 ], "x_axis": [ 0.039, -0.024, -0.999 ], "y_axis": [ -0.934, 0.356, -0.045 ], "z_axis": [ 0.356, 0.934, -0.008 ], "quaternion": [ 0.589, -0.416, 0.576, 0.387 ] } }, { "index": 1550, "index_chain": 24, "chain_name": "A", "nt_resnum": 25, "nt_name": "U", "nt_code": "U", "nt_id": "///A/25", "linked_nts": [ "///A/24", "///A/26" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -80.583, "beta": 174.179, "gamma": 74.126, "delta": 85.582, "epsilon": -142.846, "zeta": -49.902, "epsilon_zeta": -92.944, "bb_type": "BI", "chi": -161.371, "glyco_bond": "anti", "C5prime_xyz": [ -1.313, 8.734, 0.579 ], "P_xyz": [ 1.274, 9.051, 0.629 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.526, "theta": -115.818, "eta_prime": -166.438, "theta_prime": -117.763, "eta_base": -106.033, "theta_base": -60.364, "v0": -1.536, "v1": -19.244, "v2": 31.504, "v3": -33.192, "v4": 22.048, "amplitude": 33.781, "phase_angle": 21.161, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.311, "filter_rmsd": 0.107, "frame": { "rmsd": 0.017, "origin": [ 151.370, 232.711, 179.158 ], "x_axis": [ -0.677, 0.261, -0.688 ], "y_axis": [ -0.626, 0.288, 0.725 ], "z_axis": [ 0.387, 0.921, -0.032 ], "quaternion": [ 0.381, -0.129, 0.707, 0.582 ] } }, { "index": 1551, "index_chain": 25, "chain_name": "A", "nt_resnum": 26, "nt_name": "G", "nt_code": "G", "nt_id": "///A/26", "linked_nts": [ "///A/25", "///A/27" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -102.629, "beta": 168.238, "gamma": 80.384, "delta": 83.474, "epsilon": -99.430, "zeta": -110.639, "epsilon_zeta": 11.209, "bb_type": "--", "chi": -147.645, "glyco_bond": "anti", "C5prime_xyz": [ -1.262, 8.716, -0.200 ], "P_xyz": [ 1.136, 8.897, -1.212 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.682, "theta": -145.329, "eta_prime": -171.507, "theta_prime": -139.293, "eta_base": -96.106, "theta_base": -103.252, "v0": 3.532, "v1": -25.168, "v2": 36.018, "v3": -34.823, "v4": 19.906, "amplitude": 36.998, "phase_angle": 13.215, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.010, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 149.001, 236.488, 178.140 ], "x_axis": [ -0.893, 0.386, 0.229 ], "y_axis": [ 0.331, 0.222, 0.917 ], "z_axis": [ 0.303, 0.895, -0.327 ], "quaternion": [ 0.024, 0.230, 0.781, 0.580 ] } }, { "index": 1552, "index_chain": 26, "chain_name": "A", "nt_resnum": 27, "nt_name": "G", "nt_code": "G", "nt_id": "///A/27", "linked_nts": [ "///A/26", "///A/28" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -59.019, "beta": 111.706, "gamma": 90.024, "delta": 87.384, "epsilon": 167.469, "zeta": -90.182, "epsilon_zeta": -102.349, "bb_type": "BI", "chi": -137.607, "glyco_bond": "anti", "C5prime_xyz": [ -1.807, 8.675, -0.805 ], "P_xyz": [ -0.196, 8.012, -2.778 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.772, "theta": 178.697, "eta_prime": -160.098, "theta_prime": 145.306, "eta_base": -112.868, "theta_base": 148.007, "v0": -0.585, "v1": -19.985, "v2": 31.409, "v3": -32.628, "v4": 21.075, "amplitude": 33.328, "phase_angle": 19.537, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.043, "filter_rmsd": 0.027, "frame": { "rmsd": 0.027, "origin": [ 148.747, 240.057, 178.821 ], "x_axis": [ -0.676, 0.418, 0.607 ], "y_axis": [ 0.737, 0.388, 0.553 ], "z_axis": [ -0.004, 0.821, -0.570 ], "quaternion": [ -0.188, 0.356, 0.811, 0.424 ] } }, { "index": 1553, "index_chain": 27, "chain_name": "A", "nt_resnum": 28, "nt_name": "A", "nt_code": "A", "nt_id": "///A/28", "linked_nts": [ "///A/27", "///A/29" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -93.346, "beta": 164.457, "gamma": 94.494, "delta": 79.301, "epsilon": -142.137, "zeta": -56.052, "epsilon_zeta": -86.086, "bb_type": "BI", "chi": -176.287, "glyco_bond": "anti", "C5prime_xyz": [ -1.597, 8.536, 1.412 ], "P_xyz": [ 0.850, 9.394, 1.020 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.006, "theta": -126.466, "eta_prime": 174.836, "theta_prime": -129.087, "eta_base": -176.720, "theta_base": -78.386, "v0": 1.468, "v1": -24.637, "v2": 37.157, "v3": -37.274, "v4": 22.576, "amplitude": 38.741, "phase_angle": 16.440, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.015, "origin": [ 152.302, 240.276, 171.908 ], "x_axis": [ -0.786, 0.494, 0.372 ], "y_axis": [ 0.560, 0.313, 0.767 ], "z_axis": [ 0.263, 0.811, -0.523 ], "quaternion": [ -0.034, 0.326, 0.809, 0.487 ] } }, { "index": 1554, "index_chain": 28, "chain_name": "A", "nt_resnum": 29, "nt_name": "U", "nt_code": "U", "nt_id": "///A/29", "linked_nts": [ "///A/28", "///A/30" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -103.069, "beta": -178.479, "gamma": 79.841, "delta": 81.660, "epsilon": -141.537, "zeta": -66.073, "epsilon_zeta": -75.464, "bb_type": "BI", "chi": -163.146, "glyco_bond": "anti", "C5prime_xyz": [ -1.264, 8.672, 0.708 ], "P_xyz": [ 1.321, 8.994, 0.484 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.732, "theta": -131.970, "eta_prime": -178.327, "theta_prime": -132.521, "eta_base": -104.208, "theta_base": -97.197, "v0": 2.696, "v1": -24.982, "v2": 36.600, "v3": -35.908, "v4": 21.026, "amplitude": 37.815, "phase_angle": 14.559, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.010, "filter_rmsd": 0.114, "frame": { "rmsd": 0.022, "origin": [ 150.893, 244.611, 171.804 ], "x_axis": [ 0.054, 0.498, 0.866 ], "y_axis": [ 0.984, -0.173, 0.037 ], "z_axis": [ 0.168, 0.850, -0.499 ], "quaternion": [ -0.309, 0.657, 0.564, 0.393 ] } }, { "index": 1555, "index_chain": 29, "chain_name": "A", "nt_resnum": 30, "nt_name": "G", "nt_code": "G", "nt_id": "///A/30", "linked_nts": [ "///A/29", "///A/31" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix", "alpha": -70.617, "beta": 176.601, "gamma": 57.202, "delta": 81.820, "epsilon": -136.063, "zeta": -77.686, "epsilon_zeta": -58.377, "bb_type": "BI", "chi": -158.285, "glyco_bond": "anti", "C5prime_xyz": [ -1.299, 8.840, 0.396 ], "P_xyz": [ 1.281, 9.266, 0.523 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.374, "theta": -138.927, "eta_prime": -174.731, "theta_prime": -137.415, "eta_base": -122.928, "theta_base": -105.051, "v0": -0.388, "v1": -22.110, "v2": 34.907, "v3": -35.985, "v4": 23.034, "amplitude": 36.951, "phase_angle": 19.145, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.934, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 151.124, 248.729, 172.230 ], "x_axis": [ 0.676, 0.061, 0.735 ], "y_axis": [ 0.695, -0.383, -0.608 ], "z_axis": [ 0.245, 0.922, -0.301 ], "quaternion": [ -0.498, 0.768, 0.246, 0.319 ] } }, { "index": 1556, "index_chain": 30, "chain_name": "A", "nt_resnum": 31, "nt_name": "C", "nt_code": "C", "nt_id": "///A/31", "linked_nts": [ "///A/30", "///A/32" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -63.250, "beta": 158.562, "gamma": 56.548, "delta": 75.690, "epsilon": -149.505, "zeta": -68.733, "epsilon_zeta": -80.772, "bb_type": "BI", "chi": -158.415, "glyco_bond": "anti", "C5prime_xyz": [ -1.589, 8.871, 0.395 ], "P_xyz": [ 0.939, 9.417, -0.012 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.119, "theta": -144.485, "eta_prime": 175.849, "theta_prime": -145.281, "eta_base": -134.005, "theta_base": -123.411, "v0": 1.213, "v1": -25.984, "v2": 39.670, "v3": -39.754, "v4": 24.359, "amplitude": 41.444, "phase_angle": 16.823, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.792, "filter_rmsd": 0.068, "frame": { "rmsd": 0.017, "origin": [ 152.725, 251.947, 172.876 ], "x_axis": [ 0.891, -0.333, 0.309 ], "y_axis": [ 0.245, -0.222, -0.944 ], "z_axis": [ 0.383, 0.916, -0.116 ], "quaternion": [ 0.623, -0.746, 0.029, -0.232 ] } }, { "index": 1557, "index_chain": 31, "chain_name": "A", "nt_resnum": 32, "nt_name": "C", "nt_code": "C", "nt_id": "///A/32", "linked_nts": [ "///A/31", "///A/33" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -70.481, "beta": 167.414, "gamma": 77.972, "delta": 80.407, "epsilon": -147.638, "zeta": -21.357, "epsilon_zeta": -126.280, "bb_type": "--", "chi": -158.789, "glyco_bond": "anti", "C5prime_xyz": [ -1.741, 8.940, 0.359 ], "P_xyz": [ 0.703, 9.765, -0.042 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 179.985, "theta": -118.008, "eta_prime": -165.351, "theta_prime": -130.268, "eta_base": -130.272, "theta_base": -114.795, "v0": -6.406, "v1": -16.506, "v2": 31.705, "v3": -36.336, "v4": 26.957, "amplitude": 36.110, "phase_angle": 28.596, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.199, "filter_rmsd": 0.064, "frame": { "rmsd": 0.012, "origin": [ 154.937, 254.681, 174.521 ], "x_axis": [ 0.856, -0.484, -0.179 ], "y_axis": [ -0.155, 0.090, -0.984 ], "z_axis": [ 0.493, 0.870, 0.002 ], "quaternion": [ 0.698, -0.664, 0.241, -0.118 ] } }, { "index": 1558, "index_chain": 32, "chain_name": "A", "nt_resnum": 33, "nt_name": "U", "nt_code": "U", "nt_id": "///A/33", "linked_nts": [ "///A/32", "///A/34" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -142.983, "beta": 97.335, "gamma": 176.695, "delta": 145.509, "epsilon": -141.858, "zeta": -64.084, "epsilon_zeta": -77.774, "bb_type": "BI", "chi": -150.301, "glyco_bond": "anti", "C5prime_xyz": [ -1.508, 8.585, 0.458 ], "P_xyz": [ -1.051, 10.434, -1.334 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -143.250, "theta": -144.995, "eta_prime": -142.863, "theta_prime": 176.576, "eta_base": -119.284, "theta_base": 155.078, "v0": -18.030, "v1": 31.719, "v2": -32.515, "v3": 22.927, "v4": -3.203, "amplitude": 33.408, "phase_angle": 166.720, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.098, "frame": { "rmsd": 0.023, "origin": [ 158.103, 256.241, 175.709 ], "x_axis": [ 0.567, -0.600, -0.564 ], "y_axis": [ -0.347, 0.448, -0.824 ], "z_axis": [ 0.747, 0.663, 0.046 ], "quaternion": [ 0.718, -0.518, 0.457, -0.088 ] } }, { "index": 1559, "index_chain": 33, "chain_name": "A", "nt_resnum": 34, "nt_name": "U", "nt_code": "U", "nt_id": "///A/34", "linked_nts": [ "///A/33", "///A/35" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack,non-canonical,multiplet", "alpha": 164.141, "beta": 101.854, "gamma": 110.683, "delta": 83.243, "epsilon": 177.758, "zeta": 28.186, "epsilon_zeta": 149.572, "bb_type": "--", "chi": -170.559, "glyco_bond": "anti", "C5prime_xyz": [ -1.415, 8.682, 1.130 ], "P_xyz": [ 0.222, 9.200, -0.847 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 37.682, "theta": -74.419, "eta_prime": 105.651, "theta_prime": -90.733, "eta_base": 109.756, "theta_base": -70.126, "v0": -1.070, "v1": -19.780, "v2": 31.828, "v3": -33.349, "v4": 21.798, "amplitude": 33.959, "phase_angle": 20.403, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.108, "frame": { "rmsd": 0.009, "origin": [ 155.374, 260.686, 181.415 ], "x_axis": [ 0.030, -0.900, -0.434 ], "y_axis": [ -0.089, 0.431, -0.898 ], "z_axis": [ 0.996, 0.066, -0.067 ], "quaternion": [ 0.590, -0.408, 0.606, -0.344 ] } }, { "index": 1560, "index_chain": 34, "chain_name": "A", "nt_resnum": 35, "nt_name": "G", "nt_code": "G", "nt_id": "///A/35", "linked_nts": [ "///A/34", "///A/36" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -133.357, "beta": -152.085, "gamma": 70.645, "delta": 81.926, "epsilon": -163.695, "zeta": -84.949, "epsilon_zeta": -78.746, "bb_type": "BI", "chi": -152.446, "glyco_bond": "anti", "C5prime_xyz": [ -1.175, 8.790, 0.142 ], "P_xyz": [ 1.400, 8.925, 0.581 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.410, "theta": -128.305, "eta_prime": -153.534, "theta_prime": -137.485, "eta_base": -97.790, "theta_base": -131.712, "v0": 2.089, "v1": -24.997, "v2": 37.128, "v3": -36.807, "v4": 21.911, "amplitude": 38.524, "phase_angle": 15.474, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.023, "frame": { "rmsd": 0.023, "origin": [ 162.697, 261.754, 171.803 ], "x_axis": [ -0.488, 0.530, -0.694 ], "y_axis": [ -0.424, 0.551, 0.719 ], "z_axis": [ 0.763, 0.645, -0.044 ], "quaternion": [ 0.505, 0.037, 0.722, 0.472 ] } }, { "index": 1561, "index_chain": 35, "chain_name": "A", "nt_resnum": 36, "nt_name": "G", "nt_code": "G", "nt_id": "///A/36", "linked_nts": [ "///A/35", "///A/37" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 136.318, "beta": -142.900, "gamma": -161.377, "delta": 81.337, "epsilon": -140.642, "zeta": -55.654, "epsilon_zeta": -84.988, "bb_type": "BI", "chi": 179.380, "glyco_bond": "anti", "C5prime_xyz": [ -1.553, 8.484, 1.732 ], "P_xyz": [ -0.128, 10.456, 0.769 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.637, "theta": -155.353, "eta_prime": -167.477, "theta_prime": -148.281, "eta_base": -141.963, "theta_base": -101.992, "v0": 0.464, "v1": -23.148, "v2": 35.738, "v3": -36.376, "v4": 22.677, "amplitude": 37.547, "phase_angle": 17.860, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.275, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 166.425, 262.997, 169.653 ], "x_axis": [ -0.600, 0.661, -0.450 ], "y_axis": [ -0.285, 0.349, 0.893 ], "z_axis": [ 0.747, 0.664, -0.021 ], "quaternion": [ 0.427, 0.134, 0.702, 0.555 ] } }, { "index": 1562, "index_chain": 36, "chain_name": "A", "nt_resnum": 37, "nt_name": "C", "nt_code": "C", "nt_id": "///A/37", "linked_nts": [ "///A/36", "///A/38" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -80.171, "beta": -176.484, "gamma": 58.672, "delta": 78.382, "epsilon": -140.070, "zeta": -82.840, "epsilon_zeta": -57.230, "bb_type": "BI", "chi": -156.676, "glyco_bond": "anti", "C5prime_xyz": [ -1.556, 8.861, 0.299 ], "P_xyz": [ 0.947, 9.530, 0.628 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.595, "theta": -151.453, "eta_prime": -176.502, "theta_prime": -149.225, "eta_base": -115.762, "theta_base": -130.553, "v0": -1.182, "v1": -22.638, "v2": 36.614, "v3": -38.245, "v4": 24.824, "amplitude": 39.031, "phase_angle": 20.268, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.672, "filter_rmsd": 0.057, "frame": { "rmsd": 0.018, "origin": [ 167.777, 266.679, 167.876 ], "x_axis": [ -0.595, 0.715, 0.368 ], "y_axis": [ 0.283, -0.242, 0.928 ], "z_axis": [ 0.752, 0.656, -0.059 ], "quaternion": [ 0.162, 0.420, 0.594, 0.667 ] } }, { "index": 1563, "index_chain": 37, "chain_name": "A", "nt_resnum": 38, "nt_name": "A", "nt_code": "A", "nt_id": "///A/38", "linked_nts": [ "///A/37", "///A/39" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -66.095, "beta": 157.942, "gamma": 65.829, "delta": 78.765, "epsilon": -164.553, "zeta": -87.528, "epsilon_zeta": -77.025, "bb_type": "BI", "chi": -155.458, "glyco_bond": "anti", "C5prime_xyz": [ -1.813, 8.763, 0.224 ], "P_xyz": [ 0.633, 9.428, -0.375 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.794, "theta": -134.076, "eta_prime": 179.293, "theta_prime": -145.725, "eta_base": -149.717, "theta_base": -123.604, "v0": -1.758, "v1": -21.813, "v2": 35.793, "v3": -37.745, "v4": 24.953, "amplitude": 38.381, "phase_angle": 21.161, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.640, "filter_rmsd": 0.040, "frame": { "rmsd": 0.021, "origin": [ 169.676, 269.336, 166.727 ], "x_axis": [ -0.514, 0.473, 0.715 ], "y_axis": [ 0.599, -0.398, 0.695 ], "z_axis": [ 0.614, 0.786, -0.079 ], "quaternion": [ -0.046, 0.491, 0.547, 0.677 ] } }, { "index": 1564, "index_chain": 38, "chain_name": "A", "nt_resnum": 39, "nt_name": "G", "nt_code": "G", "nt_id": "///A/39", "linked_nts": [ "///A/38", "///A/40" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 148.207, "beta": -143.960, "gamma": -179.994, "delta": 78.658, "epsilon": -134.907, "zeta": -80.932, "epsilon_zeta": -53.975, "bb_type": "BI", "chi": -175.498, "glyco_bond": "anti", "C5prime_xyz": [ -1.340, 8.561, 1.421 ], "P_xyz": [ 0.340, 10.073, 0.128 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.493, "theta": -164.892, "eta_prime": -178.067, "theta_prime": -161.524, "eta_base": -135.093, "theta_base": -138.663, "v0": 2.073, "v1": -24.946, "v2": 37.177, "v3": -36.954, "v4": 22.011, "amplitude": 38.599, "phase_angle": 15.600, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.618, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 169.841, 273.324, 166.422 ], "x_axis": [ -0.156, 0.191, 0.969 ], "y_axis": [ 0.826, -0.512, 0.234 ], "z_axis": [ 0.541, 0.837, -0.078 ], "quaternion": [ -0.252, 0.599, 0.425, 0.631 ] } }, { "index": 1565, "index_chain": 39, "chain_name": "A", "nt_resnum": 40, "nt_name": "U", "nt_code": "U", "nt_id": "///A/40", "linked_nts": [ "///A/39", "///A/41" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -56.238, "beta": 169.951, "gamma": 50.700, "delta": 78.709, "epsilon": -136.386, "zeta": -75.256, "epsilon_zeta": -61.130, "bb_type": "BI", "chi": -157.345, "glyco_bond": "anti", "C5prime_xyz": [ -1.649, 8.763, 0.337 ], "P_xyz": [ 0.883, 9.363, 0.391 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.468, "theta": -138.947, "eta_prime": -177.545, "theta_prime": -137.021, "eta_base": -145.482, "theta_base": -99.491, "v0": 0.581, "v1": -24.176, "v2": 37.351, "v3": -37.970, "v4": 23.555, "amplitude": 39.215, "phase_angle": 17.737, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.812, "filter_rmsd": 0.104, "frame": { "rmsd": 0.010, "origin": [ 169.948, 277.065, 166.347 ], "x_axis": [ 0.266, -0.099, 0.959 ], "y_axis": [ 0.853, -0.440, -0.282 ], "z_axis": [ 0.450, 0.893, -0.032 ], "quaternion": [ -0.445, 0.659, 0.286, 0.534 ] } }, { "index": 1566, "index_chain": 40, "chain_name": "A", "nt_resnum": 41, "nt_name": "C", "nt_code": "C", "nt_id": "///A/41", "linked_nts": [ "///A/40", "///A/42" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -61.554, "beta": 161.605, "gamma": 59.940, "delta": 76.754, "epsilon": -153.982, "zeta": -82.543, "epsilon_zeta": -71.439, "bb_type": "BI", "chi": -153.931, "glyco_bond": "anti", "C5prime_xyz": [ -1.600, 8.882, 0.133 ], "P_xyz": [ 0.889, 9.464, -0.406 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.266, "theta": -127.796, "eta_prime": -179.422, "theta_prime": -142.254, "eta_base": -125.251, "theta_base": -128.224, "v0": -0.425, "v1": -23.634, "v2": 37.386, "v3": -38.594, "v4": 24.591, "amplitude": 39.578, "phase_angle": 19.158, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.810, "filter_rmsd": 0.066, "frame": { "rmsd": 0.011, "origin": [ 171.413, 279.482, 168.639 ], "x_axis": [ 0.654, -0.491, 0.576 ], "y_axis": [ 0.618, -0.093, -0.781 ], "z_axis": [ 0.437, 0.866, 0.242 ], "quaternion": [ 0.671, -0.613, -0.052, -0.413 ] } }, { "index": 1567, "index_chain": 41, "chain_name": "A", "nt_resnum": 42, "nt_name": "A", "nt_code": "A", "nt_id": "///A/42", "linked_nts": [ "///A/41", "///A/43" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 138.137, "beta": -157.590, "gamma": -171.925, "delta": 78.584, "epsilon": -125.149, "zeta": -74.260, "epsilon_zeta": -50.889, "bb_type": "--", "chi": -171.971, "glyco_bond": "anti", "C5prime_xyz": [ -1.161, 8.473, 1.200 ], "P_xyz": [ 0.045, 10.383, -0.145 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.939, "theta": -165.049, "eta_prime": 169.820, "theta_prime": -158.864, "eta_base": -155.080, "theta_base": -132.531, "v0": 6.406, "v1": -29.431, "v2": 40.095, "v3": -37.340, "v4": 19.535, "amplitude": 40.674, "phase_angle": 9.675, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.628, "filter_rmsd": 0.044, "frame": { "rmsd": 0.012, "origin": [ 172.265, 281.290, 171.651 ], "x_axis": [ 0.745, -0.650, 0.150 ], "y_axis": [ 0.393, 0.245, -0.886 ], "z_axis": [ 0.539, 0.719, 0.438 ], "quaternion": [ 0.779, -0.515, 0.125, -0.335 ] } }, { "index": 1568, "index_chain": 42, "chain_name": "A", "nt_resnum": 43, "nt_name": "G", "nt_code": "G", "nt_id": "///A/43", "linked_nts": [ "///A/42", "///A/44" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -79.714, "beta": 139.216, "gamma": 105.353, "delta": 79.980, "epsilon": -123.522, "zeta": -108.420, "epsilon_zeta": -15.103, "bb_type": "--", "chi": 174.500, "glyco_bond": "anti", "C5prime_xyz": [ -1.834, 8.466, 1.889 ], "P_xyz": [ 0.377, 9.655, 1.122 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.808, "theta": -129.131, "eta_prime": -161.642, "theta_prime": -121.485, "eta_base": -121.500, "theta_base": -80.624, "v0": -0.952, "v1": -23.057, "v2": 37.011, "v3": -38.372, "v4": 24.781, "amplitude": 39.341, "phase_angle": 19.817, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 174.773, 282.042, 175.178 ], "x_axis": [ 0.818, -0.482, -0.312 ], "y_axis": [ -0.005, 0.538, -0.843 ], "z_axis": [ 0.575, 0.691, 0.438 ], "quaternion": [ 0.836, -0.459, 0.265, -0.143 ] } }, { "index": 1569, "index_chain": 43, "chain_name": "A", "nt_resnum": 44, "nt_name": "A", "nt_code": "A", "nt_id": "///A/44", "linked_nts": [ "///A/43", "///A/45" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": 33.983, "beta": 117.992, "gamma": 7.886, "delta": 147.954, "epsilon": -165.190, "zeta": -122.799, "epsilon_zeta": -42.391, "bb_type": "BI", "chi": -117.379, "glyco_bond": "anti", "C5prime_xyz": [ -2.543, 8.475, -1.262 ], "P_xyz": [ -0.379, 9.428, -0.030 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.755, "theta": -105.315, "eta_prime": -163.033, "theta_prime": -141.744, "eta_base": -102.618, "theta_base": -103.062, "v0": -27.009, "v1": 42.296, "v2": -40.159, "v3": 25.346, "v4": 0.734, "amplitude": 42.704, "phase_angle": 160.120, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.020, "origin": [ 178.815, 282.654, 175.345 ], "x_axis": [ 0.285, -0.144, -0.948 ], "y_axis": [ -0.489, 0.828, -0.273 ], "z_axis": [ 0.824, 0.541, 0.166 ], "quaternion": [ 0.755, -0.270, 0.587, 0.114 ] } }, { "index": 1570, "index_chain": 44, "chain_name": "A", "nt_resnum": 45, "nt_name": "G", "nt_code": "G", "nt_id": "///A/45", "linked_nts": [ "///A/44", "///A/46" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,canonical,helix,stem-end", "alpha": 117.684, "beta": -159.484, "gamma": -163.847, "delta": 81.886, "epsilon": -91.907, "zeta": 131.171, "epsilon_zeta": 136.922, "bb_type": "BII", "chi": -159.088, "glyco_bond": "anti", "C5prime_xyz": [ -1.736, 8.896, 0.348 ], "P_xyz": [ -1.175, 10.724, -1.467 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.310, "theta": 72.355, "eta_prime": 166.204, "theta_prime": 88.400, "eta_base": -138.940, "theta_base": 111.166, "v0": -4.292, "v1": -19.498, "v2": 34.249, "v3": -37.533, "v4": 26.602, "amplitude": 37.759, "phase_angle": 24.901, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 182.792, 283.134, 174.636 ], "x_axis": [ 0.110, 0.481, -0.870 ], "y_axis": [ -0.505, 0.781, 0.368 ], "z_axis": [ 0.856, 0.399, 0.329 ], "quaternion": [ 0.745, -0.011, 0.579, 0.331 ] } }, { "index": 1571, "index_chain": 45, "chain_name": "A", "nt_resnum": 46, "nt_name": "G", "nt_code": "G", "nt_id": "///A/46", "linked_nts": [ "///A/45", "///A/47" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -68.905, "beta": 102.518, "gamma": 104.351, "delta": 75.119, "epsilon": -133.432, "zeta": -77.307, "epsilon_zeta": -56.126, "bb_type": "BI", "chi": -176.836, "glyco_bond": "anti", "C5prime_xyz": [ -1.705, 8.683, 1.449 ], "P_xyz": [ -0.047, 9.535, -0.393 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -144.322, "theta": -148.314, "eta_prime": -130.290, "theta_prime": -156.111, "eta_base": -133.586, "theta_base": -126.258, "v0": -1.609, "v1": -23.314, "v2": 38.121, "v3": -40.008, "v4": 26.161, "amplitude": 40.766, "phase_angle": 20.756, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 181.343, 284.510, 189.462 ], "x_axis": [ 0.932, 0.291, 0.217 ], "y_axis": [ -0.004, 0.605, -0.796 ], "z_axis": [ -0.364, 0.741, 0.565 ], "quaternion": [ 0.881, -0.436, -0.165, 0.084 ] } }, { "index": 1572, "index_chain": 46, "chain_name": "A", "nt_resnum": 47, "nt_name": "C", "nt_code": "C", "nt_id": "///A/47", "linked_nts": [ "///A/46", "///A/48" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -77.025, "beta": 179.876, "gamma": 55.808, "delta": 77.346, "epsilon": -141.557, "zeta": -69.836, "epsilon_zeta": -71.721, "bb_type": "BI", "chi": -162.667, "glyco_bond": "anti", "C5prime_xyz": [ -1.307, 8.764, 0.678 ], "P_xyz": [ 1.268, 9.236, 0.879 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.258, "theta": -140.353, "eta_prime": 169.874, "theta_prime": -137.523, "eta_base": -142.781, "theta_base": -107.046, "v0": 2.473, "v1": -26.203, "v2": 38.720, "v3": -38.190, "v4": 22.472, "amplitude": 40.091, "phase_angle": 15.024, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.724, "filter_rmsd": 0.071, "frame": { "rmsd": 0.015, "origin": [ 181.698, 286.603, 192.696 ], "x_axis": [ 0.754, 0.429, -0.497 ], "y_axis": [ -0.644, 0.335, -0.688 ], "z_axis": [ -0.129, 0.839, 0.529 ], "quaternion": [ 0.809, -0.472, 0.114, 0.332 ] } }, { "index": 1573, "index_chain": 47, "chain_name": "A", "nt_resnum": 48, "nt_name": "G", "nt_code": "G", "nt_id": "///A/48", "linked_nts": [ "///A/47", "///A/49" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -68.116, "beta": 179.032, "gamma": 55.461, "delta": 76.558, "epsilon": -131.310, "zeta": -130.178, "epsilon_zeta": -1.132, "bb_type": "--", "chi": -167.973, "glyco_bond": "anti", "C5prime_xyz": [ -1.454, 8.689, 0.961 ], "P_xyz": [ 1.084, 9.245, 1.291 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.640, "theta": -179.190, "eta_prime": -179.397, "theta_prime": 178.649, "eta_base": -136.088, "theta_base": 135.673, "v0": 3.186, "v1": -27.282, "v2": 39.705, "v3": -38.918, "v4": 22.513, "amplitude": 40.960, "phase_angle": 14.218, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.895, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 183.606, 290.396, 194.280 ], "x_axis": [ 0.227, 0.251, -0.941 ], "y_axis": [ -0.971, -0.017, -0.238 ], "z_axis": [ -0.076, 0.968, 0.240 ], "quaternion": [ 0.602, -0.501, 0.359, 0.507 ] } }, { "index": 1574, "index_chain": 48, "chain_name": "A", "nt_resnum": 49, "nt_name": "A", "nt_code": "A", "nt_id": "///A/49", "linked_nts": [ "///A/48", "///A/50" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-canonical,helix,multiplet", "alpha": 37.561, "beta": -166.199, "gamma": -80.023, "delta": 149.151, "epsilon": -107.022, "zeta": 80.303, "epsilon_zeta": 172.675, "bb_type": "--", "chi": 54.217, "glyco_bond": "syn", "C5prime_xyz": [ -5.298, 3.738, 0.824 ], "P_xyz": [ -7.575, 2.582, 1.346 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -167.429, "theta": 68.205, "eta_prime": 177.008, "theta_prime": 38.086, "eta_base": 129.075, "theta_base": -12.637, "v0": -19.732, "v1": 34.925, "v2": -35.883, "v3": 25.473, "v4": -3.819, "amplitude": 36.817, "phase_angle": 167.065, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32m", "cluster": "7r", "suiteness": 0.253, "filter_rmsd": 0.044, "frame": { "rmsd": 0.014, "origin": [ 181.934, 289.829, 199.435 ], "x_axis": [ 0.518, -0.481, 0.707 ], "y_axis": [ -0.410, 0.586, 0.699 ], "z_axis": [ -0.751, -0.652, 0.106 ], "quaternion": [ 0.743, 0.455, -0.490, -0.024 ] } }, { "index": 1575, "index_chain": 49, "chain_name": "A", "nt_resnum": 50, "nt_name": "U", "nt_code": "U", "nt_id": "///A/50", "linked_nts": [ "///A/49", "///A/51" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": 76.845, "beta": 161.831, "gamma": 75.421, "delta": 142.908, "epsilon": -143.841, "zeta": 14.443, "epsilon_zeta": 201.716, "bb_type": "--", "chi": -143.704, "glyco_bond": "anti", "C5prime_xyz": [ -2.399, 8.777, -0.075 ], "P_xyz": [ 0.007, 9.655, 0.445 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -2.435, "theta": 9.879, "eta_prime": 27.400, "theta_prime": -11.584, "eta_base": 73.399, "theta_base": 0.030, "v0": -27.616, "v1": 39.640, "v2": -35.817, "v3": 20.800, "v4": 4.041, "amplitude": 39.396, "phase_angle": 155.388, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "6p", "suiteness": 0.361, "filter_rmsd": 0.097, "frame": { "rmsd": 0.008, "origin": [ 170.989, 300.961, 192.979 ], "x_axis": [ 0.736, 0.613, -0.286 ], "y_axis": [ 0.535, -0.268, 0.801 ], "z_axis": [ 0.414, -0.743, -0.526 ], "quaternion": [ 0.485, 0.795, 0.361, 0.040 ] } }, { "index": 1576, "index_chain": 50, "chain_name": "A", "nt_resnum": 51, "nt_name": "G", "nt_code": "G", "nt_id": "///A/51", "linked_nts": [ "///A/50", "///A/52" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -128.841, "beta": -134.815, "gamma": 64.404, "delta": 140.341, "epsilon": -116.296, "zeta": 123.307, "epsilon_zeta": 120.397, "bb_type": "--", "chi": -111.970, "glyco_bond": "anti", "C5prime_xyz": [ -1.950, 8.363, -1.675 ], "P_xyz": [ 0.288, 9.320, -0.696 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.972, "theta": 118.718, "eta_prime": -149.833, "theta_prime": 114.665, "eta_base": -141.695, "theta_base": 147.671, "v0": -20.715, "v1": 32.153, "v2": -30.818, "v3": 19.641, "v4": 0.453, "amplitude": 32.703, "phase_angle": 160.451, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 177.202, 293.421, 205.630 ], "x_axis": [ -0.241, 0.925, 0.294 ], "y_axis": [ -0.754, 0.012, -0.656 ], "z_axis": [ -0.611, -0.380, 0.695 ], "quaternion": [ 0.605, -0.114, -0.374, 0.693 ] } }, { "index": 1577, "index_chain": 51, "chain_name": "A", "nt_resnum": 52, "nt_name": "A", "nt_code": "A", "nt_id": "///A/52", "linked_nts": [ "///A/51", "///A/53" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -97.865, "beta": 161.710, "gamma": 63.705, "delta": 85.553, "epsilon": -132.465, "zeta": -86.385, "epsilon_zeta": -46.080, "bb_type": "BI", "chi": -168.074, "glyco_bond": "anti", "C5prime_xyz": [ -1.199, 8.535, 1.029 ], "P_xyz": [ 1.414, 8.653, 0.999 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -171.103, "theta": -140.466, "eta_prime": -174.144, "theta_prime": -139.615, "eta_base": -164.696, "theta_base": -116.721, "v0": 3.930, "v1": -24.293, "v2": 34.196, "v3": -32.887, "v4": 18.321, "amplitude": 35.002, "phase_angle": 12.320, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.267, "filter_rmsd": 0.040, "frame": { "rmsd": 0.016, "origin": [ 178.362, 283.135, 199.624 ], "x_axis": [ -0.208, 0.058, 0.976 ], "y_axis": [ -0.736, 0.648, -0.195 ], "z_axis": [ -0.644, -0.760, -0.091 ], "quaternion": [ 0.581, 0.243, -0.698, 0.342 ] } }, { "index": 1578, "index_chain": 52, "chain_name": "A", "nt_resnum": 53, "nt_name": "A", "nt_code": "A", "nt_id": "///A/53", "linked_nts": [ "///A/52", "///A/54" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -59.282, "beta": 162.364, "gamma": 55.791, "delta": 81.743, "epsilon": -145.902, "zeta": -63.935, "epsilon_zeta": -81.968, "bb_type": "BI", "chi": -152.858, "glyco_bond": "anti", "C5prime_xyz": [ -1.292, 8.712, 0.120 ], "P_xyz": [ 1.296, 8.964, -0.137 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.855, "theta": -96.418, "eta_prime": -176.032, "theta_prime": -101.755, "eta_base": -138.925, "theta_base": -58.103, "v0": 2.495, "v1": -24.306, "v2": 35.736, "v3": -35.231, "v4": 20.688, "amplitude": 36.967, "phase_angle": 14.829, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.711, "filter_rmsd": 0.041, "frame": { "rmsd": 0.016, "origin": [ 176.527, 279.674, 200.151 ], "x_axis": [ -0.564, 0.429, 0.705 ], "y_axis": [ -0.561, 0.427, -0.709 ], "z_axis": [ -0.606, -0.796, 0.000 ], "quaternion": [ -0.464, -0.047, 0.706, -0.533 ] } }, { "index": 1579, "index_chain": 53, "chain_name": "A", "nt_resnum": 54, "nt_name": "A", "nt_code": "A", "nt_id": "///A/54", "linked_nts": [ "///A/53", "///A/55" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 162.004, "beta": -146.766, "gamma": 154.641, "delta": 80.496, "epsilon": -114.496, "zeta": -46.756, "epsilon_zeta": -67.741, "bb_type": "--", "chi": -170.770, "glyco_bond": "anti", "C5prime_xyz": [ -1.133, 8.450, 1.215 ], "P_xyz": [ 0.934, 9.303, -0.111 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 151.847, "theta": -124.024, "eta_prime": -173.942, "theta_prime": -138.426, "eta_base": -101.684, "theta_base": -134.152, "v0": 6.556, "v1": -28.374, "v2": 38.354, "v3": -35.554, "v4": 18.275, "amplitude": 38.842, "phase_angle": 9.096, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.167, "filter_rmsd": 0.042, "frame": { "rmsd": 0.013, "origin": [ 170.397, 281.333, 201.758 ], "x_axis": [ -0.544, 0.747, -0.381 ], "y_axis": [ 0.122, -0.379, -0.917 ], "z_axis": [ -0.830, -0.546, 0.115 ], "quaternion": [ 0.219, -0.424, -0.512, 0.714 ] } }, { "index": 1580, "index_chain": 54, "chain_name": "A", "nt_resnum": 55, "nt_name": "G", "nt_code": "G", "nt_id": "///A/55", "linked_nts": [ "///A/54", "///A/56" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -121.823, "beta": 106.424, "gamma": 157.069, "delta": 83.573, "epsilon": -148.106, "zeta": -71.219, "epsilon_zeta": -76.887, "bb_type": "BI", "chi": 179.622, "glyco_bond": "anti", "C5prime_xyz": [ -1.231, 8.375, 1.667 ], "P_xyz": [ -0.813, 10.524, 0.234 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -177.883, "theta": 167.886, "eta_prime": -171.096, "theta_prime": -176.764, "eta_base": -146.760, "theta_base": -141.492, "v0": 3.136, "v1": -24.508, "v2": 35.188, "v3": -34.415, "v4": 19.771, "amplitude": 36.229, "phase_angle": 13.770, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.028, "filter_rmsd": 0.024, "frame": { "rmsd": 0.024, "origin": [ 166.594, 281.514, 204.090 ], "x_axis": [ -0.374, 0.662, -0.649 ], "y_axis": [ 0.200, -0.626, -0.754 ], "z_axis": [ -0.906, -0.411, 0.102 ], "quaternion": [ 0.160, -0.536, -0.402, 0.725 ] } }, { "index": 1581, "index_chain": 55, "chain_name": "A", "nt_resnum": 56, "nt_name": "A", "nt_code": "A", "nt_id": "///A/56", "linked_nts": [ "///A/55", "///A/57" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -113.435, "beta": -179.086, "gamma": 91.995, "delta": 83.210, "epsilon": -120.693, "zeta": -77.443, "epsilon_zeta": -43.250, "bb_type": "--", "chi": -171.861, "glyco_bond": "anti", "C5prime_xyz": [ -1.181, 8.460, 1.219 ], "P_xyz": [ 1.396, 8.762, 0.896 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.179, "theta": -129.560, "eta_prime": -179.591, "theta_prime": -128.876, "eta_base": -139.371, "theta_base": -85.739, "v0": 4.957, "v1": -26.669, "v2": 37.105, "v3": -35.188, "v4": 19.125, "amplitude": 37.830, "phase_angle": 11.237, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.015, "origin": [ 163.024, 281.452, 205.281 ], "x_axis": [ -0.173, 0.142, -0.975 ], "y_axis": [ 0.354, -0.914, -0.196 ], "z_axis": [ -0.919, -0.379, 0.108 ], "quaternion": [ -0.072, -0.639, -0.194, 0.741 ] } }, { "index": 1582, "index_chain": 56, "chain_name": "A", "nt_resnum": 57, "nt_name": "C", "nt_code": "C", "nt_id": "///A/57", "linked_nts": [ "///A/56", "///A/58" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": -66.521, "beta": 148.554, "gamma": 71.090, "delta": 77.977, "epsilon": -140.383, "zeta": -70.901, "epsilon_zeta": -69.482, "bb_type": "BI", "chi": -155.866, "glyco_bond": "anti", "C5prime_xyz": [ -1.497, 8.826, 0.255 ], "P_xyz": [ 0.893, 9.153, -0.727 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.646, "theta": -138.076, "eta_prime": -176.162, "theta_prime": -142.214, "eta_base": -110.473, "theta_base": -114.805, "v0": 0.902, "v1": -24.952, "v2": 38.282, "v3": -38.665, "v4": 23.803, "amplitude": 40.088, "phase_angle": 17.263, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.280, "filter_rmsd": 0.068, "frame": { "rmsd": 0.014, "origin": [ 160.234, 281.012, 203.266 ], "x_axis": [ 0.022, -0.519, -0.854 ], "y_axis": [ 0.094, -0.850, 0.519 ], "z_axis": [ -0.995, -0.092, 0.030 ], "quaternion": [ -0.225, -0.679, 0.157, 0.681 ] } }, { "index": 1583, "index_chain": 57, "chain_name": "A", "nt_resnum": 58, "nt_name": "G", "nt_code": "G", "nt_id": "///A/58", "linked_nts": [ "///A/57", "///A/59" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -69.922, "beta": 160.569, "gamma": 74.189, "delta": 77.181, "epsilon": -167.955, "zeta": -83.455, "epsilon_zeta": -84.501, "bb_type": "BI", "chi": -163.234, "glyco_bond": "anti", "C5prime_xyz": [ -1.612, 8.811, 0.669 ], "P_xyz": [ 0.858, 9.520, 0.183 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.431, "theta": -135.698, "eta_prime": -172.186, "theta_prime": -140.555, "eta_base": -122.677, "theta_base": -102.094, "v0": -0.348, "v1": -23.847, "v2": 37.739, "v3": -38.797, "v4": 24.773, "amplitude": 39.921, "phase_angle": 19.034, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.341, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 156.854, 280.200, 201.146 ], "x_axis": [ 0.232, -0.885, -0.403 ], "y_axis": [ -0.022, -0.419, 0.908 ], "z_axis": [ -0.973, -0.201, -0.116 ], "quaternion": [ 0.417, 0.665, -0.341, -0.517 ] } }, { "index": 1584, "index_chain": 58, "chain_name": "A", "nt_resnum": 59, "nt_name": "U", "nt_code": "U", "nt_id": "///A/59", "linked_nts": [ "///A/58", "///A/60" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -177.894, "beta": -133.821, "gamma": 140.344, "delta": 81.937, "epsilon": -98.455, "zeta": -118.923, "epsilon_zeta": 20.468, "bb_type": "--", "chi": -165.429, "glyco_bond": "anti", "C5prime_xyz": [ -1.543, 8.766, 0.801 ], "P_xyz": [ 0.798, 9.150, -0.290 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.086, "theta": -128.266, "eta_prime": -171.474, "theta_prime": -124.627, "eta_base": -119.977, "theta_base": -137.126, "v0": -3.268, "v1": -19.331, "v2": 33.237, "v3": -35.980, "v4": 24.771, "amplitude": 36.271, "phase_angle": 23.598, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.105, "frame": { "rmsd": 0.015, "origin": [ 154.375, 277.987, 199.469 ], "x_axis": [ 0.187, -0.931, 0.314 ], "y_axis": [ -0.338, 0.239, 0.910 ], "z_axis": [ -0.922, -0.276, -0.270 ], "quaternion": [ 0.538, 0.552, -0.575, -0.276 ] } }, { "index": 1585, "index_chain": 59, "chain_name": "A", "nt_resnum": 60, "nt_name": "G", "nt_code": "G", "nt_id": "///A/60", "linked_nts": [ "///A/59", "///A/61" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": 25.391, "beta": 164.677, "gamma": -18.254, "delta": 151.962, "epsilon": -107.181, "zeta": -87.154, "epsilon_zeta": -20.027, "bb_type": "--", "chi": -71.319, "glyco_bond": "anti", "C5prime_xyz": [ -3.274, 7.033, -2.845 ], "P_xyz": [ -2.136, 9.149, -3.911 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -166.212, "theta": -55.749, "eta_prime": -148.944, "theta_prime": -118.500, "eta_base": -158.894, "theta_base": -137.913, "v0": -24.107, "v1": 39.699, "v2": -39.142, "v3": 26.229, "v4": -1.558, "amplitude": 40.854, "phase_angle": 163.353, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 148.774, 275.816, 196.629 ], "x_axis": [ 0.441, -0.807, 0.393 ], "y_axis": [ -0.405, 0.211, 0.889 ], "z_axis": [ -0.801, -0.551, -0.234 ], "quaternion": [ 0.595, 0.605, -0.501, -0.169 ] } }, { "index": 1586, "index_chain": 60, "chain_name": "A", "nt_resnum": 61, "nt_name": "G", "nt_code": "G", "nt_id": "///A/61", "linked_nts": [ "///A/60", "///A/62" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI,canonical,helix,stem-end", "alpha": 168.245, "beta": 168.202, "gamma": 34.563, "delta": 79.100, "epsilon": -145.225, "zeta": -87.717, "epsilon_zeta": -57.508, "bb_type": "BI", "chi": -154.523, "glyco_bond": "anti", "C5prime_xyz": [ -1.590, 8.877, 0.186 ], "P_xyz": [ 0.856, 9.622, 0.734 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 0.621, "theta": -125.633, "eta_prime": 61.377, "theta_prime": -135.233, "eta_base": 94.802, "theta_base": -131.138, "v0": -1.915, "v1": -21.472, "v2": 35.381, "v3": -37.438, "v4": 24.790, "amplitude": 38.000, "phase_angle": 21.398, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2g", "suiteness": 0.469, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 136.395, 274.392, 198.805 ], "x_axis": [ 0.517, 0.025, -0.856 ], "y_axis": [ 0.503, 0.800, 0.327 ], "z_axis": [ 0.692, -0.600, 0.401 ], "quaternion": [ 0.824, 0.281, 0.469, -0.145 ] } }, { "index": 1587, "index_chain": 61, "chain_name": "A", "nt_resnum": 62, "nt_name": "U", "nt_code": "U", "nt_id": "///A/62", "linked_nts": [ "///A/61", "///A/63" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 136.507, "beta": -159.602, "gamma": -168.290, "delta": 79.825, "epsilon": -97.732, "zeta": -118.277, "epsilon_zeta": 20.545, "bb_type": "--", "chi": -148.445, "glyco_bond": "anti", "C5prime_xyz": [ -1.598, 8.795, -0.149 ], "P_xyz": [ -0.806, 10.310, -2.099 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.182, "theta": 171.822, "eta_prime": 171.329, "theta_prime": -169.024, "eta_base": -174.304, "theta_base": -148.198, "v0": -0.451, "v1": -22.269, "v2": 35.244, "v3": -36.507, "v4": 23.290, "amplitude": 37.342, "phase_angle": 19.297, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.440, "filter_rmsd": 0.103, "frame": { "rmsd": 0.009, "origin": [ 137.504, 271.128, 198.646 ], "x_axis": [ 0.497, 0.356, -0.792 ], "y_axis": [ 0.581, 0.541, 0.608 ], "z_axis": [ 0.645, -0.762, 0.062 ], "quaternion": [ 0.725, 0.473, 0.496, -0.078 ] } }, { "index": 1588, "index_chain": 62, "chain_name": "A", "nt_resnum": 63, "nt_name": "A", "nt_code": "A", "nt_id": "///A/63", "linked_nts": [ "///A/62", "///A/64" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -87.485, "beta": -175.399, "gamma": 47.073, "delta": 79.911, "epsilon": -143.926, "zeta": -79.960, "epsilon_zeta": -63.966, "bb_type": "BI", "chi": -166.542, "glyco_bond": "anti", "C5prime_xyz": [ -1.223, 8.547, 0.904 ], "P_xyz": [ 1.300, 8.813, 1.537 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.972, "theta": -149.528, "eta_prime": 154.177, "theta_prime": -144.448, "eta_base": 167.793, "theta_base": -123.666, "v0": 5.669, "v1": -28.302, "v2": 39.057, "v3": -36.761, "v4": 19.664, "amplitude": 39.732, "phase_angle": 10.581, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.019, "filter_rmsd": 0.037, "frame": { "rmsd": 0.008, "origin": [ 144.570, 266.533, 199.404 ], "x_axis": [ -0.494, 0.709, -0.503 ], "y_axis": [ -0.167, 0.490, 0.855 ], "z_axis": [ 0.853, 0.506, -0.124 ], "quaternion": [ 0.467, 0.187, 0.726, 0.469 ] } }, { "index": 1589, "index_chain": 63, "chain_name": "A", "nt_resnum": 64, "nt_name": "G", "nt_code": "G", "nt_id": "///A/64", "linked_nts": [ "///A/63", "///A/65" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -55.347, "beta": 165.804, "gamma": 58.424, "delta": 78.819, "epsilon": -137.292, "zeta": -82.183, "epsilon_zeta": -55.109, "bb_type": "BI", "chi": -164.809, "glyco_bond": "anti", "C5prime_xyz": [ -1.469, 8.737, 0.772 ], "P_xyz": [ 1.101, 9.199, 0.684 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.313, "theta": -143.666, "eta_prime": -171.319, "theta_prime": -142.048, "eta_base": -141.326, "theta_base": -115.866, "v0": 1.361, "v1": -24.637, "v2": 37.480, "v3": -37.595, "v4": 22.925, "amplitude": 39.122, "phase_angle": 16.661, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.848, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 147.733, 268.007, 196.962 ], "x_axis": [ -0.541, 0.840, -0.043 ], "y_axis": [ 0.101, 0.116, 0.988 ], "z_axis": [ 0.835, 0.530, -0.147 ], "quaternion": [ 0.327, 0.350, 0.671, 0.565 ] } }, { "index": 1590, "index_chain": 64, "chain_name": "A", "nt_resnum": 65, "nt_name": "C", "nt_code": "C", "nt_id": "///A/65", "linked_nts": [ "///A/64", "///A/66" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -50.250, "beta": 159.680, "gamma": 54.632, "delta": 76.642, "epsilon": -163.009, "zeta": -87.441, "epsilon_zeta": -75.568, "bb_type": "BI", "chi": -156.244, "glyco_bond": "anti", "C5prime_xyz": [ -1.614, 8.900, 0.248 ], "P_xyz": [ 0.913, 9.496, -0.064 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.185, "theta": -138.498, "eta_prime": -174.848, "theta_prime": -145.342, "eta_base": -132.468, "theta_base": -119.735, "v0": -2.169, "v1": -22.164, "v2": 36.812, "v3": -38.969, "v4": 25.949, "amplitude": 39.601, "phase_angle": 21.629, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.692, "filter_rmsd": 0.066, "frame": { "rmsd": 0.012, "origin": [ 149.376, 270.755, 195.139 ], "x_axis": [ -0.450, 0.746, 0.491 ], "y_axis": [ 0.497, -0.248, 0.832 ], "z_axis": [ 0.742, 0.618, -0.259 ], "quaternion": [ 0.104, 0.514, 0.604, 0.600 ] } }, { "index": 1591, "index_chain": 65, "chain_name": "A", "nt_resnum": 66, "nt_name": "C", "nt_code": "C", "nt_id": "///A/66", "linked_nts": [ "///A/65", "///A/67" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end,multiplet", "alpha": 168.541, "beta": -150.204, "gamma": 160.638, "delta": 81.264, "epsilon": -123.264, "zeta": -70.162, "epsilon_zeta": -53.102, "bb_type": "--", "chi": -167.693, "glyco_bond": "anti", "C5prime_xyz": [ -1.159, 8.635, 1.049 ], "P_xyz": [ 0.835, 9.599, -0.337 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.110, "theta": -136.930, "eta_prime": 178.410, "theta_prime": -137.135, "eta_base": -140.143, "theta_base": -101.500, "v0": 3.345, "v1": -25.139, "v2": 36.382, "v3": -35.357, "v4": 20.162, "amplitude": 37.427, "phase_angle": 13.574, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.329, "filter_rmsd": 0.073, "frame": { "rmsd": 0.018, "origin": [ 150.351, 274.082, 194.024 ], "x_axis": [ -0.216, 0.401, 0.890 ], "y_axis": [ 0.778, -0.479, 0.405 ], "z_axis": [ 0.589, 0.780, -0.209 ], "quaternion": [ -0.155, 0.607, 0.486, 0.610 ] } }, { "index": 1592, "index_chain": 66, "chain_name": "A", "nt_resnum": 67, "nt_name": "U", "nt_code": "U", "nt_id": "///A/67", "linked_nts": [ "///A/66", "///A/68" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -61.358, "beta": 171.979, "gamma": 51.213, "delta": 78.884, "epsilon": -159.477, "zeta": -78.884, "epsilon_zeta": -80.593, "bb_type": "BI", "chi": -159.357, "glyco_bond": "anti", "C5prime_xyz": [ -1.524, 8.793, 0.479 ], "P_xyz": [ 0.986, 9.448, 0.761 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.829, "theta": -127.035, "eta_prime": -178.708, "theta_prime": -131.267, "eta_base": -123.353, "theta_base": -93.605, "v0": -0.592, "v1": -22.677, "v2": 36.037, "v3": -37.276, "v4": 23.933, "amplitude": 38.214, "phase_angle": 19.431, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.639, "filter_rmsd": 0.106, "frame": { "rmsd": 0.013, "origin": [ 151.633, 278.090, 195.830 ], "x_axis": [ 0.184, -0.316, 0.931 ], "y_axis": [ 0.744, -0.574, -0.342 ], "z_axis": [ 0.642, 0.756, 0.129 ], "quaternion": [ -0.430, 0.638, 0.168, 0.616 ] } }, { "index": 1593, "index_chain": 67, "chain_name": "A", "nt_resnum": 68, "nt_name": "G", "nt_code": "G", "nt_id": "///A/68", "linked_nts": [ "///A/67", "///A/69" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 163.467, "beta": -148.228, "gamma": 164.531, "delta": 83.177, "epsilon": -126.001, "zeta": -105.141, "epsilon_zeta": -20.860, "bb_type": "--", "chi": 178.450, "glyco_bond": "anti", "C5prime_xyz": [ -1.368, 8.414, 1.785 ], "P_xyz": [ 0.838, 9.583, 1.002 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.150, "theta": -130.523, "eta_prime": -173.957, "theta_prime": -136.595, "eta_base": -116.898, "theta_base": -95.406, "v0": 0.413, "v1": -21.222, "v2": 32.905, "v3": -33.555, "v4": 20.919, "amplitude": 34.591, "phase_angle": 17.966, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.550, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 154.172, 280.177, 199.147 ], "x_axis": [ 0.491, -0.783, 0.383 ], "y_axis": [ 0.394, -0.192, -0.899 ], "z_axis": [ 0.777, 0.592, 0.214 ], "quaternion": [ 0.615, -0.606, 0.160, -0.478 ] } }, { "index": 1594, "index_chain": 68, "chain_name": "A", "nt_resnum": 69, "nt_name": "C", "nt_code": "C", "nt_id": "///A/69", "linked_nts": [ "///A/68", "///A/70" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": 131.171, "beta": -124.000, "gamma": -178.820, "delta": 81.534, "epsilon": -129.107, "zeta": -78.804, "epsilon_zeta": -50.303, "bb_type": "BI", "chi": -171.467, "glyco_bond": "anti", "C5prime_xyz": [ -1.210, 8.596, 1.272 ], "P_xyz": [ 0.517, 9.624, -0.372 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.934, "theta": -153.304, "eta_prime": -177.183, "theta_prime": -147.641, "eta_base": -113.215, "theta_base": -131.520, "v0": 2.425, "v1": -24.108, "v2": 35.604, "v3": -35.132, "v4": 20.593, "amplitude": 36.846, "phase_angle": 14.917, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.010, "filter_rmsd": 0.070, "frame": { "rmsd": 0.015, "origin": [ 157.235, 280.332, 201.227 ], "x_axis": [ 0.750, -0.613, -0.250 ], "y_axis": [ 0.116, 0.494, -0.862 ], "z_axis": [ 0.652, 0.617, 0.441 ], "quaternion": [ 0.819, -0.451, 0.275, -0.222 ] } }, { "index": 1595, "index_chain": 69, "chain_name": "A", "nt_resnum": 70, "nt_name": "G", "nt_code": "G", "nt_id": "///A/70", "linked_nts": [ "///A/69", "///A/71" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -55.844, "beta": 175.754, "gamma": 64.237, "delta": 144.518, "epsilon": -93.804, "zeta": 169.458, "epsilon_zeta": 96.739, "bb_type": "BII", "chi": -128.414, "glyco_bond": "anti", "C5prime_xyz": [ -2.074, 8.703, -0.832 ], "P_xyz": [ 0.293, 9.576, -0.238 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -156.231, "theta": 158.863, "eta_prime": -131.026, "theta_prime": 160.761, "eta_base": -114.105, "theta_base": -178.352, "v0": -25.383, "v1": 38.003, "v2": -35.459, "v3": 21.712, "v4": 2.037, "amplitude": 38.197, "phase_angle": 158.172, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.793, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 160.035, 281.057, 203.708 ], "x_axis": [ 0.442, -0.473, -0.763 ], "y_axis": [ -0.135, 0.805, -0.577 ], "z_axis": [ 0.887, 0.358, 0.292 ], "quaternion": [ 0.797, -0.293, 0.518, -0.106 ] } }, { "index": 1596, "index_chain": 70, "chain_name": "A", "nt_resnum": 71, "nt_name": "A", "nt_code": "A", "nt_id": "///A/71", "linked_nts": [ "///A/70", "///A/72" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-canonical,multiplet", "alpha": -70.350, "beta": -159.053, "gamma": 1.229, "delta": 145.727, "epsilon": -117.303, "zeta": 77.787, "epsilon_zeta": 164.911, "bb_type": "--", "chi": 54.411, "glyco_bond": "syn", "C5prime_xyz": [ -5.349, 3.910, 0.977 ], "P_xyz": [ -7.066, 2.411, -0.303 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -153.805, "theta": 86.978, "eta_prime": -169.287, "theta_prime": 43.551, "eta_base": -161.724, "theta_base": -6.546, "v0": -21.342, "v1": 34.903, "v2": -34.339, "v3": 22.991, "v4": -1.270, "amplitude": 35.877, "phase_angle": 163.162, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.014, "origin": [ 158.331, 284.432, 208.048 ], "x_axis": [ -0.017, -0.664, 0.747 ], "y_axis": [ -0.711, 0.534, 0.458 ], "z_axis": [ -0.703, -0.524, -0.481 ], "quaternion": [ 0.509, 0.482, -0.713, 0.023 ] } }, { "index": 1597, "index_chain": 71, "chain_name": "A", "nt_resnum": 72, "nt_name": "A", "nt_code": "A", "nt_id": "///A/72", "linked_nts": [ "///A/71", "///A/73" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": 51.173, "beta": -178.649, "gamma": 85.484, "delta": 148.598, "epsilon": -99.930, "zeta": -71.243, "epsilon_zeta": -28.687, "bb_type": "--", "chi": -135.717, "glyco_bond": "anti", "C5prime_xyz": [ -1.899, 8.667, -0.355 ], "P_xyz": [ 0.610, 9.134, 0.253 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 10.893, "theta": -51.575, "eta_prime": 37.745, "theta_prime": -74.640, "eta_base": 74.202, "theta_base": -46.061, "v0": -21.507, "v1": 36.080, "v2": -36.058, "v3": 24.577, "v4": -2.163, "amplitude": 37.425, "phase_angle": 164.466, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "6p", "suiteness": 0.032, "filter_rmsd": 0.043, "frame": { "rmsd": 0.014, "origin": [ 155.450, 298.574, 200.542 ], "x_axis": [ 0.612, 0.509, 0.605 ], "y_axis": [ -0.259, -0.594, 0.762 ], "z_axis": [ 0.747, -0.623, -0.232 ], "quaternion": [ 0.443, 0.781, 0.080, 0.433 ] } }, { "index": 1598, "index_chain": 72, "chain_name": "A", "nt_resnum": 73, "nt_name": "A", "nt_code": "A", "nt_id": "///A/73", "linked_nts": [ "///A/72", "///A/74" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -88.470, "beta": -175.357, "gamma": 83.618, "delta": 81.095, "epsilon": -139.021, "zeta": -152.554, "epsilon_zeta": 13.533, "bb_type": "--", "chi": -147.087, "glyco_bond": "anti", "C5prime_xyz": [ -1.306, 8.710, -0.236 ], "P_xyz": [ 1.150, 9.007, -1.063 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.555, "theta": 122.669, "eta_prime": -149.664, "theta_prime": 149.521, "eta_base": -126.707, "theta_base": -173.656, "v0": 2.959, "v1": -25.827, "v2": 37.532, "v3": -36.750, "v4": 21.348, "amplitude": 38.722, "phase_angle": 14.238, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.029, "filter_rmsd": 0.042, "frame": { "rmsd": 0.013, "origin": [ 154.301, 283.907, 207.526 ], "x_axis": [ -0.683, 0.268, 0.679 ], "y_axis": [ -0.440, 0.591, -0.676 ], "z_axis": [ -0.583, -0.761, -0.286 ], "quaternion": [ -0.394, -0.054, 0.800, -0.449 ] } }, { "index": 1599, "index_chain": 73, "chain_name": "A", "nt_resnum": 74, "nt_name": "A", "nt_code": "A", "nt_id": "///A/74", "linked_nts": [ "///A/73", "///A/75" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-canonical,helix", "alpha": -137.850, "beta": 145.600, "gamma": 167.543, "delta": 150.949, "epsilon": -100.317, "zeta": 47.841, "epsilon_zeta": 211.842, "bb_type": "--", "chi": 46.674, "glyco_bond": "syn", "C5prime_xyz": [ -5.335, 3.676, 0.522 ], "P_xyz": [ -6.180, 1.966, 2.304 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -74.911, "theta": 20.990, "eta_prime": -125.928, "theta_prime": 31.553, "eta_base": -169.451, "theta_base": 44.609, "v0": -19.290, "v1": 35.218, "v2": -36.772, "v3": 26.647, "v4": -4.856, "amplitude": 37.524, "phase_angle": 168.510, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.015, "origin": [ 150.546, 278.326, 199.563 ], "x_axis": [ 0.471, -0.853, -0.225 ], "y_axis": [ 0.070, 0.291, -0.954 ], "z_axis": [ 0.880, 0.433, 0.196 ], "quaternion": [ 0.700, -0.496, 0.395, -0.330 ] } }, { "index": 1600, "index_chain": 74, "chain_name": "A", "nt_resnum": 75, "nt_name": "G", "nt_code": "G", "nt_id": "///A/75", "linked_nts": [ "///A/74", "///A/76" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end", "alpha": 135.135, "beta": -164.053, "gamma": -170.661, "delta": 82.121, "epsilon": -144.983, "zeta": -75.106, "epsilon_zeta": -69.877, "bb_type": "BI", "chi": -165.017, "glyco_bond": "anti", "C5prime_xyz": [ -1.554, 8.757, 0.799 ], "P_xyz": [ -0.503, 10.667, -0.652 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -171.814, "theta": -176.216, "eta_prime": -170.359, "theta_prime": -166.008, "eta_base": -135.629, "theta_base": -132.280, "v0": -1.296, "v1": -20.708, "v2": 33.514, "v3": -35.193, "v4": 23.068, "amplitude": 35.813, "phase_angle": 20.638, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 156.135, 291.090, 196.587 ], "x_axis": [ 0.532, -0.208, -0.821 ], "y_axis": [ -0.787, -0.480, -0.388 ], "z_axis": [ -0.314, 0.852, -0.419 ], "quaternion": [ -0.398, 0.780, -0.319, -0.364 ] } }, { "index": 1601, "index_chain": 75, "chain_name": "A", "nt_resnum": 76, "nt_name": "C", "nt_code": "C", "nt_id": "///A/76", "linked_nts": [ "///A/75", "///A/77" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -85.632, "beta": -162.036, "gamma": 52.491, "delta": 79.504, "epsilon": -142.261, "zeta": -116.511, "epsilon_zeta": -25.751, "bb_type": "--", "chi": -166.122, "glyco_bond": "anti", "C5prime_xyz": [ -1.227, 8.676, 0.907 ], "P_xyz": [ 1.237, 8.883, 1.761 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.268, "theta": -162.287, "eta_prime": 170.515, "theta_prime": -153.070, "eta_base": -151.816, "theta_base": -141.315, "v0": 3.507, "v1": -26.811, "v2": 38.859, "v3": -37.641, "v4": 21.471, "amplitude": 39.969, "phase_angle": 13.537, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.531, "filter_rmsd": 0.072, "frame": { "rmsd": 0.014, "origin": [ 155.807, 295.491, 193.514 ], "x_axis": [ 0.108, -0.829, -0.549 ], "y_axis": [ -0.868, -0.348, 0.355 ], "z_axis": [ -0.485, 0.438, -0.757 ], "quaternion": [ -0.028, 0.744, -0.570, -0.348 ] } }, { "index": 1602, "index_chain": 76, "chain_name": "A", "nt_resnum": 77, "nt_name": "U", "nt_code": "U", "nt_id": "///A/77", "linked_nts": [ "///A/76", "///A/78" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -3.431, "beta": 134.265, "gamma": 37.426, "delta": 80.071, "epsilon": -155.604, "zeta": -81.744, "epsilon_zeta": -73.860, "bb_type": "BI", "chi": -153.567, "glyco_bond": "anti", "C5prime_xyz": [ -1.841, 8.836, 0.127 ], "P_xyz": [ 0.764, 9.087, 0.171 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -174.980, "theta": -116.015, "eta_prime": -166.171, "theta_prime": -127.168, "eta_base": -154.026, "theta_base": -97.397, "v0": -3.590, "v1": -19.150, "v2": 33.294, "v3": -36.333, "v4": 25.158, "amplitude": 36.486, "phase_angle": 24.144, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.103, "frame": { "rmsd": 0.012, "origin": [ 155.584, 298.565, 190.275 ], "x_axis": [ -0.129, -0.900, -0.416 ], "y_axis": [ -0.890, -0.080, 0.449 ], "z_axis": [ -0.437, 0.428, -0.791 ], "quaternion": [ -0.008, -0.660, 0.678, 0.323 ] } }, { "index": 1603, "index_chain": 77, "chain_name": "A", "nt_resnum": 78, "nt_name": "U", "nt_code": "U", "nt_id": "///A/78", "linked_nts": [ "///A/77", "///A/79" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 151.140, "beta": -149.339, "gamma": 176.182, "delta": 80.785, "epsilon": -103.524, "zeta": -128.112, "epsilon_zeta": 24.588, "bb_type": "--", "chi": -160.417, "glyco_bond": "anti", "C5prime_xyz": [ -1.506, 8.728, 0.564 ], "P_xyz": [ -0.114, 10.026, -1.216 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.813, "theta": -151.401, "eta_prime": -175.726, "theta_prime": -159.146, "eta_base": -127.051, "theta_base": -140.979, "v0": 0.342, "v1": -23.189, "v2": 36.013, "v3": -36.837, "v4": 22.962, "amplitude": 37.892, "phase_angle": 18.119, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.781, "filter_rmsd": 0.103, "frame": { "rmsd": 0.013, "origin": [ 154.571, 297.564, 186.594 ], "x_axis": [ -0.591, -0.805, -0.050 ], "y_axis": [ -0.751, 0.527, 0.398 ], "z_axis": [ -0.294, 0.273, -0.916 ], "quaternion": [ -0.070, -0.447, 0.871, 0.192 ] } }, { "index": 1604, "index_chain": 78, "chain_name": "A", "nt_resnum": 79, "nt_name": "C", "nt_code": "C", "nt_id": "///A/79", "linked_nts": [ "///A/78", "///A/80" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem,multiplet", "alpha": 103.960, "beta": -119.015, "gamma": -172.361, "delta": 78.977, "epsilon": -118.504, "zeta": -73.360, "epsilon_zeta": -45.144, "bb_type": "--", "chi": -173.071, "glyco_bond": "anti", "C5prime_xyz": [ -1.166, 8.537, 1.344 ], "P_xyz": [ 0.246, 9.772, -0.456 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 147.148, "theta": -144.693, "eta_prime": 163.185, "theta_prime": -146.140, "eta_base": -164.515, "theta_base": -111.307, "v0": 5.238, "v1": -28.067, "v2": 39.210, "v3": -37.103, "v4": 19.980, "amplitude": 39.964, "phase_angle": 11.147, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.071, "frame": { "rmsd": 0.014, "origin": [ 153.700, 297.277, 182.978 ], "x_axis": [ -0.675, -0.582, 0.454 ], "y_axis": [ -0.509, 0.812, 0.285 ], "z_axis": [ -0.535, -0.038, -0.844 ], "quaternion": [ -0.271, -0.299, 0.913, 0.068 ] } }, { "index": 1605, "index_chain": 79, "chain_name": "A", "nt_resnum": 80, "nt_name": "G", "nt_code": "G", "nt_id": "///A/80", "linked_nts": [ "///A/79", "///A/81" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -66.260, "beta": 173.455, "gamma": 51.147, "delta": 75.758, "epsilon": -149.580, "zeta": -78.795, "epsilon_zeta": -70.785, "bb_type": "BI", "chi": -167.900, "glyco_bond": "anti", "C5prime_xyz": [ -1.541, 8.714, 0.935 ], "P_xyz": [ 0.952, 9.373, 1.239 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.280, "theta": -156.384, "eta_prime": 173.115, "theta_prime": -153.167, "eta_base": -131.945, "theta_base": -127.118, "v0": 1.250, "v1": -26.262, "v2": 39.956, "v3": -40.262, "v4": 24.579, "amplitude": 41.757, "phase_angle": 16.886, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.503, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 150.270, 294.946, 181.229 ], "x_axis": [ -0.583, 0.165, 0.795 ], "y_axis": [ 0.076, 0.986, -0.149 ], "z_axis": [ -0.809, -0.026, -0.588 ], "quaternion": [ -0.451, 0.068, 0.888, -0.049 ] } }, { "index": 1606, "index_chain": 80, "chain_name": "A", "nt_resnum": 81, "nt_name": "G", "nt_code": "G", "nt_id": "///A/81", "linked_nts": [ "///A/80", "///A/82" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -57.453, "beta": 174.074, "gamma": 45.267, "delta": 68.229, "epsilon": 83.507, "zeta": 80.159, "epsilon_zeta": 3.347, "bb_type": "--", "chi": -164.867, "glyco_bond": "anti", "C5prime_xyz": [ -1.299, 8.646, 0.811 ], "P_xyz": [ 1.269, 8.979, 1.122 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -171.915, "theta": -98.098, "eta_prime": -159.640, "theta_prime": -108.841, "eta_base": -127.110, "theta_base": -87.762, "v0": 6.540, "v1": -30.664, "v2": 42.590, "v3": -39.777, "v4": 20.999, "amplitude": 43.274, "phase_angle": 10.194, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.503, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 147.184, 293.312, 180.269 ], "x_axis": [ -0.331, 0.662, 0.673 ], "y_axis": [ 0.317, 0.749, -0.581 ], "z_axis": [ -0.889, 0.021, -0.458 ], "quaternion": [ -0.490, 0.307, 0.797, -0.176 ] } }, { "index": 1607, "index_chain": 81, "chain_name": "A", "nt_resnum": 82, "nt_name": "G", "nt_code": "G", "nt_id": "///A/82", "linked_nts": [ "///A/81", "///A/83" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": 44.746, "beta": -165.914, "gamma": -138.853, "delta": 148.887, "epsilon": -146.126, "zeta": -98.809, "epsilon_zeta": -47.317, "bb_type": "BI", "chi": -120.487, "glyco_bond": "anti", "C5prime_xyz": [ -1.801, 8.493, -1.098 ], "P_xyz": [ -0.834, 10.035, -2.938 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.693, "theta": -163.051, "eta_prime": -154.470, "theta_prime": -156.130, "eta_base": -121.240, "theta_base": -91.011, "v0": -19.675, "v1": 34.551, "v2": -35.453, "v3": 24.927, "v4": -3.444, "amplitude": 36.435, "phase_angle": 166.669, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 143.944, 293.878, 181.003 ], "x_axis": [ 0.059, 0.942, 0.332 ], "y_axis": [ 0.076, 0.327, -0.942 ], "z_axis": [ -0.995, 0.081, -0.052 ], "quaternion": [ 0.577, -0.443, -0.574, 0.375 ] } }, { "index": 1608, "index_chain": 82, "chain_name": "A", "nt_resnum": 83, "nt_name": "G", "nt_code": "G", "nt_id": "///A/83", "linked_nts": [ "///A/82", "///A/84" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -65.848, "beta": 160.928, "gamma": 50.069, "delta": 76.439, "epsilon": 163.554, "zeta": -91.546, "epsilon_zeta": -104.900, "bb_type": "BI", "chi": -103.668, "glyco_bond": "anti", "C5prime_xyz": [ -2.645, 7.888, -2.504 ], "P_xyz": [ -0.671, 8.107, -4.188 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.061, "theta": 157.166, "eta_prime": -172.806, "theta_prime": 156.417, "eta_base": -102.571, "theta_base": 146.117, "v0": -2.938, "v1": -21.890, "v2": 36.661, "v3": -39.406, "v4": 26.793, "amplitude": 39.746, "phase_angle": 22.721, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.029, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 140.120, 297.127, 178.566 ], "x_axis": [ -0.234, 0.763, -0.603 ], "y_axis": [ -0.245, -0.646, -0.723 ], "z_axis": [ -0.941, -0.021, 0.338 ], "quaternion": [ 0.339, -0.518, -0.250, 0.745 ] } }, { "index": 1609, "index_chain": 83, "chain_name": "A", "nt_resnum": 84, "nt_name": "A", "nt_code": "A", "nt_id": "///A/84", "linked_nts": [ "///A/83", "///A/85" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical", "alpha": -65.041, "beta": -179.078, "gamma": 65.544, "delta": 145.389, "epsilon": -91.334, "zeta": 162.243, "epsilon_zeta": 106.424, "bb_type": "BII", "chi": -120.006, "glyco_bond": "anti", "C5prime_xyz": [ -2.148, 8.560, -1.269 ], "P_xyz": [ 0.199, 9.625, -0.804 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -152.618, "theta": 164.270, "eta_prime": -150.410, "theta_prime": 152.414, "eta_base": -169.130, "theta_base": 178.123, "v0": -24.994, "v1": 38.486, "v2": -36.548, "v3": 23.061, "v4": 0.956, "amplitude": 38.942, "phase_angle": 159.804, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.028, "filter_rmsd": 0.042, "frame": { "rmsd": 0.014, "origin": [ 136.017, 292.028, 183.156 ], "x_axis": [ 0.206, 0.932, -0.297 ], "y_axis": [ -0.041, -0.295, -0.955 ], "z_axis": [ -0.978, 0.209, -0.022 ], "quaternion": [ -0.471, 0.617, 0.361, -0.516 ] } }, { "index": 1610, "index_chain": 84, "chain_name": "A", "nt_resnum": 85, "nt_name": "G", "nt_code": "G", "nt_id": "///A/85", "linked_nts": [ "///A/84", "///A/86" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix-end,stem-end,multiplet", "alpha": -86.666, "beta": 87.066, "gamma": 130.908, "delta": 77.637, "epsilon": -148.539, "zeta": -66.521, "epsilon_zeta": -82.018, "bb_type": "BI", "chi": -168.590, "glyco_bond": "anti", "C5prime_xyz": [ -1.543, 8.698, 0.974 ], "P_xyz": [ -1.205, 9.694, -1.443 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -137.411, "theta": -171.639, "eta_prime": -136.804, "theta_prime": -171.593, "eta_base": -107.406, "theta_base": -141.296, "v0": 1.449, "v1": -25.615, "v2": 38.646, "v3": -38.799, "v4": 23.566, "amplitude": 40.313, "phase_angle": 16.530, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 133.369, 285.882, 187.192 ], "x_axis": [ -0.854, -0.494, 0.164 ], "y_axis": [ 0.035, -0.368, -0.929 ], "z_axis": [ 0.520, -0.788, 0.331 ], "quaternion": [ -0.166, 0.214, -0.537, 0.799 ] } }, { "index": 1611, "index_chain": 85, "chain_name": "A", "nt_resnum": 86, "nt_name": "U", "nt_code": "U", "nt_id": "///A/86", "linked_nts": [ "///A/85", "///A/87" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -74.128, "beta": 177.556, "gamma": 64.713, "delta": 78.466, "epsilon": -141.118, "zeta": -107.623, "epsilon_zeta": -33.495, "bb_type": "BI", "chi": -158.066, "glyco_bond": "anti", "C5prime_xyz": [ -1.582, 8.796, 0.380 ], "P_xyz": [ 0.939, 9.487, 0.265 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.142, "theta": -167.486, "eta_prime": -174.947, "theta_prime": -164.490, "eta_base": -132.021, "theta_base": -164.439, "v0": -0.360, "v1": -23.084, "v2": 36.452, "v3": -37.593, "v4": 23.948, "amplitude": 38.572, "phase_angle": 19.086, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.728, "filter_rmsd": 0.107, "frame": { "rmsd": 0.009, "origin": [ 133.388, 283.210, 189.948 ], "x_axis": [ -0.695, -0.580, -0.426 ], "y_axis": [ 0.593, -0.127, -0.795 ], "z_axis": [ 0.407, -0.805, 0.432 ], "quaternion": [ -0.391, -0.006, -0.533, 0.751 ] } }, { "index": 1612, "index_chain": 86, "chain_name": "A", "nt_resnum": 87, "nt_name": "C", "nt_code": "C", "nt_id": "///A/87", "linked_nts": [ "///A/86", "///A/88" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -33.461, "beta": 150.233, "gamma": 43.379, "delta": 79.027, "epsilon": -144.014, "zeta": 126.625, "epsilon_zeta": 89.362, "bb_type": "--", "chi": -145.511, "glyco_bond": "anti", "C5prime_xyz": [ -1.864, 8.893, -0.397 ], "P_xyz": [ 0.661, 9.471, -0.737 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.008, "theta": 61.424, "eta_prime": -179.065, "theta_prime": 63.379, "eta_base": -176.571, "theta_base": -173.863, "v0": -4.622, "v1": -18.868, "v2": 33.729, "v3": -37.370, "v4": 26.505, "amplitude": 37.385, "phase_angle": 25.552, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.056, "filter_rmsd": 0.061, "frame": { "rmsd": 0.008, "origin": [ 134.709, 281.611, 193.619 ], "x_axis": [ -0.603, -0.521, -0.604 ], "y_axis": [ 0.767, -0.169, -0.619 ], "z_axis": [ 0.221, -0.837, 0.501 ], "quaternion": [ -0.427, -0.127, -0.483, 0.754 ] } }, { "index": 1613, "index_chain": 87, "chain_name": "A", "nt_resnum": 88, "nt_name": "G", "nt_code": "G", "nt_id": "///A/88", "linked_nts": [ "///A/87", "///A/89" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -36.354, "beta": 176.033, "gamma": 50.078, "delta": 80.276, "epsilon": -141.812, "zeta": -67.629, "epsilon_zeta": -74.182, "bb_type": "BI", "chi": 176.344, "glyco_bond": "anti", "C5prime_xyz": [ -1.428, 8.377, 1.865 ], "P_xyz": [ 0.980, 8.453, 2.905 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -125.712, "theta": -135.367, "eta_prime": -117.343, "theta_prime": -131.665, "eta_base": 134.468, "theta_base": -98.666, "v0": 1.959, "v1": -24.601, "v2": 36.677, "v3": -36.490, "v4": 21.772, "amplitude": 38.096, "phase_angle": 15.688, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "9a", "suiteness": 0.184, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 151.273, 274.267, 193.996 ], "x_axis": [ -0.309, 0.127, 0.943 ], "y_axis": [ -0.639, 0.706, -0.305 ], "z_axis": [ -0.705, -0.696, -0.137 ], "quaternion": [ 0.561, 0.174, -0.734, 0.341 ] } }, { "index": 1614, "index_chain": 88, "chain_name": "A", "nt_resnum": 89, "nt_name": "G", "nt_code": "G", "nt_id": "///A/89", "linked_nts": [ "///A/88", "///A/90" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -73.775, "beta": 179.925, "gamma": 61.201, "delta": 78.225, "epsilon": -149.741, "zeta": -68.513, "epsilon_zeta": -81.228, "bb_type": "BI", "chi": -168.886, "glyco_bond": "anti", "C5prime_xyz": [ -1.257, 8.663, 1.045 ], "P_xyz": [ 1.329, 9.047, 1.344 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.663, "theta": -145.096, "eta_prime": -176.284, "theta_prime": -143.142, "eta_base": -125.531, "theta_base": -121.189, "v0": 3.537, "v1": -27.066, "v2": 39.015, "v3": -37.862, "v4": 21.649, "amplitude": 40.130, "phase_angle": 13.536, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.836, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 149.245, 270.690, 195.405 ], "x_axis": [ -0.699, 0.520, 0.490 ], "y_axis": [ -0.235, 0.480, -0.845 ], "z_axis": [ -0.675, -0.706, -0.213 ], "quaternion": [ -0.377, 0.092, 0.773, -0.502 ] } }, { "index": 1615, "index_chain": 89, "chain_name": "A", "nt_resnum": 90, "nt_name": "C", "nt_code": "C", "nt_id": "///A/90", "linked_nts": [ "///A/89", "///A/91" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -73.349, "beta": 179.830, "gamma": 63.307, "delta": 80.424, "epsilon": -111.287, "zeta": -22.025, "epsilon_zeta": -89.263, "bb_type": "--", "chi": -158.767, "glyco_bond": "anti", "C5prime_xyz": [ -1.441, 8.829, 0.441 ], "P_xyz": [ 1.107, 9.398, 0.518 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -179.149, "theta": -61.691, "eta_prime": -170.147, "theta_prime": -78.328, "eta_base": -140.498, "theta_base": -168.816, "v0": -0.734, "v1": -22.029, "v2": 35.080, "v3": -36.456, "v4": 23.437, "amplitude": 37.254, "phase_angle": 19.673, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.786, "filter_rmsd": 0.067, "frame": { "rmsd": 0.010, "origin": [ 147.038, 268.141, 196.877 ], "x_axis": [ -0.671, 0.741, -0.009 ], "y_axis": [ 0.071, 0.051, -0.996 ], "z_axis": [ -0.738, -0.669, -0.087 ], "quaternion": [ -0.271, 0.302, 0.673, -0.619 ] } }, { "index": 1616, "index_chain": 90, "chain_name": "A", "nt_resnum": 91, "nt_name": "A", "nt_code": "A", "nt_id": "///A/91", "linked_nts": [ "///A/90", "///A/92" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BII,non-canonical,helix", "alpha": -105.436, "beta": -159.384, "gamma": -14.688, "delta": 151.522, "epsilon": -92.179, "zeta": 146.842, "epsilon_zeta": 120.980, "bb_type": "BII", "chi": 37.649, "glyco_bond": "syn", "C5prime_xyz": [ -5.595, 4.070, 0.089 ], "P_xyz": [ -7.544, 3.306, -1.503 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 93.786, "theta": 150.212, "eta_prime": 133.094, "theta_prime": 137.014, "eta_base": 70.305, "theta_base": 157.559, "v0": -24.630, "v1": 39.688, "v2": -38.617, "v3": 25.519, "v4": -0.840, "amplitude": 40.539, "phase_angle": 162.287, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.015, "origin": [ 146.246, 264.946, 196.687 ], "x_axis": [ -0.166, 0.506, 0.847 ], "y_axis": [ -0.691, 0.553, -0.465 ], "z_axis": [ -0.703, -0.663, 0.258 ], "quaternion": [ 0.641, 0.077, -0.604, 0.467 ] } }, { "index": 1617, "index_chain": 91, "chain_name": "A", "nt_resnum": 92, "nt_name": "A", "nt_code": "A", "nt_id": "///A/92", "linked_nts": [ "///A/91", "///A/93" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII", "alpha": -67.614, "beta": 138.913, "gamma": -15.691, "delta": 154.222, "epsilon": -55.828, "zeta": -158.968, "epsilon_zeta": 103.141, "bb_type": "BII", "chi": -167.269, "glyco_bond": "anti", "C5prime_xyz": [ -2.710, 8.420, 1.283 ], "P_xyz": [ -2.515, 8.634, 3.882 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.523, "theta": -152.376, "eta_prime": 159.319, "theta_prime": -160.317, "eta_base": -171.671, "theta_base": -124.425, "v0": -25.313, "v1": 41.694, "v2": -40.983, "v3": 27.441, "v4": -1.547, "amplitude": 42.804, "phase_angle": 163.226, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.034, "frame": { "rmsd": 0.015, "origin": [ 140.389, 266.377, 197.695 ], "x_axis": [ 0.645, -0.714, 0.274 ], "y_axis": [ -0.031, -0.382, -0.924 ], "z_axis": [ 0.764, 0.587, -0.268 ], "quaternion": [ -0.499, 0.758, -0.246, 0.342 ] } }, { "index": 1618, "index_chain": 92, "chain_name": "A", "nt_resnum": 93, "nt_name": "A", "nt_code": "A", "nt_id": "///A/93", "linked_nts": [ "///A/92", "///A/94" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -125.693, "beta": 94.543, "gamma": 103.360, "delta": 77.038, "epsilon": -104.081, "zeta": -105.165, "epsilon_zeta": 1.084, "bb_type": "--", "chi": -174.154, "glyco_bond": "anti", "C5prime_xyz": [ -1.583, 8.606, 1.324 ], "P_xyz": [ -0.064, 9.185, -0.723 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.903, "theta": -152.401, "eta_prime": -178.729, "theta_prime": -155.840, "eta_base": -135.675, "theta_base": -124.450, "v0": 0.765, "v1": -24.493, "v2": 37.648, "v3": -38.218, "v4": 23.613, "amplitude": 39.479, "phase_angle": 17.517, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.009, "origin": [ 137.197, 271.351, 198.112 ], "x_axis": [ 0.575, 0.702, -0.421 ], "y_axis": [ -0.236, -0.350, -0.907 ], "z_axis": [ -0.783, 0.621, -0.036 ], "quaternion": [ 0.545, -0.700, -0.166, 0.430 ] } }, { "index": 1619, "index_chain": 93, "chain_name": "A", "nt_resnum": 94, "nt_name": "C", "nt_code": "C", "nt_id": "///A/94", "linked_nts": [ "///A/93", "///A/95" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -50.899, "beta": 132.677, "gamma": 60.967, "delta": 77.373, "epsilon": -141.724, "zeta": -96.945, "epsilon_zeta": -44.778, "bb_type": "BI", "chi": -149.337, "glyco_bond": "anti", "C5prime_xyz": [ -1.778, 8.908, -0.158 ], "P_xyz": [ 0.585, 9.078, -1.251 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.260, "theta": -123.768, "eta_prime": 177.114, "theta_prime": -138.310, "eta_base": -134.676, "theta_base": -129.034, "v0": -3.458, "v1": -20.442, "v2": 35.210, "v3": -38.162, "v4": 26.231, "amplitude": 38.432, "phase_angle": 23.629, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.694, "filter_rmsd": 0.063, "frame": { "rmsd": 0.007, "origin": [ 136.256, 273.880, 198.007 ], "x_axis": [ 0.391, 0.380, -0.839 ], "y_axis": [ -0.759, -0.382, -0.527 ], "z_axis": [ -0.521, 0.842, 0.139 ], "quaternion": [ 0.536, -0.639, 0.148, 0.532 ] } }, { "index": 1620, "index_chain": 94, "chain_name": "A", "nt_resnum": 95, "nt_name": "A", "nt_code": "A", "nt_id": "///A/95", "linked_nts": [ "///A/94", "///A/96" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": 116.174, "beta": -133.844, "gamma": -144.287, "delta": 83.048, "epsilon": -136.997, "zeta": -64.542, "epsilon_zeta": -72.455, "bb_type": "BI", "chi": 177.708, "glyco_bond": "anti", "C5prime_xyz": [ -1.572, 8.351, 1.799 ], "P_xyz": [ -0.566, 10.571, 0.868 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -175.829, "theta": -140.524, "eta_prime": -167.133, "theta_prime": -141.098, "eta_base": -136.492, "theta_base": -82.779, "v0": 1.081, "v1": -22.457, "v2": 34.162, "v3": -34.461, "v4": 21.077, "amplitude": 35.710, "phase_angle": 16.928, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.037, "frame": { "rmsd": 0.009, "origin": [ 135.869, 279.021, 197.687 ], "x_axis": [ 0.218, -0.003, -0.976 ], "y_axis": [ -0.772, -0.613, -0.170 ], "z_axis": [ -0.597, 0.790, -0.136 ], "quaternion": [ -0.343, 0.701, -0.276, -0.561 ] } }, { "index": 1621, "index_chain": 95, "chain_name": "A", "nt_resnum": 96, "nt_name": "G", "nt_code": "G", "nt_id": "///A/96", "linked_nts": [ "///A/95", "///A/97" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 171.083, "beta": -167.092, "gamma": 150.158, "delta": 82.703, "epsilon": -125.503, "zeta": -90.286, "epsilon_zeta": -35.217, "bb_type": "--", "chi": -166.371, "glyco_bond": "anti", "C5prime_xyz": [ -0.986, 8.533, 0.929 ], "P_xyz": [ 0.938, 9.538, -0.537 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 142.426, "theta": -124.152, "eta_prime": 173.198, "theta_prime": -133.139, "eta_base": -107.270, "theta_base": -126.783, "v0": 7.050, "v1": -28.009, "v2": 37.229, "v3": -34.213, "v4": 17.154, "amplitude": 37.605, "phase_angle": 8.101, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.031, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 134.478, 281.008, 193.752 ], "x_axis": [ -0.579, -0.463, -0.671 ], "y_axis": [ -0.701, -0.138, 0.700 ], "z_axis": [ -0.417, 0.875, -0.245 ], "quaternion": [ 0.098, -0.448, 0.649, 0.607 ] } }, { "index": 1622, "index_chain": 96, "chain_name": "A", "nt_resnum": 97, "nt_name": "A", "nt_code": "A", "nt_id": "///A/97", "linked_nts": [ "///A/96", "///A/98" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 111.170, "beta": -128.116, "gamma": -134.436, "delta": 80.398, "epsilon": -125.701, "zeta": -92.103, "epsilon_zeta": -33.598, "bb_type": "--", "chi": -173.403, "glyco_bond": "anti", "C5prime_xyz": [ -1.638, 8.584, 1.265 ], "P_xyz": [ -1.349, 10.838, -0.050 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -171.940, "theta": 165.295, "eta_prime": -158.429, "theta_prime": 179.430, "eta_base": -131.410, "theta_base": -145.174, "v0": -0.512, "v1": -22.304, "v2": 35.337, "v3": -36.548, "v4": 23.430, "amplitude": 37.452, "phase_angle": 19.347, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.038, "frame": { "rmsd": 0.011, "origin": [ 133.823, 283.121, 189.774 ], "x_axis": [ -0.798, -0.369, -0.476 ], "y_axis": [ -0.554, 0.141, 0.820 ], "z_axis": [ -0.236, 0.919, -0.317 ], "quaternion": [ 0.080, -0.307, 0.751, 0.579 ] } }, { "index": 1623, "index_chain": 97, "chain_name": "A", "nt_resnum": 98, "nt_name": "C", "nt_code": "C", "nt_id": "///A/98", "linked_nts": [ "///A/97", "///A/99" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end,multiplet", "alpha": -70.672, "beta": 155.647, "gamma": 66.470, "delta": 82.604, "epsilon": -149.327, "zeta": -61.247, "epsilon_zeta": -88.080, "bb_type": "BI", "chi": -159.652, "glyco_bond": "anti", "C5prime_xyz": [ -1.326, 8.793, 0.490 ], "P_xyz": [ 1.241, 9.040, 0.006 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.912, "theta": -130.255, "eta_prime": 176.535, "theta_prime": -128.686, "eta_base": -143.356, "theta_base": -127.599, "v0": 1.235, "v1": -23.039, "v2": 34.804, "v3": -34.932, "v4": 21.279, "amplitude": 36.318, "phase_angle": 16.603, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.408, "filter_rmsd": 0.067, "frame": { "rmsd": 0.009, "origin": [ 133.177, 285.527, 187.476 ], "x_axis": [ -0.939, -0.321, 0.122 ], "y_axis": [ -0.052, 0.486, 0.872 ], "z_axis": [ -0.339, 0.813, -0.473 ], "quaternion": [ -0.135, -0.110, 0.851, 0.495 ] } }, { "index": 1624, "index_chain": 98, "chain_name": "A", "nt_resnum": 99, "nt_name": "U", "nt_code": "U", "nt_id": "///A/99", "linked_nts": [ "///A/98", "///A/100" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -85.072, "beta": -150.995, "gamma": 52.386, "delta": 143.307, "epsilon": -156.626, "zeta": -108.145, "epsilon_zeta": -48.481, "bb_type": "BI", "chi": -120.812, "glyco_bond": "anti", "C5prime_xyz": [ -2.129, 8.525, -1.212 ], "P_xyz": [ -0.060, 9.848, -0.271 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.613, "theta": -157.231, "eta_prime": -169.451, "theta_prime": -178.199, "eta_base": -155.095, "theta_base": 164.393, "v0": -24.038, "v1": 36.668, "v2": -34.464, "v3": 21.468, "v4": 1.362, "amplitude": 36.902, "phase_angle": 159.055, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1[", "suiteness": 0.550, "filter_rmsd": 0.096, "frame": { "rmsd": 0.019, "origin": [ 131.308, 287.275, 184.489 ], "x_axis": [ -0.435, -0.578, 0.691 ], "y_axis": [ 0.261, 0.653, 0.711 ], "z_axis": [ -0.862, 0.489, -0.134 ], "quaternion": [ 0.521, 0.106, -0.745, -0.403 ] } }, { "index": 1625, "index_chain": 99, "chain_name": "A", "nt_resnum": 100, "nt_name": "U", "nt_code": "U", "nt_id": "///A/100", "linked_nts": [ "///A/99", "///A/101" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII", "alpha": -41.909, "beta": -100.298, "gamma": -59.070, "delta": 149.930, "epsilon": -96.653, "zeta": 149.987, "epsilon_zeta": 113.360, "bb_type": "BII", "chi": -125.306, "glyco_bond": "anti", "C5prime_xyz": [ -1.986, 8.568, -0.927 ], "P_xyz": [ -3.055, 10.869, -1.605 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -161.475, "theta": 92.037, "eta_prime": 177.087, "theta_prime": 97.867, "eta_base": 156.897, "theta_base": 114.255, "v0": -22.800, "v1": 37.376, "v2": -36.652, "v3": 24.503, "v4": -1.240, "amplitude": 38.321, "phase_angle": 163.025, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.098, "frame": { "rmsd": 0.012, "origin": [ 132.996, 291.722, 175.389 ], "x_axis": [ -0.337, -0.931, 0.143 ], "y_axis": [ -0.185, 0.214, 0.959 ], "z_axis": [ -0.923, 0.297, -0.245 ], "quaternion": [ -0.398, -0.416, 0.670, 0.469 ] } }, { "index": 1626, "index_chain": 100, "chain_name": "A", "nt_resnum": 101, "nt_name": "U", "nt_code": "U", "nt_id": "///A/101", "linked_nts": [ "///A/100", "///A/102" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical", "alpha": -92.719, "beta": 67.593, "gamma": 158.480, "delta": 151.846, "epsilon": -74.645, "zeta": -137.060, "epsilon_zeta": 62.415, "bb_type": "--", "chi": -111.899, "glyco_bond": "anti", "C5prime_xyz": [ -2.626, 8.353, -1.552 ], "P_xyz": [ -2.834, 7.755, -4.118 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -52.543, "theta": -174.582, "eta_prime": -99.253, "theta_prime": -147.228, "eta_base": -108.098, "theta_base": -127.721, "v0": -27.483, "v1": 42.396, "v2": -39.999, "v3": 25.241, "v4": 1.273, "amplitude": 42.690, "phase_angle": 159.547, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "4s", "suiteness": 0.326, "filter_rmsd": 0.099, "frame": { "rmsd": 0.012, "origin": [ 135.996, 294.188, 174.847 ], "x_axis": [ -0.077, 0.537, -0.840 ], "y_axis": [ 0.077, 0.843, 0.532 ], "z_axis": [ 0.994, -0.023, -0.106 ], "quaternion": [ 0.644, 0.216, 0.712, 0.179 ] } }, { "index": 1627, "index_chain": 101, "chain_name": "A", "nt_resnum": 102, "nt_name": "G", "nt_code": "G", "nt_id": "///A/102", "linked_nts": [ "///A/101", "///A/103" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack,non-canonical,multiplet", "alpha": 9.035, "beta": 143.118, "gamma": -46.457, "delta": 142.653, "epsilon": -116.492, "zeta": 80.709, "epsilon_zeta": 162.799, "bb_type": "--", "chi": -127.300, "glyco_bond": "anti", "C5prime_xyz": [ -2.426, 8.688, -0.820 ], "P_xyz": [ -2.107, 10.852, 0.596 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 139.958, "theta": 89.150, "eta_prime": -179.739, "theta_prime": 61.865, "eta_base": -151.973, "theta_base": 58.582, "v0": -25.767, "v1": 37.979, "v2": -35.076, "v3": 21.100, "v4": 2.704, "amplitude": 38.046, "phase_angle": 157.213, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.007, "frame": { "rmsd": 0.007, "origin": [ 147.671, 299.485, 180.507 ], "x_axis": [ -0.194, 0.420, -0.887 ], "y_axis": [ -0.970, -0.217, 0.110 ], "z_axis": [ -0.146, 0.881, 0.449 ], "quaternion": [ 0.509, -0.379, 0.363, 0.682 ] } }, { "index": 1628, "index_chain": 102, "chain_name": "A", "nt_resnum": 103, "nt_name": "A", "nt_code": "A", "nt_id": "///A/103", "linked_nts": [ "///A/102", "///A/104" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": 47.998, "beta": 168.328, "gamma": -167.114, "delta": 79.668, "epsilon": -104.129, "zeta": -133.911, "epsilon_zeta": 29.783, "bb_type": "--", "chi": -174.526, "glyco_bond": "anti", "C5prime_xyz": [ -1.386, 8.487, 1.367 ], "P_xyz": [ -0.658, 10.924, 0.802 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 104.543, "theta": -169.102, "eta_prime": 94.955, "theta_prime": -164.156, "eta_base": 97.591, "theta_base": -129.044, "v0": 1.919, "v1": -25.101, "v2": 37.503, "v3": -37.484, "v4": 22.430, "amplitude": 38.997, "phase_angle": 15.907, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "6n", "suiteness": 0.279, "filter_rmsd": 0.041, "frame": { "rmsd": 0.012, "origin": [ 138.794, 287.849, 181.294 ], "x_axis": [ 0.310, 0.438, -0.844 ], "y_axis": [ 0.185, 0.843, 0.505 ], "z_axis": [ 0.933, -0.312, 0.180 ], "quaternion": [ 0.764, 0.268, 0.582, 0.083 ] } }, { "index": 1629, "index_chain": 103, "chain_name": "A", "nt_resnum": 104, "nt_name": "U", "nt_code": "U", "nt_id": "///A/104", "linked_nts": [ "///A/103", "///A/105" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": 114.620, "beta": -108.239, "gamma": 176.891, "delta": 81.583, "epsilon": -113.229, "zeta": -43.494, "epsilon_zeta": -69.736, "bb_type": "--", "chi": -165.888, "glyco_bond": "anti", "C5prime_xyz": [ -1.385, 8.659, 0.900 ], "P_xyz": [ 0.025, 9.277, -1.206 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.243, "theta": -101.289, "eta_prime": 173.622, "theta_prime": -104.300, "eta_base": -146.021, "theta_base": -62.227, "v0": 2.592, "v1": -24.856, "v2": 36.490, "v3": -35.898, "v4": 20.929, "amplitude": 37.718, "phase_angle": 14.660, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.111, "frame": { "rmsd": 0.015, "origin": [ 141.117, 286.854, 180.267 ], "x_axis": [ 0.243, 0.809, -0.536 ], "y_axis": [ 0.379, 0.429, 0.820 ], "z_axis": [ 0.893, -0.402, -0.202 ], "quaternion": [ 0.606, 0.504, 0.589, 0.177 ] } }, { "index": 1630, "index_chain": 104, "chain_name": "A", "nt_resnum": 105, "nt_name": "C", "nt_code": "C", "nt_id": "///A/105", "linked_nts": [ "///A/104", "///A/106" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -80.220, "beta": 179.342, "gamma": 57.805, "delta": 77.226, "epsilon": -129.077, "zeta": -91.792, "epsilon_zeta": -37.284, "bb_type": "--", "chi": -157.255, "glyco_bond": "anti", "C5prime_xyz": [ -1.575, 8.864, 0.339 ], "P_xyz": [ 0.980, 9.486, 0.454 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 149.123, "theta": -149.869, "eta_prime": -174.751, "theta_prime": -145.067, "eta_base": -104.243, "theta_base": -114.492, "v0": -0.708, "v1": -22.961, "v2": 36.726, "v3": -38.039, "v4": 24.430, "amplitude": 38.981, "phase_angle": 19.585, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.200, "filter_rmsd": 0.063, "frame": { "rmsd": 0.009, "origin": [ 145.987, 293.027, 180.569 ], "x_axis": [ -0.048, 0.600, 0.798 ], "y_axis": [ 0.091, -0.793, 0.602 ], "z_axis": [ 0.995, 0.102, -0.017 ], "quaternion": [ 0.188, 0.664, 0.261, 0.675 ] } }, { "index": 1631, "index_chain": 105, "chain_name": "A", "nt_resnum": 106, "nt_name": "C", "nt_code": "C", "nt_id": "///A/106", "linked_nts": [ "///A/105", "///A/107" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -56.449, "beta": 161.880, "gamma": 49.513, "delta": 77.679, "epsilon": -137.033, "zeta": -87.863, "epsilon_zeta": -49.171, "bb_type": "BI", "chi": -162.540, "glyco_bond": "anti", "C5prime_xyz": [ -1.265, 8.741, 0.696 ], "P_xyz": [ 1.335, 8.996, 0.704 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.120, "theta": -154.008, "eta_prime": 173.415, "theta_prime": -153.600, "eta_base": -146.995, "theta_base": -136.777, "v0": 4.231, "v1": -27.752, "v2": 39.502, "v3": -38.029, "v4": 21.298, "amplitude": 40.488, "phase_angle": 12.676, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.556, "filter_rmsd": 0.075, "frame": { "rmsd": 0.018, "origin": [ 149.904, 294.670, 181.571 ], "x_axis": [ -0.409, -0.022, 0.912 ], "y_axis": [ 0.114, -0.993, 0.027 ], "z_axis": [ 0.905, 0.115, 0.409 ], "quaternion": [ -0.041, 0.542, 0.042, 0.838 ] } }, { "index": 1632, "index_chain": 106, "chain_name": "A", "nt_resnum": 107, "nt_name": "G", "nt_code": "G", "nt_id": "///A/107", "linked_nts": [ "///A/106", "///A/108" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -79.857, "beta": 158.585, "gamma": 73.965, "delta": 77.353, "epsilon": -144.652, "zeta": -78.006, "epsilon_zeta": -66.646, "bb_type": "BI", "chi": -176.497, "glyco_bond": "anti", "C5prime_xyz": [ -1.166, 8.456, 1.426 ], "P_xyz": [ 1.356, 8.855, 0.856 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.722, "theta": -149.034, "eta_prime": 170.439, "theta_prime": -150.701, "eta_base": -157.957, "theta_base": -141.838, "v0": 6.220, "v1": -30.034, "v2": 41.265, "v3": -38.726, "v4": 20.461, "amplitude": 41.932, "phase_angle": 10.236, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.274, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 153.247, 296.546, 183.179 ], "x_axis": [ -0.515, -0.459, 0.724 ], "y_axis": [ 0.285, -0.888, -0.360 ], "z_axis": [ 0.808, 0.021, 0.588 ], "quaternion": [ -0.215, 0.443, -0.098, 0.865 ] } }, { "index": 1633, "index_chain": 107, "chain_name": "A", "nt_resnum": 108, "nt_name": "G", "nt_code": "G", "nt_id": "///A/108", "linked_nts": [ "///A/107", "///A/109" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -67.906, "beta": 179.947, "gamma": 59.400, "delta": 79.167, "epsilon": -147.270, "zeta": -63.411, "epsilon_zeta": -83.859, "bb_type": "BI", "chi": -168.074, "glyco_bond": "anti", "C5prime_xyz": [ -1.477, 8.705, 0.959 ], "P_xyz": [ 1.058, 9.222, 1.352 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.397, "theta": -138.050, "eta_prime": -178.897, "theta_prime": -137.508, "eta_base": -157.168, "theta_base": -106.983, "v0": 1.741, "v1": -24.918, "v2": 37.370, "v3": -37.315, "v4": 22.466, "amplitude": 38.889, "phase_angle": 16.065, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.882, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 154.708, 298.947, 185.981 ], "x_axis": [ -0.491, -0.796, 0.354 ], "y_axis": [ 0.546, -0.598, -0.587 ], "z_axis": [ 0.679, -0.095, 0.728 ], "quaternion": [ -0.400, 0.308, -0.203, 0.839 ] } }, { "index": 1634, "index_chain": 108, "chain_name": "A", "nt_resnum": 109, "nt_name": "A", "nt_code": "A", "nt_id": "///A/109", "linked_nts": [ "///A/108", "///A/110" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -76.791, "beta": 178.144, "gamma": 60.264, "delta": 75.971, "epsilon": -148.693, "zeta": -65.380, "epsilon_zeta": -83.313, "bb_type": "BI", "chi": -167.936, "glyco_bond": "anti", "C5prime_xyz": [ -1.593, 8.669, 0.929 ], "P_xyz": [ 0.902, 9.409, 1.107 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.032, "theta": -145.561, "eta_prime": 177.952, "theta_prime": -145.156, "eta_base": -133.083, "theta_base": -126.307, "v0": 1.902, "v1": -26.634, "v2": 39.864, "v3": -39.747, "v4": 23.819, "amplitude": 41.457, "phase_angle": 15.935, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.782, "filter_rmsd": 0.041, "frame": { "rmsd": 0.014, "origin": [ 155.401, 297.979, 189.914 ], "x_axis": [ -0.146, -0.975, -0.166 ], "y_axis": [ 0.742, 0.003, -0.670 ], "z_axis": [ 0.654, -0.221, 0.724 ], "quaternion": [ 0.629, -0.179, 0.326, -0.683 ] } }, { "index": 1635, "index_chain": 109, "chain_name": "A", "nt_resnum": 110, "nt_name": "G", "nt_code": "G", "nt_id": "///A/110", "linked_nts": [ "///A/109", "///A/111" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -77.884, "beta": 164.296, "gamma": 85.151, "delta": 73.942, "epsilon": -146.243, "zeta": -77.508, "epsilon_zeta": -68.735, "bb_type": "BI", "chi": -171.611, "glyco_bond": "anti", "C5prime_xyz": [ -1.902, 8.834, 1.091 ], "P_xyz": [ 0.426, 9.971, 0.749 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.345, "theta": -156.281, "eta_prime": -169.385, "theta_prime": -154.796, "eta_base": -135.482, "theta_base": -115.713, "v0": -5.108, "v1": -20.217, "v2": 36.458, "v3": -40.360, "v4": 28.679, "amplitude": 40.450, "phase_angle": 25.671, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.015, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 155.287, 296.097, 193.514 ], "x_axis": [ 0.197, -0.873, -0.447 ], "y_axis": [ 0.787, 0.412, -0.459 ], "z_axis": [ 0.585, -0.262, 0.768 ], "quaternion": [ 0.771, -0.064, 0.335, -0.538 ] } }, { "index": 1636, "index_chain": 110, "chain_name": "A", "nt_resnum": 111, "nt_name": "A", "nt_code": "A", "nt_id": "///A/111", "linked_nts": [ "///A/110", "///A/112" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -62.272, "beta": 173.527, "gamma": 49.537, "delta": 79.125, "epsilon": -139.855, "zeta": -71.900, "epsilon_zeta": -67.955, "bb_type": "BI", "chi": -159.201, "glyco_bond": "anti", "C5prime_xyz": [ -1.234, 8.609, 0.466 ], "P_xyz": [ 1.364, 8.892, 0.509 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.414, "theta": -140.088, "eta_prime": 177.670, "theta_prime": -138.078, "eta_base": -130.826, "theta_base": -122.700, "v0": 6.059, "v1": -28.832, "v2": 39.562, "v3": -37.047, "v4": 19.533, "amplitude": 40.184, "phase_angle": 10.101, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.813, "filter_rmsd": 0.040, "frame": { "rmsd": 0.009, "origin": [ 156.775, 293.723, 195.855 ], "x_axis": [ 0.673, -0.397, -0.624 ], "y_axis": [ 0.513, 0.858, 0.007 ], "z_axis": [ 0.533, -0.325, 0.782 ], "quaternion": [ 0.910, 0.091, 0.318, -0.250 ] } }, { "index": 1637, "index_chain": 111, "chain_name": "A", "nt_resnum": 112, "nt_name": "U", "nt_code": "U", "nt_id": "///A/112", "linked_nts": [ "///A/111", "///A/113" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end", "alpha": -69.603, "beta": 167.552, "gamma": 74.633, "delta": 80.439, "epsilon": -127.981, "zeta": -50.378, "epsilon_zeta": -77.603, "bb_type": "--", "chi": -156.961, "glyco_bond": "anti", "C5prime_xyz": [ -1.886, 8.858, 0.241 ], "P_xyz": [ 0.506, 9.750, -0.258 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 179.861, "theta": -111.800, "eta_prime": -167.560, "theta_prime": -107.206, "eta_base": -141.772, "theta_base": -41.165, "v0": -6.422, "v1": -16.933, "v2": 32.374, "v3": -36.996, "v4": 27.447, "amplitude": 36.812, "phase_angle": 28.425, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.336, "filter_rmsd": 0.102, "frame": { "rmsd": 0.012, "origin": [ 158.322, 290.635, 197.372 ], "x_axis": [ 0.718, 0.064, -0.693 ], "y_axis": [ 0.296, 0.873, 0.388 ], "z_axis": [ 0.629, -0.484, 0.608 ], "quaternion": [ 0.894, 0.243, 0.370, -0.065 ] } }, { "index": 1638, "index_chain": 112, "chain_name": "A", "nt_resnum": 113, "nt_name": "C", "nt_code": "C", "nt_id": "///A/113", "linked_nts": [ "///A/112", "///A/114" ], "nt_type": "RNA", "dbn": ".", "summary": "syn", "alpha": -75.388, "beta": 160.673, "gamma": 74.984, "delta": 77.367, "epsilon": -137.450, "zeta": 135.901, "epsilon_zeta": 86.649, "bb_type": "--", "chi": 10.843, "glyco_bond": "syn", "C5prime_xyz": [ -5.612, 4.560, -1.012 ], "P_xyz": [ -6.167, 2.034, -0.677 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.691, "theta": 88.863, "eta_prime": -163.489, "theta_prime": 96.822, "eta_base": -78.892, "theta_base": 111.546, "v0": -2.396, "v1": -21.890, "v2": 36.478, "v3": -38.867, "v4": 26.014, "amplitude": 39.346, "phase_angle": 22.013, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.211, "filter_rmsd": 0.069, "frame": { "rmsd": 0.011, "origin": [ 164.645, 296.688, 199.772 ], "x_axis": [ 0.586, -0.141, -0.798 ], "y_axis": [ -0.248, -0.969, -0.012 ], "z_axis": [ -0.771, 0.205, -0.603 ], "quaternion": [ -0.061, 0.888, -0.109, -0.442 ] } }, { "index": 1639, "index_chain": 113, "chain_name": "A", "nt_resnum": 114, "nt_name": "U", "nt_code": "U", "nt_id": "///A/114", "linked_nts": [ "///A/113", "///A/115" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -0.275, "beta": 142.362, "gamma": -17.105, "delta": 71.938, "epsilon": 80.865, "zeta": 79.972, "epsilon_zeta": 0.893, "bb_type": "--", "chi": -168.329, "glyco_bond": "anti", "C5prime_xyz": [ -1.199, 8.537, 1.046 ], "P_xyz": [ 0.832, 8.762, 2.684 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -155.107, "theta": -97.282, "eta_prime": -160.543, "theta_prime": -108.913, "eta_base": -176.100, "theta_base": -75.153, "v0": 7.716, "v1": -29.903, "v2": 40.106, "v3": -36.510, "v4": 18.254, "amplitude": 40.491, "phase_angle": 7.908, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.110, "frame": { "rmsd": 0.017, "origin": [ 162.036, 281.473, 206.529 ], "x_axis": [ 0.074, -0.029, -0.997 ], "y_axis": [ -0.054, 0.998, -0.033 ], "z_axis": [ 0.996, 0.056, 0.072 ], "quaternion": [ 0.732, -0.030, 0.681, 0.008 ] } }, { "index": 1640, "index_chain": 114, "chain_name": "A", "nt_resnum": 115, "nt_name": "C", "nt_code": "C", "nt_id": "///A/115", "linked_nts": [ "///A/114", "///A/116" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": 66.589, "beta": -155.331, "gamma": 179.761, "delta": 80.045, "epsilon": -149.968, "zeta": -69.448, "epsilon_zeta": -80.519, "bb_type": "BI", "chi": -165.512, "glyco_bond": "anti", "C5prime_xyz": [ -1.241, 8.700, 0.894 ], "P_xyz": [ 0.291, 10.215, -0.561 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 135.372, "theta": -139.941, "eta_prime": 170.362, "theta_prime": -145.756, "eta_base": -132.467, "theta_base": -116.785, "v0": 2.890, "v1": -25.613, "v2": 37.425, "v3": -36.671, "v4": 21.274, "amplitude": 38.628, "phase_angle": 14.339, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.070, "frame": { "rmsd": 0.016, "origin": [ 166.364, 281.111, 204.886 ], "x_axis": [ -0.019, 0.630, -0.776 ], "y_axis": [ -0.086, 0.772, 0.629 ], "z_axis": [ 0.996, 0.079, 0.040 ], "quaternion": [ 0.669, 0.205, 0.662, 0.268 ] } }, { "index": 1641, "index_chain": 115, "chain_name": "A", "nt_resnum": 116, "nt_name": "U", "nt_code": "U", "nt_id": "///A/116", "linked_nts": [ "///A/115", "///A/117" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 172.266, "beta": -165.140, "gamma": 165.454, "delta": 81.669, "epsilon": -115.587, "zeta": -67.745, "epsilon_zeta": -47.842, "bb_type": "--", "chi": -173.448, "glyco_bond": "anti", "C5prime_xyz": [ -1.494, 8.588, 1.309 ], "P_xyz": [ 0.356, 10.126, 0.334 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.177, "theta": -138.321, "eta_prime": -174.632, "theta_prime": -134.258, "eta_base": -129.621, "theta_base": -79.588, "v0": 0.099, "v1": -22.829, "v2": 35.694, "v3": -36.534, "v4": 22.999, "amplitude": 37.624, "phase_angle": 18.429, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.496, "filter_rmsd": 0.106, "frame": { "rmsd": 0.017, "origin": [ 169.868, 281.890, 202.118 ], "x_axis": [ -0.261, 0.934, -0.243 ], "y_axis": [ 0.018, 0.257, 0.966 ], "z_axis": [ 0.965, 0.247, -0.084 ], "quaternion": [ 0.478, 0.376, 0.633, 0.480 ] } }, { "index": 1642, "index_chain": 116, "chain_name": "A", "nt_resnum": 117, "nt_name": "G", "nt_code": "G", "nt_id": "///A/117", "linked_nts": [ "///A/116", "///A/118" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -73.622, "beta": 160.519, "gamma": 64.720, "delta": 82.112, "epsilon": -111.465, "zeta": -90.464, "epsilon_zeta": -21.002, "bb_type": "--", "chi": -154.004, "glyco_bond": "anti", "C5prime_xyz": [ -1.588, 8.802, 0.117 ], "P_xyz": [ 0.908, 9.301, -0.423 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.455, "theta": -136.617, "eta_prime": -175.273, "theta_prime": -135.373, "eta_base": -106.952, "theta_base": -149.266, "v0": -0.750, "v1": -21.986, "v2": 35.073, "v3": -36.471, "v4": 23.528, "amplitude": 37.266, "phase_angle": 19.754, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.370, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 171.739, 285.835, 202.030 ], "x_axis": [ -0.278, 0.716, 0.640 ], "y_axis": [ 0.431, -0.502, 0.750 ], "z_axis": [ 0.858, 0.484, -0.169 ], "quaternion": [ 0.112, 0.590, 0.486, 0.635 ] } }, { "index": 1643, "index_chain": 117, "chain_name": "A", "nt_resnum": 118, "nt_name": "A", "nt_code": "A", "nt_id": "///A/118", "linked_nts": [ "///A/117", "///A/119" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix", "alpha": -58.541, "beta": -150.724, "gamma": 8.590, "delta": 79.905, "epsilon": -156.024, "zeta": 17.882, "epsilon_zeta": 186.094, "bb_type": "--", "chi": -82.837, "glyco_bond": "anti", "C5prime_xyz": [ -3.138, 7.038, -3.077 ], "P_xyz": [ -1.890, 8.765, -4.599 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.550, "theta": -57.911, "eta_prime": 153.902, "theta_prime": -61.704, "eta_base": 147.384, "theta_base": -53.769, "v0": -5.601, "v1": -17.620, "v2": 32.781, "v3": -36.929, "v4": 26.816, "amplitude": 36.838, "phase_angle": 27.144, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.044, "frame": { "rmsd": 0.019, "origin": [ 177.731, 288.866, 199.296 ], "x_axis": [ -0.549, 0.639, 0.539 ], "y_axis": [ 0.441, -0.326, 0.836 ], "z_axis": [ 0.710, 0.697, -0.103 ], "quaternion": [ 0.074, 0.469, 0.576, 0.665 ] } }, { "index": 1644, "index_chain": 118, "chain_name": "A", "nt_resnum": 119, "nt_name": "A", "nt_code": "A", "nt_id": "///A/119", "linked_nts": [ "///A/118", "///A/120" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": 109.077, "beta": 166.622, "gamma": 174.818, "delta": 145.085, "epsilon": -81.921, "zeta": 94.444, "epsilon_zeta": 183.635, "bb_type": "--", "chi": -124.278, "glyco_bond": "anti", "C5prime_xyz": [ -2.505, 8.529, -1.043 ], "P_xyz": [ -1.378, 9.891, -2.981 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.723, "theta": 83.295, "eta_prime": -161.483, "theta_prime": 83.809, "eta_base": -150.162, "theta_base": 51.544, "v0": -27.034, "v1": 39.415, "v2": -36.040, "v3": 21.497, "v4": 3.202, "amplitude": 39.290, "phase_angle": 156.533, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.019, "origin": [ 174.066, 288.269, 202.845 ], "x_axis": [ -0.008, -0.535, -0.845 ], "y_axis": [ 0.675, -0.626, 0.390 ], "z_axis": [ -0.738, -0.567, 0.367 ], "quaternion": [ -0.428, -0.559, -0.062, 0.707 ] } }, { "index": 1645, "index_chain": 119, "chain_name": "A", "nt_resnum": 120, "nt_name": "U", "nt_code": "U", "nt_id": "///A/120", "linked_nts": [ "///A/119", "///A/121" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": 147.089, "beta": -127.555, "gamma": 54.926, "delta": 144.771, "epsilon": -117.509, "zeta": 90.625, "epsilon_zeta": 151.867, "bb_type": "--", "chi": -156.982, "glyco_bond": "anti", "C5prime_xyz": [ -1.958, 8.672, 0.671 ], "P_xyz": [ -1.050, 8.928, 3.108 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 120.573, "theta": 116.502, "eta_prime": 116.523, "theta_prime": 77.007, "eta_base": 90.025, "theta_base": -3.998, "v0": -23.468, "v1": 36.218, "v2": -34.363, "v3": 21.825, "v4": 0.820, "amplitude": 36.589, "phase_angle": 159.910, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.100, "frame": { "rmsd": 0.017, "origin": [ 181.556, 291.008, 203.099 ], "x_axis": [ 0.565, -0.761, -0.319 ], "y_axis": [ 0.046, -0.358, 0.933 ], "z_axis": [ -0.824, -0.542, -0.167 ], "quaternion": [ 0.510, 0.723, -0.247, -0.395 ] } }, { "index": 1646, "index_chain": 120, "chain_name": "A", "nt_resnum": 121, "nt_name": "G", "nt_code": "G", "nt_id": "///A/121", "linked_nts": [ "///A/120", "///A/122" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 59.432, "beta": 167.972, "gamma": 64.443, "delta": 81.780, "epsilon": -152.339, "zeta": -71.984, "epsilon_zeta": -80.355, "bb_type": "BI", "chi": -178.588, "glyco_bond": "anti", "C5prime_xyz": [ -1.301, 8.468, 1.583 ], "P_xyz": [ 1.292, 8.590, 1.939 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -23.449, "theta": -143.023, "eta_prime": -15.156, "theta_prime": -141.533, "eta_base": 68.829, "theta_base": -119.374, "v0": 2.573, "v1": -25.102, "v2": 36.910, "v3": -36.311, "v4": 21.287, "amplitude": 38.169, "phase_angle": 14.757, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "6d", "suiteness": 0.726, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 174.219, 289.700, 219.502 ], "x_axis": [ -0.768, -0.270, -0.581 ], "y_axis": [ 0.364, 0.563, -0.742 ], "z_axis": [ 0.527, -0.781, -0.334 ], "quaternion": [ 0.340, 0.029, 0.816, -0.467 ] } }, { "index": 1647, "index_chain": 121, "chain_name": "A", "nt_resnum": 122, "nt_name": "G", "nt_code": "G", "nt_id": "///A/122", "linked_nts": [ "///A/121", "///A/123" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -84.029, "beta": -162.271, "gamma": 58.446, "delta": 79.543, "epsilon": -158.311, "zeta": -88.607, "epsilon_zeta": -69.704, "bb_type": "BI", "chi": -153.406, "glyco_bond": "anti", "C5prime_xyz": [ -0.987, 8.724, 0.167 ], "P_xyz": [ 1.607, 8.806, 0.527 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.058, "theta": -129.284, "eta_prime": 177.195, "theta_prime": -132.705, "eta_base": -147.884, "theta_base": -109.221, "v0": 5.002, "v1": -27.562, "v2": 38.694, "v3": -36.643, "v4": 19.993, "amplitude": 39.476, "phase_angle": 11.428, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.563, "filter_rmsd": 0.022, "frame": { "rmsd": 0.022, "origin": [ 175.037, 286.013, 219.546 ], "x_axis": [ -0.401, 0.142, -0.905 ], "y_axis": [ 0.796, 0.543, -0.267 ], "z_axis": [ 0.453, -0.828, -0.331 ], "quaternion": [ 0.450, 0.311, 0.754, -0.363 ] } }, { "index": 1648, "index_chain": 122, "chain_name": "A", "nt_resnum": 123, "nt_name": "G", "nt_code": "G", "nt_id": "///A/123", "linked_nts": [ "///A/122", "///A/124" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": 151.075, "beta": -137.922, "gamma": 175.682, "delta": 80.809, "epsilon": -138.768, "zeta": -96.541, "epsilon_zeta": -42.227, "bb_type": "BI", "chi": 179.496, "glyco_bond": "anti", "C5prime_xyz": [ -1.245, 8.315, 1.765 ], "P_xyz": [ 0.673, 9.617, 0.597 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.356, "theta": -134.600, "eta_prime": -173.453, "theta_prime": -139.615, "eta_base": -127.629, "theta_base": -97.796, "v0": 5.212, "v1": -26.732, "v2": 37.152, "v3": -35.102, "v4": 18.863, "amplitude": 37.835, "phase_angle": 10.901, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.528, "filter_rmsd": 0.022, "frame": { "rmsd": 0.022, "origin": [ 174.818, 282.791, 217.072 ], "x_axis": [ -0.008, 0.492, -0.871 ], "y_axis": [ 0.907, 0.370, 0.201 ], "z_axis": [ 0.421, -0.788, -0.449 ], "quaternion": [ 0.478, 0.518, 0.676, -0.217 ] } }, { "index": 1649, "index_chain": 123, "chain_name": "A", "nt_resnum": 124, "nt_name": "G", "nt_code": "G", "nt_id": "///A/124", "linked_nts": [ "///A/123", "///A/125" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 165.680, "beta": -131.909, "gamma": 156.854, "delta": 84.975, "epsilon": -93.015, "zeta": -142.411, "epsilon_zeta": 49.396, "bb_type": "--", "chi": 177.739, "glyco_bond": "anti", "C5prime_xyz": [ -1.229, 8.280, 1.854 ], "P_xyz": [ 1.101, 8.901, 0.827 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.245, "theta": -145.355, "eta_prime": -170.096, "theta_prime": 174.401, "eta_base": -110.361, "theta_base": 122.291, "v0": 5.636, "v1": -26.083, "v2": 35.482, "v3": -33.137, "v4": 17.414, "amplitude": 36.005, "phase_angle": 9.784, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.066, "filter_rmsd": 0.025, "frame": { "rmsd": 0.025, "origin": [ 176.071, 281.087, 212.893 ], "x_axis": [ 0.684, 0.624, -0.379 ], "y_axis": [ 0.586, -0.158, 0.795 ], "z_axis": [ 0.436, -0.765, -0.473 ], "quaternion": [ 0.513, 0.761, 0.397, 0.019 ] } }, { "index": 1650, "index_chain": 124, "chain_name": "A", "nt_resnum": 125, "nt_name": "G", "nt_code": "G", "nt_id": "///A/125", "linked_nts": [ "///A/124", "///A/126" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": 108.810, "beta": -142.106, "gamma": 95.405, "delta": 149.514, "epsilon": -102.758, "zeta": -95.455, "epsilon_zeta": -7.303, "bb_type": "--", "chi": -99.930, "glyco_bond": "anti", "C5prime_xyz": [ -2.318, 8.160, -2.083 ], "P_xyz": [ 0.276, 8.566, -2.206 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 53.367, "theta": -32.104, "eta_prime": 90.640, "theta_prime": -90.165, "eta_base": 58.023, "theta_base": -165.215, "v0": -24.729, "v1": 39.653, "v2": -38.643, "v3": 25.213, "v4": -0.492, "amplitude": 40.635, "phase_angle": 161.985, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 173.609, 270.151, 222.261 ], "x_axis": [ 0.212, 0.589, 0.780 ], "y_axis": [ 0.520, 0.607, -0.600 ], "z_axis": [ -0.827, 0.533, -0.177 ], "quaternion": [ 0.641, -0.442, -0.627, 0.027 ] } }, { "index": 1651, "index_chain": 125, "chain_name": "A", "nt_resnum": 126, "nt_name": "A", "nt_code": "A", "nt_id": "///A/126", "linked_nts": [ "///A/125", "///A/127" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BI", "alpha": 73.169, "beta": 165.099, "gamma": 49.936, "delta": 76.899, "epsilon": -157.375, "zeta": -80.517, "epsilon_zeta": -76.858, "bb_type": "BI", "chi": 57.069, "glyco_bond": "syn", "C5prime_xyz": [ -5.668, 5.093, 1.627 ], "P_xyz": [ -6.669, 2.987, 2.799 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -86.735, "theta": -165.365, "eta_prime": -35.966, "theta_prime": -157.527, "eta_base": 51.478, "theta_base": 176.952, "v0": -19.647, "v1": -4.896, "v2": 25.690, "v3": -37.960, "v4": 36.518, "amplitude": 38.737, "phase_angle": 48.456, "puckering": "C4'-exo", "sugar_class": "--", "bin": "23p", "cluster": "8d", "suiteness": 0.438, "filter_rmsd": 0.048, "frame": { "rmsd": 0.035, "origin": [ 172.366, 272.502, 205.648 ], "x_axis": [ -0.027, 0.349, -0.937 ], "y_axis": [ 0.205, 0.919, 0.337 ], "z_axis": [ 0.978, -0.183, -0.097 ], "quaternion": [ 0.670, 0.194, 0.715, 0.054 ] } }, { "index": 1652, "index_chain": 126, "chain_name": "A", "nt_resnum": 127, "nt_name": "A", "nt_code": "A", "nt_id": "///A/127", "linked_nts": [ "///A/126", "///A/128" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": -74.581, "beta": 164.042, "gamma": 70.545, "delta": 88.666, "epsilon": -111.461, "zeta": 84.200, "epsilon_zeta": 164.339, "bb_type": "--", "chi": -115.705, "glyco_bond": "anti", "C5prime_xyz": [ -1.613, 8.171, -1.882 ], "P_xyz": [ 0.647, 7.718, -3.125 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -176.859, "theta": 62.478, "eta_prime": -164.243, "theta_prime": 42.285, "eta_base": 173.370, "theta_base": 44.212, "v0": 4.098, "v1": -23.196, "v2": 32.396, "v3": -30.878, "v4": 17.025, "amplitude": 33.081, "phase_angle": 11.679, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.436, "filter_rmsd": 0.045, "frame": { "rmsd": 0.015, "origin": [ 169.613, 274.256, 205.505 ], "x_axis": [ -0.006, -0.970, 0.243 ], "y_axis": [ -0.232, 0.238, 0.943 ], "z_axis": [ -0.973, -0.050, -0.227 ], "quaternion": [ 0.501, 0.496, -0.606, -0.368 ] } }, { "index": 1653, "index_chain": 127, "chain_name": "A", "nt_resnum": 128, "nt_name": "C", "nt_code": "C", "nt_id": "///A/128", "linked_nts": [ "///A/127", "///A/129" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": 112.653, "beta": 174.873, "gamma": 157.393, "delta": 82.165, "epsilon": -152.248, "zeta": -74.986, "epsilon_zeta": -77.262, "bb_type": "BI", "chi": -150.482, "glyco_bond": "anti", "C5prime_xyz": [ -1.451, 8.809, -0.050 ], "P_xyz": [ -0.331, 10.083, -2.052 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 132.091, "theta": -175.690, "eta_prime": 153.508, "theta_prime": -172.894, "eta_base": -174.271, "theta_base": -146.099, "v0": 1.747, "v1": -23.965, "v2": 35.771, "v3": -35.680, "v4": 21.481, "amplitude": 37.201, "phase_angle": 15.942, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.066, "frame": { "rmsd": 0.011, "origin": [ 174.914, 282.426, 216.193 ], "x_axis": [ -0.107, 0.680, -0.726 ], "y_axis": [ -0.964, -0.251, -0.092 ], "z_axis": [ -0.244, 0.689, 0.682 ], "quaternion": [ 0.575, -0.340, 0.209, 0.714 ] } }, { "index": 1654, "index_chain": 128, "chain_name": "A", "nt_resnum": 129, "nt_name": "C", "nt_code": "C", "nt_id": "///A/129", "linked_nts": [ "///A/128", "///A/130" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -78.508, "beta": 171.873, "gamma": 68.367, "delta": 82.030, "epsilon": -149.043, "zeta": -75.475, "epsilon_zeta": -73.567, "bb_type": "BI", "chi": -162.090, "glyco_bond": "anti", "C5prime_xyz": [ -1.300, 8.771, 0.654 ], "P_xyz": [ 1.289, 9.155, 0.474 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.034, "theta": -146.970, "eta_prime": -179.748, "theta_prime": -147.875, "eta_base": -143.622, "theta_base": -123.675, "v0": 1.695, "v1": -24.039, "v2": 35.959, "v3": -35.869, "v4": 21.570, "amplitude": 37.405, "phase_angle": 15.986, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.565, "filter_rmsd": 0.069, "frame": { "rmsd": 0.014, "origin": [ 174.528, 286.089, 218.422 ], "x_axis": [ -0.504, 0.260, -0.824 ], "y_axis": [ -0.767, -0.574, 0.288 ], "z_axis": [ -0.398, 0.776, 0.489 ], "quaternion": [ 0.320, -0.381, 0.332, 0.801 ] } }, { "index": 1655, "index_chain": 129, "chain_name": "A", "nt_resnum": 130, "nt_name": "C", "nt_code": "C", "nt_id": "///A/130", "linked_nts": [ "///A/129", "///A/131" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -72.158, "beta": 169.951, "gamma": 62.448, "delta": 78.555, "epsilon": -138.615, "zeta": -85.817, "epsilon_zeta": -52.798, "bb_type": "BI", "chi": -164.718, "glyco_bond": "anti", "C5prime_xyz": [ -1.331, 8.730, 0.799 ], "P_xyz": [ 1.259, 9.094, 0.697 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.739, "theta": -121.281, "eta_prime": 179.230, "theta_prime": -136.197, "eta_base": -141.285, "theta_base": -160.514, "v0": 3.314, "v1": -27.117, "v2": 39.430, "v3": -38.357, "v4": 22.046, "amplitude": 40.615, "phase_angle": 13.873, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.825, "filter_rmsd": 0.073, "frame": { "rmsd": 0.017, "origin": [ 173.574, 289.869, 219.260 ], "x_axis": [ -0.794, -0.157, -0.587 ], "y_axis": [ -0.389, -0.611, 0.689 ], "z_axis": [ -0.467, 0.776, 0.424 ], "quaternion": [ 0.069, -0.313, 0.436, 0.841 ] } }, { "index": 1656, "index_chain": 130, "chain_name": "A", "nt_resnum": 131, "nt_name": "A", "nt_code": "A", "nt_id": "///A/131", "linked_nts": [ "///A/130", "///A/132" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 99.418, "beta": -134.649, "gamma": -100.626, "delta": 76.423, "epsilon": -127.326, "zeta": -54.044, "epsilon_zeta": -73.282, "bb_type": "--", "chi": -176.540, "glyco_bond": "anti", "C5prime_xyz": [ -2.090, 8.742, 1.292 ], "P_xyz": [ -2.656, 11.262, 0.800 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -154.440, "theta": 175.252, "eta_prime": -154.587, "theta_prime": -177.735, "eta_base": -166.023, "theta_base": -140.841, "v0": -8.544, "v1": -15.840, "v2": 32.705, "v3": -38.652, "v4": 29.787, "amplitude": 38.266, "phase_angle": 31.276, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.010, "origin": [ 174.825, 295.231, 218.315 ], "x_axis": [ -0.785, 0.031, -0.619 ], "y_axis": [ -0.526, -0.561, 0.639 ], "z_axis": [ -0.328, 0.827, 0.457 ], "quaternion": [ 0.166, -0.283, 0.438, 0.837 ] } }, { "index": 1657, "index_chain": 131, "chain_name": "A", "nt_resnum": 132, "nt_name": "C", "nt_code": "C", "nt_id": "///A/132", "linked_nts": [ "///A/131", "///A/133" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -121.413, "beta": 121.482, "gamma": 135.265, "delta": 79.159, "epsilon": -125.801, "zeta": -66.632, "epsilon_zeta": -59.169, "bb_type": "--", "chi": -175.325, "glyco_bond": "anti", "C5prime_xyz": [ -1.250, 8.599, 1.414 ], "P_xyz": [ -0.045, 10.228, -0.228 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.832, "theta": -154.443, "eta_prime": 177.394, "theta_prime": -148.508, "eta_base": -138.369, "theta_base": -101.451, "v0": 1.412, "v1": -24.433, "v2": 36.972, "v3": -37.107, "v4": 22.488, "amplitude": 38.564, "phase_angle": 16.520, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.070, "frame": { "rmsd": 0.012, "origin": [ 173.769, 298.773, 217.841 ], "x_axis": [ -0.972, -0.170, -0.165 ], "y_axis": [ -0.093, -0.365, 0.926 ], "z_axis": [ -0.218, 0.915, 0.339 ], "quaternion": [ -0.024, -0.117, 0.563, 0.818 ] } }, { "index": 1658, "index_chain": 132, "chain_name": "A", "nt_resnum": 133, "nt_name": "C", "nt_code": "C", "nt_id": "///A/133", "linked_nts": [ "///A/132", "///A/134" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -68.314, "beta": 172.313, "gamma": 57.040, "delta": 80.924, "epsilon": -148.458, "zeta": -73.206, "epsilon_zeta": -75.252, "bb_type": "BI", "chi": -155.593, "glyco_bond": "anti", "C5prime_xyz": [ -1.433, 8.824, 0.260 ], "P_xyz": [ 1.133, 9.348, 0.247 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.700, "theta": -146.547, "eta_prime": -176.803, "theta_prime": -148.808, "eta_base": -113.590, "theta_base": -139.356, "v0": 0.242, "v1": -22.448, "v2": 34.848, "v3": -35.664, "v4": 22.349, "amplitude": 36.689, "phase_angle": 18.229, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.696, "filter_rmsd": 0.064, "frame": { "rmsd": 0.008, "origin": [ 170.209, 301.137, 218.356 ], "x_axis": [ -0.670, -0.503, 0.546 ], "y_axis": [ 0.621, 0.022, 0.783 ], "z_axis": [ -0.406, 0.864, 0.298 ], "quaternion": [ -0.403, 0.050, 0.590, 0.698 ] } }, { "index": 1659, "index_chain": 133, "chain_name": "A", "nt_resnum": 134, "nt_name": "U", "nt_code": "U", "nt_id": "///A/134", "linked_nts": [ "///A/133", "///A/135" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -68.464, "beta": 171.156, "gamma": 53.095, "delta": 73.130, "epsilon": -134.544, "zeta": -81.540, "epsilon_zeta": -53.004, "bb_type": "BI", "chi": -154.151, "glyco_bond": "anti", "C5prime_xyz": [ -1.848, 8.851, 0.126 ], "P_xyz": [ 0.572, 9.803, -0.088 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.181, "theta": -153.718, "eta_prime": 170.605, "theta_prime": -153.602, "eta_base": -166.969, "theta_base": -129.422, "v0": -1.047, "v1": -24.328, "v2": 39.185, "v3": -40.810, "v4": 26.335, "amplitude": 41.696, "phase_angle": 19.987, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.814, "filter_rmsd": 0.102, "frame": { "rmsd": 0.008, "origin": [ 167.858, 303.662, 217.956 ], "x_axis": [ -0.309, -0.610, 0.729 ], "y_axis": [ 0.746, 0.320, 0.584 ], "z_axis": [ -0.590, 0.725, 0.356 ], "quaternion": [ 0.585, -0.060, -0.564, -0.580 ] } }, { "index": 1660, "index_chain": 134, "chain_name": "A", "nt_resnum": 135, "nt_name": "A", "nt_code": "A", "nt_id": "///A/135", "linked_nts": [ "///A/134", "///A/136" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -77.517, "beta": 151.207, "gamma": 73.957, "delta": 76.830, "epsilon": -148.184, "zeta": -72.003, "epsilon_zeta": -76.181, "bb_type": "BI", "chi": -163.008, "glyco_bond": "anti", "C5prime_xyz": [ -1.651, 8.711, 0.636 ], "P_xyz": [ 0.673, 9.364, -0.363 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.477, "theta": -145.629, "eta_prime": 168.589, "theta_prime": -149.357, "eta_base": -153.097, "theta_base": -116.419, "v0": 1.579, "v1": -25.880, "v2": 39.007, "v3": -39.125, "v4": 23.591, "amplitude": 40.655, "phase_angle": 16.366, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.251, "filter_rmsd": 0.036, "frame": { "rmsd": 0.013, "origin": [ 165.360, 304.576, 219.032 ], "x_axis": [ 0.240, -0.590, 0.771 ], "y_axis": [ 0.650, 0.688, 0.324 ], "z_axis": [ -0.721, 0.423, 0.549 ], "quaternion": [ 0.787, -0.031, -0.474, -0.394 ] } }, { "index": 1661, "index_chain": 135, "chain_name": "A", "nt_resnum": 136, "nt_name": "G", "nt_code": "G", "nt_id": "///A/136", "linked_nts": [ "///A/135", "///A/137" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -67.720, "beta": 174.886, "gamma": 55.127, "delta": 78.678, "epsilon": -127.866, "zeta": -66.971, "epsilon_zeta": -60.895, "bb_type": "BI", "chi": -168.817, "glyco_bond": "anti", "C5prime_xyz": [ -1.294, 8.616, 1.013 ], "P_xyz": [ 1.301, 8.965, 1.247 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.013, "theta": -137.783, "eta_prime": 179.725, "theta_prime": -143.168, "eta_base": -131.211, "theta_base": -135.450, "v0": 5.159, "v1": -27.902, "v2": 38.861, "v3": -36.918, "v4": 19.973, "amplitude": 39.624, "phase_angle": 11.269, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.925, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 162.939, 304.064, 222.107 ], "x_axis": [ 0.769, -0.091, 0.633 ], "y_axis": [ 0.301, 0.925, -0.232 ], "z_axis": [ -0.564, 0.368, 0.739 ], "quaternion": [ 0.926, -0.162, -0.323, -0.106 ] } }, { "index": 1662, "index_chain": 136, "chain_name": "A", "nt_resnum": 137, "nt_name": "G", "nt_code": "G", "nt_id": "///A/137", "linked_nts": [ "///A/136", "///A/138" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -111.604, "beta": 126.722, "gamma": 126.306, "delta": 82.551, "epsilon": -152.310, "zeta": -64.940, "epsilon_zeta": -87.370, "bb_type": "BI", "chi": -179.203, "glyco_bond": "anti", "C5prime_xyz": [ -1.274, 8.394, 1.652 ], "P_xyz": [ 0.223, 9.896, 0.096 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.925, "theta": -135.524, "eta_prime": -178.722, "theta_prime": -142.513, "eta_base": -152.699, "theta_base": -80.675, "v0": 5.309, "v1": -26.794, "v2": 36.779, "v3": -34.683, "v4": 18.585, "amplitude": 37.417, "phase_angle": 10.590, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 161.090, 302.806, 224.687 ], "x_axis": [ 0.874, 0.178, 0.453 ], "y_axis": [ -0.066, 0.966, -0.251 ], "z_axis": [ -0.482, 0.189, 0.855 ], "quaternion": [ 0.961, -0.115, -0.243, 0.063 ] } }, { "index": 1663, "index_chain": 137, "chain_name": "A", "nt_resnum": 138, "nt_name": "A", "nt_code": "A", "nt_id": "///A/138", "linked_nts": [ "///A/137", "///A/139" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -155.058, "beta": -143.431, "gamma": 93.263, "delta": 77.704, "epsilon": -166.831, "zeta": -90.396, "epsilon_zeta": -76.435, "bb_type": "BI", "chi": -178.339, "glyco_bond": "anti", "C5prime_xyz": [ -1.044, 8.280, 1.525 ], "P_xyz": [ 1.572, 8.058, 1.421 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 127.316, "theta": -145.331, "eta_prime": 157.970, "theta_prime": 170.187, "eta_base": -107.492, "theta_base": -132.798, "v0": 9.260, "v1": -32.250, "v2": 41.978, "v3": -37.605, "v4": 17.848, "amplitude": 42.222, "phase_angle": 6.159, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.038, "frame": { "rmsd": 0.012, "origin": [ 162.190, 305.101, 228.247 ], "x_axis": [ 0.359, 0.898, -0.254 ], "y_axis": [ -0.868, 0.221, -0.445 ], "z_axis": [ -0.343, 0.381, 0.859 ], "quaternion": [ 0.781, -0.264, -0.029, 0.565 ] } }, { "index": 1664, "index_chain": 138, "chain_name": "A", "nt_resnum": 139, "nt_name": "U", "nt_code": "U", "nt_id": "///A/139", "linked_nts": [ "///A/138", "///A/140" ], "nt_type": "RNA", "dbn": ".", "summary": "non-stack", "alpha": 137.183, "beta": 127.445, "gamma": 72.175, "delta": 146.457, "epsilon": -156.657, "zeta": 163.950, "epsilon_zeta": 39.393, "bb_type": "--", "chi": -88.655, "glyco_bond": "--", "C5prime_xyz": [ -2.421, 7.559, -2.590 ], "P_xyz": [ -0.103, 6.693, -3.490 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -35.679, "theta": 158.165, "eta_prime": 23.840, "theta_prime": 129.070, "eta_base": -68.967, "theta_base": -172.651, "v0": -18.900, "v1": 33.032, "v2": -33.788, "v3": 23.804, "v4": -3.291, "amplitude": 34.738, "phase_angle": 166.567, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.105, "frame": { "rmsd": 0.004, "origin": [ 149.810, 306.501, 236.000 ], "x_axis": [ -0.699, 0.224, -0.679 ], "y_axis": [ 0.475, -0.565, -0.675 ], "z_axis": [ -0.534, -0.794, 0.289 ], "quaternion": [ -0.079, -0.380, -0.460, 0.799 ] } }, { "index": 1665, "index_chain": 139, "chain_name": "A", "nt_resnum": 140, "nt_name": "A", "nt_code": "A", "nt_id": "///A/140", "linked_nts": [ "///A/139", "///A/141" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-stack", "alpha": -82.866, "beta": 169.469, "gamma": 63.698, "delta": 80.841, "epsilon": -156.297, "zeta": 159.444, "epsilon_zeta": 44.260, "bb_type": "--", "chi": -27.893, "glyco_bond": "syn", "C5prime_xyz": [ -3.934, 4.214, -2.927 ], "P_xyz": [ -3.139, 1.757, -3.391 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -173.045, "theta": 63.283, "eta_prime": 171.910, "theta_prime": 7.237, "eta_base": -159.203, "theta_base": -40.700, "v0": 13.136, "v1": -34.913, "v2": 42.651, "v3": -36.030, "v4": 14.463, "amplitude": 42.658, "phase_angle": 1.066, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "#a", "suiteness": 0.244, "filter_rmsd": 0.042, "frame": { "rmsd": 0.012, "origin": [ 152.780, 299.869, 237.353 ], "x_axis": [ -0.595, -0.691, 0.410 ], "y_axis": [ 0.795, -0.429, 0.430 ], "z_axis": [ -0.121, 0.582, 0.804 ], "quaternion": [ -0.442, 0.086, 0.301, 0.841 ] } }, { "index": 1666, "index_chain": 140, "chain_name": "A", "nt_resnum": 141, "nt_name": "A", "nt_code": "A", "nt_id": "///A/141", "linked_nts": [ "///A/140", "///A/142" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-stack", "alpha": -33.123, "beta": -120.709, "gamma": 178.127, "delta": 152.902, "epsilon": -148.021, "zeta": -59.852, "epsilon_zeta": -88.169, "bb_type": "BI", "chi": -175.874, "glyco_bond": "anti", "C5prime_xyz": [ -2.290, 8.217, 1.776 ], "P_xyz": [ 0.256, 8.821, 1.740 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 46.447, "theta": -87.016, "eta_prime": 121.131, "theta_prime": -129.283, "eta_base": 165.609, "theta_base": -117.104, "v0": -21.829, "v1": 38.555, "v2": -39.514, "v3": 27.954, "v4": -4.069, "amplitude": 40.575, "phase_angle": 166.872, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.037, "frame": { "rmsd": 0.010, "origin": [ 153.688, 297.446, 230.726 ], "x_axis": [ -0.646, 0.191, 0.739 ], "y_axis": [ 0.611, -0.452, 0.650 ], "z_axis": [ 0.458, 0.871, 0.175 ], "quaternion": [ -0.139, 0.397, 0.505, 0.754 ] } }, { "index": 1667, "index_chain": 141, "chain_name": "A", "nt_resnum": 142, "nt_name": "C", "nt_code": "C", "nt_id": "///A/142", "linked_nts": [ "///A/141", "///A/143" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -146.295, "beta": 144.060, "gamma": 169.447, "delta": 81.555, "epsilon": -146.696, "zeta": -71.966, "epsilon_zeta": -74.730, "bb_type": "BI", "chi": -164.522, "glyco_bond": "anti", "C5prime_xyz": [ -1.324, 8.753, 0.814 ], "P_xyz": [ -0.759, 10.899, -0.563 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -160.949, "theta": 173.764, "eta_prime": -135.151, "theta_prime": -173.206, "eta_base": -96.822, "theta_base": -137.204, "v0": 0.417, "v1": -22.539, "v2": 34.823, "v3": -35.524, "v4": 22.199, "amplitude": 36.609, "phase_angle": 17.973, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.069, "frame": { "rmsd": 0.009, "origin": [ 161.470, 303.603, 225.318 ], "x_axis": [ 0.941, 0.235, 0.242 ], "y_axis": [ 0.126, -0.910, 0.394 ], "z_axis": [ 0.313, -0.340, -0.887 ], "quaternion": [ 0.190, 0.967, 0.093, 0.143 ] } }, { "index": 1668, "index_chain": 142, "chain_name": "A", "nt_resnum": 143, "nt_name": "C", "nt_code": "C", "nt_id": "///A/143", "linked_nts": [ "///A/142", "///A/144" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -65.229, "beta": 169.585, "gamma": 62.371, "delta": 83.756, "epsilon": -164.810, "zeta": -86.178, "epsilon_zeta": -78.632, "bb_type": "BI", "chi": -165.316, "glyco_bond": "anti", "C5prime_xyz": [ -1.495, 8.842, 0.799 ], "P_xyz": [ 1.040, 9.304, 1.232 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.912, "theta": -138.801, "eta_prime": -169.845, "theta_prime": -152.137, "eta_base": -126.694, "theta_base": -156.464, "v0": -4.850, "v1": -16.250, "v2": 29.889, "v3": -33.539, "v4": 24.234, "amplitude": 33.472, "phase_angle": 26.754, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.844, "filter_rmsd": 0.066, "frame": { "rmsd": 0.009, "origin": [ 163.649, 303.784, 222.020 ], "x_axis": [ 0.758, -0.254, 0.601 ], "y_axis": [ -0.441, -0.878, 0.185 ], "z_axis": [ 0.481, -0.405, -0.778 ], "quaternion": [ 0.160, 0.924, -0.188, 0.293 ] } }, { "index": 1669, "index_chain": 143, "chain_name": "A", "nt_resnum": 144, "nt_name": "U", "nt_code": "U", "nt_id": "///A/144", "linked_nts": [ "///A/143", "///A/145" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 164.338, "beta": -164.454, "gamma": 159.019, "delta": 79.581, "epsilon": -127.623, "zeta": -72.446, "epsilon_zeta": -55.177, "bb_type": "BI", "chi": -166.991, "glyco_bond": "anti", "C5prime_xyz": [ -1.385, 8.669, 0.962 ], "P_xyz": [ 0.390, 10.022, -0.374 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.624, "theta": -147.887, "eta_prime": 163.386, "theta_prime": -145.993, "eta_base": 175.012, "theta_base": -104.660, "v0": 1.447, "v1": -24.342, "v2": 36.833, "v3": -37.006, "v4": 22.390, "amplitude": 38.418, "phase_angle": 16.513, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.318, "filter_rmsd": 0.107, "frame": { "rmsd": 0.008, "origin": [ 164.656, 305.376, 218.970 ], "x_axis": [ 0.604, -0.511, 0.612 ], "y_axis": [ -0.522, -0.833, -0.181 ], "z_axis": [ 0.602, -0.210, -0.770 ], "quaternion": [ 0.008, 0.895, -0.289, 0.339 ] } }, { "index": 1670, "index_chain": 144, "chain_name": "A", "nt_resnum": 145, "nt_name": "A", "nt_code": "A", "nt_id": "///A/145", "linked_nts": [ "///A/144", "///A/146" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -64.364, "beta": 168.314, "gamma": 51.558, "delta": 78.085, "epsilon": -120.304, "zeta": -117.527, "epsilon_zeta": -2.777, "bb_type": "--", "chi": -170.477, "glyco_bond": "anti", "C5prime_xyz": [ -1.560, 8.614, 1.117 ], "P_xyz": [ 0.965, 9.108, 1.525 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.555, "theta": -133.758, "eta_prime": 179.313, "theta_prime": -140.024, "eta_base": -125.108, "theta_base": -129.764, "v0": 1.797, "v1": -25.624, "v2": 38.414, "v3": -38.388, "v4": 23.081, "amplitude": 39.975, "phase_angle": 16.066, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.738, "filter_rmsd": 0.039, "frame": { "rmsd": 0.009, "origin": [ 168.499, 303.219, 217.990 ], "x_axis": [ -0.196, -0.807, 0.557 ], "y_axis": [ -0.803, -0.194, -0.564 ], "z_axis": [ 0.563, -0.558, -0.610 ], "quaternion": [ 0.002, -0.634, 0.635, -0.442 ] } }, { "index": 1671, "index_chain": 145, "chain_name": "A", "nt_resnum": 146, "nt_name": "G", "nt_code": "G", "nt_id": "///A/146", "linked_nts": [ "///A/145", "///A/147" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 101.676, "beta": -115.604, "gamma": -150.858, "delta": 84.095, "epsilon": -102.761, "zeta": -105.974, "epsilon_zeta": 3.213, "bb_type": "--", "chi": -175.787, "glyco_bond": "anti", "C5prime_xyz": [ -1.059, 8.390, 1.462 ], "P_xyz": [ -0.150, 10.196, -0.201 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.313, "theta": -150.912, "eta_prime": -173.231, "theta_prime": -152.901, "eta_base": -149.665, "theta_base": -123.015, "v0": 5.964, "v1": -26.660, "v2": 36.159, "v3": -33.706, "v4": 17.536, "amplitude": 36.661, "phase_angle": 9.498, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 171.988, 301.603, 217.864 ], "x_axis": [ -0.376, -0.877, 0.299 ], "y_axis": [ -0.583, -0.027, -0.812 ], "z_axis": [ 0.720, -0.479, -0.502 ], "quaternion": [ 0.155, -0.537, 0.680, -0.474 ] } }, { "index": 1672, "index_chain": 146, "chain_name": "A", "nt_resnum": 147, "nt_name": "G", "nt_code": "G", "nt_id": "///A/147", "linked_nts": [ "///A/146", "///A/148" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 90.399, "beta": -119.637, "gamma": -145.010, "delta": 84.828, "epsilon": -120.344, "zeta": -70.140, "epsilon_zeta": -50.204, "bb_type": "--", "chi": -178.712, "glyco_bond": "anti", "C5prime_xyz": [ -0.947, 8.206, 1.679 ], "P_xyz": [ 0.109, 10.221, 0.404 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.311, "theta": -158.353, "eta_prime": -178.984, "theta_prime": -150.118, "eta_base": -130.182, "theta_base": -115.826, "v0": 9.543, "v1": -28.977, "v2": 36.632, "v3": -32.132, "v4": 14.286, "amplitude": 36.721, "phase_angle": 4.007, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 174.142, 298.391, 218.287 ], "x_axis": [ -0.662, -0.740, -0.124 ], "y_axis": [ -0.221, 0.351, -0.910 ], "z_axis": [ 0.717, -0.575, -0.395 ], "quaternion": [ 0.271, -0.310, 0.776, -0.478 ] } }, { "index": 1673, "index_chain": 147, "chain_name": "A", "nt_resnum": 148, "nt_name": "U", "nt_code": "U", "nt_id": "///A/148", "linked_nts": [ "///A/147", "///A/149" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -58.189, "beta": 176.076, "gamma": 46.271, "delta": 76.689, "epsilon": -114.632, "zeta": -128.792, "epsilon_zeta": 14.159, "bb_type": "--", "chi": -149.621, "glyco_bond": "anti", "C5prime_xyz": [ -1.844, 8.819, -0.115 ], "P_xyz": [ 0.588, 9.748, -0.024 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.034, "theta": -145.568, "eta_prime": -175.391, "theta_prime": -134.610, "eta_base": -132.351, "theta_base": -110.499, "v0": -1.727, "v1": -22.509, "v2": 36.843, "v3": -38.898, "v4": 25.628, "amplitude": 39.490, "phase_angle": 21.095, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.527, "filter_rmsd": 0.101, "frame": { "rmsd": 0.010, "origin": [ 174.941, 294.713, 218.280 ], "x_axis": [ -0.741, -0.297, -0.602 ], "y_axis": [ 0.363, 0.577, -0.732 ], "z_axis": [ 0.565, -0.761, -0.320 ], "quaternion": [ 0.359, 0.020, 0.812, -0.460 ] } }, { "index": 1674, "index_chain": 148, "chain_name": "A", "nt_resnum": 149, "nt_name": "A", "nt_code": "A", "nt_id": "///A/149", "linked_nts": [ "///A/148", "///A/150" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": 47.397, "beta": 152.154, "gamma": 48.091, "delta": 81.461, "epsilon": -163.479, "zeta": -86.158, "epsilon_zeta": -77.321, "bb_type": "BI", "chi": -170.171, "glyco_bond": "anti", "C5prime_xyz": [ -1.553, 8.636, 1.102 ], "P_xyz": [ 1.005, 8.877, 1.526 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -107.158, "theta": -131.153, "eta_prime": -102.183, "theta_prime": -135.677, "eta_base": -103.440, "theta_base": -102.149, "v0": -1.655, "v1": -20.654, "v2": 33.851, "v3": -35.764, "v4": 23.662, "amplitude": 36.310, "phase_angle": 21.209, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "7d", "suiteness": 0.328, "filter_rmsd": 0.038, "frame": { "rmsd": 0.013, "origin": [ 184.810, 291.699, 205.927 ], "x_axis": [ -0.454, 0.628, -0.632 ], "y_axis": [ -0.419, 0.475, 0.774 ], "z_axis": [ 0.786, 0.616, 0.047 ], "quaternion": [ 0.517, 0.076, 0.686, 0.507 ] } }, { "index": 1675, "index_chain": 149, "chain_name": "A", "nt_resnum": 150, "nt_name": "U", "nt_code": "U", "nt_id": "///A/150", "linked_nts": [ "///A/149", "///A/151" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -172.538, "beta": -138.831, "gamma": 129.956, "delta": 78.996, "epsilon": -134.879, "zeta": -81.159, "epsilon_zeta": -53.720, "bb_type": "BI", "chi": -163.840, "glyco_bond": "anti", "C5prime_xyz": [ -1.438, 8.728, 0.763 ], "P_xyz": [ 0.964, 8.984, -0.209 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.047, "theta": -139.696, "eta_prime": 172.917, "theta_prime": -144.467, "eta_base": -134.855, "theta_base": -123.060, "v0": 0.478, "v1": -23.999, "v2": 37.246, "v3": -37.917, "v4": 23.588, "amplitude": 39.141, "phase_angle": 17.901, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.107, "frame": { "rmsd": 0.011, "origin": [ 187.045, 293.944, 204.676 ], "x_axis": [ -0.618, 0.786, 0.027 ], "y_axis": [ 0.109, 0.051, 0.993 ], "z_axis": [ 0.779, 0.616, -0.117 ], "quaternion": [ 0.281, 0.335, 0.668, 0.602 ] } }, { "index": 1676, "index_chain": 150, "chain_name": "A", "nt_resnum": 151, "nt_name": "C", "nt_code": "C", "nt_id": "///A/151", "linked_nts": [ "///A/150", "///A/152" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -54.053, "beta": 158.249, "gamma": 60.386, "delta": 76.738, "epsilon": -145.621, "zeta": -72.667, "epsilon_zeta": -72.955, "bb_type": "BI", "chi": -159.984, "glyco_bond": "anti", "C5prime_xyz": [ -1.637, 8.893, 0.453 ], "P_xyz": [ 0.854, 9.548, 0.071 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.072, "theta": -144.453, "eta_prime": -174.360, "theta_prime": -143.315, "eta_base": -134.085, "theta_base": -109.721, "v0": -2.896, "v1": -21.725, "v2": 36.613, "v3": -39.282, "v4": 26.579, "amplitude": 39.674, "phase_angle": 22.655, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.702, "filter_rmsd": 0.065, "frame": { "rmsd": 0.010, "origin": [ 188.738, 297.129, 203.023 ], "x_axis": [ -0.501, 0.674, 0.543 ], "y_axis": [ 0.486, -0.300, 0.821 ], "z_axis": [ 0.716, 0.675, -0.177 ], "quaternion": [ 0.074, 0.494, 0.587, 0.637 ] } }, { "index": 1677, "index_chain": 151, "chain_name": "A", "nt_resnum": 152, "nt_name": "U", "nt_code": "U", "nt_id": "///A/152", "linked_nts": [ "///A/151", "///A/153" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -63.720, "beta": 166.075, "gamma": 63.729, "delta": 78.377, "epsilon": -127.130, "zeta": -47.452, "epsilon_zeta": -79.678, "bb_type": "--", "chi": -163.187, "glyco_bond": "anti", "C5prime_xyz": [ -1.502, 8.759, 0.700 ], "P_xyz": [ 1.067, 9.261, 0.619 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.312, "theta": -119.562, "eta_prime": -170.069, "theta_prime": -130.830, "eta_base": -123.195, "theta_base": -112.893, "v0": 0.306, "v1": -23.760, "v2": 36.991, "v3": -37.749, "v4": 23.596, "amplitude": 38.924, "phase_angle": 18.131, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.772, "filter_rmsd": 0.102, "frame": { "rmsd": 0.008, "origin": [ 190.093, 301.347, 203.126 ], "x_axis": [ -0.185, 0.234, 0.954 ], "y_axis": [ 0.703, -0.647, 0.295 ], "z_axis": [ 0.686, 0.726, -0.045 ], "quaternion": [ -0.175, 0.614, 0.382, 0.668 ] } }, { "index": 1678, "index_chain": 152, "chain_name": "A", "nt_resnum": 153, "nt_name": "U", "nt_code": "U", "nt_id": "///A/153", "linked_nts": [ "///A/152", "///A/154" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -128.132, "beta": 121.895, "gamma": 140.414, "delta": 80.574, "epsilon": -116.055, "zeta": -61.527, "epsilon_zeta": -54.528, "bb_type": "--", "chi": -168.175, "glyco_bond": "anti", "C5prime_xyz": [ -1.289, 8.598, 1.032 ], "P_xyz": [ -0.459, 10.261, -0.796 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.572, "theta": -151.239, "eta_prime": 176.388, "theta_prime": -150.585, "eta_base": -147.710, "theta_base": -108.751, "v0": 3.243, "v1": -25.421, "v2": 36.752, "v3": -35.876, "v4": 20.542, "amplitude": 37.842, "phase_angle": 13.786, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.109, "frame": { "rmsd": 0.012, "origin": [ 190.418, 304.677, 204.097 ], "x_axis": [ 0.024, -0.153, 0.988 ], "y_axis": [ 0.865, -0.493, -0.098 ], "z_axis": [ 0.502, 0.856, 0.121 ], "quaternion": [ -0.404, 0.591, 0.301, 0.630 ] } }, { "index": 1679, "index_chain": 153, "chain_name": "A", "nt_resnum": 154, "nt_name": "G", "nt_code": "G", "nt_id": "///A/154", "linked_nts": [ "///A/153", "///A/155" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem", "alpha": -104.471, "beta": 143.854, "gamma": 104.273, "delta": 76.948, "epsilon": -135.838, "zeta": -70.897, "epsilon_zeta": -64.941, "bb_type": "BI", "chi": -175.243, "glyco_bond": "anti", "C5prime_xyz": [ -1.571, 8.620, 1.386 ], "P_xyz": [ 0.433, 9.790, 0.177 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 149.886, "theta": -144.921, "eta_prime": 175.971, "theta_prime": -144.878, "eta_base": -122.369, "theta_base": -100.062, "v0": 0.777, "v1": -24.881, "v2": 38.225, "v3": -38.834, "v4": 23.931, "amplitude": 40.081, "phase_angle": 17.506, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 191.580, 306.719, 207.515 ], "x_axis": [ 0.453, -0.643, 0.618 ], "y_axis": [ 0.728, -0.133, -0.672 ], "z_axis": [ 0.514, 0.755, 0.408 ], "quaternion": [ 0.657, -0.543, -0.040, -0.521 ] } }, { "index": 1680, "index_chain": 154, "chain_name": "A", "nt_resnum": 155, "nt_name": "U", "nt_code": "U", "nt_id": "///A/155", "linked_nts": [ "///A/154", "///A/156" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -67.093, "beta": 172.626, "gamma": 57.053, "delta": 80.479, "epsilon": -139.315, "zeta": -93.645, "epsilon_zeta": -45.670, "bb_type": "BI", "chi": -164.056, "glyco_bond": "anti", "C5prime_xyz": [ -1.348, 8.642, 0.794 ], "P_xyz": [ 1.252, 8.913, 0.932 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.359, "theta": -162.492, "eta_prime": -176.264, "theta_prime": -165.292, "eta_base": -113.065, "theta_base": -177.639, "v0": 4.109, "v1": -26.592, "v2": 37.796, "v3": -36.363, "v4": 20.330, "amplitude": 38.728, "phase_angle": 12.595, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.868, "filter_rmsd": 0.111, "frame": { "rmsd": 0.011, "origin": [ 194.374, 307.397, 210.727 ], "x_axis": [ 0.800, -0.579, -0.155 ], "y_axis": [ 0.161, 0.457, -0.875 ], "z_axis": [ 0.578, 0.675, 0.459 ], "quaternion": [ 0.824, -0.470, 0.222, -0.225 ] } }, { "index": 1681, "index_chain": 155, "chain_name": "A", "nt_resnum": 156, "nt_name": "A", "nt_code": "A", "nt_id": "///A/156", "linked_nts": [ "///A/155", "///A/157" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -89.935, "beta": 148.500, "gamma": 81.535, "delta": 80.603, "epsilon": -144.543, "zeta": -69.259, "epsilon_zeta": -75.284, "bb_type": "BI", "chi": -161.198, "glyco_bond": "anti", "C5prime_xyz": [ -1.216, 8.617, 0.561 ], "P_xyz": [ 1.039, 8.890, -0.759 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.325, "theta": -137.408, "eta_prime": 163.156, "theta_prime": -141.988, "eta_base": 163.654, "theta_base": -111.176, "v0": 5.776, "v1": -28.073, "v2": 38.556, "v3": -36.140, "v4": 19.206, "amplitude": 39.183, "phase_angle": 10.268, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.020, "filter_rmsd": 0.038, "frame": { "rmsd": 0.010, "origin": [ 193.581, 309.271, 213.356 ], "x_axis": [ 0.797, -0.502, -0.335 ], "y_axis": [ 0.225, 0.762, -0.607 ], "z_axis": [ 0.560, 0.408, 0.721 ], "quaternion": [ 0.906, -0.280, 0.247, -0.201 ] } }, { "index": 1682, "index_chain": 156, "chain_name": "A", "nt_resnum": 157, "nt_name": "C", "nt_code": "C", "nt_id": "///A/157", "linked_nts": [ "///A/156", "///A/158" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -67.834, "beta": 167.432, "gamma": 64.504, "delta": 78.528, "epsilon": -144.671, "zeta": -70.699, "epsilon_zeta": -73.972, "bb_type": "BI", "chi": -162.262, "glyco_bond": "anti", "C5prime_xyz": [ -1.321, 8.747, 0.676 ], "P_xyz": [ 1.257, 9.070, 0.334 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.400, "theta": -140.988, "eta_prime": -173.733, "theta_prime": -142.399, "eta_base": -120.160, "theta_base": -116.092, "v0": 3.301, "v1": -26.761, "v2": 38.895, "v3": -37.801, "v4": 21.697, "amplitude": 40.054, "phase_angle": 13.815, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.769, "filter_rmsd": 0.072, "frame": { "rmsd": 0.012, "origin": [ 197.152, 308.846, 215.265 ], "x_axis": [ 0.716, 0.078, -0.694 ], "y_axis": [ -0.267, 0.949, -0.169 ], "z_axis": [ 0.645, 0.306, 0.700 ], "quaternion": [ 0.917, -0.130, 0.365, 0.094 ] } }, { "index": 1683, "index_chain": 157, "chain_name": "A", "nt_resnum": 158, "nt_name": "U", "nt_code": "U", "nt_id": "///A/158", "linked_nts": [ "///A/157", "///A/159" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -67.999, "beta": 162.149, "gamma": 71.733, "delta": 77.409, "epsilon": -146.007, "zeta": -54.466, "epsilon_zeta": -91.541, "bb_type": "BI", "chi": -169.525, "glyco_bond": "anti", "C5prime_xyz": [ -1.477, 8.685, 1.076 ], "P_xyz": [ 1.055, 9.288, 0.804 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.365, "theta": -127.982, "eta_prime": -172.740, "theta_prime": -122.735, "eta_base": -126.370, "theta_base": -87.881, "v0": 2.643, "v1": -26.813, "v2": 39.553, "v3": -38.782, "v4": 22.894, "amplitude": 40.915, "phase_angle": 14.825, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.453, "filter_rmsd": 0.109, "frame": { "rmsd": 0.013, "origin": [ 200.755, 308.732, 216.560 ], "x_axis": [ 0.402, 0.561, -0.724 ], "y_axis": [ -0.570, 0.772, 0.281 ], "z_axis": [ 0.716, 0.300, 0.630 ], "quaternion": [ 0.837, -0.006, 0.430, 0.338 ] } }, { "index": 1684, "index_chain": 158, "chain_name": "A", "nt_resnum": 159, "nt_name": "G", "nt_code": "G", "nt_id": "///A/159", "linked_nts": [ "///A/158", "///A/160" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -76.572, "beta": -161.570, "gamma": 63.135, "delta": 136.386, "epsilon": -142.450, "zeta": -174.793, "epsilon_zeta": 32.344, "bb_type": "--", "chi": -110.983, "glyco_bond": "anti", "C5prime_xyz": [ -2.318, 8.401, -1.724 ], "P_xyz": [ 0.086, 9.477, -1.639 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 179.203, "theta": -179.853, "eta_prime": -150.312, "theta_prime": 155.042, "eta_base": -104.988, "theta_base": 156.737, "v0": -25.836, "v1": 34.512, "v2": -29.609, "v3": 15.458, "v4": 6.358, "amplitude": 33.970, "phase_angle": 150.648, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.471, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 203.800, 310.419, 215.774 ], "x_axis": [ -0.216, 0.859, -0.465 ], "y_axis": [ -0.344, 0.379, 0.859 ], "z_axis": [ 0.914, 0.345, 0.213 ], "quaternion": [ 0.587, 0.219, 0.588, 0.512 ] } }, { "index": 1685, "index_chain": 159, "chain_name": "A", "nt_resnum": 160, "nt_name": "A", "nt_code": "A", "nt_id": "///A/160", "linked_nts": [ "///A/159", "///A/161" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": 44.598, "beta": -157.388, "gamma": -108.978, "delta": 80.532, "epsilon": -116.473, "zeta": -96.327, "epsilon_zeta": -20.147, "bb_type": "--", "chi": -168.468, "glyco_bond": "anti", "C5prime_xyz": [ -1.690, 8.671, 0.970 ], "P_xyz": [ -1.764, 11.268, 0.710 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.632, "theta": 161.516, "eta_prime": 139.790, "theta_prime": 176.262, "eta_base": 139.109, "theta_base": -138.492, "v0": -1.442, "v1": -21.570, "v2": 34.944, "v3": -36.774, "v4": 24.214, "amplitude": 37.381, "phase_angle": 20.803, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.015, "origin": [ 209.632, 301.603, 220.855 ], "x_axis": [ 0.184, 0.426, -0.886 ], "y_axis": [ -0.523, 0.805, 0.279 ], "z_axis": [ 0.832, 0.413, 0.371 ], "quaternion": [ 0.768, -0.044, 0.559, 0.309 ] } }, { "index": 1686, "index_chain": 160, "chain_name": "A", "nt_resnum": 161, "nt_name": "A", "nt_code": "A", "nt_id": "///A/161", "linked_nts": [ "///A/160", "///A/162" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": -71.586, "beta": 131.998, "gamma": 74.668, "delta": 79.412, "epsilon": -131.149, "zeta": 25.360, "epsilon_zeta": 203.491, "bb_type": "--", "chi": -161.881, "glyco_bond": "anti", "C5prime_xyz": [ -1.397, 8.611, 0.614 ], "P_xyz": [ 0.783, 8.784, -0.806 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.799, "theta": -8.048, "eta_prime": 173.519, "theta_prime": -57.700, "eta_base": -137.704, "theta_base": -94.443, "v0": 4.706, "v1": -27.637, "v2": 38.848, "v3": -37.190, "v4": 20.420, "amplitude": 39.706, "phase_angle": 11.933, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.594, "filter_rmsd": 0.038, "frame": { "rmsd": 0.014, "origin": [ 212.475, 302.899, 221.180 ], "x_axis": [ -0.058, 0.808, -0.587 ], "y_axis": [ -0.320, 0.542, 0.777 ], "z_axis": [ 0.946, 0.233, 0.228 ], "quaternion": [ 0.654, 0.208, 0.586, 0.431 ] } }, { "index": 1687, "index_chain": 161, "chain_name": "A", "nt_resnum": 162, "nt_name": "U", "nt_code": "U", "nt_id": "///A/162", "linked_nts": [ "///A/161", "///A/163" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-stack", "alpha": 97.491, "beta": 155.481, "gamma": 109.306, "delta": 144.566, "epsilon": -139.090, "zeta": 138.335, "epsilon_zeta": 82.574, "bb_type": "--", "chi": -144.514, "glyco_bond": "anti", "C5prime_xyz": [ -2.181, 8.747, 0.022 ], "P_xyz": [ 0.284, 9.523, -0.426 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 31.615, "theta": 147.212, "eta_prime": 97.649, "theta_prime": 127.876, "eta_base": 118.163, "theta_base": 126.684, "v0": -24.871, "v1": 37.750, "v2": -35.470, "v3": 22.037, "v4": 1.496, "amplitude": 38.014, "phase_angle": 158.920, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.099, "frame": { "rmsd": 0.008, "origin": [ 215.388, 307.391, 219.739 ], "x_axis": [ 0.237, -0.968, -0.087 ], "y_axis": [ -0.144, -0.124, 0.982 ], "z_axis": [ -0.961, -0.220, -0.168 ], "quaternion": [ 0.486, 0.618, -0.449, -0.424 ] } }, { "index": 1688, "index_chain": 162, "chain_name": "A", "nt_resnum": 163, "nt_name": "C", "nt_code": "C", "nt_id": "///A/163", "linked_nts": [ "///A/162", "///A/164" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 14.501, "beta": 117.810, "gamma": -36.872, "delta": 86.741, "epsilon": -151.600, "zeta": -6.657, "epsilon_zeta": -144.943, "bb_type": "--", "chi": -160.904, "glyco_bond": "anti", "C5prime_xyz": [ -1.164, 8.707, 0.641 ], "P_xyz": [ 0.202, 9.119, 2.836 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.947, "theta": -109.445, "eta_prime": 141.358, "theta_prime": -120.070, "eta_base": 135.148, "theta_base": -100.567, "v0": 2.769, "v1": -22.215, "v2": 32.104, "v3": -31.369, "v4": 18.085, "amplitude": 33.073, "phase_angle": 13.910, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.070, "frame": { "rmsd": 0.010, "origin": [ 217.820, 313.661, 219.724 ], "x_axis": [ 0.072, -0.994, -0.087 ], "y_axis": [ -0.417, -0.110, 0.902 ], "z_axis": [ -0.906, -0.029, -0.423 ], "quaternion": [ 0.367, 0.633, -0.557, -0.392 ] } }, { "index": 1689, "index_chain": 163, "chain_name": "A", "nt_resnum": 164, "nt_name": "C", "nt_code": "C", "nt_id": "///A/164", "linked_nts": [ "///A/163", "///A/165" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -149.481, "beta": 97.348, "gamma": 163.129, "delta": 80.420, "epsilon": -174.522, "zeta": 26.550, "epsilon_zeta": 158.927, "bb_type": "--", "chi": -172.510, "glyco_bond": "anti", "C5prime_xyz": [ -1.168, 8.600, 1.288 ], "P_xyz": [ -1.201, 10.671, -0.308 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.478, "theta": -131.658, "eta_prime": -174.791, "theta_prime": -106.079, "eta_base": -140.719, "theta_base": -56.766, "v0": 3.350, "v1": -25.633, "v2": 37.020, "v3": -36.021, "v4": 20.585, "amplitude": 38.093, "phase_angle": 13.629, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.069, "frame": { "rmsd": 0.010, "origin": [ 216.141, 312.280, 216.497 ], "x_axis": [ -0.040, -0.964, 0.264 ], "y_axis": [ -0.550, 0.242, 0.800 ], "z_axis": [ -0.834, -0.113, -0.539 ], "quaternion": [ -0.407, -0.561, 0.675, 0.255 ] } }, { "index": 1690, "index_chain": 164, "chain_name": "A", "nt_resnum": 165, "nt_name": "A", "nt_code": "A", "nt_id": "///A/165", "linked_nts": [ "///A/164", "///A/166" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": -124.120, "beta": -167.729, "gamma": 59.795, "delta": 145.487, "epsilon": -154.267, "zeta": -154.483, "epsilon_zeta": 0.216, "bb_type": "--", "chi": -111.577, "glyco_bond": "anti", "C5prime_xyz": [ -2.533, 8.391, -1.602 ], "P_xyz": [ -0.316, 9.796, -1.381 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 142.244, "theta": -140.523, "eta_prime": -152.653, "theta_prime": -169.263, "eta_base": -82.751, "theta_base": -134.416, "v0": -26.528, "v1": 40.160, "v2": -37.476, "v3": 23.040, "v4": 1.989, "amplitude": 40.303, "phase_angle": 158.413, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.010, "origin": [ 211.795, 307.780, 220.890 ], "x_axis": [ -0.173, 0.203, 0.964 ], "y_axis": [ -0.399, 0.880, -0.257 ], "z_axis": [ -0.901, -0.429, -0.071 ], "quaternion": [ 0.639, 0.067, -0.729, 0.235 ] } }, { "index": 1691, "index_chain": 165, "chain_name": "A", "nt_resnum": 166, "nt_name": "U", "nt_code": "U", "nt_id": "///A/166", "linked_nts": [ "///A/165", "///A/167" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": 124.144, "beta": -146.462, "gamma": 170.958, "delta": 83.124, "epsilon": -145.086, "zeta": -64.156, "epsilon_zeta": -80.930, "bb_type": "BI", "chi": -152.565, "glyco_bond": "anti", "C5prime_xyz": [ -1.362, 8.736, 0.086 ], "P_xyz": [ 0.060, 9.580, -1.964 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 146.598, "theta": -150.542, "eta_prime": 152.331, "theta_prime": -151.797, "eta_base": -157.637, "theta_base": -119.433, "v0": 2.954, "v1": -24.119, "v2": 34.913, "v3": -34.075, "v4": 19.665, "amplitude": 35.972, "phase_angle": 13.938, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.113, "frame": { "rmsd": 0.016, "origin": [ 209.474, 305.589, 220.585 ], "x_axis": [ -0.544, 0.557, 0.627 ], "y_axis": [ -0.324, 0.550, -0.770 ], "z_axis": [ -0.774, -0.622, -0.119 ], "quaternion": [ -0.471, 0.079, 0.744, -0.468 ] } }, { "index": 1692, "index_chain": 166, "chain_name": "A", "nt_resnum": 167, "nt_name": "A", "nt_code": "A", "nt_id": "///A/167", "linked_nts": [ "///A/166", "///A/168" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -77.172, "beta": 167.883, "gamma": 73.647, "delta": 78.448, "epsilon": -128.777, "zeta": -51.256, "epsilon_zeta": -77.521, "bb_type": "BI", "chi": -175.357, "glyco_bond": "anti", "C5prime_xyz": [ -1.390, 8.498, 1.416 ], "P_xyz": [ 1.182, 9.010, 1.296 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.877, "theta": -111.294, "eta_prime": -169.795, "theta_prime": -108.129, "eta_base": -119.329, "theta_base": -63.316, "v0": 3.503, "v1": -26.972, "v2": 38.984, "v3": -37.865, "v4": 21.693, "amplitude": 40.113, "phase_angle": 13.626, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.358, "filter_rmsd": 0.040, "frame": { "rmsd": 0.009, "origin": [ 203.980, 304.457, 221.503 ], "x_axis": [ -0.416, 0.908, -0.049 ], "y_axis": [ 0.308, 0.090, -0.947 ], "z_axis": [ -0.856, -0.409, -0.317 ], "quaternion": [ -0.299, 0.450, 0.675, -0.502 ] } }, { "index": 1693, "index_chain": 167, "chain_name": "A", "nt_resnum": 168, "nt_name": "G", "nt_code": "G", "nt_id": "///A/168", "linked_nts": [ "///A/167", "///A/169" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -72.466, "beta": 170.217, "gamma": 63.756, "delta": 77.163, "epsilon": -137.886, "zeta": -79.052, "epsilon_zeta": -58.833, "bb_type": "BI", "chi": -174.845, "glyco_bond": "anti", "C5prime_xyz": [ -1.580, 8.627, 1.371 ], "P_xyz": [ 0.983, 9.129, 1.618 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.033, "theta": -142.308, "eta_prime": -168.352, "theta_prime": -139.933, "eta_base": -92.160, "theta_base": -111.241, "v0": 0.464, "v1": -24.809, "v2": 38.506, "v3": -39.203, "v4": 24.408, "amplitude": 40.471, "phase_angle": 17.927, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.530, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 199.589, 307.856, 218.475 ], "x_axis": [ 0.206, 0.484, -0.850 ], "y_axis": [ 0.513, -0.793, -0.327 ], "z_axis": [ -0.833, -0.369, -0.412 ], "quaternion": [ 0.013, 0.776, 0.321, -0.542 ] } }, { "index": 1694, "index_chain": 168, "chain_name": "A", "nt_resnum": 169, "nt_name": "G", "nt_code": "G", "nt_id": "///A/169", "linked_nts": [ "///A/168", "///A/170" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -51.101, "beta": 160.911, "gamma": 56.758, "delta": 77.869, "epsilon": -144.941, "zeta": -98.686, "epsilon_zeta": -46.255, "bb_type": "BI", "chi": -170.377, "glyco_bond": "anti", "C5prime_xyz": [ -1.784, 8.784, 1.080 ], "P_xyz": [ 0.743, 9.411, 1.388 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.897, "theta": -132.121, "eta_prime": -171.150, "theta_prime": -142.084, "eta_base": -126.360, "theta_base": -128.801, "v0": -3.105, "v1": -20.821, "v2": 35.569, "v3": -38.344, "v4": 26.086, "amplitude": 38.672, "phase_angle": 23.109, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.732, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 196.316, 308.775, 216.326 ], "x_axis": [ 0.512, -0.031, -0.859 ], "y_axis": [ 0.297, -0.931, 0.211 ], "z_axis": [ -0.806, -0.363, -0.467 ], "quaternion": [ 0.168, 0.853, 0.078, -0.488 ] } }, { "index": 1695, "index_chain": 169, "chain_name": "A", "nt_resnum": 170, "nt_name": "U", "nt_code": "U", "nt_id": "///A/170", "linked_nts": [ "///A/169", "///A/171" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 142.702, "beta": -148.632, "gamma": -176.363, "delta": 80.072, "epsilon": -127.829, "zeta": -80.910, "epsilon_zeta": -46.919, "bb_type": "--", "chi": -169.966, "glyco_bond": "anti", "C5prime_xyz": [ -1.275, 8.587, 1.140 ], "P_xyz": [ 0.158, 10.191, -0.354 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.255, "theta": -160.469, "eta_prime": 172.912, "theta_prime": -154.300, "eta_base": -157.045, "theta_base": -119.178, "v0": 3.885, "v1": -26.751, "v2": 38.304, "v3": -36.973, "v4": 20.825, "amplitude": 39.308, "phase_angle": 12.975, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.341, "filter_rmsd": 0.109, "frame": { "rmsd": 0.010, "origin": [ 193.588, 309.957, 213.937 ], "x_axis": [ 0.594, -0.418, -0.688 ], "y_axis": [ -0.102, -0.887, 0.451 ], "z_axis": [ -0.798, -0.198, -0.569 ], "quaternion": [ 0.186, 0.873, -0.149, -0.425 ] } }, { "index": 1696, "index_chain": 170, "chain_name": "A", "nt_resnum": 171, "nt_name": "G", "nt_code": "G", "nt_id": "///A/171", "linked_nts": [ "///A/170", "///A/172" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem", "alpha": -50.551, "beta": 155.041, "gamma": 62.816, "delta": 81.017, "epsilon": -113.136, "zeta": -101.040, "epsilon_zeta": -12.097, "bb_type": "--", "chi": -176.441, "glyco_bond": "anti", "C5prime_xyz": [ -1.686, 8.641, 1.437 ], "P_xyz": [ 0.881, 9.090, 1.703 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.284, "theta": -114.302, "eta_prime": -161.497, "theta_prime": -124.880, "eta_base": -116.224, "theta_base": -101.640, "v0": -2.195, "v1": -20.506, "v2": 34.041, "v3": -36.287, "v4": 24.271, "amplitude": 36.704, "phase_angle": 21.962, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.544, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 191.692, 308.737, 209.524 ], "x_axis": [ 0.534, -0.836, -0.126 ], "y_axis": [ -0.364, -0.362, 0.858 ], "z_axis": [ -0.763, -0.413, -0.498 ], "quaternion": [ 0.411, 0.774, -0.388, -0.287 ] } }, { "index": 1697, "index_chain": 171, "chain_name": "A", "nt_resnum": 172, "nt_name": "C", "nt_code": "C", "nt_id": "///A/172", "linked_nts": [ "///A/171", "///A/173" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 94.147, "beta": -126.105, "gamma": -140.091, "delta": 83.870, "epsilon": -145.596, "zeta": -70.085, "epsilon_zeta": -75.511, "bb_type": "BI", "chi": -165.698, "glyco_bond": "anti", "C5prime_xyz": [ -1.163, 8.671, 0.910 ], "P_xyz": [ -0.481, 10.599, -0.719 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.196, "theta": -156.527, "eta_prime": -176.139, "theta_prime": -158.642, "eta_base": -131.034, "theta_base": -125.295, "v0": 2.405, "v1": -23.256, "v2": 34.176, "v3": -33.675, "v4": 19.725, "amplitude": 35.344, "phase_angle": 14.774, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.069, "frame": { "rmsd": 0.010, "origin": [ 191.320, 306.807, 206.502 ], "x_axis": [ 0.221, -0.949, 0.226 ], "y_axis": [ -0.750, -0.018, 0.662 ], "z_axis": [ -0.624, -0.316, -0.715 ], "quaternion": [ 0.350, 0.699, -0.607, -0.142 ] } }, { "index": 1698, "index_chain": 172, "chain_name": "A", "nt_resnum": 173, "nt_name": "A", "nt_code": "A", "nt_id": "///A/173", "linked_nts": [ "///A/172", "///A/174" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 169.804, "beta": -172.286, "gamma": 153.462, "delta": 82.035, "epsilon": -119.290, "zeta": -85.641, "epsilon_zeta": -33.649, "bb_type": "--", "chi": -172.854, "glyco_bond": "anti", "C5prime_xyz": [ -1.287, 8.443, 1.302 ], "P_xyz": [ 0.577, 9.877, 0.141 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 146.505, "theta": -155.193, "eta_prime": 167.286, "theta_prime": -152.583, "eta_base": -144.065, "theta_base": -117.218, "v0": 4.719, "v1": -26.066, "v2": 36.343, "v3": -34.676, "v4": 18.892, "amplitude": 37.090, "phase_angle": 11.513, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.124, "filter_rmsd": 0.039, "frame": { "rmsd": 0.015, "origin": [ 190.833, 304.117, 204.048 ], "x_axis": [ -0.094, -0.647, 0.757 ], "y_axis": [ -0.832, 0.469, 0.297 ], "z_axis": [ -0.547, -0.602, -0.582 ], "quaternion": [ -0.445, -0.505, 0.732, -0.104 ] } }, { "index": 1699, "index_chain": 173, "chain_name": "A", "nt_resnum": 174, "nt_name": "A", "nt_code": "A", "nt_id": "///A/174", "linked_nts": [ "///A/173", "///A/175" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -67.911, "beta": 153.799, "gamma": 64.714, "delta": 78.532, "epsilon": -133.982, "zeta": -81.878, "epsilon_zeta": -52.104, "bb_type": "BI", "chi": -162.884, "glyco_bond": "anti", "C5prime_xyz": [ -1.401, 8.669, 0.678 ], "P_xyz": [ 1.108, 9.057, 0.061 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.614, "theta": -145.458, "eta_prime": 176.730, "theta_prime": -147.215, "eta_base": -133.986, "theta_base": -120.259, "v0": 3.103, "v1": -26.256, "v2": 38.218, "v3": -37.450, "v4": 21.643, "amplitude": 39.420, "phase_angle": 14.186, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.396, "filter_rmsd": 0.037, "frame": { "rmsd": 0.011, "origin": [ 189.748, 300.864, 203.271 ], "x_axis": [ -0.529, -0.157, 0.834 ], "y_axis": [ -0.699, 0.637, -0.323 ], "z_axis": [ -0.481, -0.754, -0.447 ], "quaternion": [ -0.407, -0.265, 0.808, -0.333 ] } }, { "index": 1700, "index_chain": 174, "chain_name": "A", "nt_resnum": 175, "nt_name": "G", "nt_code": "G", "nt_id": "///A/175", "linked_nts": [ "///A/174", "///A/176" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -75.648, "beta": 154.474, "gamma": 74.561, "delta": 80.553, "epsilon": -141.236, "zeta": -87.785, "epsilon_zeta": -53.451, "bb_type": "BI", "chi": -166.052, "glyco_bond": "anti", "C5prime_xyz": [ -1.340, 8.628, 0.887 ], "P_xyz": [ 1.128, 9.026, 0.133 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.837, "theta": -150.951, "eta_prime": 178.226, "theta_prime": -151.628, "eta_base": -136.924, "theta_base": -133.080, "v0": 3.787, "v1": -26.184, "v2": 37.427, "v3": -36.240, "v4": 20.507, "amplitude": 38.425, "phase_angle": 13.086, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.280, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 188.282, 297.784, 203.342 ], "x_axis": [ -0.749, 0.322, 0.579 ], "y_axis": [ -0.391, 0.490, -0.779 ], "z_axis": [ -0.534, -0.810, -0.241 ], "quaternion": [ -0.353, -0.022, 0.787, -0.505 ] } }, { "index": 1701, "index_chain": 175, "chain_name": "A", "nt_resnum": 176, "nt_name": "A", "nt_code": "A", "nt_id": "///A/176", "linked_nts": [ "///A/175", "///A/177" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -56.019, "beta": 154.136, "gamma": 68.034, "delta": 85.427, "epsilon": -143.256, "zeta": -69.824, "epsilon_zeta": -73.432, "bb_type": "BI", "chi": -163.748, "glyco_bond": "anti", "C5prime_xyz": [ -1.632, 8.693, 0.765 ], "P_xyz": [ 0.967, 9.016, 0.537 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.064, "theta": -132.160, "eta_prime": -167.001, "theta_prime": -130.634, "eta_base": -134.940, "theta_base": -51.852, "v0": -1.413, "v1": -18.921, "v2": 30.826, "v3": -32.427, "v4": 21.425, "amplitude": 33.011, "phase_angle": 20.961, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.485, "filter_rmsd": 0.042, "frame": { "rmsd": 0.013, "origin": [ 186.630, 294.530, 204.029 ], "x_axis": [ -0.815, 0.558, 0.155 ], "y_axis": [ -0.039, 0.214, -0.976 ], "z_axis": [ -0.578, -0.802, -0.153 ], "quaternion": [ -0.248, 0.176, 0.739, -0.602 ] } }, { "index": 1702, "index_chain": 176, "chain_name": "A", "nt_resnum": 177, "nt_name": "G", "nt_code": "G", "nt_id": "///A/177", "linked_nts": [ "///A/176", "///A/178" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,non-canonical,helix", "alpha": -68.334, "beta": -176.594, "gamma": 60.288, "delta": 142.213, "epsilon": -111.365, "zeta": -77.299, "epsilon_zeta": -34.067, "bb_type": "--", "chi": 66.832, "glyco_bond": "syn", "C5prime_xyz": [ -5.420, 4.789, 1.471 ], "P_xyz": [ -6.104, 2.275, 1.242 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -172.432, "theta": -71.953, "eta_prime": -145.978, "theta_prime": -83.727, "eta_base": -63.904, "theta_base": -60.718, "v0": -26.489, "v1": 38.019, "v2": -34.309, "v3": 20.005, "v4": 3.852, "amplitude": 37.735, "phase_angle": 155.395, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.912, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 183.249, 294.161, 200.018 ], "x_axis": [ -0.239, 0.428, 0.872 ], "y_axis": [ 0.484, -0.726, 0.489 ], "z_axis": [ 0.842, 0.539, -0.033 ], "quaternion": [ -0.020, 0.616, 0.370, 0.695 ] } }, { "index": 1703, "index_chain": 177, "chain_name": "A", "nt_resnum": 178, "nt_name": "G", "nt_code": "G", "nt_id": "///A/178", "linked_nts": [ "///A/177", "///A/179" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -74.133, "beta": 163.012, "gamma": 57.582, "delta": 79.104, "epsilon": -148.458, "zeta": -68.446, "epsilon_zeta": -80.012, "bb_type": "BI", "chi": -162.981, "glyco_bond": "anti", "C5prime_xyz": [ -1.350, 8.728, 0.673 ], "P_xyz": [ 1.226, 9.098, 0.427 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 146.329, "theta": -140.680, "eta_prime": -169.316, "theta_prime": -140.739, "eta_base": -141.409, "theta_base": -112.889, "v0": 2.421, "v1": -25.894, "v2": 38.237, "v3": -37.771, "v4": 22.319, "amplitude": 39.606, "phase_angle": 15.110, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.569, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 181.189, 287.034, 192.829 ], "x_axis": [ 0.800, 0.361, -0.479 ], "y_axis": [ 0.575, -0.239, 0.782 ], "z_axis": [ 0.168, -0.902, -0.399 ], "quaternion": [ 0.539, 0.781, 0.300, -0.100 ] } }, { "index": 1704, "index_chain": 178, "chain_name": "A", "nt_resnum": 179, "nt_name": "C", "nt_code": "C", "nt_id": "///A/179", "linked_nts": [ "///A/178", "///A/180" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -72.191, "beta": 173.290, "gamma": 65.539, "delta": 77.582, "epsilon": -145.164, "zeta": -73.871, "epsilon_zeta": -71.294, "bb_type": "BI", "chi": -162.788, "glyco_bond": "anti", "C5prime_xyz": [ -1.457, 8.800, 0.670 ], "P_xyz": [ 1.092, 9.337, 0.552 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.537, "theta": -145.621, "eta_prime": -175.362, "theta_prime": -145.812, "eta_base": -130.601, "theta_base": -122.570, "v0": 1.043, "v1": -25.115, "v2": 38.451, "v3": -38.695, "v4": 23.751, "amplitude": 40.218, "phase_angle": 17.048, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.716, "filter_rmsd": 0.069, "frame": { "rmsd": 0.013, "origin": [ 182.538, 284.998, 189.602 ], "x_axis": [ 0.958, 0.261, 0.117 ], "y_axis": [ 0.022, -0.475, 0.880 ], "z_axis": [ 0.285, -0.840, -0.461 ], "quaternion": [ 0.506, 0.851, 0.083, 0.118 ] } }, { "index": 1705, "index_chain": 179, "chain_name": "A", "nt_resnum": 180, "nt_name": "G", "nt_code": "G", "nt_id": "///A/180", "linked_nts": [ "///A/179", "///A/181" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -61.821, "beta": 168.800, "gamma": 56.047, "delta": 75.942, "epsilon": -118.630, "zeta": -117.745, "epsilon_zeta": -0.885, "bb_type": "--", "chi": -163.128, "glyco_bond": "anti", "C5prime_xyz": [ -1.630, 8.805, 0.658 ], "P_xyz": [ 0.885, 9.508, 0.622 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.881, "theta": -179.165, "eta_prime": -177.087, "theta_prime": 179.898, "eta_base": -141.898, "theta_base": 160.526, "v0": 0.166, "v1": -24.752, "v2": 38.684, "v3": -39.628, "v4": 24.792, "amplitude": 40.758, "phase_angle": 18.355, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.890, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 184.572, 283.330, 186.900 ], "x_axis": [ 0.797, 0.092, 0.597 ], "y_axis": [ -0.431, -0.607, 0.668 ], "z_axis": [ 0.424, -0.789, -0.444 ], "quaternion": [ 0.432, 0.844, -0.100, 0.303 ] } }, { "index": 1706, "index_chain": 180, "chain_name": "A", "nt_resnum": 181, "nt_name": "A", "nt_code": "A", "nt_id": "///A/181", "linked_nts": [ "///A/180", "///A/182" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -138.036, "beta": 157.151, "gamma": 78.984, "delta": 80.423, "epsilon": -131.314, "zeta": -83.119, "epsilon_zeta": -48.195, "bb_type": "BI", "chi": -179.455, "glyco_bond": "anti", "C5prime_xyz": [ -1.641, 8.459, 1.621 ], "P_xyz": [ 0.897, 9.047, 1.419 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 128.149, "theta": -143.169, "eta_prime": 124.012, "theta_prime": -143.963, "eta_base": 107.941, "theta_base": -114.407, "v0": 1.065, "v1": -24.140, "v2": 36.712, "v3": -37.054, "v4": 22.703, "amplitude": 38.390, "phase_angle": 17.003, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.011, "origin": [ 181.406, 279.576, 180.682 ], "x_axis": [ -0.081, 0.816, 0.572 ], "y_axis": [ -0.160, -0.577, 0.801 ], "z_axis": [ 0.984, -0.027, 0.177 ], "quaternion": [ 0.360, 0.574, 0.286, 0.677 ] } }, { "index": 1707, "index_chain": 181, "chain_name": "A", "nt_resnum": 182, "nt_name": "A", "nt_code": "A", "nt_id": "///A/182", "linked_nts": [ "///A/181", "///A/183" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -64.833, "beta": 152.119, "gamma": 69.901, "delta": 78.920, "epsilon": -140.147, "zeta": -73.410, "epsilon_zeta": -66.737, "bb_type": "BI", "chi": -169.196, "glyco_bond": "anti", "C5prime_xyz": [ -1.493, 8.619, 1.026 ], "P_xyz": [ 1.017, 9.086, 0.478 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.338, "theta": -138.423, "eta_prime": -175.472, "theta_prime": -140.230, "eta_base": -125.948, "theta_base": -106.244, "v0": 2.165, "v1": -25.774, "v2": 38.302, "v3": -37.976, "v4": 22.579, "amplitude": 39.741, "phase_angle": 15.466, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.426, "filter_rmsd": 0.040, "frame": { "rmsd": 0.010, "origin": [ 184.800, 281.188, 180.767 ], "x_axis": [ 0.027, 0.313, 0.949 ], "y_axis": [ -0.005, -0.950, 0.313 ], "z_axis": [ 1.000, -0.013, -0.024 ], "quaternion": [ 0.115, 0.707, 0.109, 0.689 ] } }, { "index": 1708, "index_chain": 182, "chain_name": "A", "nt_resnum": 183, "nt_name": "C", "nt_code": "C", "nt_id": "///A/183", "linked_nts": [ "///A/182", "///A/184" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,multiplet", "alpha": -61.895, "beta": 163.297, "gamma": 65.635, "delta": 78.858, "epsilon": -118.334, "zeta": -84.288, "epsilon_zeta": -34.046, "bb_type": "--", "chi": -166.464, "glyco_bond": "anti", "C5prime_xyz": [ -1.361, 8.807, 0.875 ], "P_xyz": [ 1.218, 9.224, 0.821 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.332, "theta": -132.363, "eta_prime": -167.078, "theta_prime": -127.674, "eta_base": -117.014, "theta_base": -97.653, "v0": -1.884, "v1": -21.795, "v2": 35.891, "v3": -37.895, "v4": 25.118, "amplitude": 38.527, "phase_angle": 21.315, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.707, "filter_rmsd": 0.069, "frame": { "rmsd": 0.013, "origin": [ 188.035, 282.796, 182.461 ], "x_axis": [ -0.021, -0.392, 0.920 ], "y_axis": [ 0.049, -0.919, -0.391 ], "z_axis": [ 0.999, 0.037, 0.039 ], "quaternion": [ -0.157, 0.682, -0.126, 0.703 ] } }, { "index": 1709, "index_chain": 183, "chain_name": "A", "nt_resnum": 184, "nt_name": "C", "nt_code": "C", "nt_id": "///A/184", "linked_nts": [ "///A/183", "///A/185" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -57.464, "beta": 168.956, "gamma": 53.889, "delta": 81.046, "epsilon": -141.987, "zeta": -85.878, "epsilon_zeta": -56.108, "bb_type": "BI", "chi": -157.386, "glyco_bond": "anti", "C5prime_xyz": [ -1.465, 8.815, 0.362 ], "P_xyz": [ 1.090, 9.293, 0.443 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.336, "theta": -150.849, "eta_prime": -174.274, "theta_prime": -149.622, "eta_base": -132.866, "theta_base": -135.169, "v0": -0.692, "v1": -22.019, "v2": 35.058, "v3": -36.498, "v4": 23.426, "amplitude": 37.233, "phase_angle": 19.683, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.477, "filter_rmsd": 0.066, "frame": { "rmsd": 0.012, "origin": [ 193.021, 281.728, 185.096 ], "x_axis": [ -0.354, -0.855, 0.379 ], "y_axis": [ -0.021, -0.398, -0.917 ], "z_axis": [ 0.935, -0.332, 0.123 ], "quaternion": [ -0.305, 0.480, -0.456, 0.685 ] } }, { "index": 1710, "index_chain": 184, "chain_name": "A", "nt_resnum": 185, "nt_name": "A", "nt_code": "A", "nt_id": "///A/185", "linked_nts": [ "///A/184", "///A/186" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -55.249, "beta": 161.697, "gamma": 55.398, "delta": 79.340, "epsilon": -158.566, "zeta": -78.565, "epsilon_zeta": -80.001, "bb_type": "BI", "chi": -159.673, "glyco_bond": "anti", "C5prime_xyz": [ -1.803, 8.793, 0.446 ], "P_xyz": [ 0.702, 9.518, 0.393 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.419, "theta": -126.811, "eta_prime": -177.956, "theta_prime": -138.154, "eta_base": -151.730, "theta_base": -105.513, "v0": -2.452, "v1": -21.100, "v2": 35.225, "v3": -37.555, "v4": 25.253, "amplitude": 38.035, "phase_angle": 22.163, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.766, "filter_rmsd": 0.038, "frame": { "rmsd": 0.015, "origin": [ 196.757, 280.888, 186.952 ], "x_axis": [ -0.495, -0.869, -0.016 ], "y_axis": [ 0.114, -0.047, -0.992 ], "z_axis": [ 0.861, -0.493, 0.122 ], "quaternion": [ -0.381, 0.328, -0.576, 0.645 ] } }, { "index": 1711, "index_chain": 185, "chain_name": "A", "nt_resnum": 186, "nt_name": "G", "nt_code": "G", "nt_id": "///A/186", "linked_nts": [ "///A/185", "///A/187" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 153.575, "beta": -159.309, "gamma": 171.246, "delta": 81.972, "epsilon": -138.557, "zeta": -75.663, "epsilon_zeta": -62.894, "bb_type": "BI", "chi": -173.152, "glyco_bond": "anti", "C5prime_xyz": [ -1.075, 8.449, 1.299 ], "P_xyz": [ 0.620, 9.948, -0.035 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.092, "theta": -161.560, "eta_prime": 174.178, "theta_prime": -159.433, "eta_base": -130.026, "theta_base": -133.871, "v0": 6.648, "v1": -28.209, "v2": 37.901, "v3": -35.075, "v4": 17.983, "amplitude": 38.360, "phase_angle": 8.869, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.838, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 198.125, 277.538, 188.416 ], "x_axis": [ -0.380, -0.677, -0.631 ], "y_axis": [ 0.509, 0.416, -0.753 ], "z_axis": [ 0.772, -0.607, 0.186 ], "quaternion": [ 0.553, -0.066, 0.634, -0.536 ] } }, { "index": 1712, "index_chain": 186, "chain_name": "A", "nt_resnum": 187, "nt_name": "G", "nt_code": "G", "nt_id": "///A/187", "linked_nts": [ "///A/186", "///A/188" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -64.861, "beta": 179.356, "gamma": 48.842, "delta": 77.184, "epsilon": -139.916, "zeta": -67.967, "epsilon_zeta": -71.948, "bb_type": "BI", "chi": -168.420, "glyco_bond": "anti", "C5prime_xyz": [ -1.256, 8.667, 0.997 ], "P_xyz": [ 1.288, 9.026, 1.517 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.993, "theta": -138.297, "eta_prime": 176.879, "theta_prime": -134.679, "eta_base": -146.246, "theta_base": -108.109, "v0": 3.699, "v1": -27.832, "v2": 40.231, "v3": -39.029, "v4": 22.256, "amplitude": 41.376, "phase_angle": 13.512, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.892, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 199.620, 273.887, 189.771 ], "x_axis": [ -0.196, -0.169, -0.966 ], "y_axis": [ 0.626, 0.737, -0.256 ], "z_axis": [ 0.755, -0.655, -0.039 ], "quaternion": [ 0.613, 0.163, 0.702, -0.324 ] } }, { "index": 1713, "index_chain": 187, "chain_name": "A", "nt_resnum": 188, "nt_name": "G", "nt_code": "G", "nt_id": "///A/188", "linked_nts": [ "///A/187", "///A/189" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -67.304, "beta": 173.777, "gamma": 60.281, "delta": 74.869, "epsilon": -161.387, "zeta": -78.860, "epsilon_zeta": -82.527, "bb_type": "BI", "chi": -163.470, "glyco_bond": "anti", "C5prime_xyz": [ -1.841, 8.810, 0.657 ], "P_xyz": [ 0.609, 9.676, 0.758 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.999, "theta": -123.157, "eta_prime": -177.327, "theta_prime": -123.933, "eta_base": -134.145, "theta_base": -75.596, "v0": -1.853, "v1": -23.500, "v2": 38.702, "v3": -40.720, "v4": 26.842, "amplitude": 41.477, "phase_angle": 21.081, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.809, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 200.388, 270.352, 188.290 ], "x_axis": [ 0.032, 0.367, -0.930 ], "y_axis": [ 0.715, 0.641, 0.278 ], "z_axis": [ 0.698, -0.674, -0.242 ], "quaternion": [ 0.598, 0.398, 0.680, -0.145 ] } }, { "index": 1714, "index_chain": 188, "chain_name": "A", "nt_resnum": 189, "nt_name": "G", "nt_code": "G", "nt_id": "///A/189", "linked_nts": [ "///A/188", "///A/190" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": 159.805, "beta": -129.163, "gamma": 161.615, "delta": 75.051, "epsilon": -121.838, "zeta": -101.601, "epsilon_zeta": -20.238, "bb_type": "--", "chi": -173.443, "glyco_bond": "anti", "C5prime_xyz": [ -1.577, 8.642, 1.343 ], "P_xyz": [ 0.515, 9.543, 0.106 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.725, "theta": 160.509, "eta_prime": -169.087, "theta_prime": 148.198, "eta_base": -97.184, "theta_base": 139.059, "v0": -0.208, "v1": -24.080, "v2": 38.289, "v3": -39.400, "v4": 24.820, "amplitude": 40.471, "phase_angle": 18.900, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.236, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 203.044, 270.408, 183.896 ], "x_axis": [ 0.613, 0.714, -0.337 ], "y_axis": [ 0.498, -0.018, 0.867 ], "z_axis": [ 0.614, -0.699, -0.366 ], "quaternion": [ 0.554, 0.707, 0.429, 0.098 ] } }, { "index": 1715, "index_chain": 189, "chain_name": "A", "nt_resnum": 190, "nt_name": "A", "nt_code": "A", "nt_id": "///A/190", "linked_nts": [ "///A/189", "///A/191" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -107.584, "beta": 77.525, "gamma": 156.357, "delta": 79.075, "epsilon": -104.708, "zeta": -101.570, "epsilon_zeta": -3.138, "bb_type": "--", "chi": -176.115, "glyco_bond": "anti", "C5prime_xyz": [ -1.307, 8.438, 1.549 ], "P_xyz": [ -1.366, 10.252, -0.333 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -165.217, "theta": 168.467, "eta_prime": 170.572, "theta_prime": -174.210, "eta_base": 145.672, "theta_base": -125.959, "v0": 3.480, "v1": -25.870, "v2": 37.334, "v3": -36.289, "v4": 20.683, "amplitude": 38.398, "phase_angle": 13.517, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.186, "filter_rmsd": 0.044, "frame": { "rmsd": 0.017, "origin": [ 198.611, 260.485, 186.273 ], "x_axis": [ -0.041, 0.395, -0.918 ], "y_axis": [ 0.871, 0.464, 0.161 ], "z_axis": [ 0.490, -0.793, -0.363 ], "quaternion": [ 0.515, 0.463, 0.683, -0.231 ] } }, { "index": 1716, "index_chain": 190, "chain_name": "A", "nt_resnum": 191, "nt_name": "A", "nt_code": "A", "nt_id": "///A/191", "linked_nts": [ "///A/190", "///A/192" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -47.744, "beta": 137.894, "gamma": 55.673, "delta": 77.573, "epsilon": -150.436, "zeta": -87.105, "epsilon_zeta": -63.332, "bb_type": "BI", "chi": -160.110, "glyco_bond": "anti", "C5prime_xyz": [ -1.305, 8.720, 0.509 ], "P_xyz": [ 1.180, 8.727, -0.223 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.859, "theta": -153.316, "eta_prime": 178.407, "theta_prime": -157.549, "eta_base": -123.051, "theta_base": -147.902, "v0": 2.162, "v1": -26.265, "v2": 39.095, "v3": -38.643, "v4": 23.090, "amplitude": 40.565, "phase_angle": 15.473, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.760, "filter_rmsd": 0.043, "frame": { "rmsd": 0.017, "origin": [ 200.035, 258.595, 183.319 ], "x_axis": [ 0.538, 0.624, -0.567 ], "y_axis": [ 0.757, -0.061, 0.651 ], "z_axis": [ 0.372, -0.779, -0.505 ], "quaternion": [ 0.493, 0.725, 0.476, -0.067 ] } }, { "index": 1717, "index_chain": 191, "chain_name": "A", "nt_resnum": 192, "nt_name": "C", "nt_code": "C", "nt_id": "///A/192", "linked_nts": [ "///A/191", "///A/193" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -51.995, "beta": 155.603, "gamma": 61.447, "delta": 81.470, "epsilon": -137.367, "zeta": -40.865, "epsilon_zeta": -96.502, "bb_type": "BI", "chi": -155.764, "glyco_bond": "anti", "C5prime_xyz": [ -1.383, 8.788, 0.291 ], "P_xyz": [ 1.152, 9.029, -0.256 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.741, "theta": -103.951, "eta_prime": -171.065, "theta_prime": -101.918, "eta_base": -148.221, "theta_base": -62.586, "v0": 2.095, "v1": -24.438, "v2": 36.404, "v3": -35.959, "v4": 21.535, "amplitude": 37.769, "phase_angle": 15.447, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.623, "filter_rmsd": 0.072, "frame": { "rmsd": 0.019, "origin": [ 199.917, 256.167, 180.800 ], "x_axis": [ 0.801, 0.498, -0.331 ], "y_axis": [ 0.556, -0.416, 0.719 ], "z_axis": [ 0.221, -0.760, -0.611 ], "quaternion": [ 0.440, 0.841, 0.313, -0.033 ] } }, { "index": 1718, "index_chain": 192, "chain_name": "A", "nt_resnum": 193, "nt_name": "U", "nt_code": "U", "nt_id": "///A/193", "linked_nts": [ "///A/192", "///A/194" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -84.007, "beta": 169.853, "gamma": 76.285, "delta": 76.393, "epsilon": -156.376, "zeta": -75.969, "epsilon_zeta": -80.407, "bb_type": "BI", "chi": -159.251, "glyco_bond": "anti", "C5prime_xyz": [ -1.776, 8.829, 0.446 ], "P_xyz": [ 0.680, 9.579, -0.003 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.569, "theta": -127.386, "eta_prime": -161.894, "theta_prime": -135.731, "eta_base": -92.582, "theta_base": -105.470, "v0": -2.029, "v1": -22.745, "v2": 37.732, "v3": -39.814, "v4": 26.363, "amplitude": 40.521, "phase_angle": 21.379, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.098, "filter_rmsd": 0.101, "frame": { "rmsd": 0.014, "origin": [ 206.507, 255.810, 179.442 ], "x_axis": [ 0.788, -0.014, 0.616 ], "y_axis": [ -0.403, -0.767, 0.498 ], "z_axis": [ 0.466, -0.641, -0.610 ], "quaternion": [ 0.320, 0.890, -0.117, 0.304 ] } }, { "index": 1719, "index_chain": 193, "chain_name": "A", "nt_resnum": 194, "nt_name": "G", "nt_code": "G", "nt_id": "///A/194", "linked_nts": [ "///A/193", "///A/195" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix-end,multiplet", "alpha": 178.568, "beta": -155.883, "gamma": 150.934, "delta": 76.303, "epsilon": -110.679, "zeta": -75.823, "epsilon_zeta": -34.856, "bb_type": "--", "chi": 179.370, "glyco_bond": "anti", "C5prime_xyz": [ -1.594, 8.544, 1.688 ], "P_xyz": [ 0.560, 9.819, 1.039 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.040, "theta": -131.325, "eta_prime": 178.063, "theta_prime": -126.776, "eta_base": -134.019, "theta_base": -75.141, "v0": -0.729, "v1": -23.540, "v2": 37.742, "v3": -39.132, "v4": 25.137, "amplitude": 40.074, "phase_angle": 19.642, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.036, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 210.906, 253.825, 178.380 ], "x_axis": [ 0.137, -0.243, 0.960 ], "y_axis": [ -0.845, -0.534, -0.014 ], "z_axis": [ 0.516, -0.810, -0.279 ], "quaternion": [ 0.285, 0.698, -0.389, 0.529 ] } }, { "index": 1720, "index_chain": 194, "chain_name": "A", "nt_resnum": 195, "nt_name": "A", "nt_code": "A", "nt_id": "///A/195", "linked_nts": [ "///A/194", "///A/196" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -50.803, "beta": 158.768, "gamma": 53.014, "delta": 80.437, "epsilon": -145.873, "zeta": 75.029, "epsilon_zeta": 139.097, "bb_type": "--", "chi": -148.116, "glyco_bond": "anti", "C5prime_xyz": [ -1.740, 8.843, -0.268 ], "P_xyz": [ 0.773, 9.461, -0.572 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.789, "theta": -13.860, "eta_prime": -172.319, "theta_prime": -31.059, "eta_base": -103.791, "theta_base": -67.597, "v0": -6.311, "v1": -16.992, "v2": 32.393, "v3": -37.010, "v4": 27.399, "amplitude": 36.798, "phase_angle": 28.321, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.271, "filter_rmsd": 0.043, "frame": { "rmsd": 0.019, "origin": [ 212.199, 250.463, 181.082 ], "x_axis": [ -0.640, -0.499, 0.584 ], "y_axis": [ -0.462, -0.357, -0.812 ], "z_axis": [ 0.614, -0.790, -0.002 ], "quaternion": [ -0.013, 0.424, -0.567, 0.706 ] } }, { "index": 1721, "index_chain": 195, "chain_name": "A", "nt_resnum": 196, "nt_name": "A", "nt_code": "A", "nt_id": "///A/196", "linked_nts": [ "///A/195", "///A/197" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-canonical,multiplet", "alpha": -144.925, "beta": 125.135, "gamma": -136.920, "delta": 134.522, "epsilon": -108.716, "zeta": -70.779, "epsilon_zeta": -37.936, "bb_type": "--", "chi": 80.847, "glyco_bond": "syn", "C5prime_xyz": [ -5.015, 5.240, 2.216 ], "P_xyz": [ -6.792, 6.118, 3.901 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -70.064, "theta": -122.358, "eta_prime": -41.319, "theta_prime": -111.245, "eta_base": 5.656, "theta_base": -76.369, "v0": -26.074, "v1": 33.879, "v2": -28.318, "v3": 14.145, "v4": 7.305, "amplitude": 33.162, "phase_angle": 148.641, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.051, "frame": { "rmsd": 0.022, "origin": [ 208.867, 236.778, 171.396 ], "x_axis": [ -0.850, -0.339, -0.403 ], "y_axis": [ -0.477, 0.819, 0.318 ], "z_axis": [ 0.223, 0.462, -0.858 ], "quaternion": [ 0.167, -0.217, 0.939, 0.208 ] } }, { "index": 1722, "index_chain": 196, "chain_name": "A", "nt_resnum": 197, "nt_name": "A", "nt_code": "A", "nt_id": "///A/197", "linked_nts": [ "///A/196", "///A/198" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -81.100, "beta": -150.491, "gamma": 77.513, "delta": 78.907, "epsilon": -128.091, "zeta": -58.552, "epsilon_zeta": -69.539, "bb_type": "BI", "chi": 176.265, "glyco_bond": "anti", "C5prime_xyz": [ -1.486, 8.345, 1.881 ], "P_xyz": [ 0.932, 8.283, 2.865 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -169.617, "theta": -114.878, "eta_prime": -137.119, "theta_prime": -109.217, "eta_base": -134.540, "theta_base": -54.716, "v0": 2.335, "v1": -25.446, "v2": 37.639, "v3": -37.196, "v4": 22.023, "amplitude": 39.000, "phase_angle": 15.184, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.142, "filter_rmsd": 0.047, "frame": { "rmsd": 0.015, "origin": [ 218.270, 245.241, 180.805 ], "x_axis": [ 0.253, 0.307, -0.917 ], "y_axis": [ -0.848, -0.386, -0.363 ], "z_axis": [ -0.465, 0.870, 0.163 ], "quaternion": [ 0.508, -0.607, 0.223, 0.569 ] } }, { "index": 1723, "index_chain": 197, "chain_name": "A", "nt_resnum": 198, "nt_name": "C", "nt_code": "C", "nt_id": "///A/198", "linked_nts": [ "///A/197", "///A/199" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end", "alpha": -77.932, "beta": 171.666, "gamma": 68.236, "delta": 84.920, "epsilon": -145.529, "zeta": -114.645, "epsilon_zeta": -30.884, "bb_type": "BI", "chi": -156.611, "glyco_bond": "anti", "C5prime_xyz": [ -1.347, 8.749, 0.383 ], "P_xyz": [ 1.233, 9.042, 0.257 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.654, "theta": -152.007, "eta_prime": -168.748, "theta_prime": -178.403, "eta_base": -90.746, "theta_base": 117.796, "v0": 3.053, "v1": -24.001, "v2": 34.662, "v3": -33.783, "v4": 19.429, "amplitude": 35.689, "phase_angle": 13.777, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.466, "filter_rmsd": 0.072, "frame": { "rmsd": 0.021, "origin": [ 217.022, 248.652, 177.443 ], "x_axis": [ -0.655, -0.141, -0.742 ], "y_axis": [ -0.683, -0.309, 0.662 ], "z_axis": [ -0.323, 0.940, 0.107 ], "quaternion": [ 0.188, -0.370, 0.557, 0.720 ] } }, { "index": 1724, "index_chain": 198, "chain_name": "A", "nt_resnum": 199, "nt_name": "A", "nt_code": "A", "nt_id": "///A/199", "linked_nts": [ "///A/198", "///A/200" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical", "alpha": 82.668, "beta": -168.024, "gamma": -154.370, "delta": 141.219, "epsilon": -104.077, "zeta": -86.913, "epsilon_zeta": -17.165, "bb_type": "--", "chi": -98.056, "glyco_bond": "anti", "C5prime_xyz": [ -2.734, 8.015, -2.117 ], "P_xyz": [ -2.427, 8.696, -4.587 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.380, "theta": -128.273, "eta_prime": 144.785, "theta_prime": -123.005, "eta_base": 90.381, "theta_base": -87.104, "v0": -25.324, "v1": 36.681, "v2": -33.452, "v3": 19.599, "v4": 3.349, "amplitude": 36.607, "phase_angle": 156.039, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.014, "origin": [ 222.165, 248.059, 186.786 ], "x_axis": [ 0.169, -0.707, -0.686 ], "y_axis": [ -0.694, 0.409, -0.593 ], "z_axis": [ 0.700, 0.577, -0.421 ], "quaternion": [ 0.538, -0.544, 0.644, -0.006 ] } }, { "index": 1725, "index_chain": 199, "chain_name": "A", "nt_resnum": 200, "nt_name": "U", "nt_code": "U", "nt_id": "///A/200", "linked_nts": [ "///A/199", "///A/201" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -74.582, "beta": 169.768, "gamma": 48.554, "delta": 77.959, "epsilon": -137.027, "zeta": -40.160, "epsilon_zeta": -96.867, "bb_type": "BI", "chi": -163.220, "glyco_bond": "anti", "C5prime_xyz": [ -1.679, 8.818, 0.651 ], "P_xyz": [ 0.726, 9.688, 1.036 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 147.060, "theta": -110.482, "eta_prime": -178.328, "theta_prime": -104.125, "eta_base": -144.994, "theta_base": -55.620, "v0": -3.673, "v1": -20.762, "v2": 35.749, "v3": -38.915, "v4": 26.890, "amplitude": 39.097, "phase_angle": 23.883, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.622, "filter_rmsd": 0.101, "frame": { "rmsd": 0.017, "origin": [ 217.385, 254.213, 175.525 ], "x_axis": [ -0.705, -0.696, 0.134 ], "y_axis": [ 0.005, 0.184, 0.983 ], "z_axis": [ -0.709, 0.694, -0.126 ], "quaternion": [ -0.297, -0.244, 0.710, 0.591 ] } }, { "index": 1726, "index_chain": 200, "chain_name": "A", "nt_resnum": 201, "nt_name": "C", "nt_code": "C", "nt_id": "///A/201", "linked_nts": [ "///A/200", "///A/202" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix-end,multiplet", "alpha": -93.171, "beta": 170.509, "gamma": 82.436, "delta": 79.779, "epsilon": -161.412, "zeta": -77.951, "epsilon_zeta": -83.461, "bb_type": "BI", "chi": -160.018, "glyco_bond": "anti", "C5prime_xyz": [ -1.570, 8.861, 0.482 ], "P_xyz": [ 0.885, 9.544, -0.035 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.744, "theta": -126.236, "eta_prime": -163.058, "theta_prime": -131.654, "eta_base": -89.672, "theta_base": -90.687, "v0": -2.835, "v1": -20.763, "v2": 35.094, "v3": -37.669, "v4": 25.595, "amplitude": 38.060, "phase_angle": 22.770, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.010, "filter_rmsd": 0.067, "frame": { "rmsd": 0.016, "origin": [ 211.501, 252.973, 179.048 ], "x_axis": [ -0.120, -0.162, 0.980 ], "y_axis": [ 0.523, 0.828, 0.201 ], "z_axis": [ -0.844, 0.536, -0.015 ], "quaternion": [ 0.651, -0.129, -0.701, -0.263 ] } }, { "index": 1727, "index_chain": 201, "chain_name": "A", "nt_resnum": 202, "nt_name": "U", "nt_code": "U", "nt_id": "///A/202", "linked_nts": [ "///A/201", "///A/203" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": 172.188, "beta": -143.328, "gamma": 155.166, "delta": 84.092, "epsilon": -110.935, "zeta": -78.149, "epsilon_zeta": -32.786, "bb_type": "--", "chi": -172.412, "glyco_bond": "anti", "C5prime_xyz": [ -1.324, 8.598, 1.298 ], "P_xyz": [ 1.031, 9.281, 0.412 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.624, "theta": -128.805, "eta_prime": -168.017, "theta_prime": -128.340, "eta_base": -109.841, "theta_base": -77.617, "v0": -0.594, "v1": -20.280, "v2": 32.217, "v3": -33.471, "v4": 21.560, "amplitude": 34.203, "phase_angle": 19.620, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.154, "filter_rmsd": 0.110, "frame": { "rmsd": 0.021, "origin": [ 208.113, 254.960, 182.197 ], "x_axis": [ 0.500, 0.420, 0.757 ], "y_axis": [ 0.402, 0.661, -0.633 ], "z_axis": [ -0.767, 0.621, 0.161 ], "quaternion": [ 0.762, -0.411, -0.500, 0.006 ] } }, { "index": 1728, "index_chain": 202, "chain_name": "A", "nt_resnum": 203, "nt_name": "A", "nt_code": "A", "nt_id": "///A/203", "linked_nts": [ "///A/202", "///A/204" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -59.009, "beta": 148.049, "gamma": 55.926, "delta": 79.288, "epsilon": -139.236, "zeta": 29.297, "epsilon_zeta": 191.467, "bb_type": "--", "chi": -155.209, "glyco_bond": "anti", "C5prime_xyz": [ -1.461, 8.736, 0.181 ], "P_xyz": [ 1.077, 8.962, -0.420 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 150.109, "theta": -23.956, "eta_prime": 178.598, "theta_prime": -66.660, "eta_base": -109.267, "theta_base": -107.571, "v0": -0.030, "v1": -23.422, "v2": 36.701, "v3": -37.644, "v4": 23.802, "amplitude": 38.728, "phase_angle": 18.618, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.810, "filter_rmsd": 0.038, "frame": { "rmsd": 0.021, "origin": [ 207.470, 258.882, 183.936 ], "x_axis": [ 0.674, 0.738, -0.037 ], "y_axis": [ -0.263, 0.193, -0.945 ], "z_axis": [ -0.690, 0.647, 0.324 ], "quaternion": [ 0.740, -0.538, -0.220, 0.338 ] } }, { "index": 1729, "index_chain": 203, "chain_name": "A", "nt_resnum": 204, "nt_name": "A", "nt_code": "A", "nt_id": "///A/204", "linked_nts": [ "///A/203", "///A/205" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": 152.985, "beta": 156.156, "gamma": 64.957, "delta": 147.926, "epsilon": -77.031, "zeta": 118.170, "epsilon_zeta": 164.799, "bb_type": "--", "chi": -136.081, "glyco_bond": "anti", "C5prime_xyz": [ -2.066, 8.696, -0.402 ], "P_xyz": [ 0.408, 9.247, 0.257 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 63.482, "theta": 168.212, "eta_prime": 122.956, "theta_prime": 137.505, "eta_base": 120.717, "theta_base": 148.482, "v0": -24.942, "v1": 39.021, "v2": -37.324, "v3": 23.938, "v4": 0.385, "amplitude": 39.566, "phase_angle": 160.618, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "5z", "suiteness": 0.404, "filter_rmsd": 0.040, "frame": { "rmsd": 0.018, "origin": [ 206.880, 262.271, 185.144 ], "x_axis": [ -0.469, -0.766, 0.439 ], "y_axis": [ -0.639, -0.049, -0.768 ], "z_axis": [ 0.610, -0.641, -0.466 ], "quaternion": [ 0.062, -0.511, 0.687, -0.513 ] } }, { "index": 1730, "index_chain": 204, "chain_name": "A", "nt_resnum": 205, "nt_name": "G", "nt_code": "G", "nt_id": "///A/205", "linked_nts": [ "///A/204", "///A/206" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": 57.329, "beta": -124.481, "gamma": -88.212, "delta": 147.421, "epsilon": -121.075, "zeta": 85.011, "epsilon_zeta": 153.915, "bb_type": "--", "chi": -82.814, "glyco_bond": "anti", "C5prime_xyz": [ -3.815, 7.440, -2.374 ], "P_xyz": [ -5.590, 8.049, -4.217 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -69.304, "theta": 43.122, "eta_prime": -96.090, "theta_prime": 67.009, "eta_base": -108.555, "theta_base": 89.427, "v0": -31.208, "v1": 44.136, "v2": -39.140, "v3": 22.284, "v4": 5.289, "amplitude": 43.490, "phase_angle": 154.155, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 208.509, 267.716, 186.620 ], "x_axis": [ 0.774, 0.591, 0.226 ], "y_axis": [ -0.205, 0.572, -0.794 ], "z_axis": [ -0.599, 0.568, 0.564 ], "quaternion": [ 0.853, -0.399, -0.242, 0.233 ] } }, { "index": 1731, "index_chain": 205, "chain_name": "A", "nt_resnum": 206, "nt_name": "U", "nt_code": "U", "nt_id": "///A/206", "linked_nts": [ "///A/205", "///A/207" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": 170.640, "beta": -125.673, "gamma": 93.954, "delta": 79.758, "epsilon": -149.355, "zeta": -70.184, "epsilon_zeta": -79.171, "bb_type": "BI", "chi": -166.423, "glyco_bond": "anti", "C5prime_xyz": [ -1.476, 8.722, 0.881 ], "P_xyz": [ 1.106, 8.480, 1.254 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.003, "theta": -132.947, "eta_prime": 144.523, "theta_prime": -133.562, "eta_base": 149.558, "theta_base": -109.253, "v0": 0.224, "v1": -23.618, "v2": 36.617, "v3": -37.406, "v4": 23.441, "amplitude": 38.541, "phase_angle": 18.178, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.099, "frame": { "rmsd": 0.016, "origin": [ 202.330, 262.709, 185.495 ], "x_axis": [ 0.735, 0.552, 0.395 ], "y_axis": [ -0.115, 0.675, -0.729 ], "z_axis": [ -0.669, 0.490, 0.559 ], "quaternion": [ 0.861, -0.354, -0.309, 0.193 ] } }, { "index": 1732, "index_chain": 206, "chain_name": "A", "nt_resnum": 207, "nt_name": "A", "nt_code": "A", "nt_id": "///A/207", "linked_nts": [ "///A/206", "///A/208" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -75.024, "beta": -176.858, "gamma": 62.419, "delta": 83.973, "epsilon": -130.331, "zeta": -65.161, "epsilon_zeta": -65.170, "bb_type": "BI", "chi": -166.398, "glyco_bond": "anti", "C5prime_xyz": [ -1.426, 8.670, 0.898 ], "P_xyz": [ 1.125, 9.032, 1.433 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.889, "theta": -121.650, "eta_prime": -171.720, "theta_prime": -117.911, "eta_base": -132.943, "theta_base": -65.713, "v0": 0.255, "v1": -21.697, "v2": 33.718, "v3": -34.358, "v4": 21.552, "amplitude": 35.477, "phase_angle": 18.120, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.790, "filter_rmsd": 0.048, "frame": { "rmsd": 0.016, "origin": [ 200.629, 264.918, 189.328 ], "x_axis": [ 0.660, 0.702, -0.267 ], "y_axis": [ -0.481, 0.121, -0.869 ], "z_axis": [ -0.578, 0.701, 0.417 ], "quaternion": [ 0.741, -0.529, -0.105, 0.399 ] } }, { "index": 1733, "index_chain": 207, "chain_name": "A", "nt_resnum": 208, "nt_name": "C", "nt_code": "C", "nt_id": "///A/208", "linked_nts": [ "///A/207", "///A/209" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -73.385, "beta": 159.629, "gamma": 68.455, "delta": 81.221, "epsilon": -142.273, "zeta": -83.587, "epsilon_zeta": -58.687, "bb_type": "BI", "chi": -157.850, "glyco_bond": "anti", "C5prime_xyz": [ -1.392, 8.790, 0.396 ], "P_xyz": [ 1.132, 9.119, -0.185 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.713, "theta": -145.739, "eta_prime": -173.284, "theta_prime": -146.065, "eta_base": -99.696, "theta_base": -119.024, "v0": 1.030, "v1": -23.667, "v2": 36.070, "v3": -36.313, "v4": 22.337, "amplitude": 37.719, "phase_angle": 17.006, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.517, "filter_rmsd": 0.069, "frame": { "rmsd": 0.014, "origin": [ 200.653, 269.611, 188.634 ], "x_axis": [ 0.007, 0.476, -0.879 ], "y_axis": [ -0.907, -0.368, -0.207 ], "z_axis": [ -0.422, 0.799, 0.429 ], "quaternion": [ 0.517, -0.486, 0.221, 0.669 ] } }, { "index": 1734, "index_chain": 208, "chain_name": "A", "nt_resnum": 209, "nt_name": "C", "nt_code": "C", "nt_id": "///A/209", "linked_nts": [ "///A/208", "///A/210" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -48.755, "beta": 162.956, "gamma": 49.781, "delta": 79.853, "epsilon": -150.722, "zeta": -90.729, "epsilon_zeta": -59.993, "bb_type": "BI", "chi": -157.625, "glyco_bond": "anti", "C5prime_xyz": [ -1.338, 8.795, 0.423 ], "P_xyz": [ 1.258, 9.078, 0.515 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.617, "theta": -128.915, "eta_prime": -173.568, "theta_prime": -137.268, "eta_base": -132.621, "theta_base": -125.077, "v0": 0.512, "v1": -22.801, "v2": 35.419, "v3": -36.037, "v4": 22.450, "amplitude": 37.217, "phase_angle": 17.883, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.694, "filter_rmsd": 0.069, "frame": { "rmsd": 0.014, "origin": [ 199.616, 273.634, 189.208 ], "x_axis": [ -0.431, 0.038, -0.902 ], "y_axis": [ -0.755, -0.562, 0.337 ], "z_axis": [ -0.494, 0.826, 0.271 ], "quaternion": [ 0.264, -0.464, 0.387, 0.752 ] } }, { "index": 1735, "index_chain": 209, "chain_name": "A", "nt_resnum": 210, "nt_name": "C", "nt_code": "C", "nt_id": "///A/210", "linked_nts": [ "///A/209", "///A/211" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 160.004, "beta": -151.582, "gamma": 168.425, "delta": 79.940, "epsilon": -131.880, "zeta": -77.587, "epsilon_zeta": -54.293, "bb_type": "BI", "chi": -170.167, "glyco_bond": "anti", "C5prime_xyz": [ -1.402, 8.689, 1.116 ], "P_xyz": [ 0.350, 10.010, -0.270 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.105, "theta": -155.018, "eta_prime": 175.091, "theta_prime": -151.244, "eta_base": -155.988, "theta_base": -117.266, "v0": -0.311, "v1": -22.824, "v2": 36.075, "v3": -37.218, "v4": 23.678, "amplitude": 38.170, "phase_angle": 19.071, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.522, "filter_rmsd": 0.065, "frame": { "rmsd": 0.010, "origin": [ 198.852, 277.568, 188.746 ], "x_axis": [ -0.571, -0.387, -0.724 ], "y_axis": [ -0.581, -0.432, 0.690 ], "z_axis": [ -0.580, 0.814, 0.022 ], "quaternion": [ 0.068, -0.458, 0.528, 0.712 ] } }, { "index": 1736, "index_chain": 210, "chain_name": "A", "nt_resnum": 211, "nt_name": "U", "nt_code": "U", "nt_id": "///A/211", "linked_nts": [ "///A/210", "///A/212" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -54.110, "beta": 166.811, "gamma": 53.720, "delta": 79.556, "epsilon": -141.153, "zeta": -90.243, "epsilon_zeta": -50.910, "bb_type": "BI", "chi": -160.243, "glyco_bond": "anti", "C5prime_xyz": [ -1.531, 8.755, 0.527 ], "P_xyz": [ 1.018, 9.249, 0.689 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.111, "theta": -126.434, "eta_prime": -170.705, "theta_prime": -140.188, "eta_base": -124.493, "theta_base": -132.251, "v0": -0.496, "v1": -22.805, "v2": 36.205, "v3": -37.474, "v4": 23.959, "amplitude": 38.371, "phase_angle": 19.347, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.772, "filter_rmsd": 0.104, "frame": { "rmsd": 0.013, "origin": [ 195.627, 280.421, 186.885 ], "x_axis": [ -0.734, -0.670, -0.111 ], "y_axis": [ -0.064, -0.095, 0.993 ], "z_axis": [ -0.676, 0.736, 0.027 ], "quaternion": [ -0.223, -0.289, 0.635, 0.681 ] } }, { "index": 1737, "index_chain": 211, "chain_name": "A", "nt_resnum": 212, "nt_name": "G", "nt_code": "G", "nt_id": "///A/212", "linked_nts": [ "///A/211", "///A/213" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 102.167, "beta": -151.626, "gamma": -140.646, "delta": 81.524, "epsilon": -113.779, "zeta": -102.426, "epsilon_zeta": -11.352, "bb_type": "--", "chi": -167.648, "glyco_bond": "anti", "C5prime_xyz": [ -0.960, 8.443, 1.016 ], "P_xyz": [ -0.040, 10.663, 0.025 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.834, "theta": 177.513, "eta_prime": 167.896, "theta_prime": -170.377, "eta_base": -165.324, "theta_base": -142.905, "v0": 9.155, "v1": -30.394, "v2": 39.140, "v3": -34.862, "v4": 16.180, "amplitude": 39.318, "phase_angle": 5.450, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 193.501, 282.173, 184.423 ], "x_axis": [ -0.635, -0.735, 0.239 ], "y_axis": [ 0.080, 0.246, 0.966 ], "z_axis": [ -0.769, 0.632, -0.098 ], "quaternion": [ -0.358, -0.233, 0.703, 0.568 ] } }, { "index": 1738, "index_chain": 212, "chain_name": "A", "nt_resnum": 213, "nt_name": "A", "nt_code": "A", "nt_id": "///A/213", "linked_nts": [ "///A/212", "///A/214" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -43.285, "beta": 137.426, "gamma": 57.989, "delta": 76.756, "epsilon": -149.894, "zeta": -82.617, "epsilon_zeta": -67.277, "bb_type": "BI", "chi": -161.985, "glyco_bond": "anti", "C5prime_xyz": [ -1.742, 8.760, 0.574 ], "P_xyz": [ 0.724, 9.134, -0.165 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.225, "theta": -152.386, "eta_prime": -179.579, "theta_prime": -156.878, "eta_base": -146.385, "theta_base": -142.474, "v0": -0.627, "v1": -23.993, "v2": 38.063, "v3": -39.455, "v4": 25.235, "amplitude": 40.362, "phase_angle": 19.431, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.781, "filter_rmsd": 0.038, "frame": { "rmsd": 0.010, "origin": [ 190.614, 283.092, 183.099 ], "x_axis": [ -0.433, -0.642, 0.633 ], "y_axis": [ 0.165, 0.634, 0.756 ], "z_axis": [ -0.886, 0.432, -0.169 ], "quaternion": [ 0.508, 0.159, -0.748, -0.397 ] } }, { "index": 1739, "index_chain": 213, "chain_name": "A", "nt_resnum": 214, "nt_name": "G", "nt_code": "G", "nt_id": "///A/214", "linked_nts": [ "///A/213", "///A/215" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,multiplet", "alpha": -61.661, "beta": 159.710, "gamma": 68.432, "delta": 79.509, "epsilon": -123.140, "zeta": -84.710, "epsilon_zeta": -38.430, "bb_type": "--", "chi": -149.205, "glyco_bond": "anti", "C5prime_xyz": [ -1.537, 8.852, -0.181 ], "P_xyz": [ 0.851, 9.284, -1.152 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -179.024, "theta": -150.482, "eta_prime": -170.815, "theta_prime": -147.511, "eta_base": -145.533, "theta_base": -148.757, "v0": -0.447, "v1": -23.270, "v2": 36.733, "v3": -37.887, "v4": 24.225, "amplitude": 38.888, "phase_angle": 19.163, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.557, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 187.679, 282.993, 181.553 ], "x_axis": [ -0.486, -0.260, 0.835 ], "y_axis": [ 0.077, 0.938, 0.337 ], "z_axis": [ -0.871, 0.228, -0.436 ], "quaternion": [ 0.504, 0.054, -0.846, -0.167 ] } }, { "index": 1740, "index_chain": 214, "chain_name": "A", "nt_resnum": 215, "nt_name": "G", "nt_code": "G", "nt_id": "///A/215", "linked_nts": [ "///A/214", "///A/216" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BII,non-canonical,helix,multiplet", "alpha": -81.982, "beta": 113.135, "gamma": 134.200, "delta": 151.336, "epsilon": -91.574, "zeta": 165.574, "epsilon_zeta": 102.852, "bb_type": "BII", "chi": -136.382, "glyco_bond": "anti", "C5prime_xyz": [ -2.372, 8.740, -0.359 ], "P_xyz": [ -0.800, 9.419, -2.354 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -89.947, "theta": 94.033, "eta_prime": -112.299, "theta_prime": 116.108, "eta_base": -120.737, "theta_base": 118.748, "v0": -26.553, "v1": 40.917, "v2": -38.522, "v3": 24.264, "v4": 1.239, "amplitude": 41.140, "phase_angle": 159.450, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 184.796, 282.738, 179.966 ], "x_axis": [ -0.320, -0.151, 0.935 ], "y_axis": [ -0.135, 0.984, 0.112 ], "z_axis": [ -0.938, -0.091, -0.336 ], "quaternion": [ 0.576, 0.088, -0.812, -0.007 ] } }, { "index": 1741, "index_chain": 215, "chain_name": "A", "nt_resnum": 216, "nt_name": "A", "nt_code": "A", "nt_id": "///A/216", "linked_nts": [ "///A/215", "///A/217" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -81.339, "beta": 80.625, "gamma": 177.591, "delta": 78.163, "epsilon": -125.590, "zeta": -79.569, "epsilon_zeta": -46.021, "bb_type": "--", "chi": -174.185, "glyco_bond": "anti", "C5prime_xyz": [ -1.499, 8.594, 1.285 ], "P_xyz": [ -2.352, 10.638, -0.140 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -82.413, "theta": 155.221, "eta_prime": -106.994, "theta_prime": 178.821, "eta_base": -111.777, "theta_base": -128.184, "v0": -0.383, "v1": -23.045, "v2": 36.470, "v3": -37.647, "v4": 24.004, "amplitude": 38.607, "phase_angle": 19.155, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.015, "origin": [ 192.071, 281.937, 174.535 ], "x_axis": [ 0.193, -0.128, -0.973 ], "y_axis": [ -0.567, 0.795, -0.217 ], "z_axis": [ 0.801, 0.593, 0.081 ], "quaternion": [ 0.719, -0.282, 0.617, 0.153 ] } }, { "index": 1742, "index_chain": 216, "chain_name": "A", "nt_resnum": 217, "nt_name": "A", "nt_code": "A", "nt_id": "///A/217", "linked_nts": [ "///A/216", "///A/218" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical", "alpha": -70.610, "beta": 152.605, "gamma": 74.211, "delta": 82.627, "epsilon": -120.408, "zeta": -79.915, "epsilon_zeta": -40.492, "bb_type": "--", "chi": -165.028, "glyco_bond": "anti", "C5prime_xyz": [ -1.353, 8.576, 0.817 ], "P_xyz": [ 1.123, 8.865, 0.056 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.832, "theta": -129.853, "eta_prime": -170.948, "theta_prime": -130.227, "eta_base": -112.691, "theta_base": -90.037, "v0": 4.379, "v1": -26.120, "v2": 36.802, "v3": -35.197, "v4": 19.528, "amplitude": 37.634, "phase_angle": 12.073, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.255, "filter_rmsd": 0.039, "frame": { "rmsd": 0.013, "origin": [ 195.377, 283.590, 172.554 ], "x_axis": [ -0.221, 0.497, -0.839 ], "y_axis": [ -0.440, 0.717, 0.541 ], "z_axis": [ 0.870, 0.489, 0.060 ], "quaternion": [ 0.624, 0.021, 0.685, 0.376 ] } }, { "index": 1743, "index_chain": 217, "chain_name": "A", "nt_resnum": 218, "nt_name": "A", "nt_code": "A", "nt_id": "///A/218", "linked_nts": [ "///A/217", "///A/219" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -65.896, "beta": 144.512, "gamma": 75.423, "delta": 81.886, "epsilon": -131.585, "zeta": -65.083, "epsilon_zeta": -66.502, "bb_type": "BI", "chi": -162.478, "glyco_bond": "anti", "C5prime_xyz": [ -1.638, 8.706, 0.662 ], "P_xyz": [ 0.815, 9.104, -0.161 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.403, "theta": -122.720, "eta_prime": -170.696, "theta_prime": -125.341, "eta_base": -109.555, "theta_base": -78.095, "v0": -0.521, "v1": -21.840, "v2": 34.668, "v3": -35.877, "v4": 23.020, "amplitude": 36.755, "phase_angle": 19.402, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.614, "filter_rmsd": 0.039, "frame": { "rmsd": 0.013, "origin": [ 197.137, 286.533, 170.543 ], "x_axis": [ -0.561, 0.792, -0.242 ], "y_axis": [ 0.001, 0.293, 0.956 ], "z_axis": [ 0.828, 0.537, -0.165 ], "quaternion": [ 0.376, 0.279, 0.710, 0.525 ] } }, { "index": 1744, "index_chain": 218, "chain_name": "A", "nt_resnum": 219, "nt_name": "A", "nt_code": "A", "nt_id": "///A/219", "linked_nts": [ "///A/218", "///A/220" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -65.656, "beta": 169.561, "gamma": 51.541, "delta": 80.167, "epsilon": -162.794, "zeta": -82.167, "epsilon_zeta": -80.627, "bb_type": "BI", "chi": -151.138, "glyco_bond": "anti", "C5prime_xyz": [ -1.481, 8.719, 0.023 ], "P_xyz": [ 1.089, 9.174, -0.036 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.479, "theta": -130.810, "eta_prime": -178.271, "theta_prime": -133.451, "eta_base": -107.168, "theta_base": -88.495, "v0": 2.341, "v1": -24.896, "v2": 36.844, "v3": -36.472, "v4": 21.571, "amplitude": 38.180, "phase_angle": 15.199, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.822, "filter_rmsd": 0.039, "frame": { "rmsd": 0.012, "origin": [ 197.540, 291.125, 170.371 ], "x_axis": [ -0.497, 0.544, 0.676 ], "y_axis": [ 0.602, -0.345, 0.720 ], "z_axis": [ 0.625, 0.765, -0.156 ], "quaternion": [ -0.022, 0.501, 0.572, 0.649 ] } }, { "index": 1745, "index_chain": 219, "chain_name": "A", "nt_resnum": 220, "nt_name": "G", "nt_code": "G", "nt_id": "///A/220", "linked_nts": [ "///A/219", "///A/221" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,helix,multiplet", "alpha": -171.975, "beta": -138.351, "gamma": 128.256, "delta": 81.523, "epsilon": -103.166, "zeta": -160.034, "epsilon_zeta": 56.869, "bb_type": "BII", "chi": -157.194, "glyco_bond": "anti", "C5prime_xyz": [ -1.118, 8.767, 0.349 ], "P_xyz": [ 1.203, 8.723, -0.851 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.488, "theta": 166.361, "eta_prime": 179.868, "theta_prime": 174.529, "eta_base": -123.165, "theta_base": 139.263, "v0": 1.963, "v1": -24.385, "v2": 36.319, "v3": -36.163, "v4": 21.604, "amplitude": 37.726, "phase_angle": 15.700, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 198.332, 294.361, 171.968 ], "x_axis": [ -0.040, -0.063, 0.997 ], "y_axis": [ 0.926, -0.378, 0.013 ], "z_axis": [ 0.376, 0.924, 0.073 ], "quaternion": [ -0.405, 0.562, 0.384, 0.611 ] } }, { "index": 1746, "index_chain": 220, "chain_name": "A", "nt_resnum": 221, "nt_name": "A", "nt_code": "A", "nt_id": "///A/221", "linked_nts": [ "///A/220", "///A/222" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -47.950, "beta": 132.131, "gamma": 41.218, "delta": 137.189, "epsilon": -101.027, "zeta": 70.220, "epsilon_zeta": 188.752, "bb_type": "--", "chi": -103.671, "glyco_bond": "anti", "C5prime_xyz": [ -2.823, 8.183, -1.980 ], "P_xyz": [ -0.347, 8.813, -2.431 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -170.935, "theta": 70.563, "eta_prime": -164.094, "theta_prime": 58.941, "eta_base": 158.183, "theta_base": 86.831, "v0": -28.635, "v1": 38.376, "v2": -32.792, "v3": 17.079, "v4": 7.046, "amplitude": 37.657, "phase_angle": 150.552, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "3b", "suiteness": 0.026, "filter_rmsd": 0.039, "frame": { "rmsd": 0.012, "origin": [ 200.538, 296.920, 165.056 ], "x_axis": [ -0.633, -0.075, 0.771 ], "y_axis": [ 0.770, 0.045, 0.637 ], "z_axis": [ -0.083, 0.996, 0.029 ], "quaternion": [ -0.332, 0.271, 0.642, 0.636 ] } }, { "index": 1747, "index_chain": 221, "chain_name": "A", "nt_resnum": 222, "nt_name": "A", "nt_code": "A", "nt_id": "///A/222", "linked_nts": [ "///A/221", "///A/223" ], "nt_type": "RNA", "dbn": ".", "summary": "", "alpha": -141.781, "beta": 148.498, "gamma": 161.592, "delta": 150.317, "epsilon": -105.661, "zeta": -72.975, "epsilon_zeta": -32.685, "bb_type": "--", "chi": -86.375, "glyco_bond": "--", "C5prime_xyz": [ -2.753, 7.496, -2.580 ], "P_xyz": [ -2.277, 7.288, -5.154 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -96.064, "theta": -122.335, "eta_prime": -100.075, "theta_prime": -121.304, "eta_base": -123.447, "theta_base": -122.492, "v0": -21.625, "v1": 37.079, "v2": -37.514, "v3": 26.013, "v4": -2.985, "amplitude": 38.736, "phase_angle": 165.571, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.017, "origin": [ 211.001, 291.460, 160.849 ], "x_axis": [ 0.256, 0.336, -0.906 ], "y_axis": [ 0.560, 0.713, 0.422 ], "z_axis": [ 0.788, -0.616, -0.005 ], "quaternion": [ 0.701, 0.370, 0.605, -0.080 ] } }, { "index": 1748, "index_chain": 222, "chain_name": "A", "nt_resnum": 223, "nt_name": "A", "nt_code": "A", "nt_id": "///A/223", "linked_nts": [ "///A/222", "///A/224" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": -74.227, "beta": 154.758, "gamma": -176.942, "delta": 81.854, "epsilon": -140.292, "zeta": 134.779, "epsilon_zeta": 84.928, "bb_type": "--", "chi": -131.126, "glyco_bond": "anti", "C5prime_xyz": [ -1.872, 8.633, -1.198 ], "P_xyz": [ -2.161, 10.076, -3.361 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -83.151, "theta": 10.846, "eta_prime": -52.491, "theta_prime": 31.642, "eta_base": -24.813, "theta_base": 80.907, "v0": -3.538, "v1": -18.998, "v2": 32.880, "v3": -35.904, "v4": 24.938, "amplitude": 36.035, "phase_angle": 24.154, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "2h", "suiteness": 0.670, "filter_rmsd": 0.041, "frame": { "rmsd": 0.014, "origin": [ 224.513, 295.892, 173.540 ], "x_axis": [ -0.027, -0.595, 0.804 ], "y_axis": [ -0.808, -0.460, -0.368 ], "z_axis": [ 0.589, -0.659, -0.468 ], "quaternion": [ 0.106, 0.689, -0.509, 0.505 ] } }, { "index": 1749, "index_chain": 223, "chain_name": "A", "nt_resnum": 224, "nt_name": "U", "nt_code": "U", "nt_id": "///A/224", "linked_nts": [ "///A/223", "///A/225" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -106.792, "beta": -175.718, "gamma": 68.327, "delta": 78.140, "epsilon": -150.457, "zeta": -70.142, "epsilon_zeta": -80.315, "bb_type": "BI", "chi": -166.125, "glyco_bond": "anti", "C5prime_xyz": [ -1.673, 8.780, 0.847 ], "P_xyz": [ 0.806, 9.523, 1.186 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -170.922, "theta": -117.801, "eta_prime": -165.736, "theta_prime": -128.801, "eta_base": 169.234, "theta_base": -100.255, "v0": -0.846, "v1": -23.016, "v2": 36.707, "v3": -38.158, "v4": 24.559, "amplitude": 39.000, "phase_angle": 19.744, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "9a", "suiteness": 0.063, "filter_rmsd": 0.105, "frame": { "rmsd": 0.011, "origin": [ 215.023, 291.536, 158.306 ], "x_axis": [ 0.791, 0.566, -0.232 ], "y_axis": [ 0.285, -0.005, 0.959 ], "z_axis": [ 0.541, -0.824, -0.165 ], "quaternion": [ 0.636, 0.700, 0.304, 0.111 ] } }, { "index": 1750, "index_chain": 224, "chain_name": "A", "nt_resnum": 225, "nt_name": "C", "nt_code": "C", "nt_id": "///A/225", "linked_nts": [ "///A/224", "///A/226" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 154.795, "beta": -167.109, "gamma": 175.069, "delta": 79.759, "epsilon": -163.616, "zeta": -81.770, "epsilon_zeta": -81.846, "bb_type": "BI", "chi": -161.677, "glyco_bond": "anti", "C5prime_xyz": [ -1.479, 8.814, 0.588 ], "P_xyz": [ -0.279, 10.462, -1.071 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.240, "theta": -149.015, "eta_prime": 176.641, "theta_prime": -144.996, "eta_base": -133.243, "theta_base": -100.642, "v0": 0.311, "v1": -23.785, "v2": 36.840, "v3": -37.562, "v4": 23.477, "amplitude": 38.746, "phase_angle": 18.047, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.859, "filter_rmsd": 0.063, "frame": { "rmsd": 0.010, "origin": [ 217.548, 291.057, 155.737 ], "x_axis": [ 0.787, 0.522, 0.328 ], "y_axis": [ 0.010, -0.543, 0.840 ], "z_axis": [ 0.617, -0.657, -0.433 ], "quaternion": [ 0.450, 0.831, 0.160, 0.284 ] } }, { "index": 1751, "index_chain": 225, "chain_name": "A", "nt_resnum": 226, "nt_name": "A", "nt_code": "A", "nt_id": "///A/226", "linked_nts": [ "///A/225", "///A/227" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": 157.848, "beta": -123.115, "gamma": 168.507, "delta": 85.637, "epsilon": -111.570, "zeta": -92.803, "epsilon_zeta": -18.767, "bb_type": "--", "chi": -178.659, "glyco_bond": "anti", "C5prime_xyz": [ -1.910, 8.607, 1.503 ], "P_xyz": [ 0.265, 9.525, 0.380 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -177.378, "theta": -118.127, "eta_prime": -152.895, "theta_prime": -130.036, "eta_base": -92.487, "theta_base": -57.381, "v0": -7.325, "v1": -13.548, "v2": 27.897, "v3": -32.898, "v4": 25.413, "amplitude": 32.629, "phase_angle": 31.244, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.283, "filter_rmsd": 0.046, "frame": { "rmsd": 0.014, "origin": [ 222.514, 290.589, 155.729 ], "x_axis": [ 0.543, -0.046, 0.838 ], "y_axis": [ -0.526, -0.797, 0.297 ], "z_axis": [ 0.654, -0.602, -0.457 ], "quaternion": [ 0.269, 0.836, -0.171, 0.446 ] } }, { "index": 1752, "index_chain": 226, "chain_name": "A", "nt_resnum": 227, "nt_name": "A", "nt_code": "A", "nt_id": "///A/227", "linked_nts": [ "///A/226", "///A/228" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,non-canonical,multiplet", "alpha": 86.963, "beta": -156.669, "gamma": -122.518, "delta": 132.701, "epsilon": 63.072, "zeta": 77.144, "epsilon_zeta": -14.072, "bb_type": "--", "chi": 49.178, "glyco_bond": "syn", "C5prime_xyz": [ -5.349, 3.558, 0.483 ], "P_xyz": [ -6.947, 2.138, 1.970 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -137.222, "theta": 147.760, "eta_prime": -137.765, "theta_prime": 165.953, "eta_base": -59.991, "theta_base": 175.172, "v0": -17.912, "v1": 28.254, "v2": -27.386, "v3": 17.792, "v4": -0.078, "amplitude": 28.888, "phase_angle": 161.443, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.038, "frame": { "rmsd": 0.019, "origin": [ 223.680, 285.718, 157.207 ], "x_axis": [ 0.471, 0.745, 0.473 ], "y_axis": [ 0.143, 0.464, -0.874 ], "z_axis": [ -0.871, 0.479, 0.112 ], "quaternion": [ 0.715, -0.473, -0.470, 0.210 ] } }, { "index": 1753, "index_chain": 227, "chain_name": "A", "nt_resnum": 228, "nt_name": "C", "nt_code": "C", "nt_id": "///A/228", "linked_nts": [ "///A/227", "///A/229" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack,non-canonical,multiplet", "alpha": 152.608, "beta": 97.349, "gamma": 161.400, "delta": 147.753, "epsilon": -119.779, "zeta": 101.226, "epsilon_zeta": 138.994, "bb_type": "--", "chi": -158.373, "glyco_bond": "anti", "C5prime_xyz": [ -1.687, 8.627, 0.897 ], "P_xyz": [ -0.552, 10.254, -0.806 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -133.363, "theta": 39.628, "eta_prime": -151.997, "theta_prime": 39.088, "eta_base": -148.210, "theta_base": 38.782, "v0": -20.251, "v1": 35.074, "v2": -35.735, "v3": 24.917, "v4": -3.127, "amplitude": 36.818, "phase_angle": 166.069, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.062, "frame": { "rmsd": 0.009, "origin": [ 229.728, 291.424, 153.440 ], "x_axis": [ 0.297, -0.792, 0.533 ], "y_axis": [ -0.569, -0.595, -0.567 ], "z_axis": [ 0.767, -0.135, -0.628 ], "quaternion": [ -0.136, 0.794, -0.429, 0.409 ] } }, { "index": 1754, "index_chain": 228, "chain_name": "A", "nt_resnum": 229, "nt_name": "C", "nt_code": "C", "nt_id": "///A/229", "linked_nts": [ "///A/228", "///A/230" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": 58.505, "beta": -162.020, "gamma": -158.774, "delta": 79.608, "epsilon": -135.837, "zeta": -14.952, "epsilon_zeta": -120.885, "bb_type": "--", "chi": -155.160, "glyco_bond": "anti", "C5prime_xyz": [ -1.553, 8.873, 0.212 ], "P_xyz": [ -0.956, 10.771, -1.497 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 142.867, "theta": -135.442, "eta_prime": 129.418, "theta_prime": -134.919, "eta_base": 132.818, "theta_base": -102.177, "v0": -1.689, "v1": -21.474, "v2": 35.185, "v3": -37.097, "v4": 24.456, "amplitude": 37.712, "phase_angle": 21.092, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "6n", "suiteness": 0.107, "filter_rmsd": 0.063, "frame": { "rmsd": 0.007, "origin": [ 217.145, 286.872, 151.463 ], "x_axis": [ 0.389, 0.345, 0.854 ], "y_axis": [ 0.627, 0.580, -0.520 ], "z_axis": [ -0.675, 0.738, 0.009 ], "quaternion": [ 0.703, -0.447, -0.544, -0.100 ] } }, { "index": 1755, "index_chain": 229, "chain_name": "A", "nt_resnum": 230, "nt_name": "G", "nt_code": "G", "nt_id": "///A/230", "linked_nts": [ "///A/229", "///A/231" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -132.529, "beta": 113.750, "gamma": 160.585, "delta": 78.304, "epsilon": -147.929, "zeta": -74.169, "epsilon_zeta": -73.760, "bb_type": "BI", "chi": -174.420, "glyco_bond": "anti", "C5prime_xyz": [ -1.465, 8.592, 1.340 ], "P_xyz": [ -1.421, 10.782, -0.110 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -179.185, "theta": 160.362, "eta_prime": -159.651, "theta_prime": 176.221, "eta_base": -106.294, "theta_base": -156.096, "v0": 2.812, "v1": -26.453, "v2": 38.730, "v3": -38.087, "v4": 22.234, "amplitude": 40.022, "phase_angle": 14.603, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.011, "frame": { "rmsd": 0.011, "origin": [ 217.202, 290.515, 155.560 ], "x_axis": [ 0.701, 0.596, 0.391 ], "y_axis": [ 0.185, 0.377, -0.908 ], "z_axis": [ -0.689, 0.709, 0.154 ], "quaternion": [ 0.747, -0.541, -0.361, 0.138 ] } }, { "index": 1756, "index_chain": 230, "chain_name": "A", "nt_resnum": 231, "nt_name": "A", "nt_code": "A", "nt_id": "///A/231", "linked_nts": [ "///A/230", "///A/232" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -65.865, "beta": 163.528, "gamma": 74.442, "delta": 81.091, "epsilon": -143.433, "zeta": -60.442, "epsilon_zeta": -82.991, "bb_type": "BI", "chi": -169.678, "glyco_bond": "anti", "C5prime_xyz": [ -1.660, 8.679, 1.051 ], "P_xyz": [ 0.867, 9.319, 0.884 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -179.955, "theta": -102.414, "eta_prime": -165.047, "theta_prime": -110.237, "eta_base": -132.075, "theta_base": -37.614, "v0": -2.153, "v1": -20.106, "v2": 33.468, "v3": -35.621, "v4": 23.841, "amplitude": 36.083, "phase_angle": 21.949, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.343, "filter_rmsd": 0.038, "frame": { "rmsd": 0.011, "origin": [ 214.970, 292.245, 158.287 ], "x_axis": [ 0.607, 0.793, -0.051 ], "y_axis": [ -0.202, 0.092, -0.975 ], "z_axis": [ -0.769, 0.602, 0.216 ], "quaternion": [ 0.692, -0.570, -0.259, 0.360 ] } }, { "index": 1757, "index_chain": 231, "chain_name": "A", "nt_resnum": 232, "nt_name": "G", "nt_code": "G", "nt_id": "///A/232", "linked_nts": [ "///A/231", "///A/233" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BII", "alpha": 156.668, "beta": -176.606, "gamma": -170.407, "delta": 149.357, "epsilon": -115.189, "zeta": 162.903, "epsilon_zeta": 81.909, "bb_type": "BII", "chi": 38.474, "glyco_bond": "syn", "C5prime_xyz": [ -5.645, 4.274, 0.021 ], "P_xyz": [ -6.986, 2.334, 1.141 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -155.687, "theta": 145.556, "eta_prime": -138.085, "theta_prime": 164.705, "eta_base": -57.736, "theta_base": -161.587, "v0": -25.158, "v1": 40.107, "v2": -38.816, "v3": 25.335, "v4": -0.338, "amplitude": 40.892, "phase_angle": 161.664, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "1t", "suiteness": 0.406, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 214.391, 296.442, 154.040 ], "x_axis": [ 0.831, 0.298, 0.470 ], "y_axis": [ -0.424, -0.208, 0.881 ], "z_axis": [ 0.361, -0.932, -0.046 ], "quaternion": [ 0.628, 0.722, -0.044, 0.288 ] } }, { "index": 1758, "index_chain": 232, "chain_name": "A", "nt_resnum": 233, "nt_name": "A", "nt_code": "A", "nt_id": "///A/233", "linked_nts": [ "///A/232", "///A/234" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": 34.513, "beta": 118.427, "gamma": 78.238, "delta": 78.489, "epsilon": -136.979, "zeta": -62.181, "epsilon_zeta": -74.798, "bb_type": "BI", "chi": -172.562, "glyco_bond": "anti", "C5prime_xyz": [ -1.448, 8.599, 1.229 ], "P_xyz": [ 0.815, 8.839, -0.068 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -80.662, "theta": -122.830, "eta_prime": -81.073, "theta_prime": -132.072, "eta_base": -99.010, "theta_base": -101.640, "v0": 1.858, "v1": -25.260, "v2": 37.819, "v3": -37.737, "v4": 22.593, "amplitude": 39.328, "phase_angle": 15.926, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.042, "frame": { "rmsd": 0.010, "origin": [ 199.501, 293.474, 165.462 ], "x_axis": [ -0.613, -0.016, -0.790 ], "y_axis": [ 0.789, 0.044, -0.613 ], "z_axis": [ 0.045, -0.999, -0.015 ], "quaternion": [ 0.323, 0.299, 0.646, -0.623 ] } }, { "index": 1759, "index_chain": 233, "chain_name": "A", "nt_resnum": 234, "nt_name": "U", "nt_code": "U", "nt_id": "///A/234", "linked_nts": [ "///A/233", "///A/235" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -91.221, "beta": 170.003, "gamma": 88.434, "delta": 80.418, "epsilon": -146.274, "zeta": -62.673, "epsilon_zeta": -83.601, "bb_type": "BI", "chi": -151.925, "glyco_bond": "anti", "C5prime_xyz": [ -1.871, 8.847, -0.023 ], "P_xyz": [ 0.418, 9.632, -1.036 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.423, "theta": -135.663, "eta_prime": -169.206, "theta_prime": -136.495, "eta_base": -114.231, "theta_base": -93.787, "v0": -4.098, "v1": -19.612, "v2": 34.333, "v3": -37.620, "v4": 26.258, "amplitude": 37.759, "phase_angle": 24.594, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.099, "frame": { "rmsd": 0.012, "origin": [ 197.226, 290.782, 163.894 ], "x_axis": [ 0.012, -0.080, -0.997 ], "y_axis": [ 0.963, -0.267, 0.033 ], "z_axis": [ -0.268, -0.961, 0.073 ], "quaternion": [ -0.452, -0.549, -0.402, 0.576 ] } }, { "index": 1760, "index_chain": 234, "chain_name": "A", "nt_resnum": 235, "nt_name": "U", "nt_code": "U", "nt_id": "///A/235", "linked_nts": [ "///A/234", "///A/236" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -77.239, "beta": 172.260, "gamma": 63.625, "delta": 78.378, "epsilon": -138.119, "zeta": -74.728, "epsilon_zeta": -63.390, "bb_type": "BI", "chi": -166.616, "glyco_bond": "anti", "C5prime_xyz": [ -1.364, 8.647, 0.916 ], "P_xyz": [ 1.234, 9.022, 0.882 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.389, "theta": -139.720, "eta_prime": -176.526, "theta_prime": -138.116, "eta_base": -114.156, "theta_base": -108.581, "v0": 3.457, "v1": -26.946, "v2": 39.122, "v3": -38.005, "v4": 21.738, "amplitude": 40.267, "phase_angle": 13.695, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.726, "filter_rmsd": 0.111, "frame": { "rmsd": 0.016, "origin": [ 197.640, 286.200, 160.549 ], "x_axis": [ 0.839, 0.050, -0.542 ], "y_axis": [ 0.544, -0.042, 0.838 ], "z_axis": [ 0.019, -0.998, -0.063 ], "quaternion": [ 0.658, 0.697, 0.213, -0.188 ] } }, { "index": 1761, "index_chain": 235, "chain_name": "A", "nt_resnum": 236, "nt_name": "C", "nt_code": "C", "nt_id": "///A/236", "linked_nts": [ "///A/235", "///A/237" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -75.804, "beta": 177.180, "gamma": 63.091, "delta": 80.499, "epsilon": -152.193, "zeta": -82.089, "epsilon_zeta": -70.103, "bb_type": "BI", "chi": -158.990, "glyco_bond": "anti", "C5prime_xyz": [ -1.383, 8.795, 0.466 ], "P_xyz": [ 1.203, 9.225, 0.430 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.792, "theta": -156.597, "eta_prime": 177.916, "theta_prime": -157.649, "eta_base": -137.237, "theta_base": -149.768, "v0": 0.951, "v1": -23.691, "v2": 36.234, "v3": -36.562, "v4": 22.438, "amplitude": 37.915, "phase_angle": 17.125, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.754, "filter_rmsd": 0.067, "frame": { "rmsd": 0.011, "origin": [ 198.571, 283.356, 158.387 ], "x_axis": [ 0.955, 0.271, 0.121 ], "y_axis": [ -0.059, -0.224, 0.973 ], "z_axis": [ 0.291, -0.936, -0.197 ], "quaternion": [ 0.619, 0.771, 0.069, 0.133 ] } }, { "index": 1762, "index_chain": 236, "chain_name": "A", "nt_resnum": 237, "nt_name": "C", "nt_code": "C", "nt_id": "///A/237", "linked_nts": [ "///A/236", "///A/238" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -68.299, "beta": 171.118, "gamma": 60.509, "delta": 78.835, "epsilon": -151.804, "zeta": -68.131, "epsilon_zeta": -83.673, "bb_type": "BI", "chi": -163.241, "glyco_bond": "anti", "C5prime_xyz": [ -1.478, 8.825, 0.661 ], "P_xyz": [ 1.076, 9.389, 0.669 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.931, "theta": -144.679, "eta_prime": 175.996, "theta_prime": -144.101, "eta_base": -165.486, "theta_base": -118.091, "v0": -0.591, "v1": -23.381, "v2": 36.984, "v3": -38.259, "v4": 24.536, "amplitude": 39.202, "phase_angle": 19.364, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.846, "filter_rmsd": 0.068, "frame": { "rmsd": 0.012, "origin": [ 199.011, 280.326, 155.699 ], "x_axis": [ 0.808, 0.350, 0.475 ], "y_axis": [ -0.360, -0.345, 0.867 ], "z_axis": [ 0.467, -0.871, -0.153 ], "quaternion": [ 0.572, 0.759, -0.004, 0.310 ] } }, { "index": 1763, "index_chain": 237, "chain_name": "A", "nt_resnum": 238, "nt_name": "C", "nt_code": "C", "nt_id": "///A/238", "linked_nts": [ "///A/237", "///A/239" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem,multiplet", "alpha": -72.792, "beta": 179.848, "gamma": 59.466, "delta": 78.401, "epsilon": -154.885, "zeta": -80.347, "epsilon_zeta": -74.538, "bb_type": "BI", "chi": -160.768, "glyco_bond": "anti", "C5prime_xyz": [ -1.461, 8.823, 0.551 ], "P_xyz": [ 1.066, 9.404, 0.789 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.422, "theta": -126.865, "eta_prime": -178.057, "theta_prime": -133.718, "eta_base": -137.805, "theta_base": -106.993, "v0": -1.240, "v1": -22.730, "v2": 36.835, "v3": -38.525, "v4": 25.027, "amplitude": 39.289, "phase_angle": 20.356, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.881, "filter_rmsd": 0.065, "frame": { "rmsd": 0.013, "origin": [ 202.311, 278.085, 154.595 ], "x_axis": [ 0.369, 0.253, 0.894 ], "y_axis": [ -0.738, -0.505, 0.448 ], "z_axis": [ 0.564, -0.825, 0.000 ], "quaternion": [ 0.465, 0.684, -0.177, 0.533 ] } }, { "index": 1764, "index_chain": 238, "chain_name": "A", "nt_resnum": 239, "nt_name": "U", "nt_code": "U", "nt_id": "///A/239", "linked_nts": [ "///A/238", "///A/240" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 156.076, "beta": -155.900, "gamma": 178.352, "delta": 83.985, "epsilon": -153.376, "zeta": -84.057, "epsilon_zeta": -69.319, "bb_type": "BI", "chi": -170.528, "glyco_bond": "anti", "C5prime_xyz": [ -1.227, 8.576, 1.186 ], "P_xyz": [ 0.489, 10.088, -0.074 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.980, "theta": -142.281, "eta_prime": -174.908, "theta_prime": -143.655, "eta_base": -128.675, "theta_base": -92.074, "v0": 1.171, "v1": -22.062, "v2": 33.482, "v3": -33.706, "v4": 20.550, "amplitude": 34.966, "phase_angle": 16.755, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.854, "filter_rmsd": 0.108, "frame": { "rmsd": 0.016, "origin": [ 205.970, 276.806, 155.807 ], "x_axis": [ -0.173, 0.032, 0.984 ], "y_axis": [ -0.734, -0.670, -0.107 ], "z_axis": [ 0.657, -0.741, 0.139 ], "quaternion": [ 0.272, 0.583, -0.301, 0.704 ] } }, { "index": 1765, "index_chain": 239, "chain_name": "A", "nt_resnum": 240, "nt_name": "U", "nt_code": "U", "nt_id": "///A/240", "linked_nts": [ "///A/239", "///A/241" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": 171.311, "beta": -134.613, "gamma": 146.897, "delta": 85.374, "epsilon": -89.949, "zeta": -15.122, "epsilon_zeta": -74.826, "bb_type": "--", "chi": -161.981, "glyco_bond": "anti", "C5prime_xyz": [ -1.522, 8.756, 0.600 ], "P_xyz": [ 0.725, 9.127, -0.677 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.470, "theta": -29.326, "eta_prime": -169.175, "theta_prime": -65.772, "eta_base": -104.925, "theta_base": -90.186, "v0": -2.642, "v1": -18.647, "v2": 31.433, "v3": -33.866, "v4": 23.053, "amplitude": 34.129, "phase_angle": 22.924, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.010, "filter_rmsd": 0.105, "frame": { "rmsd": 0.014, "origin": [ 207.205, 274.892, 158.593 ], "x_axis": [ -0.634, -0.487, 0.601 ], "y_axis": [ -0.184, -0.659, -0.729 ], "z_axis": [ 0.751, -0.573, 0.328 ], "quaternion": [ -0.093, 0.417, -0.402, 0.809 ] } }, { "index": 1766, "index_chain": 240, "chain_name": "A", "nt_resnum": 241, "nt_name": "A", "nt_code": "A", "nt_id": "///A/241", "linked_nts": [ "///A/240", "///A/242" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,helix", "alpha": 167.708, "beta": 166.185, "gamma": 79.818, "delta": 142.205, "epsilon": -97.932, "zeta": 131.606, "epsilon_zeta": 130.462, "bb_type": "BII", "chi": -158.176, "glyco_bond": "anti", "C5prime_xyz": [ -2.250, 8.606, 0.748 ], "P_xyz": [ 0.124, 9.087, 1.703 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 64.885, "theta": 168.400, "eta_prime": 118.944, "theta_prime": 146.778, "eta_base": 134.162, "theta_base": 154.249, "v0": -23.751, "v1": 35.081, "v2": -32.475, "v3": 19.585, "v4": 2.328, "amplitude": 35.173, "phase_angle": 157.414, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.037, "frame": { "rmsd": 0.015, "origin": [ 207.778, 271.244, 160.142 ], "x_axis": [ 0.618, 0.785, -0.052 ], "y_axis": [ 0.418, -0.384, -0.824 ], "z_axis": [ -0.666, 0.487, -0.565 ], "quaternion": [ -0.409, 0.801, 0.375, -0.224 ] } }, { "index": 1767, "index_chain": 241, "chain_name": "A", "nt_resnum": 242, "nt_name": "G", "nt_code": "G", "nt_id": "///A/242", "linked_nts": [ "///A/241", "///A/243" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": 61.295, "beta": -94.303, "gamma": -114.286, "delta": 147.938, "epsilon": -142.035, "zeta": 150.395, "epsilon_zeta": 67.570, "bb_type": "--", "chi": -95.160, "glyco_bond": "anti", "C5prime_xyz": [ -3.158, 7.832, -2.205 ], "P_xyz": [ -4.324, 7.644, -4.556 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -60.936, "theta": 44.196, "eta_prime": -93.299, "theta_prime": 70.496, "eta_base": -108.041, "theta_base": 91.459, "v0": -27.101, "v1": 40.981, "v2": -38.310, "v3": 23.706, "v4": 1.884, "amplitude": 41.153, "phase_angle": 158.577, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 206.205, 266.364, 163.467 ], "x_axis": [ -0.791, -0.301, 0.533 ], "y_axis": [ -0.085, -0.808, -0.582 ], "z_axis": [ 0.606, -0.506, 0.614 ], "quaternion": [ -0.060, 0.317, -0.304, 0.896 ] } }, { "index": 1768, "index_chain": 242, "chain_name": "A", "nt_resnum": 243, "nt_name": "U", "nt_code": "U", "nt_id": "///A/243", "linked_nts": [ "///A/242", "///A/244" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -86.950, "beta": 163.554, "gamma": 23.460, "delta": 67.629, "epsilon": 96.779, "zeta": 70.904, "epsilon_zeta": 25.875, "bb_type": "--", "chi": -165.371, "glyco_bond": "anti", "C5prime_xyz": [ -1.393, 8.652, 0.871 ], "P_xyz": [ 1.061, 9.050, 1.666 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.514, "theta": -127.363, "eta_prime": 157.363, "theta_prime": -132.731, "eta_base": 161.978, "theta_base": -110.484, "v0": 4.734, "v1": -29.324, "v2": 41.841, "v3": -40.064, "v4": 22.297, "amplitude": 42.840, "phase_angle": 12.396, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.067, "filter_rmsd": 0.109, "frame": { "rmsd": 0.016, "origin": [ 211.941, 270.009, 159.922 ], "x_axis": [ -0.690, -0.273, 0.670 ], "y_axis": [ -0.120, -0.870, -0.478 ], "z_axis": [ 0.713, -0.410, 0.568 ], "quaternion": [ -0.043, 0.391, -0.251, 0.884 ] } }, { "index": 1769, "index_chain": 243, "chain_name": "A", "nt_resnum": 244, "nt_name": "A", "nt_code": "A", "nt_id": "///A/244", "linked_nts": [ "///A/243", "///A/245" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -160.211, "beta": 167.616, "gamma": 77.072, "delta": 78.146, "epsilon": -148.019, "zeta": -80.912, "epsilon_zeta": -67.107, "bb_type": "BI", "chi": -165.744, "glyco_bond": "anti", "C5prime_xyz": [ -1.874, 8.751, 0.791 ], "P_xyz": [ 0.526, 9.694, 0.483 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 150.986, "theta": -114.602, "eta_prime": 173.358, "theta_prime": -117.293, "eta_base": -147.254, "theta_base": -67.259, "v0": -2.769, "v1": -21.168, "v2": 35.642, "v3": -38.287, "v4": 25.896, "amplitude": 38.622, "phase_angle": 22.655, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.015, "origin": [ 215.028, 269.328, 163.335 ], "x_axis": [ -0.706, -0.655, 0.270 ], "y_axis": [ 0.194, -0.544, -0.816 ], "z_axis": [ 0.681, -0.524, 0.511 ], "quaternion": [ -0.255, 0.286, -0.403, 0.831 ] } }, { "index": 1770, "index_chain": 244, "chain_name": "A", "nt_resnum": 245, "nt_name": "G", "nt_code": "G", "nt_id": "///A/245", "linked_nts": [ "///A/244", "///A/246" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end,multiplet", "alpha": 147.454, "beta": -129.795, "gamma": 167.766, "delta": 79.914, "epsilon": -123.326, "zeta": -86.723, "epsilon_zeta": -36.603, "bb_type": "--", "chi": 179.207, "glyco_bond": "anti", "C5prime_xyz": [ -1.207, 8.393, 1.754 ], "P_xyz": [ 0.876, 9.330, 0.495 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.263, "theta": -145.414, "eta_prime": -169.040, "theta_prime": -145.113, "eta_base": -89.870, "theta_base": -109.523, "v0": 3.926, "v1": -26.516, "v2": 38.011, "v3": -36.625, "v4": 20.711, "amplitude": 39.002, "phase_angle": 12.947, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.369, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 214.345, 263.265, 164.391 ], "x_axis": [ -0.122, -0.757, -0.642 ], "y_axis": [ 0.773, 0.333, -0.540 ], "z_axis": [ 0.622, -0.562, 0.544 ], "quaternion": [ 0.662, 0.009, 0.477, -0.577 ] } }, { "index": 1771, "index_chain": 245, "chain_name": "A", "nt_resnum": 246, "nt_name": "U", "nt_code": "U", "nt_id": "///A/246", "linked_nts": [ "///A/245", "///A/247" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -39.757, "beta": 157.194, "gamma": 43.820, "delta": 80.298, "epsilon": -132.046, "zeta": -71.710, "epsilon_zeta": -60.335, "bb_type": "BI", "chi": -163.795, "glyco_bond": "anti", "C5prime_xyz": [ -1.343, 8.699, 0.730 ], "P_xyz": [ 1.244, 8.881, 1.063 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.879, "theta": -128.727, "eta_prime": -171.772, "theta_prime": -128.876, "eta_base": -119.864, "theta_base": -100.969, "v0": 0.055, "v1": -23.359, "v2": 36.528, "v3": -37.388, "v4": 23.586, "amplitude": 38.513, "phase_angle": 18.475, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.296, "filter_rmsd": 0.106, "frame": { "rmsd": 0.018, "origin": [ 215.657, 259.642, 165.530 ], "x_axis": [ 0.408, -0.305, -0.860 ], "y_axis": [ 0.666, 0.744, 0.053 ], "z_axis": [ 0.624, -0.595, 0.507 ], "quaternion": [ 0.815, 0.198, 0.455, -0.298 ] } }, { "index": 1772, "index_chain": 246, "chain_name": "A", "nt_resnum": 247, "nt_name": "G", "nt_code": "G", "nt_id": "///A/247", "linked_nts": [ "///A/246", "///A/248" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -61.474, "beta": 163.169, "gamma": 56.705, "delta": 76.148, "epsilon": -137.460, "zeta": -94.926, "epsilon_zeta": -42.534, "bb_type": "BI", "chi": -168.305, "glyco_bond": "anti", "C5prime_xyz": [ -1.880, 8.833, 0.915 ], "P_xyz": [ 0.543, 9.739, 1.141 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.250, "theta": 178.715, "eta_prime": -179.350, "theta_prime": 173.507, "eta_base": -132.991, "theta_base": 153.714, "v0": -6.159, "v1": -19.064, "v2": 35.530, "v3": -40.090, "v4": 29.149, "amplitude": 39.968, "phase_angle": 27.256, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.789, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 217.854, 256.267, 165.328 ], "x_axis": [ 0.490, 0.357, -0.796 ], "y_axis": [ 0.326, 0.771, 0.546 ], "z_axis": [ 0.809, -0.527, 0.261 ], "quaternion": [ 0.794, 0.338, 0.505, 0.010 ] } }, { "index": 1773, "index_chain": 247, "chain_name": "A", "nt_resnum": 248, "nt_name": "G", "nt_code": "G", "nt_id": "///A/248", "linked_nts": [ "///A/247", "///A/249" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,canonical,helix-end", "alpha": -57.550, "beta": -118.936, "gamma": -59.434, "delta": 74.008, "epsilon": -155.107, "zeta": 94.424, "epsilon_zeta": 110.469, "bb_type": "--", "chi": -96.048, "glyco_bond": "anti", "C5prime_xyz": [ -2.515, 7.811, -2.741 ], "P_xyz": [ -3.496, 10.030, -3.723 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 124.018, "theta": -60.054, "eta_prime": 99.277, "theta_prime": -48.219, "eta_base": 74.742, "theta_base": -46.567, "v0": -3.616, "v1": -21.678, "v2": 37.283, "v3": -40.398, "v4": 27.730, "amplitude": 40.678, "phase_angle": 23.573, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.023, "frame": { "rmsd": 0.023, "origin": [ 216.642, 249.483, 177.384 ], "x_axis": [ -0.441, -0.500, -0.745 ], "y_axis": [ 0.635, 0.412, -0.653 ], "z_axis": [ 0.634, -0.761, 0.136 ], "quaternion": [ 0.526, 0.051, 0.655, -0.540 ] } }, { "index": 1774, "index_chain": 248, "chain_name": "A", "nt_resnum": 249, "nt_name": "C", "nt_code": "C", "nt_id": "///A/249", "linked_nts": [ "///A/248", "///A/250" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -73.597, "beta": -155.776, "gamma": 40.098, "delta": 138.708, "epsilon": -97.701, "zeta": 70.315, "epsilon_zeta": 191.984, "bb_type": "--", "chi": -147.111, "glyco_bond": "anti", "C5prime_xyz": [ -2.416, 8.895, -0.096 ], "P_xyz": [ -1.507, 10.491, 1.782 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -137.024, "theta": 93.716, "eta_prime": -96.792, "theta_prime": 64.117, "eta_base": -72.765, "theta_base": 57.497, "v0": -29.983, "v1": 40.356, "v2": -34.612, "v3": 18.355, "v4": 6.944, "amplitude": 39.555, "phase_angle": 151.049, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.060, "frame": { "rmsd": 0.014, "origin": [ 223.048, 261.315, 164.418 ], "x_axis": [ 0.351, 0.740, 0.573 ], "y_axis": [ -0.038, -0.601, 0.799 ], "z_axis": [ 0.936, -0.302, -0.183 ], "quaternion": [ 0.377, 0.730, 0.240, 0.517 ] } }, { "index": 1775, "index_chain": 249, "chain_name": "A", "nt_resnum": 250, "nt_name": "G", "nt_code": "G", "nt_id": "///A/250", "linked_nts": [ "///A/249", "///A/251" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": 90.034, "beta": 165.910, "gamma": 172.679, "delta": 82.747, "epsilon": -143.089, "zeta": -66.196, "epsilon_zeta": -76.892, "bb_type": "BI", "chi": -167.624, "glyco_bond": "anti", "C5prime_xyz": [ -1.741, 8.819, 0.882 ], "P_xyz": [ -0.814, 10.916, -0.372 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 123.279, "theta": -171.239, "eta_prime": 113.985, "theta_prime": -162.096, "eta_base": 114.377, "theta_base": -109.106, "v0": -6.252, "v1": -15.998, "v2": 30.717, "v3": -35.143, "v4": 26.158, "amplitude": 34.988, "phase_angle": 28.605, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "6n", "suiteness": 0.260, "filter_rmsd": 0.022, "frame": { "rmsd": 0.022, "origin": [ 215.572, 255.335, 175.404 ], "x_axis": [ 0.359, 0.932, -0.044 ], "y_axis": [ 0.487, -0.227, -0.843 ], "z_axis": [ -0.796, 0.281, -0.536 ], "quaternion": [ -0.386, 0.728, 0.487, -0.289 ] } }, { "index": 1776, "index_chain": 250, "chain_name": "A", "nt_resnum": 251, "nt_name": "A", "nt_code": "A", "nt_id": "///A/251", "linked_nts": [ "///A/250", "///A/252" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -92.917, "beta": 172.390, "gamma": 70.141, "delta": 81.469, "epsilon": -137.975, "zeta": -20.699, "epsilon_zeta": -117.276, "bb_type": "--", "chi": -153.310, "glyco_bond": "anti", "C5prime_xyz": [ -1.247, 8.745, 0.116 ], "P_xyz": [ 1.307, 9.092, -0.328 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.296, "theta": -96.483, "eta_prime": 175.566, "theta_prime": -94.624, "eta_base": -121.611, "theta_base": -69.676, "v0": 0.565, "v1": -23.270, "v2": 35.878, "v3": -36.466, "v4": 22.674, "amplitude": 37.668, "phase_angle": 17.730, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.266, "filter_rmsd": 0.045, "frame": { "rmsd": 0.016, "origin": [ 213.801, 258.020, 173.490 ], "x_axis": [ 0.664, 0.426, -0.614 ], "y_axis": [ -0.070, -0.782, -0.619 ], "z_axis": [ -0.744, 0.455, -0.490 ], "quaternion": [ -0.313, 0.857, 0.104, -0.396 ] } }, { "index": 1777, "index_chain": 251, "chain_name": "A", "nt_resnum": 252, "nt_name": "G", "nt_code": "G", "nt_id": "///A/252", "linked_nts": [ "///A/251", "///A/253" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -116.166, "beta": 138.392, "gamma": 142.959, "delta": 79.409, "epsilon": -144.009, "zeta": -69.224, "epsilon_zeta": -74.785, "bb_type": "BI", "chi": -170.073, "glyco_bond": "anti", "C5prime_xyz": [ -1.871, 8.728, 1.077 ], "P_xyz": [ -0.934, 10.568, -0.517 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -172.786, "theta": -171.703, "eta_prime": -138.357, "theta_prime": -166.219, "eta_base": -83.016, "theta_base": -123.917, "v0": -2.719, "v1": -20.632, "v2": 34.840, "v3": -37.352, "v4": 25.260, "amplitude": 37.746, "phase_angle": 22.630, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 215.532, 260.713, 167.554 ], "x_axis": [ 0.287, -0.191, -0.939 ], "y_axis": [ -0.666, -0.744, -0.052 ], "z_axis": [ -0.689, 0.640, -0.341 ], "quaternion": [ -0.225, 0.770, -0.278, -0.528 ] } }, { "index": 1778, "index_chain": 252, "chain_name": "A", "nt_resnum": 253, "nt_name": "C", "nt_code": "C", "nt_id": "///A/253", "linked_nts": [ "///A/252", "///A/254" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": -69.747, "beta": 171.984, "gamma": 59.308, "delta": 76.810, "epsilon": -160.307, "zeta": -74.062, "epsilon_zeta": -86.244, "bb_type": "BI", "chi": -165.611, "glyco_bond": "anti", "C5prime_xyz": [ -1.478, 8.801, 0.823 ], "P_xyz": [ 1.050, 9.382, 1.008 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.739, "theta": -120.976, "eta_prime": -179.615, "theta_prime": -124.143, "eta_base": -122.483, "theta_base": -78.113, "v0": -0.233, "v1": -24.618, "v2": 38.806, "v3": -39.791, "v4": 25.275, "amplitude": 40.995, "phase_angle": 18.810, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.894, "filter_rmsd": 0.067, "frame": { "rmsd": 0.014, "origin": [ 214.258, 263.282, 164.497 ], "x_axis": [ -0.192, -0.692, -0.695 ], "y_axis": [ -0.685, -0.413, 0.600 ], "z_axis": [ -0.703, 0.592, -0.395 ], "quaternion": [ 0.004, 0.636, -0.542, -0.550 ] } }, { "index": 1779, "index_chain": 253, "chain_name": "A", "nt_resnum": 254, "nt_name": "G", "nt_code": "G", "nt_id": "///A/254", "linked_nts": [ "///A/253", "///A/255" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": 161.312, "beta": -140.738, "gamma": 160.218, "delta": 78.961, "epsilon": -101.995, "zeta": -152.180, "epsilon_zeta": 50.185, "bb_type": "--", "chi": -175.632, "glyco_bond": "anti", "C5prime_xyz": [ -1.217, 8.441, 1.500 ], "P_xyz": [ 0.903, 9.415, 0.323 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.599, "theta": 166.051, "eta_prime": -170.051, "theta_prime": 153.087, "eta_base": -100.751, "theta_base": 145.147, "v0": 4.344, "v1": -26.896, "v2": 38.247, "v3": -36.776, "v4": 20.343, "amplitude": 39.161, "phase_angle": 12.399, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.350, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 211.106, 262.462, 160.844 ], "x_axis": [ -0.701, -0.713, 0.014 ], "y_axis": [ -0.337, 0.349, 0.874 ], "z_axis": [ -0.628, 0.609, -0.485 ], "quaternion": [ -0.202, -0.330, 0.796, 0.466 ] } }, { "index": 1780, "index_chain": 254, "chain_name": "A", "nt_resnum": 255, "nt_name": "A", "nt_code": "A", "nt_id": "///A/255", "linked_nts": [ "///A/254", "///A/256" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": 43.080, "beta": -101.732, "gamma": -121.167, "delta": 84.064, "epsilon": -125.165, "zeta": -78.857, "epsilon_zeta": -46.307, "bb_type": "--", "chi": -176.343, "glyco_bond": "anti", "C5prime_xyz": [ -1.034, 8.213, 1.521 ], "P_xyz": [ -1.081, 10.604, 0.493 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -163.669, "theta": 171.262, "eta_prime": 176.056, "theta_prime": -169.333, "eta_base": 157.448, "theta_base": -118.730, "v0": 9.329, "v1": -29.924, "v2": 38.082, "v3": -33.695, "v4": 15.482, "amplitude": 38.219, "phase_angle": 4.840, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.018, "origin": [ 215.903, 272.198, 158.552 ], "x_axis": [ -0.259, -0.604, -0.754 ], "y_axis": [ -0.775, -0.336, 0.536 ], "z_axis": [ -0.577, 0.723, -0.381 ], "quaternion": [ -0.077, 0.604, -0.571, -0.551 ] } }, { "index": 1781, "index_chain": 255, "chain_name": "A", "nt_resnum": 256, "nt_name": "A", "nt_code": "A", "nt_id": "///A/256", "linked_nts": [ "///A/255", "///A/257" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -59.785, "beta": 152.525, "gamma": 67.297, "delta": 82.229, "epsilon": -143.955, "zeta": -73.719, "epsilon_zeta": -70.236, "bb_type": "BI", "chi": -161.416, "glyco_bond": "anti", "C5prime_xyz": [ -1.417, 8.625, 0.571 ], "P_xyz": [ 1.092, 8.869, -0.154 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.958, "theta": -137.718, "eta_prime": -169.280, "theta_prime": -141.247, "eta_base": -108.634, "theta_base": -116.050, "v0": 3.448, "v1": -25.617, "v2": 36.791, "v3": -35.747, "v4": 20.403, "amplitude": 37.829, "phase_angle": 13.452, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.455, "filter_rmsd": 0.040, "frame": { "rmsd": 0.016, "origin": [ 214.170, 273.115, 155.392 ], "x_axis": [ -0.793, -0.540, -0.284 ], "y_axis": [ -0.502, 0.312, 0.807 ], "z_axis": [ -0.347, 0.782, -0.518 ], "quaternion": [ -0.019, -0.322, 0.810, 0.491 ] } }, { "index": 1782, "index_chain": 256, "chain_name": "A", "nt_resnum": 257, "nt_name": "C", "nt_code": "C", "nt_id": "///A/257", "linked_nts": [ "///A/256", "///A/258" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -61.628, "beta": 170.428, "gamma": 55.305, "delta": 77.998, "epsilon": -126.832, "zeta": -64.855, "epsilon_zeta": -61.977, "bb_type": "BI", "chi": -157.638, "glyco_bond": "anti", "C5prime_xyz": [ -1.491, 8.841, 0.366 ], "P_xyz": [ 1.070, 9.369, 0.290 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.190, "theta": -120.946, "eta_prime": -175.066, "theta_prime": -113.892, "eta_base": -133.759, "theta_base": -71.586, "v0": 0.203, "v1": -23.697, "v2": 37.069, "v3": -37.829, "v4": 23.735, "amplitude": 39.036, "phase_angle": 18.270, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.959, "filter_rmsd": 0.069, "frame": { "rmsd": 0.011, "origin": [ 212.142, 274.464, 152.230 ], "x_axis": [ -0.886, -0.348, 0.307 ], "y_axis": [ 0.016, 0.638, 0.770 ], "z_axis": [ -0.464, 0.687, -0.560 ], "quaternion": [ -0.219, -0.095, 0.878, 0.415 ] } }, { "index": 1783, "index_chain": 257, "chain_name": "A", "nt_resnum": 258, "nt_name": "G", "nt_code": "G", "nt_id": "///A/258", "linked_nts": [ "///A/257", "///A/259" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -59.351, "beta": 158.684, "gamma": 66.618, "delta": 78.662, "epsilon": -136.993, "zeta": -96.450, "epsilon_zeta": -40.543, "bb_type": "BI", "chi": -165.999, "glyco_bond": "anti", "C5prime_xyz": [ -1.549, 8.713, 0.884 ], "P_xyz": [ 1.004, 9.182, 0.518 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.551, "theta": -123.556, "eta_prime": -162.526, "theta_prime": -135.897, "eta_base": -98.335, "theta_base": -112.642, "v0": 1.944, "v1": -24.978, "v2": 37.421, "v3": -37.261, "v4": 22.249, "amplitude": 38.890, "phase_angle": 15.799, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.532, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 206.227, 276.363, 153.612 ], "x_axis": [ -0.326, 0.224, 0.918 ], "y_axis": [ 0.730, 0.677, 0.094 ], "z_axis": [ -0.601, 0.701, -0.384 ], "quaternion": [ -0.492, 0.308, 0.773, 0.257 ] } }, { "index": 1784, "index_chain": 258, "chain_name": "A", "nt_resnum": 259, "nt_name": "G", "nt_code": "G", "nt_id": "///A/259", "linked_nts": [ "///A/258", "///A/260" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem,multiplet", "alpha": 127.402, "beta": -146.300, "gamma": -166.535, "delta": 79.140, "epsilon": -118.261, "zeta": -87.590, "epsilon_zeta": -30.672, "bb_type": "--", "chi": 177.607, "glyco_bond": "anti", "C5prime_xyz": [ -0.876, 8.144, 1.794 ], "P_xyz": [ 0.616, 10.017, 0.774 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.028, "theta": -161.899, "eta_prime": 171.199, "theta_prime": -154.867, "eta_base": -140.836, "theta_base": -129.565, "v0": 10.556, "v1": -32.897, "v2": 41.914, "v3": -36.670, "v4": 16.424, "amplitude": 42.031, "phase_angle": 4.275, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.132, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 202.286, 278.113, 154.086 ], "x_axis": [ 0.221, 0.456, 0.862 ], "y_axis": [ 0.761, 0.472, -0.445 ], "z_axis": [ -0.609, 0.755, -0.243 ], "quaternion": [ 0.602, -0.498, -0.611, -0.127 ] } }, { "index": 1785, "index_chain": 259, "chain_name": "A", "nt_resnum": 260, "nt_name": "G", "nt_code": "G", "nt_id": "///A/260", "linked_nts": [ "///A/259", "///A/261" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -43.495, "beta": 160.803, "gamma": 54.150, "delta": 75.868, "epsilon": -143.209, "zeta": -44.042, "epsilon_zeta": -99.166, "bb_type": "BI", "chi": -167.837, "glyco_bond": "anti", "C5prime_xyz": [ -1.740, 8.810, 0.894 ], "P_xyz": [ 0.782, 9.474, 1.054 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.521, "theta": -120.490, "eta_prime": -171.137, "theta_prime": -130.346, "eta_base": -136.298, "theta_base": -100.747, "v0": -2.255, "v1": -22.850, "v2": 37.924, "v3": -40.225, "v4": 26.785, "amplitude": 40.813, "phase_angle": 21.686, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.315, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 198.945, 280.103, 155.815 ], "x_axis": [ 0.659, 0.531, 0.532 ], "y_axis": [ 0.490, 0.233, -0.840 ], "z_axis": [ -0.570, 0.814, -0.107 ], "quaternion": [ 0.668, -0.619, -0.413, 0.015 ] } }, { "index": 1786, "index_chain": 260, "chain_name": "A", "nt_resnum": 261, "nt_name": "G", "nt_code": "G", "nt_id": "///A/261", "linked_nts": [ "///A/260", "///A/262" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -143.054, "beta": 141.435, "gamma": 142.520, "delta": 79.510, "epsilon": -130.983, "zeta": -79.745, "epsilon_zeta": -51.237, "bb_type": "BI", "chi": -177.174, "glyco_bond": "anti", "C5prime_xyz": [ -1.269, 8.486, 1.510 ], "P_xyz": [ 0.018, 10.352, 0.191 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.405, "theta": -169.659, "eta_prime": 179.935, "theta_prime": -164.190, "eta_base": -128.042, "theta_base": -143.849, "v0": 3.463, "v1": -26.231, "v2": 37.943, "v3": -36.864, "v4": 21.110, "amplitude": 39.039, "phase_angle": 13.614, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 198.310, 283.514, 158.233 ], "x_axis": [ 0.857, 0.515, -0.036 ], "y_axis": [ -0.047, 0.009, -0.999 ], "z_axis": [ -0.514, 0.857, 0.032 ], "quaternion": [ 0.689, -0.674, -0.173, 0.204 ] } }, { "index": 1787, "index_chain": 261, "chain_name": "A", "nt_resnum": 262, "nt_name": "A", "nt_code": "A", "nt_id": "///A/262", "linked_nts": [ "///A/261", "///A/263" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -59.165, "beta": 168.848, "gamma": 56.490, "delta": 77.115, "epsilon": -130.417, "zeta": -61.589, "epsilon_zeta": -68.828, "bb_type": "BI", "chi": -159.472, "glyco_bond": "anti", "C5prime_xyz": [ -1.763, 8.813, 0.402 ], "P_xyz": [ 0.698, 9.658, 0.369 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.500, "theta": -124.096, "eta_prime": -175.872, "theta_prime": -120.289, "eta_base": -148.684, "theta_base": -73.512, "v0": -2.689, "v1": -22.092, "v2": 37.037, "v3": -39.612, "v4": 26.692, "amplitude": 40.050, "phase_angle": 22.365, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.774, "filter_rmsd": 0.042, "frame": { "rmsd": 0.013, "origin": [ 197.426, 286.472, 160.589 ], "x_axis": [ 0.764, 0.415, -0.494 ], "y_axis": [ -0.498, -0.108, -0.860 ], "z_axis": [ -0.410, 0.903, 0.124 ], "quaternion": [ 0.667, -0.661, 0.031, 0.342 ] } }, { "index": 1788, "index_chain": 262, "chain_name": "A", "nt_resnum": 263, "nt_name": "U", "nt_code": "U", "nt_id": "///A/263", "linked_nts": [ "///A/262", "///A/264" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -71.531, "beta": 171.251, "gamma": 57.265, "delta": 78.081, "epsilon": -144.485, "zeta": -68.569, "epsilon_zeta": -75.917, "bb_type": "BI", "chi": -160.003, "glyco_bond": "anti", "C5prime_xyz": [ -1.559, 8.768, 0.502 ], "P_xyz": [ 0.981, 9.373, 0.465 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.304, "theta": -141.013, "eta_prime": -178.746, "theta_prime": -134.760, "eta_base": -112.688, "theta_base": -113.971, "v0": 0.732, "v1": -24.600, "v2": 37.892, "v3": -38.315, "v4": 23.710, "amplitude": 39.724, "phase_angle": 17.465, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.747, "filter_rmsd": 0.105, "frame": { "rmsd": 0.009, "origin": [ 198.766, 290.834, 157.372 ], "x_axis": [ 0.119, -0.237, -0.964 ], "y_axis": [ -0.958, -0.283, -0.048 ], "z_axis": [ -0.262, 0.929, -0.260 ], "quaternion": [ -0.379, 0.645, -0.463, -0.476 ] } }, { "index": 1789, "index_chain": 263, "chain_name": "A", "nt_resnum": 264, "nt_name": "U", "nt_code": "U", "nt_id": "///A/264", "linked_nts": [ "///A/263", "///A/265" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -66.136, "beta": 173.126, "gamma": 77.559, "delta": 132.916, "epsilon": -155.036, "zeta": -115.123, "epsilon_zeta": -39.913, "bb_type": "BI", "chi": -121.778, "glyco_bond": "anti", "C5prime_xyz": [ -2.553, 8.598, -1.239 ], "P_xyz": [ -0.216, 9.618, -1.756 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -177.833, "theta": -174.163, "eta_prime": -146.204, "theta_prime": 135.456, "eta_base": -119.201, "theta_base": 93.560, "v0": -29.085, "v1": 36.380, "v2": -29.438, "v3": 13.412, "v4": 9.632, "amplitude": 35.613, "phase_angle": 145.751, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.293, "filter_rmsd": 0.104, "frame": { "rmsd": 0.010, "origin": [ 199.670, 292.928, 155.382 ], "x_axis": [ -0.275, -0.476, -0.836 ], "y_axis": [ -0.958, 0.205, 0.199 ], "z_axis": [ 0.076, 0.856, -0.512 ], "quaternion": [ 0.323, -0.508, 0.706, 0.374 ] } }, { "index": 1790, "index_chain": 264, "chain_name": "A", "nt_resnum": 265, "nt_name": "A", "nt_code": "A", "nt_id": "///A/265", "linked_nts": [ "///A/264", "///A/266" ], "nt_type": "RNA", "dbn": ".", "summary": "non-canonical,multiplet", "alpha": -45.443, "beta": -95.306, "gamma": -163.694, "delta": 75.692, "epsilon": -142.049, "zeta": -134.312, "epsilon_zeta": -7.737, "bb_type": "--", "chi": -77.748, "glyco_bond": "--", "C5prime_xyz": [ -4.337, 6.840, -2.656 ], "P_xyz": [ -5.523, 4.711, -3.585 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 59.571, "theta": 175.545, "eta_prime": 51.629, "theta_prime": -178.420, "eta_base": 53.685, "theta_base": -178.304, "v0": -17.430, "v1": -8.603, "v2": 29.525, "v3": -40.378, "v4": 36.660, "amplitude": 40.622, "phase_angle": 43.378, "puckering": "C4'-exo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.020, "origin": [ 193.403, 299.880, 167.993 ], "x_axis": [ 0.390, -0.514, 0.764 ], "y_axis": [ 0.860, -0.093, -0.502 ], "z_axis": [ 0.329, 0.853, 0.406 ], "quaternion": [ 0.653, -0.519, -0.167, -0.526 ] } }, { "index": 1791, "index_chain": 265, "chain_name": "A", "nt_resnum": 266, "nt_name": "G", "nt_code": "G", "nt_id": "///A/266", "linked_nts": [ "///A/265", "///A/267" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 100.109, "beta": -66.784, "gamma": -135.637, "delta": 77.120, "epsilon": 165.415, "zeta": 32.394, "epsilon_zeta": 133.021, "bb_type": "--", "chi": -157.149, "glyco_bond": "anti", "C5prime_xyz": [ -1.470, 8.861, 0.269 ], "P_xyz": [ -2.630, 9.868, -1.899 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -76.558, "theta": 163.024, "eta_prime": -101.189, "theta_prime": -176.436, "eta_base": -98.434, "theta_base": -148.910, "v0": 0.429, "v1": -23.660, "v2": 36.422, "v3": -37.134, "v4": 23.351, "amplitude": 38.294, "phase_angle": 17.988, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 202.899, 300.613, 170.966 ], "x_axis": [ 0.905, -0.408, 0.117 ], "y_axis": [ 0.123, -0.013, -0.992 ], "z_axis": [ 0.407, 0.913, 0.038 ], "quaternion": [ 0.695, -0.686, 0.104, -0.191 ] } }, { "index": 1792, "index_chain": 266, "chain_name": "A", "nt_resnum": 267, "nt_name": "C", "nt_code": "C", "nt_id": "///A/267", "linked_nts": [ "///A/266", "///A/268" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -173.544, "beta": 95.440, "gamma": 156.009, "delta": 81.998, "epsilon": -136.640, "zeta": -74.190, "epsilon_zeta": -62.450, "bb_type": "BI", "chi": -165.383, "glyco_bond": "anti", "C5prime_xyz": [ -1.243, 8.715, 0.890 ], "P_xyz": [ -1.276, 10.428, -1.084 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.019, "theta": -158.945, "eta_prime": 177.195, "theta_prime": -158.635, "eta_base": -145.338, "theta_base": -126.582, "v0": 1.767, "v1": -23.335, "v2": 34.846, "v3": -34.678, "v4": 20.746, "amplitude": 36.212, "phase_angle": 15.787, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.069, "frame": { "rmsd": 0.013, "origin": [ 205.418, 302.384, 173.162 ], "x_axis": [ 0.884, -0.357, -0.302 ], "y_axis": [ -0.162, 0.372, -0.914 ], "z_axis": [ 0.438, 0.857, 0.272 ], "quaternion": [ 0.795, -0.557, 0.233, -0.061 ] } }, { "index": 1793, "index_chain": 267, "chain_name": "A", "nt_resnum": 268, "nt_name": "C", "nt_code": "C", "nt_id": "///A/268", "linked_nts": [ "///A/267", "///A/269" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 150.346, "beta": -167.702, "gamma": 175.181, "delta": 77.071, "epsilon": -142.957, "zeta": -82.810, "epsilon_zeta": -60.147, "bb_type": "BI", "chi": -163.483, "glyco_bond": "anti", "C5prime_xyz": [ -1.296, 8.732, 0.757 ], "P_xyz": [ -0.027, 10.424, -0.782 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 142.392, "theta": -179.434, "eta_prime": 166.630, "theta_prime": -174.417, "eta_base": -143.371, "theta_base": -157.574, "v0": 3.980, "v1": -27.723, "v2": 39.822, "v3": -38.476, "v4": 21.702, "amplitude": 40.883, "phase_angle": 13.080, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.545, "filter_rmsd": 0.069, "frame": { "rmsd": 0.012, "origin": [ 209.228, 303.314, 174.378 ], "x_axis": [ 0.505, -0.281, -0.816 ], "y_axis": [ -0.485, 0.689, -0.538 ], "z_axis": [ 0.714, 0.668, 0.212 ], "quaternion": [ 0.776, -0.389, 0.493, 0.066 ] } }, { "index": 1794, "index_chain": 268, "chain_name": "A", "nt_resnum": 269, "nt_name": "C", "nt_code": "C", "nt_id": "///A/269", "linked_nts": [ "///A/268", "///A/270" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix-end", "alpha": -57.292, "beta": 175.245, "gamma": 57.424, "delta": 77.433, "epsilon": -122.819, "zeta": 110.578, "epsilon_zeta": 126.603, "bb_type": "--", "chi": -160.096, "glyco_bond": "anti", "C5prime_xyz": [ -1.371, 8.820, 0.514 ], "P_xyz": [ 1.154, 9.417, 0.600 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -176.973, "theta": 68.273, "eta_prime": -173.244, "theta_prime": 15.342, "eta_base": -156.733, "theta_base": -52.941, "v0": -0.118, "v1": -23.442, "v2": 36.870, "v3": -37.944, "v4": 23.962, "amplitude": 38.943, "phase_angle": 18.779, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.823, "filter_rmsd": 0.071, "frame": { "rmsd": 0.015, "origin": [ 213.364, 304.663, 176.408 ], "x_axis": [ 0.147, -0.116, -0.982 ], "y_axis": [ -0.653, 0.734, -0.184 ], "z_axis": [ 0.743, 0.669, 0.032 ], "quaternion": [ 0.692, -0.308, 0.624, 0.194 ] } }, { "index": 1795, "index_chain": 269, "chain_name": "A", "nt_resnum": 270, "nt_name": "U", "nt_code": "U", "nt_id": "///A/270", "linked_nts": [ "///A/269", "///A/271" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": 83.788, "beta": 155.279, "gamma": 74.280, "delta": 144.830, "epsilon": -148.461, "zeta": 5.099, "epsilon_zeta": 206.440, "bb_type": "--", "chi": -146.809, "glyco_bond": "anti", "C5prime_xyz": [ -1.823, 8.710, 0.189 ], "P_xyz": [ 0.744, 8.880, 0.696 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -2.961, "theta": -7.731, "eta_prime": 69.449, "theta_prime": -33.589, "eta_base": 142.838, "theta_base": -21.099, "v0": -21.345, "v1": 34.343, "v2": -33.528, "v3": 22.129, "v4": -0.701, "amplitude": 35.187, "phase_angle": 162.337, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "5p", "suiteness": 0.051, "filter_rmsd": 0.103, "frame": { "rmsd": 0.003, "origin": [ 211.589, 316.860, 169.065 ], "x_axis": [ 0.668, -0.726, -0.162 ], "y_axis": [ -0.054, -0.265, 0.963 ], "z_axis": [ -0.742, -0.635, -0.217 ], "quaternion": [ 0.545, 0.733, -0.266, -0.308 ] } }, { "index": 1796, "index_chain": 270, "chain_name": "A", "nt_resnum": 271, "nt_name": "U", "nt_code": "U", "nt_id": "///A/271", "linked_nts": [ "///A/270", "///A/272" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -119.894, "beta": 168.044, "gamma": 106.582, "delta": 82.755, "epsilon": -154.819, "zeta": -161.195, "epsilon_zeta": 6.375, "bb_type": "--", "chi": -153.651, "glyco_bond": "anti", "C5prime_xyz": [ -2.110, 8.861, 0.068 ], "P_xyz": [ -0.015, 9.822, -1.184 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.484, "theta": 125.278, "eta_prime": -136.909, "theta_prime": 125.200, "eta_base": -102.411, "theta_base": 137.385, "v0": -6.416, "v1": -16.405, "v2": 31.485, "v3": -36.067, "v4": 26.792, "amplitude": 35.867, "phase_angle": 28.617, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.097, "frame": { "rmsd": 0.012, "origin": [ 205.890, 310.813, 182.797 ], "x_axis": [ 0.136, 0.641, 0.755 ], "y_axis": [ -0.130, 0.767, -0.628 ], "z_axis": [ -0.982, -0.012, 0.188 ], "quaternion": [ 0.723, -0.213, -0.601, 0.266 ] } }, { "index": 1797, "index_chain": 271, "chain_name": "A", "nt_resnum": 272, "nt_name": "A", "nt_code": "A", "nt_id": "///A/272", "linked_nts": [ "///A/271", "///A/273" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -45.822, "beta": 129.727, "gamma": 60.554, "delta": 80.217, "epsilon": -114.414, "zeta": -143.864, "epsilon_zeta": 29.450, "bb_type": "--", "chi": -167.740, "glyco_bond": "anti", "C5prime_xyz": [ -1.753, 8.711, 0.931 ], "P_xyz": [ 0.786, 8.958, 0.382 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -169.323, "theta": -145.066, "eta_prime": -176.492, "theta_prime": -154.200, "eta_base": 173.270, "theta_base": -151.352, "v0": -2.076, "v1": -21.083, "v2": 34.853, "v3": -36.972, "v4": 24.633, "amplitude": 37.501, "phase_angle": 21.659, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "7a", "suiteness": 0.343, "filter_rmsd": 0.037, "frame": { "rmsd": 0.012, "origin": [ 201.314, 305.218, 175.757 ], "x_axis": [ -0.066, 0.057, 0.996 ], "y_axis": [ -0.051, 0.997, -0.060 ], "z_axis": [ -0.997, -0.055, -0.063 ], "quaternion": [ 0.683, -0.002, -0.729, 0.039 ] } }, { "index": 1798, "index_chain": 272, "chain_name": "A", "nt_resnum": 273, "nt_name": "A", "nt_code": "A", "nt_id": "///A/273", "linked_nts": [ "///A/272", "///A/274" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": 100.144, "beta": -101.169, "gamma": -173.959, "delta": 82.425, "epsilon": -109.720, "zeta": -51.871, "epsilon_zeta": -57.849, "bb_type": "--", "chi": -173.851, "glyco_bond": "anti", "C5prime_xyz": [ -1.364, 8.483, 1.390 ], "P_xyz": [ -0.029, 9.446, -0.634 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.594, "theta": -121.023, "eta_prime": 178.623, "theta_prime": -118.778, "eta_base": -164.261, "theta_base": -69.343, "v0": 3.303, "v1": -24.579, "v2": 35.497, "v3": -34.490, "v4": 19.710, "amplitude": 36.512, "phase_angle": 13.544, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.012, "origin": [ 198.281, 303.423, 174.843 ], "x_axis": [ -0.136, 0.290, 0.947 ], "y_axis": [ -0.224, 0.922, -0.315 ], "z_axis": [ -0.965, -0.255, -0.061 ], "quaternion": [ 0.657, -0.023, -0.728, 0.196 ] } }, { "index": 1799, "index_chain": 273, "chain_name": "A", "nt_resnum": 274, "nt_name": "G", "nt_code": "G", "nt_id": "///A/274", "linked_nts": [ "///A/273", "///A/275" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -76.228, "beta": 148.107, "gamma": 82.032, "delta": 77.094, "epsilon": -132.331, "zeta": -76.305, "epsilon_zeta": -56.026, "bb_type": "BI", "chi": -167.701, "glyco_bond": "anti", "C5prime_xyz": [ -1.636, 8.781, 0.958 ], "P_xyz": [ 0.719, 9.479, 0.131 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.007, "theta": -139.807, "eta_prime": -166.792, "theta_prime": -141.076, "eta_base": -86.455, "theta_base": -101.958, "v0": -1.513, "v1": -22.891, "v2": 37.359, "v3": -39.257, "v4": 25.698, "amplitude": 39.953, "phase_angle": 20.757, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.010, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 194.508, 307.079, 178.608 ], "x_axis": [ -0.217, 0.974, 0.063 ], "y_axis": [ -0.161, 0.028, -0.987 ], "z_axis": [ -0.963, -0.224, 0.151 ], "quaternion": [ 0.490, -0.389, -0.523, 0.579 ] } }, { "index": 1800, "index_chain": 274, "chain_name": "A", "nt_resnum": 275, "nt_name": "C", "nt_code": "C", "nt_id": "///A/275", "linked_nts": [ "///A/274", "///A/276" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -56.641, "beta": 158.191, "gamma": 60.392, "delta": 77.967, "epsilon": -160.609, "zeta": -83.160, "epsilon_zeta": -77.450, "bb_type": "BI", "chi": -153.870, "glyco_bond": "anti", "C5prime_xyz": [ -1.627, 8.908, 0.123 ], "P_xyz": [ 0.871, 9.487, -0.359 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.268, "theta": -130.956, "eta_prime": -173.307, "theta_prime": -140.325, "eta_base": -114.535, "theta_base": -119.207, "v0": -2.046, "v1": -21.734, "v2": 35.900, "v3": -38.062, "v4": 25.340, "amplitude": 38.608, "phase_angle": 21.586, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.713, "filter_rmsd": 0.064, "frame": { "rmsd": 0.005, "origin": [ 191.397, 308.690, 179.709 ], "x_axis": [ -0.279, 0.764, -0.582 ], "y_axis": [ -0.192, -0.638, -0.746 ], "z_axis": [ -0.941, -0.097, 0.324 ], "quaternion": [ 0.319, -0.509, -0.281, 0.749 ] } }, { "index": 1801, "index_chain": 275, "chain_name": "A", "nt_resnum": 276, "nt_name": "U", "nt_code": "U", "nt_id": "///A/276", "linked_nts": [ "///A/275", "///A/277" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 158.977, "beta": -150.655, "gamma": 172.385, "delta": 83.616, "epsilon": -113.219, "zeta": -80.695, "epsilon_zeta": -32.524, "bb_type": "--", "chi": -162.968, "glyco_bond": "anti", "C5prime_xyz": [ -1.508, 8.748, 0.684 ], "P_xyz": [ 0.113, 10.001, -0.949 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.818, "theta": -145.948, "eta_prime": -174.592, "theta_prime": -144.256, "eta_base": -138.464, "theta_base": -106.716, "v0": -1.589, "v1": -19.657, "v2": 32.146, "v3": -33.967, "v4": 22.461, "amplitude": 34.478, "phase_angle": 21.193, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.749, "filter_rmsd": 0.101, "frame": { "rmsd": 0.006, "origin": [ 188.396, 310.502, 180.756 ], "x_axis": [ -0.243, 0.378, -0.893 ], "y_axis": [ -0.247, -0.915, -0.320 ], "z_axis": [ -0.938, 0.143, 0.316 ], "quaternion": [ 0.199, -0.582, -0.057, 0.786 ] } }, { "index": 1802, "index_chain": 276, "chain_name": "A", "nt_resnum": 277, "nt_name": "U", "nt_code": "U", "nt_id": "///A/277", "linked_nts": [ "///A/276", "///A/278" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -66.527, "beta": 159.537, "gamma": 49.930, "delta": 78.008, "epsilon": -163.321, "zeta": -106.621, "epsilon_zeta": -56.700, "bb_type": "BI", "chi": -153.567, "glyco_bond": "anti", "C5prime_xyz": [ -1.734, 8.803, 0.114 ], "P_xyz": [ 0.774, 9.443, -0.208 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 144.121, "theta": -147.077, "eta_prime": 168.003, "theta_prime": -153.195, "eta_base": -137.511, "theta_base": -132.800, "v0": -0.939, "v1": -22.647, "v2": 36.260, "v3": -37.827, "v4": 24.424, "amplitude": 38.579, "phase_angle": 19.965, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.358, "filter_rmsd": 0.102, "frame": { "rmsd": 0.007, "origin": [ 184.599, 311.593, 179.537 ], "x_axis": [ 0.095, -0.381, -0.920 ], "y_axis": [ -0.171, -0.916, 0.362 ], "z_axis": [ -0.981, 0.123, -0.152 ], "quaternion": [ 0.081, 0.735, -0.188, -0.646 ] } }, { "index": 1803, "index_chain": 277, "chain_name": "A", "nt_resnum": 278, "nt_name": "C", "nt_code": "C", "nt_id": "///A/278", "linked_nts": [ "///A/277", "///A/279" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 159.335, "beta": -129.142, "gamma": 157.201, "delta": 79.091, "epsilon": -136.207, "zeta": -92.428, "epsilon_zeta": -43.779, "bb_type": "BI", "chi": -167.316, "glyco_bond": "anti", "C5prime_xyz": [ -1.268, 8.732, 0.976 ], "P_xyz": [ 0.760, 9.257, -0.594 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.027, "theta": -153.440, "eta_prime": 171.247, "theta_prime": -158.097, "eta_base": -152.571, "theta_base": -136.542, "v0": 1.558, "v1": -24.404, "v2": 36.891, "v3": -36.920, "v4": 22.283, "amplitude": 38.440, "phase_angle": 16.318, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.026, "filter_rmsd": 0.069, "frame": { "rmsd": 0.009, "origin": [ 182.320, 312.746, 178.093 ], "x_axis": [ 0.152, -0.779, -0.608 ], "y_axis": [ -0.441, -0.604, 0.664 ], "z_axis": [ -0.885, 0.167, -0.435 ], "quaternion": [ 0.168, 0.740, -0.412, -0.504 ] } }, { "index": 1804, "index_chain": 278, "chain_name": "A", "nt_resnum": 279, "nt_name": "A", "nt_code": "A", "nt_id": "///A/279", "linked_nts": [ "///A/278", "///A/280" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -38.174, "beta": 155.513, "gamma": 41.583, "delta": 79.266, "epsilon": -143.796, "zeta": -68.714, "epsilon_zeta": -75.083, "bb_type": "BI", "chi": -175.519, "glyco_bond": "anti", "C5prime_xyz": [ -1.622, 8.542, 1.429 ], "P_xyz": [ 0.876, 8.740, 2.175 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.623, "theta": -104.572, "eta_prime": -177.583, "theta_prime": -115.806, "eta_base": -140.031, "theta_base": -83.936, "v0": 1.015, "v1": -23.969, "v2": 36.624, "v3": -37.015, "v4": 22.672, "amplitude": 38.321, "phase_angle": 17.113, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.268, "filter_rmsd": 0.038, "frame": { "rmsd": 0.010, "origin": [ 179.395, 313.584, 175.126 ], "x_axis": [ 0.190, -0.980, -0.057 ], "y_axis": [ -0.325, -0.117, 0.938 ], "z_axis": [ -0.926, -0.160, -0.341 ], "quaternion": [ 0.428, 0.642, -0.508, -0.383 ] } }, { "index": 1805, "index_chain": 279, "chain_name": "A", "nt_resnum": 280, "nt_name": "U", "nt_code": "U", "nt_id": "///A/280", "linked_nts": [ "///A/279", "///A/281" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical", "alpha": 147.605, "beta": -165.575, "gamma": -175.611, "delta": 78.884, "epsilon": -104.547, "zeta": -127.034, "epsilon_zeta": 22.487, "bb_type": "--", "chi": -163.196, "glyco_bond": "anti", "C5prime_xyz": [ -1.465, 8.725, 0.739 ], "P_xyz": [ -0.350, 10.561, -0.734 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.083, "theta": 163.397, "eta_prime": 178.606, "theta_prime": 173.816, "eta_base": -127.346, "theta_base": 140.928, "v0": 1.087, "v1": -24.237, "v2": 36.975, "v3": -37.349, "v4": 22.837, "amplitude": 38.672, "phase_angle": 17.032, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.720, "filter_rmsd": 0.106, "frame": { "rmsd": 0.007, "origin": [ 178.440, 310.509, 172.653 ], "x_axis": [ -0.090, -0.864, 0.495 ], "y_axis": [ -0.627, 0.435, 0.646 ], "z_axis": [ -0.774, -0.253, -0.581 ], "quaternion": [ -0.437, -0.514, 0.726, 0.135 ] } }, { "index": 1806, "index_chain": 280, "chain_name": "A", "nt_resnum": 281, "nt_name": "U", "nt_code": "U", "nt_id": "///A/281", "linked_nts": [ "///A/280", "///A/282" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -53.247, "beta": 116.614, "gamma": 65.267, "delta": 77.437, "epsilon": -131.234, "zeta": -98.064, "epsilon_zeta": -33.170, "bb_type": "--", "chi": -111.491, "glyco_bond": "anti", "C5prime_xyz": [ -2.484, 8.179, -2.160 ], "P_xyz": [ -0.793, 7.166, -3.876 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.164, "theta": -112.018, "eta_prime": 171.891, "theta_prime": -129.924, "eta_base": 140.157, "theta_base": -124.275, "v0": -3.360, "v1": -20.312, "v2": 34.896, "v3": -37.734, "v4": 25.956, "amplitude": 38.057, "phase_angle": 23.518, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.232, "filter_rmsd": 0.115, "frame": { "rmsd": 0.016, "origin": [ 177.459, 311.701, 171.688 ], "x_axis": [ -0.222, -0.922, 0.315 ], "y_axis": [ -0.973, 0.187, -0.138 ], "z_axis": [ 0.068, -0.338, -0.939 ], "quaternion": [ -0.081, -0.618, 0.766, -0.155 ] } }, { "index": 1807, "index_chain": 281, "chain_name": "A", "nt_resnum": 282, "nt_name": "G", "nt_code": "G", "nt_id": "///A/282", "linked_nts": [ "///A/281", "///A/283" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 170.473, "beta": -155.378, "gamma": 158.582, "delta": 80.623, "epsilon": -156.299, "zeta": -69.253, "epsilon_zeta": -87.046, "bb_type": "BI", "chi": -154.547, "glyco_bond": "anti", "C5prime_xyz": [ -1.458, 8.797, 0.180 ], "P_xyz": [ 0.079, 9.734, -1.739 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 146.950, "theta": -160.799, "eta_prime": 168.991, "theta_prime": -165.341, "eta_base": -167.471, "theta_base": -132.014, "v0": 2.825, "v1": -25.722, "v2": 37.424, "v3": -36.641, "v4": 21.369, "amplitude": 38.629, "phase_angle": 14.348, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.077, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 174.017, 306.377, 168.696 ], "x_axis": [ -0.222, -0.110, 0.969 ], "y_axis": [ -0.703, 0.707, -0.081 ], "z_axis": [ -0.676, -0.699, -0.234 ], "quaternion": [ 0.559, 0.276, -0.735, 0.265 ] } }, { "index": 1808, "index_chain": 282, "chain_name": "A", "nt_resnum": 283, "nt_name": "A", "nt_code": "A", "nt_id": "///A/283", "linked_nts": [ "///A/282", "///A/284" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -72.457, "beta": 165.844, "gamma": 64.598, "delta": 80.164, "epsilon": -140.406, "zeta": -77.224, "epsilon_zeta": -63.182, "bb_type": "BI", "chi": -167.554, "glyco_bond": "anti", "C5prime_xyz": [ -1.267, 8.581, 0.955 ], "P_xyz": [ 1.339, 8.907, 0.719 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.700, "theta": -141.937, "eta_prime": -178.450, "theta_prime": -140.987, "eta_base": -127.919, "theta_base": -114.065, "v0": 5.398, "v1": -27.465, "v2": 37.994, "v3": -35.795, "v4": 19.206, "amplitude": 38.669, "phase_angle": 10.720, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.741, "filter_rmsd": 0.038, "frame": { "rmsd": 0.007, "origin": [ 171.947, 303.473, 169.377 ], "x_axis": [ -0.531, 0.391, 0.751 ], "y_axis": [ -0.473, 0.599, -0.646 ], "z_axis": [ -0.703, -0.698, -0.133 ], "quaternion": [ -0.483, -0.027, 0.752, -0.447 ] } }, { "index": 1809, "index_chain": 283, "chain_name": "A", "nt_resnum": 284, "nt_name": "U", "nt_code": "U", "nt_id": "///A/284", "linked_nts": [ "///A/283", "///A/285" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -57.709, "beta": 164.215, "gamma": 57.047, "delta": 76.668, "epsilon": -110.928, "zeta": -134.959, "epsilon_zeta": 24.031, "bb_type": "--", "chi": -164.990, "glyco_bond": "anti", "C5prime_xyz": [ -1.488, 8.685, 0.834 ], "P_xyz": [ 1.089, 9.106, 0.768 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.767, "theta": -136.238, "eta_prime": -170.929, "theta_prime": -139.318, "eta_base": -130.758, "theta_base": -128.482, "v0": 3.414, "v1": -27.316, "v2": 39.742, "v3": -38.701, "v4": 22.185, "amplitude": 40.932, "phase_angle": 13.850, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.864, "filter_rmsd": 0.107, "frame": { "rmsd": 0.010, "origin": [ 169.358, 300.948, 170.943 ], "x_axis": [ -0.667, 0.700, 0.256 ], "y_axis": [ -0.128, 0.230, -0.965 ], "z_axis": [ -0.734, -0.676, -0.064 ], "quaternion": [ -0.353, 0.204, 0.700, -0.586 ] } }, { "index": 1810, "index_chain": 284, "chain_name": "A", "nt_resnum": 285, "nt_name": "U", "nt_code": "U", "nt_id": "///A/285", "linked_nts": [ "///A/284", "///A/286" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 103.576, "beta": -95.284, "gamma": -169.313, "delta": 80.505, "epsilon": -141.539, "zeta": -61.336, "epsilon_zeta": -80.202, "bb_type": "BI", "chi": -168.088, "glyco_bond": "anti", "C5prime_xyz": [ -1.457, 8.688, 0.987 ], "P_xyz": [ -0.615, 9.571, -1.340 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.958, "theta": -152.127, "eta_prime": -174.584, "theta_prime": -156.502, "eta_base": -148.381, "theta_base": -124.934, "v0": 0.840, "v1": -23.734, "v2": 36.355, "v3": -36.680, "v4": 22.620, "amplitude": 38.066, "phase_angle": 17.242, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.106, "frame": { "rmsd": 0.009, "origin": [ 167.282, 299.393, 172.356 ], "x_axis": [ -0.694, 0.720, 0.009 ], "y_axis": [ -0.200, -0.181, -0.963 ], "z_axis": [ -0.692, -0.670, 0.270 ], "quaternion": [ 0.314, -0.233, -0.557, 0.732 ] } }, { "index": 1811, "index_chain": 285, "chain_name": "A", "nt_resnum": 286, "nt_name": "U", "nt_code": "U", "nt_id": "///A/286", "linked_nts": [ "///A/285", "///A/287" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -72.030, "beta": -178.016, "gamma": 54.814, "delta": 77.375, "epsilon": -171.114, "zeta": -92.285, "epsilon_zeta": -78.829, "bb_type": "BI", "chi": -157.500, "glyco_bond": "anti", "C5prime_xyz": [ -1.708, 8.844, 0.332 ], "P_xyz": [ 0.728, 9.728, 0.656 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.646, "theta": -154.066, "eta_prime": -177.110, "theta_prime": -153.728, "eta_base": -126.327, "theta_base": -138.313, "v0": -2.955, "v1": -21.005, "v2": 35.645, "v3": -38.362, "v4": 26.049, "amplitude": 38.697, "phase_angle": 22.909, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.867, "filter_rmsd": 0.102, "frame": { "rmsd": 0.008, "origin": [ 163.440, 299.108, 174.306 ], "x_axis": [ -0.494, 0.559, -0.667 ], "y_axis": [ 0.241, -0.648, -0.722 ], "z_axis": [ -0.835, -0.517, 0.185 ], "quaternion": [ 0.104, -0.492, -0.406, 0.763 ] } }, { "index": 1812, "index_chain": 286, "chain_name": "A", "nt_resnum": 287, "nt_name": "U", "nt_code": "U", "nt_id": "///A/287", "linked_nts": [ "///A/286", "///A/288" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -166.529, "beta": -139.802, "gamma": 126.267, "delta": 78.076, "epsilon": -101.324, "zeta": -104.349, "epsilon_zeta": 3.025, "bb_type": "--", "chi": -159.322, "glyco_bond": "anti", "C5prime_xyz": [ -1.602, 8.806, 0.472 ], "P_xyz": [ 0.788, 9.144, -0.526 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.434, "theta": -95.694, "eta_prime": 172.522, "theta_prime": -106.183, "eta_base": -167.482, "theta_base": -132.327, "v0": -0.145, "v1": -23.779, "v2": 37.321, "v3": -38.403, "v4": 24.299, "amplitude": 39.421, "phase_angle": 18.785, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.102, "frame": { "rmsd": 0.011, "origin": [ 160.637, 298.463, 175.946 ], "x_axis": [ -0.149, 0.299, -0.942 ], "y_axis": [ 0.237, -0.915, -0.328 ], "z_axis": [ -0.960, -0.272, 0.066 ], "quaternion": [ 0.021, -0.652, -0.206, 0.730 ] } }, { "index": 1813, "index_chain": 287, "chain_name": "A", "nt_resnum": 288, "nt_name": "A", "nt_code": "A", "nt_id": "///A/288", "linked_nts": [ "///A/287", "///A/289" ], "nt_type": "RNA", "dbn": ".", "summary": "BI,non-canonical,multiplet", "alpha": 78.644, "beta": 149.726, "gamma": -78.996, "delta": 149.761, "epsilon": -168.624, "zeta": -115.162, "epsilon_zeta": -53.462, "bb_type": "BI", "chi": -44.310, "glyco_bond": "--", "C5prime_xyz": [ -4.329, 6.084, -2.776 ], "P_xyz": [ -5.317, 7.721, -4.580 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 149.610, "theta": -141.142, "eta_prime": 173.423, "theta_prime": -138.008, "eta_base": 164.144, "theta_base": -104.129, "v0": -27.905, "v1": 44.011, "v2": -42.066, "v3": 26.787, "v4": 0.413, "amplitude": 44.592, "phase_angle": 160.620, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32m", "cluster": "7r", "suiteness": 0.250, "filter_rmsd": 0.040, "frame": { "rmsd": 0.015, "origin": [ 153.799, 298.020, 175.563 ], "x_axis": [ 0.000, 0.564, -0.826 ], "y_axis": [ 0.099, -0.822, -0.561 ], "z_axis": [ -0.995, -0.081, -0.056 ], "quaternion": [ -0.175, 0.685, 0.242, -0.664 ] } }, { "index": 1814, "index_chain": 288, "chain_name": "A", "nt_resnum": 289, "nt_name": "G", "nt_code": "G", "nt_id": "///A/289", "linked_nts": [ "///A/288", "///A/290" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": 131.958, "beta": -136.263, "gamma": -162.152, "delta": 82.258, "epsilon": -135.804, "zeta": -75.586, "epsilon_zeta": -60.218, "bb_type": "BI", "chi": 178.353, "glyco_bond": "anti", "C5prime_xyz": [ -1.217, 8.372, 1.781 ], "P_xyz": [ 0.188, 10.246, 0.583 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -173.555, "theta": -169.111, "eta_prime": -150.108, "theta_prime": -162.690, "eta_base": -102.476, "theta_base": -136.737, "v0": 4.319, "v1": -25.866, "v2": 36.538, "v3": -34.926, "v4": 19.423, "amplitude": 37.372, "phase_angle": 12.127, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 153.802, 293.354, 164.992 ], "x_axis": [ 0.755, -0.604, -0.254 ], "y_axis": [ -0.045, -0.434, 0.900 ], "z_axis": [ -0.654, -0.668, -0.355 ], "quaternion": [ 0.492, 0.797, -0.203, -0.285 ] } }, { "index": 1815, "index_chain": 289, "chain_name": "A", "nt_resnum": 290, "nt_name": "C", "nt_code": "C", "nt_id": "///A/290", "linked_nts": [ "///A/289", "///A/291" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -55.923, "beta": 171.889, "gamma": 48.229, "delta": 76.876, "epsilon": -138.061, "zeta": -85.750, "epsilon_zeta": -52.312, "bb_type": "BI", "chi": -162.575, "glyco_bond": "anti", "C5prime_xyz": [ -1.510, 8.847, 0.643 ], "P_xyz": [ 0.999, 9.450, 1.033 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.332, "theta": -154.288, "eta_prime": -176.521, "theta_prime": -152.147, "eta_base": -140.744, "theta_base": -134.710, "v0": -1.916, "v1": -22.460, "v2": 37.002, "v3": -39.091, "v4": 25.820, "amplitude": 39.711, "phase_angle": 21.285, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.822, "filter_rmsd": 0.066, "frame": { "rmsd": 0.009, "origin": [ 152.388, 291.779, 161.786 ], "x_axis": [ 0.595, -0.763, 0.252 ], "y_axis": [ -0.475, -0.082, 0.876 ], "z_axis": [ -0.648, -0.641, -0.411 ], "quaternion": [ 0.525, 0.722, -0.428, -0.137 ] } }, { "index": 1816, "index_chain": 290, "chain_name": "A", "nt_resnum": 291, "nt_name": "G", "nt_code": "G", "nt_id": "///A/291", "linked_nts": [ "///A/290", "///A/292" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -65.407, "beta": 153.767, "gamma": 67.027, "delta": 77.446, "epsilon": -135.796, "zeta": -55.859, "epsilon_zeta": -79.937, "bb_type": "BI", "chi": -166.891, "glyco_bond": "anti", "C5prime_xyz": [ -1.690, 8.776, 0.869 ], "P_xyz": [ 0.778, 9.450, 0.388 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.368, "theta": -121.233, "eta_prime": 178.056, "theta_prime": -120.430, "eta_base": -154.139, "theta_base": -72.810, "v0": -0.328, "v1": -24.016, "v2": 37.870, "v3": -39.025, "v4": 24.827, "amplitude": 40.056, "phase_angle": 19.014, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.531, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 151.114, 289.679, 159.089 ], "x_axis": [ 0.441, -0.647, 0.622 ], "y_axis": [ -0.723, 0.155, 0.674 ], "z_axis": [ -0.533, -0.746, -0.399 ], "quaternion": [ 0.547, 0.649, -0.528, 0.034 ] } }, { "index": 1817, "index_chain": 291, "chain_name": "A", "nt_resnum": 292, "nt_name": "G", "nt_code": "G", "nt_id": "///A/292", "linked_nts": [ "///A/291", "///A/293" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,helix", "alpha": -71.835, "beta": 170.523, "gamma": 65.612, "delta": 79.331, "epsilon": -110.336, "zeta": 172.078, "epsilon_zeta": 77.587, "bb_type": "BII", "chi": -151.397, "glyco_bond": "anti", "C5prime_xyz": [ -1.598, 8.870, -0.047 ], "P_xyz": [ 0.866, 9.520, -0.650 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.031, "theta": 138.530, "eta_prime": -162.758, "theta_prime": 154.519, "eta_base": -96.314, "theta_base": -164.971, "v0": -2.267, "v1": -21.621, "v2": 35.933, "v3": -38.191, "v4": 25.576, "amplitude": 38.722, "phase_angle": 21.881, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.618, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 150.851, 285.059, 161.532 ], "x_axis": [ -0.361, -0.255, 0.897 ], "y_axis": [ -0.883, 0.402, -0.241 ], "z_axis": [ -0.299, -0.879, -0.371 ], "quaternion": [ -0.409, -0.390, 0.730, -0.384 ] } }, { "index": 1818, "index_chain": 292, "chain_name": "A", "nt_resnum": 293, "nt_name": "A", "nt_code": "A", "nt_id": "///A/293", "linked_nts": [ "///A/292", "///A/294" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BI,non-canonical,helix", "alpha": -19.582, "beta": 147.772, "gamma": 27.762, "delta": 82.417, "epsilon": -160.479, "zeta": -92.350, "epsilon_zeta": -68.129, "bb_type": "BI", "chi": 36.817, "glyco_bond": "syn", "C5prime_xyz": [ -5.732, 4.026, 0.706 ], "P_xyz": [ -6.024, 1.450, 0.454 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -147.507, "theta": -129.931, "eta_prime": -160.968, "theta_prime": -129.293, "eta_base": -172.969, "theta_base": -163.223, "v0": -10.672, "v1": -10.549, "v2": 26.298, "v3": -33.262, "v4": 27.815, "amplitude": 32.969, "phase_angle": 37.095, "puckering": "C4'-exo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.042, "frame": { "rmsd": 0.024, "origin": [ 146.436, 280.806, 155.088 ], "x_axis": [ 0.614, -0.689, -0.385 ], "y_axis": [ -0.153, 0.375, -0.914 ], "z_axis": [ 0.774, 0.620, 0.125 ], "quaternion": [ 0.727, -0.528, 0.399, -0.184 ] } }, { "index": 1819, "index_chain": 293, "chain_name": "A", "nt_resnum": 294, "nt_name": "A", "nt_code": "A", "nt_id": "///A/294", "linked_nts": [ "///A/293", "///A/295" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": 175.671, "beta": -130.202, "gamma": 136.975, "delta": 85.833, "epsilon": -107.129, "zeta": -79.392, "epsilon_zeta": -27.737, "bb_type": "--", "chi": -139.592, "glyco_bond": "anti", "C5prime_xyz": [ -1.577, 8.665, -0.696 ], "P_xyz": [ 0.467, 8.285, -2.292 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.905, "theta": -133.116, "eta_prime": -175.415, "theta_prime": -154.535, "eta_base": 162.871, "theta_base": 162.579, "v0": -0.354, "v1": -20.216, "v2": 31.838, "v3": -32.895, "v4": 21.088, "amplitude": 33.713, "phase_angle": 19.199, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.016, "origin": [ 144.794, 278.148, 152.839 ], "x_axis": [ -0.039, 0.207, 0.977 ], "y_axis": [ -0.816, 0.558, -0.151 ], "z_axis": [ -0.577, -0.803, 0.147 ], "quaternion": [ 0.645, 0.253, -0.602, 0.396 ] } }, { "index": 1820, "index_chain": 294, "chain_name": "A", "nt_resnum": 295, "nt_name": "C", "nt_code": "C", "nt_id": "///A/295", "linked_nts": [ "///A/294", "///A/296" ], "nt_type": "RNA", "dbn": ".", "summary": "canonical,helix,stem-end", "alpha": -47.633, "beta": -111.027, "gamma": -72.360, "delta": 148.292, "epsilon": -149.134, "zeta": -160.494, "epsilon_zeta": 11.360, "bb_type": "--", "chi": -69.155, "glyco_bond": "--", "C5prime_xyz": [ -3.463, 6.961, -2.882 ], "P_xyz": [ -5.333, 7.785, -4.523 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 147.969, "theta": 139.747, "eta_prime": 142.887, "theta_prime": 132.000, "eta_base": 114.288, "theta_base": 159.901, "v0": -26.446, "v1": 40.447, "v2": -38.182, "v3": 23.887, "v4": 1.396, "amplitude": 40.816, "phase_angle": 159.300, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32m", "cluster": "1o", "suiteness": 0.249, "filter_rmsd": 0.066, "frame": { "rmsd": 0.013, "origin": [ 136.706, 270.924, 145.252 ], "x_axis": [ 0.728, -0.615, 0.302 ], "y_axis": [ -0.044, 0.398, 0.916 ], "z_axis": [ -0.684, -0.681, 0.263 ], "quaternion": [ 0.773, 0.517, -0.319, -0.185 ] } }, { "index": 1821, "index_chain": 295, "chain_name": "A", "nt_resnum": 296, "nt_name": "G", "nt_code": "G", "nt_id": "///A/296", "linked_nts": [ "///A/295", "///A/297" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 71.004, "beta": -130.308, "gamma": -150.588, "delta": 80.954, "epsilon": -125.574, "zeta": -83.729, "epsilon_zeta": -41.845, "bb_type": "--", "chi": -163.943, "glyco_bond": "anti", "C5prime_xyz": [ -1.469, 8.790, 0.733 ], "P_xyz": [ -0.840, 10.533, -1.121 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.381, "theta": 176.138, "eta_prime": 146.715, "theta_prime": -178.475, "eta_base": -179.136, "theta_base": -149.018, "v0": -0.768, "v1": -22.009, "v2": 35.107, "v3": -36.478, "v4": 23.497, "amplitude": 37.295, "phase_angle": 19.722, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "4n", "suiteness": 0.533, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 133.266, 268.062, 145.382 ], "x_axis": [ 0.765, -0.372, 0.526 ], "y_axis": [ -0.160, 0.681, 0.714 ], "z_axis": [ -0.624, -0.630, 0.461 ], "quaternion": [ 0.853, 0.394, -0.337, -0.062 ] } }, { "index": 1822, "index_chain": 296, "chain_name": "A", "nt_resnum": 297, "nt_name": "C", "nt_code": "C", "nt_id": "///A/297", "linked_nts": [ "///A/296", "///A/298" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -89.791, "beta": 140.266, "gamma": 88.860, "delta": 80.807, "epsilon": -141.572, "zeta": -61.725, "epsilon_zeta": -79.847, "bb_type": "BI", "chi": -165.030, "glyco_bond": "anti", "C5prime_xyz": [ -1.239, 8.732, 0.816 ], "P_xyz": [ 0.969, 9.189, -0.522 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.006, "theta": -131.192, "eta_prime": 172.268, "theta_prime": -135.831, "eta_base": -147.215, "theta_base": -106.469, "v0": 2.070, "v1": -24.631, "v2": 36.540, "v3": -36.284, "v4": 21.569, "amplitude": 37.916, "phase_angle": 15.483, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.071, "frame": { "rmsd": 0.013, "origin": [ 132.046, 265.473, 146.394 ], "x_axis": [ 0.647, 0.063, 0.760 ], "y_axis": [ -0.628, 0.609, 0.484 ], "z_axis": [ -0.433, -0.790, 0.434 ], "quaternion": [ 0.820, 0.388, -0.364, 0.211 ] } }, { "index": 1823, "index_chain": 297, "chain_name": "A", "nt_resnum": 298, "nt_name": "U", "nt_code": "U", "nt_id": "///A/298", "linked_nts": [ "///A/297", "///A/299" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -72.975, "beta": -179.118, "gamma": 59.675, "delta": 78.509, "epsilon": -158.028, "zeta": -99.587, "epsilon_zeta": -58.441, "bb_type": "BI", "chi": -156.881, "glyco_bond": "anti", "C5prime_xyz": [ -1.576, 8.781, 0.339 ], "P_xyz": [ 0.957, 9.438, 0.433 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.670, "theta": -142.660, "eta_prime": -173.412, "theta_prime": -146.829, "eta_base": -122.278, "theta_base": -126.574, "v0": 0.534, "v1": -23.657, "v2": 36.561, "v3": -37.250, "v4": 23.139, "amplitude": 38.406, "phase_angle": 17.833, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.844, "filter_rmsd": 0.105, "frame": { "rmsd": 0.009, "origin": [ 132.505, 262.308, 149.973 ], "x_axis": [ 0.121, 0.591, 0.798 ], "y_axis": [ -0.918, 0.372, -0.136 ], "z_axis": [ -0.377, -0.716, 0.588 ], "quaternion": [ 0.721, 0.201, -0.407, 0.523 ] } }, { "index": 1824, "index_chain": 298, "chain_name": "A", "nt_resnum": 299, "nt_name": "C", "nt_code": "C", "nt_id": "///A/299", "linked_nts": [ "///A/298", "///A/300" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix", "alpha": 166.210, "beta": -141.015, "gamma": 158.526, "delta": 80.129, "epsilon": -105.259, "zeta": -106.347, "epsilon_zeta": 1.088, "bb_type": "--", "chi": -165.775, "glyco_bond": "anti", "C5prime_xyz": [ -1.231, 8.696, 0.900 ], "P_xyz": [ 0.759, 9.422, -0.619 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.956, "theta": -155.910, "eta_prime": 176.196, "theta_prime": -156.029, "eta_base": -153.225, "theta_base": -141.491, "v0": 2.358, "v1": -24.972, "v2": 36.951, "v3": -36.545, "v4": 21.592, "amplitude": 38.283, "phase_angle": 15.157, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.133, "filter_rmsd": 0.069, "frame": { "rmsd": 0.011, "origin": [ 132.769, 260.099, 152.604 ], "x_axis": [ -0.275, 0.803, 0.529 ], "y_axis": [ -0.934, -0.092, -0.345 ], "z_axis": [ -0.229, -0.589, 0.775 ], "quaternion": [ 0.593, 0.103, -0.319, 0.732 ] } }, { "index": 1825, "index_chain": 299, "chain_name": "A", "nt_resnum": 300, "nt_name": "U", "nt_code": "U", "nt_id": "///A/300", "linked_nts": [ "///A/299", "///A/301" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -54.243, "beta": 134.187, "gamma": 55.675, "delta": 74.094, "epsilon": -131.127, "zeta": -76.617, "epsilon_zeta": -54.511, "bb_type": "BI", "chi": -153.620, "glyco_bond": "anti", "C5prime_xyz": [ -1.828, 8.827, 0.108 ], "P_xyz": [ 0.587, 9.080, -0.823 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.899, "theta": -131.243, "eta_prime": 168.246, "theta_prime": -130.972, "eta_base": -163.835, "theta_base": -86.137, "v0": -0.113, "v1": -25.145, "v2": 39.606, "v3": -40.666, "v4": 25.643, "amplitude": 41.815, "phase_angle": 18.707, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.724, "filter_rmsd": 0.104, "frame": { "rmsd": 0.012, "origin": [ 132.699, 258.710, 155.101 ], "x_axis": [ -0.568, 0.803, 0.178 ], "y_axis": [ -0.812, -0.512, -0.282 ], "z_axis": [ -0.135, -0.305, 0.943 ], "quaternion": [ 0.464, 0.012, -0.169, 0.869 ] } }, { "index": 1826, "index_chain": 300, "chain_name": "A", "nt_resnum": 301, "nt_name": "G", "nt_code": "G", "nt_id": "///A/301", "linked_nts": [ "///A/300", "///A/302" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -56.182, "beta": 164.117, "gamma": 57.005, "delta": 82.387, "epsilon": -138.194, "zeta": -71.938, "epsilon_zeta": -66.256, "bb_type": "BI", "chi": -151.853, "glyco_bond": "anti", "C5prime_xyz": [ -1.185, 8.715, 0.025 ], "P_xyz": [ 1.400, 8.811, -0.430 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.512, "theta": -109.981, "eta_prime": -171.586, "theta_prime": -156.244, "eta_base": -109.385, "theta_base": 140.750, "v0": 3.926, "v1": -25.526, "v2": 36.239, "v3": -34.939, "v4": 19.568, "amplitude": 37.142, "phase_angle": 12.661, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.700, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 128.961, 260.282, 157.967 ], "x_axis": [ -0.919, 0.117, -0.376 ], "y_axis": [ -0.095, -0.993, -0.075 ], "z_axis": [ -0.382, -0.033, 0.923 ], "quaternion": [ 0.054, -0.194, -0.028, 0.979 ] } }, { "index": 1827, "index_chain": 301, "chain_name": "A", "nt_resnum": 302, "nt_name": "G", "nt_code": "G", "nt_id": "///A/302", "linked_nts": [ "///A/301", "///A/303" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix", "alpha": 159.556, "beta": 163.423, "gamma": 60.006, "delta": 86.965, "epsilon": -127.888, "zeta": -82.012, "epsilon_zeta": -45.875, "bb_type": "--", "chi": -165.344, "glyco_bond": "anti", "C5prime_xyz": [ -1.098, 8.629, 0.952 ], "P_xyz": [ 1.506, 8.593, 1.275 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 26.748, "theta": -131.535, "eta_prime": 51.094, "theta_prime": -129.953, "eta_base": 28.026, "theta_base": -91.392, "v0": 2.089, "v1": -21.585, "v2": 31.782, "v3": -31.400, "v4": 18.638, "amplitude": 32.916, "phase_angle": 15.085, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.829, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 135.844, 255.065, 165.814 ], "x_axis": [ 0.373, -0.798, -0.474 ], "y_axis": [ -0.926, -0.291, -0.239 ], "z_axis": [ 0.053, 0.529, -0.847 ], "quaternion": [ -0.242, 0.792, -0.544, -0.133 ] } }, { "index": 1828, "index_chain": 302, "chain_name": "A", "nt_resnum": 303, "nt_name": "A", "nt_code": "A", "nt_id": "///A/303", "linked_nts": [ "///A/302", "///A/304" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -61.329, "beta": 152.227, "gamma": 60.484, "delta": 86.497, "epsilon": -129.334, "zeta": -81.754, "epsilon_zeta": -47.579, "bb_type": "--", "chi": -148.383, "glyco_bond": "anti", "C5prime_xyz": [ -1.516, 8.693, -0.132 ], "P_xyz": [ 1.026, 8.841, -0.741 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.923, "theta": -113.626, "eta_prime": -172.824, "theta_prime": -114.720, "eta_base": -118.177, "theta_base": -104.435, "v0": 2.434, "v1": -22.872, "v2": 33.444, "v3": -32.899, "v4": 19.249, "amplitude": 34.562, "phase_angle": 14.616, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.563, "filter_rmsd": 0.041, "frame": { "rmsd": 0.015, "origin": [ 136.388, 255.624, 162.573 ], "x_axis": [ -0.273, -0.774, -0.571 ], "y_axis": [ -0.923, 0.378, -0.072 ], "z_axis": [ 0.271, 0.507, -0.818 ], "quaternion": [ 0.268, -0.540, 0.786, 0.139 ] } }, { "index": 1829, "index_chain": 303, "chain_name": "A", "nt_resnum": 304, "nt_name": "A", "nt_code": "A", "nt_id": "///A/304", "linked_nts": [ "///A/303", "///A/305" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,helix", "alpha": -157.564, "beta": -177.384, "gamma": 167.750, "delta": 147.974, "epsilon": -133.420, "zeta": -177.457, "epsilon_zeta": 44.037, "bb_type": "BII", "chi": -108.066, "glyco_bond": "anti", "C5prime_xyz": [ -2.150, 8.313, -1.722 ], "P_xyz": [ -0.672, 8.889, -3.773 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -148.522, "theta": 166.384, "eta_prime": -133.093, "theta_prime": 136.837, "eta_base": -124.795, "theta_base": 75.841, "v0": -23.534, "v1": 37.926, "v2": -37.179, "v3": 24.462, "v4": -0.732, "amplitude": 39.002, "phase_angle": 162.414, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "1t", "suiteness": 0.271, "filter_rmsd": 0.041, "frame": { "rmsd": 0.012, "origin": [ 136.142, 256.582, 155.594 ], "x_axis": [ -0.752, -0.626, -0.207 ], "y_axis": [ -0.654, 0.748, 0.114 ], "z_axis": [ 0.083, 0.221, -0.972 ], "quaternion": [ 0.078, -0.343, 0.932, 0.090 ] } }, { "index": 1830, "index_chain": 304, "chain_name": "A", "nt_resnum": 305, "nt_name": "A", "nt_code": "A", "nt_id": "///A/305", "linked_nts": [ "///A/304", "///A/306" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn", "alpha": 129.790, "beta": -139.003, "gamma": 77.160, "delta": 145.316, "epsilon": -121.345, "zeta": -85.319, "epsilon_zeta": -36.026, "bb_type": "--", "chi": 36.512, "glyco_bond": "syn", "C5prime_xyz": [ -5.773, 4.540, 0.089 ], "P_xyz": [ -6.064, 2.672, -1.709 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 77.647, "theta": -76.962, "eta_prime": 89.780, "theta_prime": -92.599, "eta_base": 63.242, "theta_base": -55.451, "v0": -29.316, "v1": 41.638, "v2": -37.168, "v3": 21.350, "v4": 4.743, "amplitude": 41.150, "phase_angle": 154.588, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.017, "origin": [ 138.444, 265.295, 162.034 ], "x_axis": [ 0.599, -0.538, 0.593 ], "y_axis": [ 0.529, -0.291, -0.798 ], "z_axis": [ 0.602, 0.791, 0.110 ], "quaternion": [ 0.595, -0.667, 0.004, -0.448 ] } }, { "index": 1831, "index_chain": 305, "chain_name": "A", "nt_resnum": 306, "nt_name": "G", "nt_code": "G", "nt_id": "///A/306", "linked_nts": [ "///A/305", "///A/307" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix", "alpha": -91.159, "beta": 174.106, "gamma": 70.003, "delta": 80.806, "epsilon": -129.468, "zeta": -75.264, "epsilon_zeta": -54.204, "bb_type": "BI", "chi": 173.312, "glyco_bond": "anti", "C5prime_xyz": [ -1.165, 8.164, 2.042 ], "P_xyz": [ 1.422, 8.132, 2.449 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.282, "theta": -132.378, "eta_prime": -163.962, "theta_prime": -130.148, "eta_base": -142.164, "theta_base": -116.388, "v0": 6.640, "v1": -28.615, "v2": 38.678, "v3": -35.775, "v4": 18.380, "amplitude": 39.163, "phase_angle": 9.022, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.293, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 132.447, 259.766, 152.006 ], "x_axis": [ -0.383, 0.903, 0.197 ], "y_axis": [ 0.912, 0.336, 0.235 ], "z_axis": [ 0.146, 0.270, -0.952 ], "quaternion": [ -0.015, 0.555, 0.817, 0.154 ] } }, { "index": 1832, "index_chain": 306, "chain_name": "A", "nt_resnum": 307, "nt_name": "U", "nt_code": "U", "nt_id": "///A/307", "linked_nts": [ "///A/306", "///A/308" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -59.390, "beta": -173.048, "gamma": 50.187, "delta": 81.172, "epsilon": -147.670, "zeta": -65.474, "epsilon_zeta": -82.195, "bb_type": "BI", "chi": -159.682, "glyco_bond": "anti", "C5prime_xyz": [ -1.579, 8.810, 0.449 ], "P_xyz": [ 0.824, 9.567, 1.162 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.711, "theta": -107.439, "eta_prime": -172.307, "theta_prime": -114.588, "eta_base": -145.806, "theta_base": -74.976, "v0": -2.845, "v1": -19.719, "v2": 33.423, "v3": -35.962, "v4": 24.497, "amplitude": 36.299, "phase_angle": 22.963, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.749, "filter_rmsd": 0.101, "frame": { "rmsd": 0.011, "origin": [ 130.137, 260.510, 147.967 ], "x_axis": [ 0.120, 0.910, 0.397 ], "y_axis": [ 0.979, -0.174, 0.103 ], "z_axis": [ 0.163, 0.377, -0.912 ], "quaternion": [ -0.092, 0.743, 0.636, 0.189 ] } }, { "index": 1833, "index_chain": 307, "chain_name": "A", "nt_resnum": 308, "nt_name": "G", "nt_code": "G", "nt_id": "///A/308", "linked_nts": [ "///A/307", "///A/309" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 133.996, "beta": -162.595, "gamma": -169.066, "delta": 81.045, "epsilon": -105.651, "zeta": -98.956, "epsilon_zeta": -6.695, "bb_type": "--", "chi": -176.879, "glyco_bond": "anti", "C5prime_xyz": [ -1.104, 8.391, 1.532 ], "P_xyz": [ 0.310, 10.395, 0.638 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.593, "theta": -164.383, "eta_prime": -179.784, "theta_prime": -153.737, "eta_base": -117.479, "theta_base": -109.486, "v0": 6.156, "v1": -27.994, "v2": 38.105, "v3": -35.546, "v4": 18.557, "amplitude": 38.653, "phase_angle": 9.656, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.525, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 131.445, 265.675, 146.671 ], "x_axis": [ 0.764, 0.367, 0.531 ], "y_axis": [ 0.561, -0.784, -0.266 ], "z_axis": [ 0.319, 0.501, -0.805 ], "quaternion": [ -0.209, 0.915, 0.253, 0.232 ] } }, { "index": 1834, "index_chain": 308, "chain_name": "A", "nt_resnum": 309, "nt_name": "C", "nt_code": "C", "nt_id": "///A/309", "linked_nts": [ "///A/308", "///A/310" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -43.039, "beta": 138.974, "gamma": 55.406, "delta": 77.853, "epsilon": -139.671, "zeta": -27.564, "epsilon_zeta": -112.106, "bb_type": "--", "chi": -156.996, "glyco_bond": "anti", "C5prime_xyz": [ -1.626, 8.910, 0.287 ], "P_xyz": [ 0.898, 9.187, -0.313 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.620, "theta": -110.543, "eta_prime": -176.873, "theta_prime": -132.815, "eta_base": -123.921, "theta_base": -128.140, "v0": -3.667, "v1": -20.261, "v2": 35.111, "v3": -38.197, "v4": 26.423, "amplitude": 38.423, "phase_angle": 23.962, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.758, "filter_rmsd": 0.060, "frame": { "rmsd": 0.008, "origin": [ 133.431, 268.219, 145.811 ], "x_axis": [ 0.919, -0.232, 0.319 ], "y_axis": [ 0.080, -0.683, -0.726 ], "z_axis": [ 0.386, 0.693, -0.609 ], "quaternion": [ -0.396, 0.896, -0.043, 0.197 ] } }, { "index": 1835, "index_chain": 309, "chain_name": "A", "nt_resnum": 310, "nt_name": "G", "nt_code": "G", "nt_id": "///A/310", "linked_nts": [ "///A/309", "///A/311" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -142.839, "beta": 101.662, "gamma": 155.750, "delta": 83.801, "epsilon": -137.062, "zeta": -72.567, "epsilon_zeta": -64.495, "bb_type": "BI", "chi": -170.043, "glyco_bond": "anti", "C5prime_xyz": [ -1.265, 8.512, 1.134 ], "P_xyz": [ -1.239, 10.443, -0.639 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.389, "theta": 171.785, "eta_prime": 171.886, "theta_prime": -174.351, "eta_base": -162.634, "theta_base": -136.100, "v0": 6.284, "v1": -27.067, "v2": 36.350, "v3": -33.755, "v4": 17.358, "amplitude": 36.806, "phase_angle": 9.021, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 135.558, 271.223, 145.841 ], "x_axis": [ 0.770, -0.588, 0.248 ], "y_axis": [ -0.090, -0.484, -0.870 ], "z_axis": [ 0.632, 0.648, -0.426 ], "quaternion": [ -0.464, 0.818, -0.207, 0.269 ] } }, { "index": 1836, "index_chain": 310, "chain_name": "A", "nt_resnum": 311, "nt_name": "G", "nt_code": "G", "nt_id": "///A/311", "linked_nts": [ "///A/310", "///A/312" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -86.638, "beta": 168.167, "gamma": 75.582, "delta": 81.715, "epsilon": -152.434, "zeta": -78.710, "epsilon_zeta": -73.723, "bb_type": "BI", "chi": -168.912, "glyco_bond": "anti", "C5prime_xyz": [ -1.367, 8.608, 1.036 ], "P_xyz": [ 1.180, 9.077, 0.649 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.749, "theta": -151.651, "eta_prime": 179.912, "theta_prime": -152.420, "eta_base": -130.183, "theta_base": -131.275, "v0": 3.546, "v1": -25.708, "v2": 36.855, "v3": -35.761, "v4": 20.366, "amplitude": 37.875, "phase_angle": 13.329, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.211, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 139.180, 273.007, 145.702 ], "x_axis": [ 0.465, -0.830, -0.308 ], "y_axis": [ -0.507, 0.036, -0.861 ], "z_axis": [ 0.726, 0.556, -0.404 ], "quaternion": [ 0.524, -0.677, 0.494, -0.154 ] } }, { "index": 1837, "index_chain": 311, "chain_name": "A", "nt_resnum": 312, "nt_name": "C", "nt_code": "C", "nt_id": "///A/312", "linked_nts": [ "///A/311", "///A/313" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": -61.205, "beta": 165.375, "gamma": 64.859, "delta": 80.421, "epsilon": -147.445, "zeta": -81.159, "epsilon_zeta": -66.287, "bb_type": "BI", "chi": -162.219, "glyco_bond": "anti", "C5prime_xyz": [ -1.268, 8.725, 0.669 ], "P_xyz": [ 1.327, 8.961, 0.359 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.215, "theta": -149.598, "eta_prime": -169.718, "theta_prime": -151.869, "eta_base": -133.746, "theta_base": -146.474, "v0": 3.981, "v1": -26.613, "v2": 37.974, "v3": -36.543, "v4": 20.525, "amplitude": 38.936, "phase_angle": 12.763, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.742, "filter_rmsd": 0.071, "frame": { "rmsd": 0.014, "origin": [ 142.931, 274.623, 145.602 ], "x_axis": [ 0.268, -0.592, -0.760 ], "y_axis": [ -0.643, 0.478, -0.599 ], "z_axis": [ 0.718, 0.649, -0.252 ], "quaternion": [ 0.611, -0.510, 0.605, 0.021 ] } }, { "index": 1838, "index_chain": 312, "chain_name": "A", "nt_resnum": 313, "nt_name": "C", "nt_code": "C", "nt_id": "///A/313", "linked_nts": [ "///A/312", "///A/314" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end", "alpha": -54.872, "beta": 170.504, "gamma": 55.054, "delta": 77.752, "epsilon": -139.863, "zeta": -70.720, "epsilon_zeta": -69.143, "bb_type": "BI", "chi": -160.549, "glyco_bond": "anti", "C5prime_xyz": [ -1.620, 8.907, 0.495 ], "P_xyz": [ 0.873, 9.631, 0.706 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.256, "theta": -139.098, "eta_prime": -174.802, "theta_prime": -137.241, "eta_base": -159.197, "theta_base": -97.633, "v0": -3.500, "v1": -21.222, "v2": 36.480, "v3": -39.443, "v4": 27.095, "amplitude": 39.779, "phase_angle": 23.499, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.850, "filter_rmsd": 0.065, "frame": { "rmsd": 0.013, "origin": [ 146.937, 276.148, 146.381 ], "x_axis": [ -0.072, -0.494, -0.866 ], "y_axis": [ -0.675, 0.663, -0.322 ], "z_axis": [ 0.734, 0.562, -0.381 ], "quaternion": [ 0.550, -0.402, 0.727, 0.082 ] } }, { "index": 1839, "index_chain": 313, "chain_name": "A", "nt_resnum": 314, "nt_name": "A", "nt_code": "A", "nt_id": "///A/314", "linked_nts": [ "///A/313", "///A/315" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -62.624, "beta": 174.309, "gamma": 38.484, "delta": 65.166, "epsilon": 72.128, "zeta": 77.523, "epsilon_zeta": -5.394, "bb_type": "--", "chi": -154.582, "glyco_bond": "anti", "C5prime_xyz": [ -1.547, 8.724, 0.187 ], "P_xyz": [ 0.965, 9.373, 0.285 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 178.242, "theta": -164.873, "eta_prime": -164.485, "theta_prime": 160.496, "eta_base": -114.059, "theta_base": 176.930, "v0": 5.325, "v1": -30.705, "v2": 43.609, "v3": -41.577, "v4": 22.746, "amplitude": 44.567, "phase_angle": 11.904, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.282, "filter_rmsd": 0.042, "frame": { "rmsd": 0.014, "origin": [ 149.219, 276.652, 143.390 ], "x_axis": [ -0.670, -0.082, -0.738 ], "y_axis": [ -0.382, 0.891, 0.247 ], "z_axis": [ 0.637, 0.447, -0.628 ], "quaternion": [ 0.385, -0.130, 0.893, 0.194 ] } }, { "index": 1840, "index_chain": 314, "chain_name": "A", "nt_resnum": 315, "nt_name": "U", "nt_code": "U", "nt_id": "///A/315", "linked_nts": [ "///A/314", "///A/316" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": 142.766, "beta": 114.383, "gamma": -25.980, "delta": 147.582, "epsilon": -101.873, "zeta": -121.980, "epsilon_zeta": 20.107, "bb_type": "--", "chi": -104.674, "glyco_bond": "anti", "C5prime_xyz": [ -1.963, 8.092, -1.935 ], "P_xyz": [ -0.409, 9.708, -0.590 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -6.091, "theta": -60.057, "eta_prime": 10.797, "theta_prime": -78.938, "eta_base": -28.689, "theta_base": -62.004, "v0": -18.354, "v1": 33.089, "v2": -34.374, "v3": 24.661, "v4": -4.110, "amplitude": 35.154, "phase_angle": 167.904, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.105, "frame": { "rmsd": 0.004, "origin": [ 157.911, 291.867, 148.937 ], "x_axis": [ -0.569, 0.795, -0.209 ], "y_axis": [ -0.751, -0.606, -0.260 ], "z_axis": [ -0.334, 0.009, 0.943 ], "quaternion": [ 0.438, -0.154, -0.071, 0.883 ] } }, { "index": 1841, "index_chain": 315, "chain_name": "A", "nt_resnum": 316, "nt_name": "A", "nt_code": "A", "nt_id": "///A/316", "linked_nts": [ "///A/315", "///A/317" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": 178.522, "beta": -150.647, "gamma": 149.936, "delta": 145.562, "epsilon": -135.654, "zeta": 11.740, "epsilon_zeta": 212.606, "bb_type": "--", "chi": -113.035, "glyco_bond": "anti", "C5prime_xyz": [ -2.342, 8.408, -1.531 ], "P_xyz": [ -0.161, 8.665, -2.934 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 151.310, "theta": -3.177, "eta_prime": -152.841, "theta_prime": -58.829, "eta_base": -142.410, "theta_base": -77.506, "v0": -25.951, "v1": 39.062, "v2": -36.506, "v3": 22.442, "v4": 1.956, "amplitude": 39.268, "phase_angle": 158.381, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.012, "origin": [ 147.432, 286.155, 153.090 ], "x_axis": [ -0.317, 0.450, -0.835 ], "y_axis": [ 0.520, -0.653, -0.550 ], "z_axis": [ -0.793, -0.609, -0.027 ], "quaternion": [ -0.025, -0.584, -0.416, 0.697 ] } }, { "index": 1842, "index_chain": 316, "chain_name": "A", "nt_resnum": 317, "nt_name": "G", "nt_code": "G", "nt_id": "///A/317", "linked_nts": [ "///A/316", "///A/318" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BII,canonical,helix-end", "alpha": -116.526, "beta": -131.803, "gamma": -54.168, "delta": 142.737, "epsilon": -95.801, "zeta": 131.929, "epsilon_zeta": 132.271, "bb_type": "BII", "chi": 48.924, "glyco_bond": "syn", "C5prime_xyz": [ -5.420, 3.784, 0.642 ], "P_xyz": [ -7.982, 3.269, 0.868 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 84.794, "theta": 121.963, "eta_prime": 125.082, "theta_prime": 129.453, "eta_base": 153.657, "theta_base": 154.558, "v0": -21.512, "v1": 33.470, "v2": -32.045, "v3": 20.400, "v4": 0.493, "amplitude": 34.011, "phase_angle": 160.422, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 146.803, 276.376, 146.682 ], "x_axis": [ -0.449, -0.494, -0.744 ], "y_axis": [ 0.622, -0.771, 0.136 ], "z_axis": [ -0.641, -0.402, 0.654 ], "quaternion": [ -0.329, -0.409, -0.078, 0.848 ] } }, { "index": 1843, "index_chain": 317, "chain_name": "A", "nt_resnum": 318, "nt_name": "U", "nt_code": "U", "nt_id": "///A/318", "linked_nts": [ "///A/317", "///A/319" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": 61.524, "beta": -133.960, "gamma": -88.502, "delta": 158.164, "epsilon": -96.628, "zeta": -100.723, "epsilon_zeta": 4.095, "bb_type": "--", "chi": -100.290, "glyco_bond": "anti", "C5prime_xyz": [ -1.351, 7.705, -1.962 ], "P_xyz": [ -0.751, 9.175, -4.009 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -72.192, "theta": -75.682, "eta_prime": -93.868, "theta_prime": -73.850, "eta_base": -97.863, "theta_base": 60.322, "v0": -6.590, "v1": 26.290, "v2": -34.728, "v3": 31.911, "v4": -16.102, "amplitude": 35.074, "phase_angle": 188.059, "puckering": "C3'-exo", "sugar_class": "--", "bin": "22m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.108, "frame": { "rmsd": 0.011, "origin": [ 156.183, 264.647, 147.974 ], "x_axis": [ 0.907, 0.181, -0.381 ], "y_axis": [ 0.130, 0.740, 0.660 ], "z_axis": [ 0.401, -0.648, 0.647 ], "quaternion": [ 0.907, 0.360, 0.215, 0.014 ] } }, { "index": 1844, "index_chain": 318, "chain_name": "A", "nt_resnum": 319, "nt_name": "G", "nt_code": "G", "nt_id": "///A/319", "linked_nts": [ "///A/318", "///A/320" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 67.989, "beta": 114.020, "gamma": 51.886, "delta": 77.984, "epsilon": -124.245, "zeta": -74.344, "epsilon_zeta": -49.901, "bb_type": "--", "chi": -179.225, "glyco_bond": "anti", "C5prime_xyz": [ -1.594, 8.590, 1.603 ], "P_xyz": [ 1.016, 8.286, 1.437 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -137.278, "theta": -123.752, "eta_prime": -94.207, "theta_prime": -131.344, "eta_base": 157.401, "theta_base": -106.142, "v0": -0.497, "v1": -23.195, "v2": 36.763, "v3": -38.050, "v4": 24.302, "amplitude": 38.955, "phase_angle": 19.315, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "8d", "suiteness": 0.011, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 148.709, 275.522, 161.318 ], "x_axis": [ -0.654, 0.085, -0.752 ], "y_axis": [ 0.626, -0.499, -0.600 ], "z_axis": [ -0.426, -0.863, 0.273 ], "quaternion": [ -0.174, -0.378, -0.470, 0.779 ] } }, { "index": 1845, "index_chain": 319, "chain_name": "A", "nt_resnum": 320, "nt_name": "G", "nt_code": "G", "nt_id": "///A/320", "linked_nts": [ "///A/319", "///A/321" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -92.204, "beta": 142.039, "gamma": 97.398, "delta": 79.351, "epsilon": -129.711, "zeta": -109.305, "epsilon_zeta": -20.406, "bb_type": "--", "chi": 173.619, "glyco_bond": "anti", "C5prime_xyz": [ -1.449, 8.283, 1.979 ], "P_xyz": [ 0.851, 9.221, 1.157 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.708, "theta": -128.073, "eta_prime": -179.189, "theta_prime": -123.979, "eta_base": -123.580, "theta_base": -116.856, "v0": 4.820, "v1": -28.210, "v2": 39.703, "v3": -37.733, "v4": 20.749, "amplitude": 40.555, "phase_angle": 11.766, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 145.361, 272.952, 161.931 ], "x_axis": [ -0.160, -0.275, -0.948 ], "y_axis": [ 0.909, -0.415, -0.033 ], "z_axis": [ -0.384, -0.867, 0.317 ], "quaternion": [ -0.431, -0.484, -0.327, 0.688 ] } }, { "index": 1846, "index_chain": 320, "chain_name": "A", "nt_resnum": 321, "nt_name": "G", "nt_code": "G", "nt_id": "///A/321", "linked_nts": [ "///A/320", "///A/322" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 47.059, "beta": 121.913, "gamma": -2.264, "delta": 149.174, "epsilon": -167.633, "zeta": -121.329, "epsilon_zeta": -46.304, "bb_type": "BI", "chi": -103.492, "glyco_bond": "anti", "C5prime_xyz": [ -3.236, 8.151, -1.706 ], "P_xyz": [ -1.376, 9.862, -0.871 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.482, "theta": -144.028, "eta_prime": -163.967, "theta_prime": -161.011, "eta_base": -139.194, "theta_base": -95.010, "v0": -29.132, "v1": 44.558, "v2": -41.373, "v3": 25.551, "v4": 1.925, "amplitude": 44.456, "phase_angle": 158.536, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 142.096, 271.539, 161.050 ], "x_axis": [ 0.401, -0.142, -0.905 ], "y_axis": [ 0.749, -0.518, 0.413 ], "z_axis": [ -0.528, -0.843, -0.101 ], "quaternion": [ 0.442, 0.711, 0.213, -0.504 ] } }, { "index": 1847, "index_chain": 321, "chain_name": "A", "nt_resnum": 322, "nt_name": "U", "nt_code": "U", "nt_id": "///A/322", "linked_nts": [ "///A/321", "///A/323" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -84.228, "beta": 149.510, "gamma": 84.114, "delta": 80.515, "epsilon": -154.934, "zeta": 54.378, "epsilon_zeta": 150.687, "bb_type": "--", "chi": -148.784, "glyco_bond": "anti", "C5prime_xyz": [ -1.860, 8.856, -0.215 ], "P_xyz": [ 0.328, 9.424, -1.531 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.097, "theta": -31.580, "eta_prime": -178.895, "theta_prime": -86.144, "eta_base": -99.453, "theta_base": -142.027, "v0": -6.051, "v1": -16.962, "v2": 32.125, "v3": -36.515, "v4": 26.843, "amplitude": 36.365, "phase_angle": 27.944, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.105, "frame": { "rmsd": 0.015, "origin": [ 141.505, 267.766, 159.099 ], "x_axis": [ 0.620, -0.759, -0.197 ], "y_axis": [ 0.064, -0.201, 0.978 ], "z_axis": [ -0.782, -0.619, -0.076 ], "quaternion": [ 0.580, 0.689, -0.252, -0.355 ] } }, { "index": 1848, "index_chain": 322, "chain_name": "A", "nt_resnum": 323, "nt_name": "G", "nt_code": "G", "nt_id": "///A/323", "linked_nts": [ "///A/322", "///A/324" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix", "alpha": -109.846, "beta": -128.546, "gamma": 162.293, "delta": 150.495, "epsilon": -101.323, "zeta": -69.457, "epsilon_zeta": -31.866, "bb_type": "--", "chi": -141.333, "glyco_bond": "anti", "C5prime_xyz": [ -2.075, 8.718, 0.001 ], "P_xyz": [ 0.448, 8.956, -0.640 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -33.691, "theta": -37.547, "eta_prime": 32.376, "theta_prime": -108.226, "eta_base": 64.035, "theta_base": -113.774, "v0": -23.833, "v1": 38.911, "v2": -38.262, "v3": 25.592, "v4": -1.364, "amplitude": 39.990, "phase_angle": 163.095, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 129.869, 260.617, 167.661 ], "x_axis": [ -0.565, 0.818, 0.106 ], "y_axis": [ 0.808, 0.575, -0.129 ], "z_axis": [ -0.166, 0.013, -0.986 ], "quaternion": [ -0.077, 0.460, 0.884, -0.033 ] } }, { "index": 1849, "index_chain": 323, "chain_name": "A", "nt_resnum": 324, "nt_name": "A", "nt_code": "A", "nt_id": "///A/324", "linked_nts": [ "///A/323", "///A/325" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,non-canonical,helix", "alpha": 122.297, "beta": 127.010, "gamma": 156.553, "delta": 146.602, "epsilon": -108.137, "zeta": -104.055, "epsilon_zeta": -4.082, "bb_type": "--", "chi": 67.432, "glyco_bond": "syn", "C5prime_xyz": [ -5.408, 4.901, 1.503 ], "P_xyz": [ -5.840, 4.291, 4.001 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 90.829, "theta": -127.539, "eta_prime": 138.367, "theta_prime": -154.210, "eta_base": 168.339, "theta_base": 163.249, "v0": -28.161, "v1": 41.255, "v2": -37.723, "v3": 22.497, "v4": 3.242, "amplitude": 41.094, "phase_angle": 156.633, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.047, "frame": { "rmsd": 0.019, "origin": [ 133.883, 258.345, 159.479 ], "x_axis": [ -0.383, -0.813, -0.439 ], "y_axis": [ 0.911, -0.412, -0.032 ], "z_axis": [ -0.155, -0.412, 0.898 ], "quaternion": [ 0.525, 0.181, 0.135, -0.821 ] } }, { "index": 1850, "index_chain": 324, "chain_name": "A", "nt_resnum": 325, "nt_name": "U", "nt_code": "U", "nt_id": "///A/325", "linked_nts": [ "///A/324", "///A/326" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-stack", "alpha": 97.862, "beta": 169.748, "gamma": 150.080, "delta": 144.003, "epsilon": -106.371, "zeta": -70.113, "epsilon_zeta": -36.258, "bb_type": "--", "chi": -123.337, "glyco_bond": "anti", "C5prime_xyz": [ -1.821, 8.535, -1.061 ], "P_xyz": [ 0.049, 9.147, -2.784 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 84.321, "theta": -102.180, "eta_prime": 128.206, "theta_prime": -103.122, "eta_base": 109.011, "theta_base": -85.961, "v0": -20.122, "v1": 33.067, "v2": -32.650, "v3": 21.885, "v4": -1.320, "amplitude": 34.072, "phase_angle": 163.386, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.105, "frame": { "rmsd": 0.007, "origin": [ 142.523, 255.766, 151.871 ], "x_axis": [ -0.716, -0.583, 0.384 ], "y_axis": [ -0.051, 0.593, 0.804 ], "z_axis": [ -0.697, 0.556, -0.454 ], "quaternion": [ -0.325, -0.191, 0.831, 0.409 ] } }, { "index": 1851, "index_chain": 325, "chain_name": "A", "nt_resnum": 326, "nt_name": "A", "nt_code": "A", "nt_id": "///A/326", "linked_nts": [ "///A/325", "///A/327" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -74.824, "beta": -137.734, "gamma": 58.299, "delta": 142.285, "epsilon": -88.410, "zeta": -143.479, "epsilon_zeta": 55.069, "bb_type": "--", "chi": -104.148, "glyco_bond": "anti", "C5prime_xyz": [ -2.873, 8.168, -1.972 ], "P_xyz": [ -1.046, 9.983, -1.456 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -156.184, "theta": -96.641, "eta_prime": -116.058, "theta_prime": -149.301, "eta_base": -110.510, "theta_base": 164.433, "v0": -28.933, "v1": 40.664, "v2": -36.132, "v3": 20.357, "v4": 5.130, "amplitude": 40.219, "phase_angle": 153.944, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "2[", "suiteness": 0.839, "filter_rmsd": 0.043, "frame": { "rmsd": 0.013, "origin": [ 137.295, 270.436, 158.141 ], "x_axis": [ -0.105, -0.344, 0.933 ], "y_axis": [ 0.869, -0.488, -0.082 ], "z_axis": [ 0.483, 0.802, 0.350 ], "quaternion": [ -0.435, 0.508, 0.259, 0.697 ] } }, { "index": 1852, "index_chain": 326, "chain_name": "A", "nt_resnum": 327, "nt_name": "G", "nt_code": "G", "nt_id": "///A/327", "linked_nts": [ "///A/326", "///A/328" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,canonical,non-canonical,helix,stem-end,multiplet", "alpha": 71.349, "beta": -174.129, "gamma": 59.572, "delta": 84.017, "epsilon": -113.799, "zeta": -79.587, "epsilon_zeta": -34.213, "bb_type": "--", "chi": 169.543, "glyco_bond": "--", "C5prime_xyz": [ -1.541, 8.215, 2.210 ], "P_xyz": [ 0.659, 7.972, 3.599 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -27.042, "theta": -121.189, "eta_prime": 10.870, "theta_prime": -117.840, "eta_base": 47.856, "theta_base": -82.708, "v0": 1.387, "v1": -22.797, "v2": 34.237, "v3": -34.325, "v4": 20.823, "amplitude": 35.685, "phase_angle": 16.375, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "8d", "suiteness": 0.519, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 142.210, 275.148, 145.999 ], "x_axis": [ -0.047, -0.791, -0.609 ], "y_axis": [ 0.689, -0.468, 0.554 ], "z_axis": [ -0.723, -0.394, 0.568 ], "quaternion": [ 0.513, 0.462, -0.055, -0.722 ] } }, { "index": 1853, "index_chain": 327, "chain_name": "A", "nt_resnum": 328, "nt_name": "C", "nt_code": "C", "nt_id": "///A/328", "linked_nts": [ "///A/327", "///A/329" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -81.187, "beta": 161.151, "gamma": 72.057, "delta": 83.181, "epsilon": -173.645, "zeta": 141.987, "epsilon_zeta": 44.367, "bb_type": "--", "chi": -158.301, "glyco_bond": "anti", "C5prime_xyz": [ -1.519, 8.848, 0.366 ], "P_xyz": [ 1.020, 9.263, -0.080 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 151.545, "theta": 60.455, "eta_prime": 179.504, "theta_prime": -1.244, "eta_base": -125.326, "theta_base": -32.294, "v0": -3.458, "v1": -18.699, "v2": 32.431, "v3": -35.278, "v4": 24.423, "amplitude": 35.502, "phase_angle": 24.010, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.181, "filter_rmsd": 0.064, "frame": { "rmsd": 0.011, "origin": [ 139.173, 273.354, 146.516 ], "x_axis": [ 0.406, -0.912, -0.060 ], "y_axis": [ 0.426, 0.131, 0.895 ], "z_axis": [ -0.808, -0.389, 0.441 ], "quaternion": [ 0.703, 0.457, -0.266, -0.475 ] } }, { "index": 1854, "index_chain": 328, "chain_name": "A", "nt_resnum": 329, "nt_name": "C", "nt_code": "C", "nt_id": "///A/329", "linked_nts": [ "///A/328", "///A/330" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 149.194, "beta": 160.241, "gamma": 61.311, "delta": 82.010, "epsilon": -146.906, "zeta": -71.238, "epsilon_zeta": -75.668, "bb_type": "BI", "chi": -157.065, "glyco_bond": "anti", "C5prime_xyz": [ -1.406, 8.788, 0.347 ], "P_xyz": [ 1.159, 9.075, -0.077 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 48.219, "theta": -138.037, "eta_prime": 104.054, "theta_prime": -139.516, "eta_base": 162.353, "theta_base": -115.084, "v0": 1.587, "v1": -24.268, "v2": 36.407, "v3": -36.371, "v4": 21.910, "amplitude": 37.901, "phase_angle": 16.140, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.067, "frame": { "rmsd": 0.014, "origin": [ 141.954, 270.716, 160.898 ], "x_axis": [ 0.680, -0.017, -0.733 ], "y_axis": [ -0.584, 0.593, -0.555 ], "z_axis": [ 0.444, 0.805, 0.393 ], "quaternion": [ 0.816, -0.417, 0.360, 0.174 ] } }, { "index": 1855, "index_chain": 329, "chain_name": "A", "nt_resnum": 330, "nt_name": "C", "nt_code": "C", "nt_id": "///A/330", "linked_nts": [ "///A/329", "///A/331" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -70.456, "beta": -179.703, "gamma": 57.368, "delta": 78.930, "epsilon": -143.425, "zeta": -73.810, "epsilon_zeta": -69.614, "bb_type": "BI", "chi": -157.969, "glyco_bond": "anti", "C5prime_xyz": [ -1.480, 8.825, 0.395 ], "P_xyz": [ 1.075, 9.378, 0.577 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.265, "theta": -146.174, "eta_prime": -179.018, "theta_prime": -146.065, "eta_base": -139.431, "theta_base": -126.099, "v0": 0.762, "v1": -24.236, "v2": 37.231, "v3": -37.706, "v4": 23.213, "amplitude": 39.017, "phase_angle": 17.406, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.942, "filter_rmsd": 0.067, "frame": { "rmsd": 0.013, "origin": [ 145.532, 273.437, 161.623 ], "x_axis": [ 0.068, 0.082, -0.994 ], "y_axis": [ -0.870, 0.493, -0.019 ], "z_axis": [ 0.489, 0.866, 0.105 ], "quaternion": [ 0.645, -0.343, 0.574, 0.369 ] } }, { "index": 1856, "index_chain": 330, "chain_name": "A", "nt_resnum": 331, "nt_name": "C", "nt_code": "C", "nt_id": "///A/331", "linked_nts": [ "///A/330", "///A/332" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -80.010, "beta": 159.493, "gamma": 80.582, "delta": 75.580, "epsilon": -148.179, "zeta": -67.347, "epsilon_zeta": -80.833, "bb_type": "BI", "chi": -159.418, "glyco_bond": "anti", "C5prime_xyz": [ -1.676, 8.879, 0.428 ], "P_xyz": [ 0.611, 9.643, -0.560 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.012, "theta": -110.006, "eta_prime": 179.446, "theta_prime": -119.114, "eta_base": -145.635, "theta_base": -82.768, "v0": -0.401, "v1": -24.465, "v2": 38.722, "v3": -39.877, "v4": 25.398, "amplitude": 40.971, "phase_angle": 19.075, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.099, "filter_rmsd": 0.064, "frame": { "rmsd": 0.013, "origin": [ 148.304, 275.247, 161.111 ], "x_axis": [ -0.317, 0.258, -0.913 ], "y_axis": [ -0.699, 0.587, 0.409 ], "z_axis": [ 0.641, 0.767, -0.005 ], "quaternion": [ 0.562, -0.159, 0.691, 0.425 ] } }, { "index": 1857, "index_chain": 331, "chain_name": "A", "nt_resnum": 332, "nt_name": "G", "nt_code": "G", "nt_id": "///A/332", "linked_nts": [ "///A/331", "///A/333" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": 150.885, "beta": -151.435, "gamma": -176.183, "delta": 81.982, "epsilon": -149.094, "zeta": -55.949, "epsilon_zeta": -93.145, "bb_type": "BI", "chi": -175.852, "glyco_bond": "anti", "C5prime_xyz": [ -1.507, 8.600, 1.373 ], "P_xyz": [ 0.014, 10.359, 0.138 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.698, "theta": -155.312, "eta_prime": -164.694, "theta_prime": -150.611, "eta_base": -99.835, "theta_base": -109.285, "v0": -0.305, "v1": -21.992, "v2": 34.485, "v3": -35.575, "v4": 22.682, "amplitude": 36.475, "phase_angle": 19.012, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.771, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 148.069, 278.735, 156.707 ], "x_axis": [ -0.836, 0.475, -0.274 ], "y_axis": [ -0.122, 0.326, 0.938 ], "z_axis": [ 0.535, 0.817, -0.215 ], "quaternion": [ 0.262, 0.115, 0.771, 0.569 ] } }, { "index": 1858, "index_chain": 332, "chain_name": "A", "nt_resnum": 333, "nt_name": "U", "nt_code": "U", "nt_id": "///A/333", "linked_nts": [ "///A/332", "///A/334" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -83.009, "beta": -179.539, "gamma": 67.771, "delta": 80.767, "epsilon": -143.269, "zeta": -77.614, "epsilon_zeta": -65.655, "bb_type": "BI", "chi": -162.288, "glyco_bond": "anti", "C5prime_xyz": [ -1.614, 8.792, 0.616 ], "P_xyz": [ 0.918, 9.411, 0.858 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.177, "theta": -145.148, "eta_prime": -170.329, "theta_prime": -141.295, "eta_base": -113.769, "theta_base": -110.031, "v0": -2.653, "v1": -20.159, "v2": 34.074, "v3": -36.460, "v4": 24.669, "amplitude": 36.905, "phase_angle": 22.586, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.479, "filter_rmsd": 0.104, "frame": { "rmsd": 0.012, "origin": [ 148.218, 282.705, 154.506 ], "x_axis": [ -0.660, 0.578, 0.480 ], "y_axis": [ 0.507, -0.129, 0.852 ], "z_axis": [ 0.555, 0.806, -0.208 ], "quaternion": [ 0.028, 0.411, 0.659, 0.629 ] } }, { "index": 1859, "index_chain": 333, "chain_name": "A", "nt_resnum": 334, "nt_name": "A", "nt_code": "A", "nt_id": "///A/334", "linked_nts": [ "///A/333", "///A/335" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -56.914, "beta": 179.300, "gamma": 49.039, "delta": 82.969, "epsilon": -174.410, "zeta": 21.742, "epsilon_zeta": 163.848, "bb_type": "--", "chi": -165.031, "glyco_bond": "anti", "C5prime_xyz": [ -1.255, 8.581, 0.864 ], "P_xyz": [ 1.262, 8.840, 1.548 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.266, "theta": -86.628, "eta_prime": -170.859, "theta_prime": -96.511, "eta_base": -128.002, "theta_base": -53.435, "v0": 2.996, "v1": -23.756, "v2": 34.324, "v3": -33.637, "v4": 19.377, "amplitude": 35.369, "phase_angle": 13.961, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.895, "filter_rmsd": 0.038, "frame": { "rmsd": 0.014, "origin": [ 150.034, 287.954, 153.878 ], "x_axis": [ -0.352, 0.124, 0.928 ], "y_axis": [ 0.663, -0.667, 0.341 ], "z_axis": [ 0.660, 0.735, 0.153 ], "quaternion": [ -0.183, 0.539, 0.365, 0.737 ] } }, { "index": 1860, "index_chain": 334, "chain_name": "A", "nt_resnum": 335, "nt_name": "C", "nt_code": "C", "nt_id": "///A/335", "linked_nts": [ "///A/334", "///A/336" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -161.199, "beta": 116.834, "gamma": 145.080, "delta": 83.565, "epsilon": -129.118, "zeta": -101.582, "epsilon_zeta": -27.536, "bb_type": "--", "chi": -169.208, "glyco_bond": "anti", "C5prime_xyz": [ -1.057, 8.541, 1.147 ], "P_xyz": [ -0.238, 10.257, -0.606 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.228, "theta": -154.374, "eta_prime": -166.654, "theta_prime": -155.039, "eta_base": -91.594, "theta_base": -116.342, "v0": 5.204, "v1": -26.205, "v2": 36.283, "v3": -34.217, "v4": 18.269, "amplitude": 36.923, "phase_angle": 10.689, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.072, "frame": { "rmsd": 0.014, "origin": [ 150.911, 289.702, 159.344 ], "x_axis": [ 0.450, -0.338, 0.827 ], "y_axis": [ 0.786, -0.290, -0.546 ], "z_axis": [ 0.424, 0.895, 0.135 ], "quaternion": [ 0.569, -0.634, -0.177, -0.494 ] } }, { "index": 1861, "index_chain": 335, "chain_name": "A", "nt_resnum": 336, "nt_name": "G", "nt_code": "G", "nt_id": "///A/336", "linked_nts": [ "///A/335", "///A/337" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 140.309, "beta": -131.178, "gamma": 173.863, "delta": 82.089, "epsilon": -98.323, "zeta": -112.595, "epsilon_zeta": 14.272, "bb_type": "--", "chi": -178.647, "glyco_bond": "anti", "C5prime_xyz": [ -1.391, 8.465, 1.613 ], "P_xyz": [ 0.509, 9.633, 0.257 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.622, "theta": -135.407, "eta_prime": -179.932, "theta_prime": -146.171, "eta_base": -126.849, "theta_base": -136.271, "v0": 2.193, "v1": -23.925, "v2": 35.357, "v3": -35.076, "v4": 20.742, "amplitude": 36.651, "phase_angle": 15.267, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.082, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 152.519, 291.653, 162.026 ], "x_axis": [ 0.740, -0.612, 0.278 ], "y_axis": [ 0.431, 0.115, -0.895 ], "z_axis": [ 0.516, 0.782, 0.349 ], "quaternion": [ 0.742, -0.565, 0.080, -0.351 ] } }, { "index": 1862, "index_chain": 336, "chain_name": "A", "nt_resnum": 337, "nt_name": "C", "nt_code": "C", "nt_id": "///A/337", "linked_nts": [ "///A/336", "///A/338" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix-end,stem-end", "alpha": 83.247, "beta": -115.704, "gamma": -137.540, "delta": 82.926, "epsilon": -159.058, "zeta": 13.504, "epsilon_zeta": 187.438, "bb_type": "--", "chi": -171.731, "glyco_bond": "anti", "C5prime_xyz": [ -1.070, 8.535, 1.280 ], "P_xyz": [ -0.459, 10.558, -0.248 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.171, "theta": -132.204, "eta_prime": -175.675, "theta_prime": -141.900, "eta_base": -146.011, "theta_base": -107.386, "v0": 3.884, "v1": -24.864, "v2": 35.420, "v3": -34.072, "v4": 19.040, "amplitude": 36.294, "phase_angle": 12.598, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.071, "frame": { "rmsd": 0.013, "origin": [ 153.671, 293.280, 165.451 ], "x_axis": [ 0.864, -0.504, -0.026 ], "y_axis": [ 0.234, 0.446, -0.864 ], "z_axis": [ 0.447, 0.740, 0.503 ], "quaternion": [ 0.839, -0.478, 0.141, -0.220 ] } }, { "index": 1863, "index_chain": 337, "chain_name": "A", "nt_resnum": 338, "nt_name": "G", "nt_code": "G", "nt_id": "///A/338", "linked_nts": [ "///A/337", "///A/339" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -171.277, "beta": 98.292, "gamma": 163.570, "delta": 84.500, "epsilon": -95.758, "zeta": -129.517, "epsilon_zeta": 33.759, "bb_type": "--", "chi": -179.625, "glyco_bond": "anti", "C5prime_xyz": [ -0.913, 8.203, 1.712 ], "P_xyz": [ -0.644, 10.509, 0.510 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.344, "theta": 146.734, "eta_prime": 175.125, "theta_prime": 174.925, "eta_base": -131.084, "theta_base": 163.717, "v0": 9.718, "v1": -29.861, "v2": 37.533, "v3": -32.974, "v4": 14.733, "amplitude": 37.626, "phase_angle": 4.025, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 157.870, 293.288, 168.035 ], "x_axis": [ 0.756, -0.197, -0.624 ], "y_axis": [ -0.325, 0.715, -0.619 ], "z_axis": [ 0.568, 0.671, 0.476 ], "quaternion": [ 0.858, -0.376, 0.347, 0.037 ] } }, { "index": 1864, "index_chain": 338, "chain_name": "A", "nt_resnum": 339, "nt_name": "A", "nt_code": "A", "nt_id": "///A/339", "linked_nts": [ "///A/338", "///A/340" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,helix-end,multiplet", "alpha": -43.745, "beta": 161.011, "gamma": 39.968, "delta": 143.271, "epsilon": -130.885, "zeta": 175.069, "epsilon_zeta": 54.046, "bb_type": "BII", "chi": -123.056, "glyco_bond": "anti", "C5prime_xyz": [ -1.997, 8.573, -1.140 ], "P_xyz": [ 0.350, 9.506, -0.430 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -176.501, "theta": 154.014, "eta_prime": -164.495, "theta_prime": 147.985, "eta_base": 170.218, "theta_base": 157.970, "v0": -22.951, "v1": 35.408, "v2": -33.764, "v3": 21.402, "v4": 0.752, "amplitude": 35.918, "phase_angle": 160.055, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.012, "origin": [ 157.865, 295.024, 173.787 ], "x_axis": [ 0.210, -0.586, -0.783 ], "y_axis": [ -0.152, 0.771, -0.618 ], "z_axis": [ 0.966, 0.249, 0.073 ], "quaternion": [ 0.717, -0.302, 0.610, -0.151 ] } }, { "index": 1865, "index_chain": 339, "chain_name": "A", "nt_resnum": 340, "nt_name": "A", "nt_code": "A", "nt_id": "///A/340", "linked_nts": [ "///A/339", "///A/341" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,BI,non-canonical,helix-end,multiplet", "alpha": -95.310, "beta": -178.503, "gamma": 26.055, "delta": 79.660, "epsilon": -132.753, "zeta": -42.281, "epsilon_zeta": -90.472, "bb_type": "BI", "chi": 24.758, "glyco_bond": "syn", "C5prime_xyz": [ -5.519, 3.670, -0.332 ], "P_xyz": [ -5.840, 1.225, -1.230 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.257, "theta": -112.182, "eta_prime": 141.336, "theta_prime": -98.443, "eta_base": 149.169, "theta_base": -91.828, "v0": 0.446, "v1": -23.625, "v2": 36.415, "v3": -37.229, "v4": 23.114, "amplitude": 38.275, "phase_angle": 17.934, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.049, "filter_rmsd": 0.042, "frame": { "rmsd": 0.017, "origin": [ 156.909, 299.512, 176.485 ], "x_axis": [ 0.100, -0.724, 0.683 ], "y_axis": [ -0.384, 0.605, 0.698 ], "z_axis": [ -0.918, -0.332, -0.217 ], "quaternion": [ 0.610, 0.422, -0.656, -0.139 ] } }, { "index": 1866, "index_chain": 340, "chain_name": "A", "nt_resnum": 341, "nt_name": "A", "nt_code": "A", "nt_id": "///A/341", "linked_nts": [ "///A/340", "///A/342" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -85.787, "beta": 160.874, "gamma": 86.427, "delta": 83.295, "epsilon": -104.375, "zeta": -122.035, "epsilon_zeta": 17.660, "bb_type": "--", "chi": -166.180, "glyco_bond": "anti", "C5prime_xyz": [ -1.138, 8.519, 0.914 ], "P_xyz": [ 1.302, 8.853, 0.011 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.231, "theta": -131.968, "eta_prime": -149.570, "theta_prime": -146.169, "eta_base": -122.745, "theta_base": -144.456, "v0": 6.075, "v1": -27.425, "v2": 37.240, "v3": -34.656, "v4": 18.111, "amplitude": 37.762, "phase_angle": 9.543, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.014, "origin": [ 160.383, 298.726, 175.568 ], "x_axis": [ 0.067, 0.383, -0.921 ], "y_axis": [ -0.222, 0.906, 0.361 ], "z_axis": [ 0.973, 0.180, 0.146 ], "quaternion": [ 0.728, 0.062, 0.651, 0.208 ] } }, { "index": 1867, "index_chain": 341, "chain_name": "A", "nt_resnum": 342, "nt_name": "G", "nt_code": "G", "nt_id": "///A/342", "linked_nts": [ "///A/341", "///A/343" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 86.910, "beta": -117.128, "gamma": -152.466, "delta": 81.906, "epsilon": -135.826, "zeta": -59.077, "epsilon_zeta": -76.748, "bb_type": "BI", "chi": 173.630, "glyco_bond": "anti", "C5prime_xyz": [ -1.015, 8.093, 2.049 ], "P_xyz": [ 0.151, 10.077, 0.810 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.423, "theta": -158.773, "eta_prime": 170.147, "theta_prime": -152.045, "eta_base": -166.019, "theta_base": -116.713, "v0": 8.712, "v1": -30.323, "v2": 39.415, "v3": -35.297, "v4": 16.750, "amplitude": 39.641, "phase_angle": 6.123, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 164.454, 297.419, 175.436 ], "x_axis": [ -0.255, 0.538, -0.804 ], "y_axis": [ -0.238, 0.771, 0.591 ], "z_axis": [ 0.937, 0.342, -0.068 ], "quaternion": [ 0.602, 0.103, 0.723, 0.323 ] } }, { "index": 1868, "index_chain": 342, "chain_name": "A", "nt_resnum": 343, "nt_name": "G", "nt_code": "G", "nt_id": "///A/343", "linked_nts": [ "///A/342", "///A/344" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -70.052, "beta": -172.770, "gamma": 53.508, "delta": 76.842, "epsilon": -115.731, "zeta": -75.715, "epsilon_zeta": -40.016, "bb_type": "--", "chi": -174.649, "glyco_bond": "anti", "C5prime_xyz": [ -1.456, 8.564, 1.360 ], "P_xyz": [ 0.980, 8.944, 2.215 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.980, "theta": -138.625, "eta_prime": -170.121, "theta_prime": -136.462, "eta_base": -121.962, "theta_base": -119.686, "v0": 3.011, "v1": -26.878, "v2": 39.384, "v3": -38.705, "v4": 22.487, "amplitude": 40.676, "phase_angle": 14.480, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.782, "filter_rmsd": 0.010, "frame": { "rmsd": 0.010, "origin": [ 168.009, 298.756, 172.403 ], "x_axis": [ -0.404, 0.898, -0.174 ], "y_axis": [ -0.139, 0.128, 0.982 ], "z_axis": [ 0.904, 0.421, 0.073 ], "quaternion": [ 0.446, 0.314, 0.604, 0.581 ] } }, { "index": 1869, "index_chain": 343, "chain_name": "A", "nt_resnum": 344, "nt_name": "A", "nt_code": "A", "nt_id": "///A/344", "linked_nts": [ "///A/343", "///A/345" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -88.772, "beta": 121.591, "gamma": 119.668, "delta": 79.552, "epsilon": -132.982, "zeta": -75.981, "epsilon_zeta": -57.001, "bb_type": "BI", "chi": -173.588, "glyco_bond": "anti", "C5prime_xyz": [ -1.598, 8.570, 1.276 ], "P_xyz": [ -0.195, 9.870, -0.511 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.283, "theta": -155.714, "eta_prime": -169.623, "theta_prime": -154.787, "eta_base": -139.212, "theta_base": -114.080, "v0": 0.703, "v1": -24.033, "v2": 36.993, "v3": -37.569, "v4": 23.241, "amplitude": 38.806, "phase_angle": 17.581, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.008, "origin": [ 170.323, 300.311, 170.403 ], "x_axis": [ -0.298, 0.942, 0.152 ], "y_axis": [ 0.247, -0.078, 0.966 ], "z_axis": [ 0.922, 0.326, -0.209 ], "quaternion": [ 0.322, 0.497, 0.598, 0.540 ] } }, { "index": 1870, "index_chain": 344, "chain_name": "A", "nt_resnum": 345, "nt_name": "U", "nt_code": "U", "nt_id": "///A/345", "linked_nts": [ "///A/344", "///A/346" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -55.523, "beta": 159.385, "gamma": 61.281, "delta": 78.764, "epsilon": -133.931, "zeta": -45.360, "epsilon_zeta": -88.571, "bb_type": "BI", "chi": -155.214, "glyco_bond": "anti", "C5prime_xyz": [ -1.584, 8.817, 0.230 ], "P_xyz": [ 0.955, 9.318, -0.169 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.185, "theta": -120.652, "eta_prime": -168.526, "theta_prime": -135.469, "eta_base": -112.711, "theta_base": -126.895, "v0": -0.761, "v1": -22.214, "v2": 35.533, "v3": -36.924, "v4": 23.775, "amplitude": 37.752, "phase_angle": 19.741, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.726, "filter_rmsd": 0.105, "frame": { "rmsd": 0.007, "origin": [ 172.319, 303.562, 169.438 ], "x_axis": [ 0.054, 0.682, 0.729 ], "y_axis": [ 0.532, -0.638, 0.557 ], "z_axis": [ 0.845, 0.358, -0.398 ], "quaternion": [ 0.069, 0.723, 0.420, 0.544 ] } }, { "index": 1871, "index_chain": 345, "chain_name": "A", "nt_resnum": 346, "nt_name": "C", "nt_code": "C", "nt_id": "///A/346", "linked_nts": [ "///A/345", "///A/347" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -136.917, "beta": 122.026, "gamma": 144.975, "delta": 81.122, "epsilon": -125.877, "zeta": -35.126, "epsilon_zeta": -90.751, "bb_type": "--", "chi": -164.821, "glyco_bond": "anti", "C5prime_xyz": [ -1.291, 8.739, 0.829 ], "P_xyz": [ -0.577, 10.374, -1.080 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.006, "theta": -141.528, "eta_prime": 172.712, "theta_prime": -139.750, "eta_base": -161.476, "theta_base": -97.767, "v0": 1.305, "v1": -23.295, "v2": 35.255, "v3": -35.429, "v4": 21.518, "amplitude": 36.788, "phase_angle": 16.601, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.010, "filter_rmsd": 0.066, "frame": { "rmsd": 0.007, "origin": [ 173.782, 306.490, 168.192 ], "x_axis": [ 0.008, 0.315, 0.949 ], "y_axis": [ 0.665, -0.711, 0.230 ], "z_axis": [ 0.747, 0.629, -0.215 ], "quaternion": [ -0.144, 0.695, 0.352, 0.610 ] } }, { "index": 1872, "index_chain": 346, "chain_name": "A", "nt_resnum": 347, "nt_name": "U", "nt_code": "U", "nt_id": "///A/347", "linked_nts": [ "///A/346", "///A/348" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -121.810, "beta": 130.056, "gamma": 136.937, "delta": 76.517, "epsilon": -170.636, "zeta": 38.864, "epsilon_zeta": 150.499, "bb_type": "--", "chi": -167.850, "glyco_bond": "anti", "C5prime_xyz": [ -1.416, 8.666, 0.989 ], "P_xyz": [ -0.508, 10.324, -0.827 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.661, "theta": -108.809, "eta_prime": -164.883, "theta_prime": -152.256, "eta_base": -98.307, "theta_base": 146.726, "v0": 2.619, "v1": -26.214, "v2": 38.828, "v3": -38.206, "v4": 22.361, "amplitude": 40.173, "phase_angle": 14.872, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.108, "frame": { "rmsd": 0.008, "origin": [ 175.711, 309.291, 171.589 ], "x_axis": [ 0.486, -0.150, 0.861 ], "y_axis": [ 0.684, -0.549, -0.481 ], "z_axis": [ 0.545, 0.822, -0.164 ], "quaternion": [ -0.440, 0.741, 0.180, 0.474 ] } }, { "index": 1873, "index_chain": 347, "chain_name": "A", "nt_resnum": 348, "nt_name": "U", "nt_code": "U", "nt_id": "///A/348", "linked_nts": [ "///A/347", "///A/349" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -106.406, "beta": -74.683, "gamma": -132.645, "delta": 154.130, "epsilon": -18.799, "zeta": -170.254, "epsilon_zeta": 151.455, "bb_type": "--", "chi": -113.871, "glyco_bond": "anti", "C5prime_xyz": [ -2.242, 8.341, -1.357 ], "P_xyz": [ -2.524, 8.440, -4.011 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.831, "theta": 178.847, "eta_prime": 157.136, "theta_prime": -143.306, "eta_base": 97.506, "theta_base": -102.543, "v0": -21.825, "v1": 38.822, "v2": -40.022, "v3": 28.476, "v4": -4.399, "amplitude": 41.027, "phase_angle": 167.294, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.095, "frame": { "rmsd": 0.015, "origin": [ 172.531, 314.608, 166.815 ], "x_axis": [ -0.660, -0.729, 0.181 ], "y_axis": [ 0.744, -0.599, 0.296 ], "z_axis": [ -0.107, 0.330, 0.938 ], "quaternion": [ -0.412, 0.021, 0.175, 0.894 ] } }, { "index": 1874, "index_chain": 348, "chain_name": "A", "nt_resnum": 349, "nt_name": "U", "nt_code": "U", "nt_id": "///A/349", "linked_nts": [ "///A/348", "///A/350" ], "nt_type": "RNA", "dbn": ".", "summary": "BI,canonical,non-canonical,helix,stem-end", "alpha": -62.883, "beta": 121.475, "gamma": 36.664, "delta": 145.838, "epsilon": -162.828, "zeta": -76.564, "epsilon_zeta": -86.264, "bb_type": "BI", "chi": -74.940, "glyco_bond": "--", "C5prime_xyz": [ -3.409, 7.130, -2.818 ], "P_xyz": [ -0.942, 7.527, -3.620 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 125.804, "theta": -105.972, "eta_prime": -158.875, "theta_prime": -161.922, "eta_base": -123.721, "theta_base": -124.052, "v0": -26.994, "v1": 41.018, "v2": -38.471, "v3": 23.802, "v4": 1.730, "amplitude": 41.265, "phase_angle": 158.794, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.104, "frame": { "rmsd": 0.009, "origin": [ 177.903, 313.308, 174.736 ], "x_axis": [ 0.278, -0.960, 0.044 ], "y_axis": [ 0.772, 0.196, -0.604 ], "z_axis": [ 0.571, 0.201, 0.796 ], "quaternion": [ 0.753, -0.267, 0.175, -0.575 ] } }, { "index": 1875, "index_chain": 349, "chain_name": "A", "nt_resnum": 350, "nt_name": "G", "nt_code": "G", "nt_id": "///A/350", "linked_nts": [ "///A/349", "///A/351" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -135.720, "beta": 96.413, "gamma": 135.123, "delta": 74.299, "epsilon": -133.975, "zeta": -121.358, "epsilon_zeta": -12.617, "bb_type": "--", "chi": -178.056, "glyco_bond": "anti", "C5prime_xyz": [ -1.567, 8.651, 1.532 ], "P_xyz": [ -0.930, 10.221, -0.488 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 144.675, "theta": 169.304, "eta_prime": 147.453, "theta_prime": 178.951, "eta_base": -160.071, "theta_base": -151.787, "v0": -0.239, "v1": -24.286, "v2": 38.403, "v3": -39.519, "v4": 25.013, "amplitude": 40.594, "phase_angle": 18.908, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 181.788, 312.657, 178.001 ], "x_axis": [ 0.275, -0.758, -0.591 ], "y_axis": [ 0.277, 0.651, -0.707 ], "z_axis": [ 0.921, 0.031, 0.389 ], "quaternion": [ 0.761, -0.242, 0.497, -0.340 ] } }, { "index": 1876, "index_chain": 350, "chain_name": "A", "nt_resnum": 351, "nt_name": "A", "nt_code": "A", "nt_id": "///A/351", "linked_nts": [ "///A/350", "///A/352" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 5.043, "beta": 124.938, "gamma": 23.527, "delta": 78.982, "epsilon": -146.570, "zeta": -89.826, "epsilon_zeta": -56.744, "bb_type": "BI", "chi": -162.404, "glyco_bond": "anti", "C5prime_xyz": [ -1.746, 8.753, 0.647 ], "P_xyz": [ 0.803, 8.730, 1.230 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.164, "theta": -148.400, "eta_prime": -175.603, "theta_prime": -148.326, "eta_base": -142.423, "theta_base": -123.325, "v0": -1.155, "v1": -22.017, "v2": 35.522, "v3": -37.202, "v4": 24.154, "amplitude": 37.881, "phase_angle": 20.324, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.036, "frame": { "rmsd": 0.009, "origin": [ 184.337, 311.418, 179.977 ], "x_axis": [ 0.268, -0.322, -0.908 ], "y_axis": [ 0.156, 0.945, -0.289 ], "z_axis": [ 0.951, -0.064, 0.303 ], "quaternion": [ 0.793, -0.071, 0.586, -0.151 ] } }, { "index": 1877, "index_chain": 351, "chain_name": "A", "nt_resnum": 352, "nt_name": "A", "nt_code": "A", "nt_id": "///A/352", "linked_nts": [ "///A/351", "///A/353" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -48.605, "beta": 160.655, "gamma": 45.869, "delta": 77.915, "epsilon": -125.473, "zeta": -57.053, "epsilon_zeta": -68.421, "bb_type": "--", "chi": -158.449, "glyco_bond": "anti", "C5prime_xyz": [ -1.234, 8.646, 0.430 ], "P_xyz": [ 1.369, 8.817, 0.296 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.344, "theta": -124.282, "eta_prime": 179.606, "theta_prime": -125.937, "eta_base": -143.787, "theta_base": -109.346, "v0": 6.142, "v1": -29.197, "v2": 40.117, "v3": -37.587, "v4": 19.775, "amplitude": 40.750, "phase_angle": 10.113, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.571, "filter_rmsd": 0.037, "frame": { "rmsd": 0.009, "origin": [ 187.649, 310.077, 180.985 ], "x_axis": [ 0.326, 0.231, -0.917 ], "y_axis": [ 0.048, 0.964, 0.261 ], "z_axis": [ 0.944, -0.129, 0.303 ], "quaternion": [ 0.805, 0.121, 0.578, 0.057 ] } }, { "index": 1878, "index_chain": 352, "chain_name": "A", "nt_resnum": 353, "nt_name": "G", "nt_code": "G", "nt_id": "///A/353", "linked_nts": [ "///A/352", "///A/354" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -97.800, "beta": 126.815, "gamma": 136.701, "delta": 82.386, "epsilon": -123.544, "zeta": -68.188, "epsilon_zeta": -55.356, "bb_type": "--", "chi": 175.865, "glyco_bond": "anti", "C5prime_xyz": [ -1.456, 8.410, 1.872 ], "P_xyz": [ 0.027, 10.216, 0.664 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -169.388, "theta": -154.098, "eta_prime": -155.189, "theta_prime": -145.750, "eta_base": -118.221, "theta_base": -87.001, "v0": -0.090, "v1": -21.610, "v2": 33.794, "v3": -34.766, "v4": 22.014, "amplitude": 35.684, "phase_angle": 18.727, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 191.717, 308.678, 179.200 ], "x_axis": [ 0.215, 0.650, -0.729 ], "y_axis": [ -0.090, 0.756, 0.648 ], "z_axis": [ 0.973, -0.074, 0.221 ], "quaternion": [ 0.740, 0.244, 0.575, 0.250 ] } }, { "index": 1879, "index_chain": 353, "chain_name": "A", "nt_resnum": 354, "nt_name": "U", "nt_code": "U", "nt_id": "///A/354", "linked_nts": [ "///A/353", "///A/355" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -69.449, "beta": 153.163, "gamma": 71.476, "delta": 83.174, "epsilon": -146.439, "zeta": -77.796, "epsilon_zeta": -68.643, "bb_type": "BI", "chi": -155.431, "glyco_bond": "anti", "C5prime_xyz": [ -1.589, 8.786, 0.231 ], "P_xyz": [ 0.897, 9.171, -0.514 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.627, "theta": -143.915, "eta_prime": -169.645, "theta_prime": -146.094, "eta_base": -92.238, "theta_base": -102.521, "v0": -0.558, "v1": -21.038, "v2": 33.337, "v3": -34.528, "v4": 22.178, "amplitude": 35.354, "phase_angle": 19.447, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.330, "filter_rmsd": 0.103, "frame": { "rmsd": 0.010, "origin": [ 195.025, 310.492, 178.091 ], "x_axis": [ 0.317, 0.945, 0.077 ], "y_axis": [ -0.010, -0.078, 0.997 ], "z_axis": [ 0.948, -0.317, -0.015 ], "quaternion": [ 0.553, 0.594, 0.394, 0.432 ] } }, { "index": 1880, "index_chain": 354, "chain_name": "A", "nt_resnum": 355, "nt_name": "G", "nt_code": "G", "nt_id": "///A/355", "linked_nts": [ "///A/354", "///A/356" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -61.845, "beta": 165.714, "gamma": 55.742, "delta": 88.700, "epsilon": -153.038, "zeta": 29.974, "epsilon_zeta": 176.988, "bb_type": "--", "chi": -141.877, "glyco_bond": "anti", "C5prime_xyz": [ -1.135, 8.711, -0.458 ], "P_xyz": [ 1.480, 8.748, -0.696 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.984, "theta": -29.768, "eta_prime": -172.636, "theta_prime": -64.951, "eta_base": -115.124, "theta_base": -87.710, "v0": 1.702, "v1": -19.837, "v2": 29.392, "v3": -29.237, "v4": 17.472, "amplitude": 30.508, "phase_angle": 15.549, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.805, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 198.138, 311.149, 178.431 ], "x_axis": [ 0.146, 0.661, 0.736 ], "y_axis": [ 0.031, -0.747, 0.664 ], "z_axis": [ 0.989, -0.074, -0.130 ], "quaternion": [ 0.260, 0.711, 0.243, 0.606 ] } }, { "index": 1881, "index_chain": 355, "chain_name": "A", "nt_resnum": 356, "nt_name": "A", "nt_code": "A", "nt_id": "///A/356", "linked_nts": [ "///A/355", "///A/357" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -179.050, "beta": 174.639, "gamma": 36.759, "delta": 142.105, "epsilon": -98.705, "zeta": 84.940, "epsilon_zeta": 176.355, "bb_type": "--", "chi": -138.190, "glyco_bond": "anti", "C5prime_xyz": [ -2.123, 8.690, -0.331 ], "P_xyz": [ -0.232, 9.833, 1.043 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 71.814, "theta": 119.666, "eta_prime": 126.303, "theta_prime": 83.855, "eta_base": 139.386, "theta_base": 52.248, "v0": -24.196, "v1": 36.235, "v2": -33.698, "v3": 20.676, "v4": 1.974, "amplitude": 36.324, "phase_angle": 158.083, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "5z", "suiteness": 0.318, "filter_rmsd": 0.037, "frame": { "rmsd": 0.017, "origin": [ 201.487, 312.503, 180.402 ], "x_axis": [ -0.321, -0.097, -0.942 ], "y_axis": [ 0.110, -0.992, 0.064 ], "z_axis": [ -0.941, -0.083, 0.329 ], "quaternion": [ -0.064, -0.579, -0.006, 0.813 ] } }, { "index": 1882, "index_chain": 356, "chain_name": "A", "nt_resnum": 357, "nt_name": "A", "nt_code": "A", "nt_id": "///A/357", "linked_nts": [ "///A/356", "///A/358" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix-end", "alpha": 80.766, "beta": -152.652, "gamma": 164.105, "delta": 78.067, "epsilon": -120.735, "zeta": -68.090, "epsilon_zeta": -52.646, "bb_type": "--", "chi": -104.664, "glyco_bond": "anti", "C5prime_xyz": [ -2.128, 7.835, -2.462 ], "P_xyz": [ -1.717, 7.164, -4.955 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 132.543, "theta": -107.798, "eta_prime": 125.054, "theta_prime": -119.502, "eta_base": 110.958, "theta_base": -121.383, "v0": 3.999, "v1": -26.429, "v2": 37.908, "v3": -36.527, "v4": 20.472, "amplitude": 38.878, "phase_angle": 12.831, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "6n", "suiteness": 0.464, "filter_rmsd": 0.041, "frame": { "rmsd": 0.021, "origin": [ 205.884, 307.382, 178.790 ], "x_axis": [ -0.142, 0.990, -0.014 ], "y_axis": [ 0.279, 0.053, 0.959 ], "z_axis": [ 0.950, 0.133, -0.283 ], "quaternion": [ 0.396, 0.521, 0.608, 0.449 ] } }, { "index": 1883, "index_chain": 357, "chain_name": "A", "nt_resnum": 358, "nt_name": "A", "nt_code": "A", "nt_id": "///A/358", "linked_nts": [ "///A/357", "///A/359" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 102.581, "beta": -134.277, "gamma": -61.725, "delta": 151.312, "epsilon": -154.945, "zeta": -139.007, "epsilon_zeta": -15.939, "bb_type": "--", "chi": -127.587, "glyco_bond": "anti", "C5prime_xyz": [ -1.711, 8.578, -0.715 ], "P_xyz": [ -1.798, 11.183, -1.136 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -101.109, "theta": -176.013, "eta_prime": -77.650, "theta_prime": -161.554, "eta_base": -75.050, "theta_base": -78.605, "v0": -20.171, "v1": 36.825, "v2": -38.348, "v3": 27.545, "v4": -4.832, "amplitude": 39.174, "phase_angle": 168.218, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.008, "origin": [ 209.430, 316.526, 181.743 ], "x_axis": [ -0.324, 0.644, 0.693 ], "y_axis": [ 0.052, -0.719, 0.693 ], "z_axis": [ 0.945, 0.260, 0.199 ], "quaternion": [ 0.198, 0.547, 0.318, 0.749 ] } }, { "index": 1884, "index_chain": 358, "chain_name": "A", "nt_resnum": 359, "nt_name": "U", "nt_code": "U", "nt_id": "///A/359", "linked_nts": [ "///A/358", "///A/360" ], "nt_type": "RNA", "dbn": ".", "summary": "", "alpha": 23.573, "beta": 136.852, "gamma": -21.977, "delta": 144.212, "epsilon": -152.794, "zeta": 111.215, "epsilon_zeta": 95.991, "bb_type": "--", "chi": 95.086, "glyco_bond": "--", "C5prime_xyz": [ -4.670, 5.714, 2.530 ], "P_xyz": [ -6.607, 3.954, 2.548 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.256, "theta": 74.102, "eta_prime": -172.308, "theta_prime": 83.769, "eta_base": -87.810, "theta_base": 88.058, "v0": -22.948, "v1": 35.565, "v2": -33.829, "v3": 21.553, "v4": 0.694, "amplitude": 35.973, "phase_angle": 160.117, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.114, "frame": { "rmsd": 0.019, "origin": [ 213.102, 315.753, 185.820 ], "x_axis": [ -0.340, 0.916, -0.211 ], "y_axis": [ 0.135, -0.175, -0.975 ], "z_axis": [ -0.931, -0.360, -0.064 ], "quaternion": [ 0.324, -0.474, -0.554, 0.602 ] } }, { "index": 1885, "index_chain": 359, "chain_name": "A", "nt_resnum": 360, "nt_name": "C", "nt_code": "C", "nt_id": "///A/360", "linked_nts": [ "///A/359", "///A/361" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": -109.010, "beta": -159.307, "gamma": 44.088, "delta": 128.195, "epsilon": 33.426, "zeta": -77.540, "epsilon_zeta": -249.034, "bb_type": "--", "chi": -148.979, "glyco_bond": "anti", "C5prime_xyz": [ -1.163, 8.575, 0.256 ], "P_xyz": [ 0.718, 8.819, 2.054 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -177.310, "theta": 80.057, "eta_prime": -161.443, "theta_prime": 65.791, "eta_base": -161.499, "theta_base": 72.869, "v0": -12.275, "v1": 19.485, "v2": -19.025, "v3": 12.497, "v4": -0.276, "amplitude": 20.000, "phase_angle": 162.034, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "0b", "suiteness": 0.010, "filter_rmsd": 0.063, "frame": { "rmsd": 0.010, "origin": [ 213.655, 309.161, 171.378 ], "x_axis": [ -0.651, 0.671, 0.356 ], "y_axis": [ 0.365, -0.134, 0.921 ], "z_axis": [ 0.666, 0.730, -0.157 ], "quaternion": [ 0.120, 0.400, 0.647, 0.638 ] } }, { "index": 1886, "index_chain": 360, "chain_name": "A", "nt_resnum": 361, "nt_name": "A", "nt_code": "A", "nt_id": "///A/361", "linked_nts": [ "///A/360", "///A/362" ], "nt_type": "RNA", "dbn": ".", "summary": "non-canonical,helix-end", "alpha": -45.542, "beta": 157.228, "gamma": 82.237, "delta": 153.994, "epsilon": -93.699, "zeta": -77.472, "epsilon_zeta": -16.227, "bb_type": "--", "chi": -76.676, "glyco_bond": "--", "C5prime_xyz": [ -2.111, 6.947, -2.944 ], "P_xyz": [ 0.276, 6.049, -3.715 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -172.650, "theta": -55.856, "eta_prime": -142.662, "theta_prime": -93.403, "eta_base": -157.363, "theta_base": -20.499, "v0": -10.889, "v1": 28.757, "v2": -34.590, "v3": 29.100, "v4": -11.655, "amplitude": 34.591, "phase_angle": 180.597, "puckering": "C3'-exo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.016, "origin": [ 213.187, 304.951, 177.401 ], "x_axis": [ -0.104, -0.390, -0.915 ], "y_axis": [ 0.846, -0.519, 0.125 ], "z_axis": [ -0.524, -0.761, 0.384 ], "quaternion": [ -0.436, -0.508, -0.224, 0.708 ] } }, { "index": 1887, "index_chain": 361, "chain_name": "A", "nt_resnum": 362, "nt_name": "A", "nt_code": "A", "nt_id": "///A/362", "linked_nts": [ "///A/361", "///A/363" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical", "alpha": -70.432, "beta": -127.225, "gamma": 70.422, "delta": 145.128, "epsilon": -141.684, "zeta": -147.300, "epsilon_zeta": 5.616, "bb_type": "--", "chi": -153.222, "glyco_bond": "anti", "C5prime_xyz": [ -2.188, 8.733, 0.503 ], "P_xyz": [ -0.976, 8.908, 2.827 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -154.166, "theta": -167.100, "eta_prime": -106.683, "theta_prime": 171.137, "eta_base": -148.642, "theta_base": 175.439, "v0": -24.888, "v1": 38.453, "v2": -36.518, "v3": 23.087, "v4": 0.867, "amplitude": 38.886, "phase_angle": 159.903, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "2[", "suiteness": 0.439, "filter_rmsd": 0.041, "frame": { "rmsd": 0.015, "origin": [ 230.234, 300.212, 184.677 ], "x_axis": [ 0.311, 0.221, -0.925 ], "y_axis": [ -0.949, 0.013, -0.316 ], "z_axis": [ -0.057, 0.975, 0.214 ], "quaternion": [ 0.620, -0.520, 0.350, 0.472 ] } }, { "index": 1888, "index_chain": 362, "chain_name": "A", "nt_resnum": 363, "nt_name": "G", "nt_code": "G", "nt_id": "///A/363", "linked_nts": [ "///A/362", "///A/364" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": -79.196, "beta": 91.419, "gamma": -175.263, "delta": 143.920, "epsilon": -148.685, "zeta": 152.729, "epsilon_zeta": 58.585, "bb_type": "--", "chi": -102.683, "glyco_bond": "anti", "C5prime_xyz": [ -2.611, 8.188, -2.002 ], "P_xyz": [ -3.897, 8.472, -4.268 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -54.677, "theta": 42.431, "eta_prime": -88.516, "theta_prime": 67.943, "eta_base": -105.287, "theta_base": 90.453, "v0": -25.929, "v1": 38.213, "v2": -35.115, "v3": 21.071, "v4": 2.814, "amplitude": 38.149, "phase_angle": 156.995, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "4s", "suiteness": 0.063, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 231.343, 296.212, 190.620 ], "x_axis": [ 0.256, 0.055, 0.965 ], "y_axis": [ -0.965, -0.047, 0.259 ], "z_axis": [ 0.060, -0.997, 0.041 ], "quaternion": [ 0.559, 0.562, -0.405, 0.456 ] } }, { "index": 1889, "index_chain": 363, "chain_name": "A", "nt_resnum": 364, "nt_name": "U", "nt_code": "U", "nt_id": "///A/364", "linked_nts": [ "///A/363", "///A/365" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -83.516, "beta": 152.646, "gamma": 34.820, "delta": 79.502, "epsilon": -150.336, "zeta": -72.431, "epsilon_zeta": -77.904, "bb_type": "BI", "chi": -173.011, "glyco_bond": "anti", "C5prime_xyz": [ -1.410, 8.590, 1.287 ], "P_xyz": [ 1.108, 8.701, 1.988 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.438, "theta": -144.250, "eta_prime": 144.132, "theta_prime": -142.101, "eta_base": 152.398, "theta_base": -122.810, "v0": 1.451, "v1": -25.030, "v2": 37.771, "v3": -37.824, "v4": 22.886, "amplitude": 39.374, "phase_angle": 16.407, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.578, "filter_rmsd": 0.110, "frame": { "rmsd": 0.016, "origin": [ 229.194, 296.370, 182.471 ], "x_axis": [ 0.521, -0.074, 0.850 ], "y_axis": [ -0.852, -0.100, 0.514 ], "z_axis": [ 0.046, -0.992, -0.115 ], "quaternion": [ 0.572, 0.659, -0.352, 0.340 ] } }, { "index": 1890, "index_chain": 364, "chain_name": "A", "nt_resnum": 365, "nt_name": "A", "nt_code": "A", "nt_id": "///A/365", "linked_nts": [ "///A/364", "///A/366" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -71.937, "beta": 178.575, "gamma": 63.801, "delta": 79.122, "epsilon": -144.603, "zeta": -47.195, "epsilon_zeta": -97.407, "bb_type": "BI", "chi": -169.748, "glyco_bond": "anti", "C5prime_xyz": [ -1.614, 8.645, 1.065 ], "P_xyz": [ 0.919, 9.189, 1.443 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.498, "theta": -119.217, "eta_prime": -174.942, "theta_prime": -116.838, "eta_base": -142.612, "theta_base": -67.192, "v0": 1.434, "v1": -25.024, "v2": 37.735, "v3": -37.819, "v4": 22.967, "amplitude": 39.349, "phase_angle": 16.467, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.785, "filter_rmsd": 0.042, "frame": { "rmsd": 0.014, "origin": [ 231.422, 292.748, 181.223 ], "x_axis": [ 0.037, -0.053, 0.998 ], "y_axis": [ -0.999, 0.016, 0.037 ], "z_axis": [ -0.018, -0.998, -0.053 ], "quaternion": [ 0.500, 0.518, -0.508, 0.473 ] } }, { "index": 1891, "index_chain": 365, "chain_name": "A", "nt_resnum": 366, "nt_name": "G", "nt_code": "G", "nt_id": "///A/366", "linked_nts": [ "///A/365", "///A/367" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -87.942, "beta": 170.749, "gamma": 74.150, "delta": 78.389, "epsilon": -143.262, "zeta": -67.669, "epsilon_zeta": -75.592, "bb_type": "BI", "chi": -169.862, "glyco_bond": "anti", "C5prime_xyz": [ -1.508, 8.685, 1.082 ], "P_xyz": [ 1.044, 9.254, 0.917 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.625, "theta": -138.180, "eta_prime": -171.298, "theta_prime": -138.636, "eta_base": -93.388, "theta_base": -103.617, "v0": 1.741, "v1": -25.379, "v2": 38.300, "v3": -38.106, "v4": 22.922, "amplitude": 39.853, "phase_angle": 16.049, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.173, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 230.365, 289.311, 185.300 ], "x_axis": [ -0.850, -0.015, 0.526 ], "y_axis": [ -0.526, 0.010, -0.850 ], "z_axis": [ 0.007, -1.000, -0.017 ], "quaternion": [ -0.189, -0.197, 0.685, -0.675 ] } }, { "index": 1892, "index_chain": 366, "chain_name": "A", "nt_resnum": 367, "nt_name": "G", "nt_code": "G", "nt_id": "///A/367", "linked_nts": [ "///A/366", "///A/368" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -67.922, "beta": 168.098, "gamma": 66.538, "delta": 76.396, "epsilon": -124.839, "zeta": -95.637, "epsilon_zeta": -29.202, "bb_type": "--", "chi": -171.599, "glyco_bond": "anti", "C5prime_xyz": [ -1.416, 8.670, 1.178 ], "P_xyz": [ 1.148, 9.192, 1.212 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.602, "theta": -149.119, "eta_prime": -170.757, "theta_prime": -145.359, "eta_base": -117.762, "theta_base": -123.979, "v0": 1.047, "v1": -25.076, "v2": 38.451, "v3": -38.851, "v4": 23.861, "amplitude": 40.247, "phase_angle": 17.181, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.672, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 229.003, 285.803, 187.295 ], "x_axis": [ -0.985, 0.013, -0.171 ], "y_axis": [ 0.171, 0.026, -0.985 ], "z_axis": [ -0.009, -1.000, -0.028 ], "quaternion": [ 0.057, 0.065, 0.714, -0.695 ] } }, { "index": 1893, "index_chain": 367, "chain_name": "A", "nt_resnum": 368, "nt_name": "A", "nt_code": "A", "nt_id": "///A/368", "linked_nts": [ "///A/367", "///A/369" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -40.250, "beta": 163.254, "gamma": 34.802, "delta": 76.788, "epsilon": -148.429, "zeta": -111.797, "epsilon_zeta": -36.632, "bb_type": "BI", "chi": -155.432, "glyco_bond": "anti", "C5prime_xyz": [ -1.326, 8.718, 0.196 ], "P_xyz": [ 1.226, 9.206, 0.305 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.777, "theta": -144.866, "eta_prime": 174.672, "theta_prime": -147.999, "eta_base": -153.922, "theta_base": -135.598, "v0": 2.704, "v1": -26.386, "v2": 38.876, "v3": -38.373, "v4": 22.494, "amplitude": 40.224, "phase_angle": 14.874, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.140, "filter_rmsd": 0.042, "frame": { "rmsd": 0.017, "origin": [ 227.964, 282.190, 188.564 ], "x_axis": [ -0.737, 0.226, -0.638 ], "y_axis": [ 0.636, -0.090, -0.767 ], "z_axis": [ -0.230, -0.970, -0.077 ], "quaternion": [ -0.155, -0.328, -0.656, 0.661 ] } }, { "index": 1894, "index_chain": 368, "chain_name": "A", "nt_resnum": 369, "nt_name": "C", "nt_code": "C", "nt_id": "///A/369", "linked_nts": [ "///A/368", "///A/370" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 150.011, "beta": -132.657, "gamma": 168.909, "delta": 77.259, "epsilon": -128.420, "zeta": -61.703, "epsilon_zeta": -66.716, "bb_type": "BI", "chi": -170.888, "glyco_bond": "anti", "C5prime_xyz": [ -1.141, 8.567, 1.209 ], "P_xyz": [ 0.593, 9.513, -0.470 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.274, "theta": -132.513, "eta_prime": 169.303, "theta_prime": -136.365, "eta_base": -164.688, "theta_base": -104.002, "v0": 5.246, "v1": -29.189, "v2": 41.027, "v3": -38.928, "v4": 21.084, "amplitude": 41.860, "phase_angle": 11.451, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.047, "filter_rmsd": 0.077, "frame": { "rmsd": 0.020, "origin": [ 225.709, 279.311, 189.255 ], "x_axis": [ -0.384, 0.415, -0.825 ], "y_axis": [ 0.787, -0.321, -0.527 ], "z_axis": [ -0.483, -0.852, -0.203 ], "quaternion": [ -0.152, -0.534, -0.563, 0.613 ] } }, { "index": 1895, "index_chain": 369, "chain_name": "A", "nt_resnum": 370, "nt_name": "G", "nt_code": "G", "nt_id": "///A/370", "linked_nts": [ "///A/369", "///A/371" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -71.272, "beta": -174.970, "gamma": 58.211, "delta": 73.666, "epsilon": -153.386, "zeta": -77.364, "epsilon_zeta": -76.022, "bb_type": "BI", "chi": -161.072, "glyco_bond": "anti", "C5prime_xyz": [ -1.528, 8.840, 0.543 ], "P_xyz": [ 0.947, 9.591, 0.760 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.763, "theta": -128.293, "eta_prime": -177.147, "theta_prime": -136.310, "eta_base": -122.073, "theta_base": -120.510, "v0": 0.592, "v1": -26.526, "v2": 41.121, "v3": -41.814, "v4": 25.972, "amplitude": 43.192, "phase_angle": 17.815, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.641, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 222.131, 278.151, 185.832 ], "x_axis": [ 0.420, 0.253, -0.872 ], "y_axis": [ 0.784, -0.584, 0.209 ], "z_axis": [ -0.456, -0.771, -0.444 ], "quaternion": [ 0.313, 0.782, 0.332, -0.424 ] } }, { "index": 1896, "index_chain": 370, "chain_name": "A", "nt_resnum": 371, "nt_name": "G", "nt_code": "G", "nt_id": "///A/371", "linked_nts": [ "///A/370", "///A/372" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 141.286, "beta": -160.386, "gamma": -163.523, "delta": 80.253, "epsilon": -157.060, "zeta": -85.792, "epsilon_zeta": -71.267, "bb_type": "BI", "chi": -165.494, "glyco_bond": "anti", "C5prime_xyz": [ -1.383, 8.674, 0.847 ], "P_xyz": [ -0.414, 10.678, -0.504 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.596, "theta": -161.140, "eta_prime": -176.964, "theta_prime": -159.705, "eta_base": -143.703, "theta_base": -125.739, "v0": 2.587, "v1": -25.318, "v2": 37.384, "v3": -36.799, "v4": 21.572, "amplitude": 38.672, "phase_angle": 14.831, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.433, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 219.717, 278.225, 182.636 ], "x_axis": [ 0.724, 0.073, -0.686 ], "y_axis": [ 0.458, -0.795, 0.398 ], "z_axis": [ -0.517, -0.602, -0.609 ], "quaternion": [ 0.283, 0.884, 0.150, -0.340 ] } }, { "index": 1897, "index_chain": 371, "chain_name": "A", "nt_resnum": 372, "nt_name": "A", "nt_code": "A", "nt_id": "///A/372", "linked_nts": [ "///A/371", "///A/373" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 153.268, "beta": -142.708, "gamma": 174.370, "delta": 78.087, "epsilon": -120.782, "zeta": -82.576, "epsilon_zeta": -38.206, "bb_type": "--", "chi": -177.429, "glyco_bond": "anti", "C5prime_xyz": [ -1.229, 8.334, 1.566 ], "P_xyz": [ 0.532, 9.746, 0.284 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.339, "theta": -152.239, "eta_prime": -176.032, "theta_prime": -151.704, "eta_base": -125.766, "theta_base": -125.650, "v0": 6.118, "v1": -29.105, "v2": 40.102, "v3": -37.567, "v4": 19.769, "amplitude": 40.740, "phase_angle": 10.157, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.617, "filter_rmsd": 0.042, "frame": { "rmsd": 0.019, "origin": [ 218.896, 277.581, 178.545 ], "x_axis": [ 0.811, -0.441, -0.385 ], "y_axis": [ -0.088, -0.743, 0.664 ], "z_axis": [ -0.579, -0.504, -0.641 ], "quaternion": [ 0.327, 0.894, -0.148, -0.270 ] } }, { "index": 1898, "index_chain": 372, "chain_name": "A", "nt_resnum": 373, "nt_name": "G", "nt_code": "G", "nt_id": "///A/373", "linked_nts": [ "///A/372", "///A/374" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -51.752, "beta": 163.147, "gamma": 50.596, "delta": 74.778, "epsilon": -152.069, "zeta": -76.199, "epsilon_zeta": -75.870, "bb_type": "BI", "chi": -160.242, "glyco_bond": "anti", "C5prime_xyz": [ -1.669, 8.835, 0.465 ], "P_xyz": [ 0.802, 9.619, 0.333 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.196, "theta": -122.365, "eta_prime": 178.357, "theta_prime": -129.851, "eta_base": -139.476, "theta_base": -104.881, "v0": -0.425, "v1": -24.790, "v2": 39.230, "v3": -40.582, "v4": 25.788, "amplitude": 41.537, "phase_angle": 19.183, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.478, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 218.872, 276.967, 174.965 ], "x_axis": [ 0.683, -0.723, 0.105 ], "y_axis": [ -0.609, -0.484, 0.629 ], "z_axis": [ -0.404, -0.493, -0.771 ], "quaternion": [ 0.327, 0.857, -0.388, -0.087 ] } }, { "index": 1899, "index_chain": 373, "chain_name": "A", "nt_resnum": 374, "nt_name": "C", "nt_code": "C", "nt_id": "///A/374", "linked_nts": [ "///A/373", "///A/375" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": 128.712, "beta": -149.332, "gamma": -144.602, "delta": 82.180, "epsilon": -140.306, "zeta": 36.040, "epsilon_zeta": 183.655, "bb_type": "--", "chi": -161.088, "glyco_bond": "anti", "C5prime_xyz": [ -1.356, 8.778, 0.604 ], "P_xyz": [ -0.626, 10.825, -0.860 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -173.911, "theta": -43.985, "eta_prime": -160.778, "theta_prime": -84.433, "eta_base": -117.335, "theta_base": -130.047, "v0": -0.222, "v1": -21.675, "v2": 34.117, "v3": -35.238, "v4": 22.320, "amplitude": 36.078, "phase_angle": 18.976, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.068, "frame": { "rmsd": 0.012, "origin": [ 221.239, 274.703, 172.231 ], "x_axis": [ 0.295, -0.911, 0.287 ], "y_axis": [ -0.938, -0.220, 0.268 ], "z_axis": [ -0.181, -0.348, -0.920 ], "quaternion": [ 0.197, 0.780, -0.593, 0.034 ] } }, { "index": 1900, "index_chain": 374, "chain_name": "A", "nt_resnum": 375, "nt_name": "A", "nt_code": "A", "nt_id": "///A/375", "linked_nts": [ "///A/374", "///A/376" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI,non-canonical,multiplet", "alpha": 85.934, "beta": 141.634, "gamma": 68.537, "delta": 82.575, "epsilon": -148.400, "zeta": -50.939, "epsilon_zeta": -97.460, "bb_type": "BI", "chi": 172.171, "glyco_bond": "anti", "C5prime_xyz": [ -1.444, 8.138, 2.077 ], "P_xyz": [ 1.173, 8.213, 1.965 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -33.849, "theta": -92.385, "eta_prime": 29.307, "theta_prime": -101.589, "eta_base": 74.151, "theta_base": -57.229, "v0": 4.318, "v1": -26.298, "v2": 36.926, "v3": -35.420, "v4": 19.653, "amplitude": 37.771, "phase_angle": 12.145, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "5d", "suiteness": 0.205, "filter_rmsd": 0.042, "frame": { "rmsd": 0.015, "origin": [ 218.618, 269.868, 165.507 ], "x_axis": [ 0.246, 0.904, -0.349 ], "y_axis": [ -0.879, 0.360, 0.312 ], "z_axis": [ 0.408, 0.230, 0.884 ], "quaternion": [ 0.789, 0.026, 0.240, 0.565 ] } }, { "index": 1901, "index_chain": 375, "chain_name": "A", "nt_resnum": 376, "nt_name": "C", "nt_code": "C", "nt_id": "///A/376", "linked_nts": [ "///A/375", "///A/377" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,canonical,helix-end", "alpha": -147.874, "beta": -142.310, "gamma": 99.151, "delta": 84.048, "epsilon": -113.895, "zeta": 162.867, "epsilon_zeta": 83.238, "bb_type": "BII", "chi": -159.321, "glyco_bond": "anti", "C5prime_xyz": [ -1.361, 8.797, 0.479 ], "P_xyz": [ 1.262, 8.797, 0.414 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.351, "theta": 112.760, "eta_prime": -173.682, "theta_prime": 97.396, "eta_base": -100.629, "theta_base": 47.736, "v0": -0.756, "v1": -20.577, "v2": 32.781, "v3": -34.130, "v4": 22.009, "amplitude": 34.840, "phase_angle": 19.798, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.064, "frame": { "rmsd": 0.012, "origin": [ 219.635, 274.909, 168.114 ], "x_axis": [ -0.802, 0.586, 0.115 ], "y_axis": [ -0.480, -0.747, 0.459 ], "z_axis": [ 0.355, 0.313, 0.881 ], "quaternion": [ 0.288, 0.127, 0.209, 0.926 ] } }, { "index": 1902, "index_chain": 376, "chain_name": "A", "nt_resnum": 377, "nt_name": "G", "nt_code": "G", "nt_id": "///A/377", "linked_nts": [ "///A/376", "///A/378" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-stack", "alpha": -66.737, "beta": 178.992, "gamma": -76.539, "delta": 146.948, "epsilon": -84.221, "zeta": -104.521, "epsilon_zeta": 20.300, "bb_type": "--", "chi": 48.447, "glyco_bond": "syn", "C5prime_xyz": [ -5.607, 3.994, 0.537 ], "P_xyz": [ -8.093, 3.156, 0.462 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 130.248, "theta": -80.180, "eta_prime": 120.835, "theta_prime": -100.695, "eta_base": 138.165, "theta_base": -6.490, "v0": -26.250, "v1": 39.721, "v2": -37.133, "v3": 22.932, "v4": 1.880, "amplitude": 39.898, "phase_angle": 158.543, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.026, "frame": { "rmsd": 0.026, "origin": [ 215.432, 261.025, 173.003 ], "x_axis": [ -0.237, -0.971, 0.030 ], "y_axis": [ 0.740, -0.161, 0.653 ], "z_axis": [ -0.629, 0.177, 0.757 ], "quaternion": [ 0.583, 0.204, -0.283, -0.734 ] } }, { "index": 1903, "index_chain": 377, "chain_name": "A", "nt_resnum": 378, "nt_name": "A", "nt_code": "A", "nt_id": "///A/378", "linked_nts": [ "///A/377", "///A/379" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,BII", "alpha": -136.220, "beta": -158.181, "gamma": -173.074, "delta": 152.430, "epsilon": -74.914, "zeta": 123.441, "epsilon_zeta": 161.645, "bb_type": "BII", "chi": 42.204, "glyco_bond": "syn", "C5prime_xyz": [ -5.752, 4.740, 0.297 ], "P_xyz": [ -6.916, 2.752, 1.514 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -73.975, "theta": 112.371, "eta_prime": -50.130, "theta_prime": 89.744, "eta_base": -134.469, "theta_base": 50.316, "v0": -30.110, "v1": 44.997, "v2": -41.461, "v3": 25.333, "v4": 2.672, "amplitude": 44.826, "phase_angle": 157.657, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.019, "origin": [ 225.421, 272.523, 178.013 ], "x_axis": [ 0.526, 0.804, -0.279 ], "y_axis": [ 0.753, -0.592, -0.287 ], "z_axis": [ -0.396, -0.059, -0.916 ], "quaternion": [ -0.066, 0.871, 0.447, -0.194 ] } }, { "index": 1904, "index_chain": 378, "chain_name": "A", "nt_resnum": 379, "nt_name": "G", "nt_code": "G", "nt_id": "///A/379", "linked_nts": [ "///A/378", "///A/380" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 35.294, "beta": -150.966, "gamma": -175.710, "delta": 81.469, "epsilon": -103.989, "zeta": -96.982, "epsilon_zeta": -7.007, "bb_type": "--", "chi": -95.585, "glyco_bond": "anti", "C5prime_xyz": [ -2.822, 7.639, -2.738 ], "P_xyz": [ -3.274, 6.915, -5.200 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 131.237, "theta": -160.054, "eta_prime": 103.895, "theta_prime": -173.321, "eta_base": 86.708, "theta_base": 136.584, "v0": -6.141, "v1": -16.793, "v2": 31.942, "v3": -36.345, "v4": 26.883, "amplitude": 36.223, "phase_angle": 28.139, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "6n", "suiteness": 0.067, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 222.975, 269.278, 174.196 ], "x_axis": [ 0.129, 0.891, 0.436 ], "y_axis": [ 0.990, -0.088, -0.115 ], "z_axis": [ -0.064, 0.446, -0.893 ], "quaternion": [ -0.193, 0.726, 0.647, 0.128 ] } }, { "index": 1905, "index_chain": 379, "chain_name": "A", "nt_resnum": 380, "nt_name": "A", "nt_code": "A", "nt_id": "///A/380", "linked_nts": [ "///A/379", "///A/381" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,BI", "alpha": -50.481, "beta": 179.260, "gamma": -63.743, "delta": 82.280, "epsilon": -146.646, "zeta": -57.824, "epsilon_zeta": -88.821, "bb_type": "BI", "chi": 25.922, "glyco_bond": "syn", "C5prime_xyz": [ -5.446, 3.535, -0.191 ], "P_xyz": [ -7.536, 2.246, -1.094 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 69.892, "theta": -143.009, "eta_prime": 72.670, "theta_prime": -122.050, "eta_base": 68.728, "theta_base": -106.077, "v0": 1.854, "v1": -24.374, "v2": 36.195, "v3": -36.110, "v4": 21.622, "amplitude": 37.614, "phase_angle": 15.791, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.013, "origin": [ 227.792, 268.127, 166.490 ], "x_axis": [ -0.534, 0.497, -0.684 ], "y_axis": [ 0.716, 0.696, -0.052 ], "z_axis": [ 0.450, -0.517, -0.728 ], "quaternion": [ 0.330, 0.353, 0.860, -0.166 ] } }, { "index": 1906, "index_chain": 380, "chain_name": "A", "nt_resnum": 381, "nt_name": "A", "nt_code": "A", "nt_id": "///A/381", "linked_nts": [ "///A/380", "///A/382" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII", "alpha": -143.235, "beta": -142.498, "gamma": 123.840, "delta": 146.695, "epsilon": -110.268, "zeta": 146.374, "epsilon_zeta": 103.358, "bb_type": "BII", "chi": -155.698, "glyco_bond": "anti", "C5prime_xyz": [ -1.912, 8.642, 0.746 ], "P_xyz": [ 0.570, 8.602, 1.554 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -175.861, "theta": 153.815, "eta_prime": -130.964, "theta_prime": 134.717, "eta_base": -130.737, "theta_base": 162.191, "v0": -21.981, "v1": 36.474, "v2": -36.213, "v3": 24.448, "v4": -1.819, "amplitude": 37.693, "phase_angle": 163.891, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.009, "origin": [ 224.067, 268.812, 169.668 ], "x_axis": [ 0.466, -0.834, -0.295 ], "y_axis": [ 0.885, 0.430, 0.179 ], "z_axis": [ -0.022, -0.345, 0.938 ], "quaternion": [ 0.842, 0.156, 0.081, -0.510 ] } }, { "index": 1907, "index_chain": 381, "chain_name": "A", "nt_resnum": 382, "nt_name": "A", "nt_code": "A", "nt_id": "///A/382", "linked_nts": [ "///A/381", "///A/383" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -65.287, "beta": 150.629, "gamma": 39.068, "delta": 81.483, "epsilon": -135.620, "zeta": -54.380, "epsilon_zeta": -81.240, "bb_type": "BI", "chi": 175.915, "glyco_bond": "anti", "C5prime_xyz": [ -1.459, 8.320, 1.882 ], "P_xyz": [ 1.007, 8.163, 2.758 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -168.348, "theta": -112.359, "eta_prime": -177.093, "theta_prime": -110.147, "eta_base": -161.641, "theta_base": -62.466, "v0": 2.197, "v1": -24.208, "v2": 35.751, "v3": -35.432, "v4": 20.986, "amplitude": 37.057, "phase_angle": 15.258, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.518, "filter_rmsd": 0.045, "frame": { "rmsd": 0.014, "origin": [ 220.073, 277.469, 169.693 ], "x_axis": [ -0.196, -0.831, 0.521 ], "y_axis": [ 0.979, -0.135, 0.153 ], "z_axis": [ -0.057, 0.540, 0.840 ], "quaternion": [ 0.614, -0.158, -0.235, -0.737 ] } }, { "index": 1908, "index_chain": 382, "chain_name": "A", "nt_resnum": 383, "nt_name": "C", "nt_code": "C", "nt_id": "///A/383", "linked_nts": [ "///A/382", "///A/384" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -78.454, "beta": -176.971, "gamma": 55.052, "delta": 81.505, "epsilon": -145.086, "zeta": -91.074, "epsilon_zeta": -54.012, "bb_type": "BI", "chi": -161.376, "glyco_bond": "anti", "C5prime_xyz": [ -1.302, 8.748, 0.643 ], "P_xyz": [ 1.258, 9.075, 1.073 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.973, "theta": -154.554, "eta_prime": -176.126, "theta_prime": -149.623, "eta_base": -103.063, "theta_base": -126.489, "v0": 2.266, "v1": -24.208, "v2": 35.836, "v3": -35.386, "v4": 20.914, "amplitude": 37.124, "phase_angle": 15.132, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.673, "filter_rmsd": 0.069, "frame": { "rmsd": 0.012, "origin": [ 219.655, 276.453, 174.534 ], "x_axis": [ 0.753, -0.550, 0.361 ], "y_axis": [ 0.657, 0.658, -0.368 ], "z_axis": [ -0.035, 0.514, 0.857 ], "quaternion": [ 0.904, -0.244, -0.110, -0.334 ] } }, { "index": 1909, "index_chain": 383, "chain_name": "A", "nt_resnum": 384, "nt_name": "U", "nt_code": "U", "nt_id": "///A/384", "linked_nts": [ "///A/383", "///A/385" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -42.960, "beta": 157.168, "gamma": 54.653, "delta": 82.473, "epsilon": -150.009, "zeta": -78.886, "epsilon_zeta": -71.123, "bb_type": "BI", "chi": -166.489, "glyco_bond": "anti", "C5prime_xyz": [ -1.359, 8.662, 0.931 ], "P_xyz": [ 1.248, 8.814, 1.081 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -179.785, "theta": -112.238, "eta_prime": -167.420, "theta_prime": -122.947, "eta_base": -136.095, "theta_base": -87.652, "v0": 1.275, "v1": -22.889, "v2": 34.676, "v3": -34.822, "v4": 21.181, "amplitude": 36.186, "phase_angle": 16.612, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.455, "filter_rmsd": 0.108, "frame": { "rmsd": 0.015, "origin": [ 218.960, 277.903, 179.000 ], "x_axis": [ 0.972, -0.225, 0.068 ], "y_axis": [ 0.220, 0.770, -0.599 ], "z_axis": [ 0.082, 0.597, 0.798 ], "quaternion": [ 0.941, -0.318, 0.004, -0.118 ] } }, { "index": 1910, "index_chain": 384, "chain_name": "A", "nt_resnum": 385, "nt_name": "U", "nt_code": "U", "nt_id": "///A/385", "linked_nts": [ "///A/384", "///A/386" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 155.212, "beta": -151.260, "gamma": 167.108, "delta": 80.728, "epsilon": -104.160, "zeta": -122.000, "epsilon_zeta": 17.840, "bb_type": "--", "chi": -169.559, "glyco_bond": "anti", "C5prime_xyz": [ -1.252, 8.597, 1.132 ], "P_xyz": [ 0.651, 9.816, -0.148 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.329, "theta": -165.105, "eta_prime": 179.824, "theta_prime": -151.026, "eta_base": -122.458, "theta_base": -154.144, "v0": 2.233, "v1": -24.209, "v2": 35.985, "v3": -35.618, "v4": 21.052, "amplitude": 37.301, "phase_angle": 15.266, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.643, "filter_rmsd": 0.109, "frame": { "rmsd": 0.013, "origin": [ 221.539, 278.432, 181.813 ], "x_axis": [ 0.855, 0.297, -0.426 ], "y_axis": [ -0.453, 0.828, -0.332 ], "z_axis": [ 0.254, 0.476, 0.842 ], "quaternion": [ 0.939, -0.215, 0.181, 0.200 ] } }, { "index": 1911, "index_chain": 385, "chain_name": "A", "nt_resnum": 386, "nt_name": "U", "nt_code": "U", "nt_id": "///A/386", "linked_nts": [ "///A/385", "///A/387" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -24.271, "beta": 130.936, "gamma": 51.584, "delta": 141.083, "epsilon": -147.205, "zeta": -133.489, "epsilon_zeta": -13.717, "bb_type": "--", "chi": -112.964, "glyco_bond": "anti", "C5prime_xyz": [ -2.868, 8.375, -1.568 ], "P_xyz": [ -0.356, 9.022, -1.787 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.324, "theta": -139.508, "eta_prime": -153.554, "theta_prime": -169.406, "eta_base": -155.709, "theta_base": -134.212, "v0": -28.668, "v1": 40.022, "v2": -35.283, "v3": 19.708, "v4": 5.440, "amplitude": 39.466, "phase_angle": 153.381, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.101, "frame": { "rmsd": 0.012, "origin": [ 222.274, 278.675, 184.505 ], "x_axis": [ 0.572, 0.336, -0.748 ], "y_axis": [ -0.449, 0.892, 0.057 ], "z_axis": [ 0.687, 0.303, 0.661 ], "quaternion": [ 0.884, -0.069, 0.406, 0.222 ] } }, { "index": 1912, "index_chain": 386, "chain_name": "A", "nt_resnum": 387, "nt_name": "G", "nt_code": "G", "nt_id": "///A/387", "linked_nts": [ "///A/386", "///A/388" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -134.555, "beta": -176.376, "gamma": 64.161, "delta": 79.563, "epsilon": -147.751, "zeta": -73.740, "epsilon_zeta": -74.011, "bb_type": "BI", "chi": -166.106, "glyco_bond": "anti", "C5prime_xyz": [ -1.127, 8.605, 0.868 ], "P_xyz": [ 1.482, 8.808, 0.932 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 132.829, "theta": -146.158, "eta_prime": 132.081, "theta_prime": -144.264, "eta_base": -176.189, "theta_base": -131.885, "v0": 5.580, "v1": -28.588, "v2": 39.682, "v3": -37.344, "v4": 20.049, "amplitude": 40.393, "phase_angle": 10.767, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 224.855, 279.651, 188.472 ], "x_axis": [ -0.137, 0.548, -0.825 ], "y_axis": [ -0.891, 0.295, 0.344 ], "z_axis": [ 0.432, 0.782, 0.448 ], "quaternion": [ 0.634, -0.173, 0.496, 0.568 ] } }, { "index": 1913, "index_chain": 387, "chain_name": "A", "nt_resnum": 388, "nt_name": "U", "nt_code": "U", "nt_id": "///A/388", "linked_nts": [ "///A/387", "///A/389" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -69.542, "beta": 177.292, "gamma": 64.578, "delta": 80.303, "epsilon": -144.988, "zeta": -63.121, "epsilon_zeta": -81.867, "bb_type": "BI", "chi": -156.922, "glyco_bond": "anti", "C5prime_xyz": [ -1.654, 8.765, 0.274 ], "P_xyz": [ 0.878, 9.389, 0.155 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.064, "theta": -133.942, "eta_prime": -174.627, "theta_prime": -135.257, "eta_base": -150.600, "theta_base": -101.795, "v0": -0.933, "v1": -22.771, "v2": 36.388, "v3": -37.910, "v4": 24.404, "amplitude": 38.692, "phase_angle": 19.870, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.769, "filter_rmsd": 0.094, "frame": { "rmsd": 0.017, "origin": [ 227.951, 281.587, 188.635 ], "x_axis": [ -0.541, 0.539, -0.645 ], "y_axis": [ -0.675, 0.179, 0.716 ], "z_axis": [ 0.502, 0.823, 0.267 ], "quaternion": [ 0.476, -0.056, 0.603, 0.638 ] } }, { "index": 1914, "index_chain": 388, "chain_name": "A", "nt_resnum": 389, "nt_name": "C", "nt_code": "C", "nt_id": "///A/389", "linked_nts": [ "///A/388", "///A/390" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -92.758, "beta": 170.868, "gamma": 83.455, "delta": 77.143, "epsilon": -144.364, "zeta": -38.297, "epsilon_zeta": -106.068, "bb_type": "BI", "chi": -161.679, "glyco_bond": "anti", "C5prime_xyz": [ -1.567, 8.862, 0.579 ], "P_xyz": [ 0.846, 9.649, 0.014 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.449, "theta": -123.946, "eta_prime": -178.244, "theta_prime": -135.784, "eta_base": -127.129, "theta_base": -117.830, "v0": -1.252, "v1": -23.182, "v2": 37.430, "v3": -39.117, "v4": 25.450, "amplitude": 39.911, "phase_angle": 20.311, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.013, "filter_rmsd": 0.062, "frame": { "rmsd": 0.015, "origin": [ 228.604, 285.665, 187.432 ], "x_axis": [ -0.939, 0.333, -0.089 ], "y_axis": [ -0.130, -0.105, 0.986 ], "z_axis": [ 0.319, 0.937, 0.142 ], "quaternion": [ 0.157, 0.078, 0.650, 0.739 ] } }, { "index": 1915, "index_chain": 389, "chain_name": "A", "nt_resnum": 390, "nt_name": "U", "nt_code": "U", "nt_id": "///A/390", "linked_nts": [ "///A/389", "///A/391" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -138.871, "beta": 128.998, "gamma": 155.345, "delta": 81.846, "epsilon": -152.505, "zeta": -72.075, "epsilon_zeta": -80.430, "bb_type": "BI", "chi": -174.094, "glyco_bond": "anti", "C5prime_xyz": [ -1.348, 8.589, 1.344 ], "P_xyz": [ -0.431, 10.624, -0.022 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.941, "theta": -158.982, "eta_prime": -168.126, "theta_prime": -153.579, "eta_base": -130.569, "theta_base": -89.129, "v0": 0.171, "v1": -22.045, "v2": 34.254, "v3": -35.066, "v4": 22.078, "amplitude": 36.085, "phase_angle": 18.331, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.010, "filter_rmsd": 0.108, "frame": { "rmsd": 0.015, "origin": [ 227.893, 289.491, 185.674 ], "x_axis": [ -0.925, 0.165, 0.342 ], "y_axis": [ 0.324, -0.125, 0.938 ], "z_axis": [ 0.198, 0.978, 0.062 ], "quaternion": [ -0.055, 0.186, 0.659, 0.727 ] } }, { "index": 1916, "index_chain": 390, "chain_name": "A", "nt_resnum": 391, "nt_name": "G", "nt_code": "G", "nt_id": "///A/391", "linked_nts": [ "///A/390", "///A/392" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": 178.500, "beta": -150.361, "gamma": 135.453, "delta": 83.269, "epsilon": -138.505, "zeta": -83.617, "epsilon_zeta": -54.889, "bb_type": "BI", "chi": -163.555, "glyco_bond": "anti", "C5prime_xyz": [ -0.925, 8.578, 0.817 ], "P_xyz": [ 1.405, 8.827, -0.362 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 143.900, "theta": -176.655, "eta_prime": 173.930, "theta_prime": 166.297, "eta_base": -103.009, "theta_base": 149.620, "v0": 6.797, "v1": -27.281, "v2": 36.345, "v3": -33.389, "v4": 16.841, "amplitude": 36.722, "phase_angle": 8.217, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 226.231, 292.649, 187.490 ], "x_axis": [ -0.218, 0.042, 0.975 ], "y_axis": [ 0.976, -0.006, 0.218 ], "z_axis": [ 0.015, 0.999, -0.039 ], "quaternion": [ -0.429, 0.455, 0.559, 0.544 ] } }, { "index": 1917, "index_chain": 391, "chain_name": "A", "nt_resnum": 392, "nt_name": "A", "nt_code": "A", "nt_id": "///A/392", "linked_nts": [ "///A/391", "///A/393" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -114.381, "beta": 92.831, "gamma": 163.831, "delta": 80.123, "epsilon": -128.407, "zeta": -77.951, "epsilon_zeta": -50.456, "bb_type": "BI", "chi": -171.185, "glyco_bond": "anti", "C5prime_xyz": [ -1.178, 8.464, 1.208 ], "P_xyz": [ -1.479, 10.519, -0.386 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -159.108, "theta": 166.190, "eta_prime": 179.642, "theta_prime": -178.606, "eta_base": 158.287, "theta_base": -102.850, "v0": 5.505, "v1": -27.591, "v2": 38.069, "v3": -35.913, "v4": 19.241, "amplitude": 38.738, "phase_angle": 10.662, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.680, "filter_rmsd": 0.039, "frame": { "rmsd": 0.016, "origin": [ 227.727, 296.490, 177.730 ], "x_axis": [ -0.853, 0.300, 0.427 ], "y_axis": [ 0.479, 0.123, 0.869 ], "z_axis": [ 0.208, 0.946, -0.248 ], "quaternion": [ -0.074, 0.261, 0.746, 0.609 ] } }, { "index": 1918, "index_chain": 392, "chain_name": "A", "nt_resnum": 393, "nt_name": "A", "nt_code": "A", "nt_id": "///A/393", "linked_nts": [ "///A/392", "///A/394" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,BI,non-canonical,helix-end", "alpha": -50.478, "beta": -176.524, "gamma": 35.945, "delta": 76.166, "epsilon": -143.657, "zeta": -51.573, "epsilon_zeta": -92.084, "bb_type": "BI", "chi": 33.787, "glyco_bond": "syn", "C5prime_xyz": [ -5.730, 3.901, 0.204 ], "P_xyz": [ -6.453, 1.416, -0.143 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.311, "theta": -132.291, "eta_prime": 176.966, "theta_prime": -116.873, "eta_base": -106.182, "theta_base": -125.527, "v0": -5.334, "v1": -19.527, "v2": 35.364, "v3": -39.486, "v4": 28.247, "amplitude": 39.412, "phase_angle": 26.193, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.376, "filter_rmsd": 0.043, "frame": { "rmsd": 0.024, "origin": [ 227.808, 300.420, 179.809 ], "x_axis": [ -0.897, -0.073, -0.435 ], "y_axis": [ 0.440, -0.072, -0.895 ], "z_axis": [ 0.034, -0.995, 0.096 ], "quaternion": [ -0.178, -0.140, -0.657, 0.719 ] } }, { "index": 1919, "index_chain": 393, "chain_name": "A", "nt_resnum": 394, "nt_name": "C", "nt_code": "C", "nt_id": "///A/394", "linked_nts": [ "///A/393", "///A/395" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -84.449, "beta": 165.075, "gamma": 106.033, "delta": 145.967, "epsilon": -144.451, "zeta": 178.814, "epsilon_zeta": 36.735, "bb_type": "--", "chi": -135.553, "glyco_bond": "anti", "C5prime_xyz": [ -1.699, 8.753, -0.399 ], "P_xyz": [ 0.855, 9.094, -0.897 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -170.748, "theta": 154.291, "eta_prime": -118.816, "theta_prime": 123.395, "eta_base": -125.462, "theta_base": 141.257, "v0": -21.975, "v1": 35.841, "v2": -35.285, "v3": 23.461, "v4": -1.096, "amplitude": 36.903, "phase_angle": 162.972, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.065, "frame": { "rmsd": 0.007, "origin": [ 225.624, 303.479, 180.424 ], "x_axis": [ 0.423, -0.187, 0.887 ], "y_axis": [ 0.898, 0.219, -0.382 ], "z_axis": [ -0.123, 0.958, 0.260 ], "quaternion": [ 0.689, -0.486, -0.366, -0.393 ] } }, { "index": 1920, "index_chain": 394, "chain_name": "A", "nt_resnum": 395, "nt_name": "A", "nt_code": "A", "nt_id": "///A/395", "linked_nts": [ "///A/394", "///A/396" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,BII", "alpha": 4.331, "beta": -125.451, "gamma": -33.551, "delta": 144.958, "epsilon": -98.401, "zeta": 151.440, "epsilon_zeta": 110.159, "bb_type": "BII", "chi": 27.943, "glyco_bond": "--", "C5prime_xyz": [ -5.663, 4.325, -0.472 ], "P_xyz": [ -8.072, 4.717, -1.492 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -103.185, "theta": 141.397, "eta_prime": -127.831, "theta_prime": 155.709, "eta_base": -148.660, "theta_base": 2.228, "v0": -26.313, "v1": 39.215, "v2": -36.381, "v3": 22.178, "v4": 2.358, "amplitude": 39.296, "phase_angle": 157.794, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.039, "frame": { "rmsd": 0.012, "origin": [ 221.514, 303.895, 170.432 ], "x_axis": [ -0.646, -0.253, -0.720 ], "y_axis": [ 0.713, 0.136, -0.688 ], "z_axis": [ 0.272, -0.958, 0.093 ], "quaternion": [ 0.382, 0.177, 0.650, -0.633 ] } }, { "index": 1921, "index_chain": 395, "chain_name": "A", "nt_resnum": 396, "nt_name": "U", "nt_code": "U", "nt_id": "///A/396", "linked_nts": [ "///A/395", "///A/397" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": 71.226, "beta": 126.822, "gamma": 49.737, "delta": 83.569, "epsilon": -148.131, "zeta": 83.369, "epsilon_zeta": 128.500, "bb_type": "--", "chi": -152.328, "glyco_bond": "anti", "C5prime_xyz": [ -1.483, 8.733, 0.077 ], "P_xyz": [ 1.035, 8.390, -0.574 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -48.920, "theta": 12.073, "eta_prime": -53.866, "theta_prime": -11.245, "eta_base": 115.340, "theta_base": 10.080, "v0": 2.113, "v1": -23.464, "v2": 34.607, "v3": -34.346, "v4": 20.327, "amplitude": 35.875, "phase_angle": 15.279, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.111, "frame": { "rmsd": 0.009, "origin": [ 238.718, 310.434, 169.325 ], "x_axis": [ -0.395, 0.304, 0.867 ], "y_axis": [ -0.843, -0.495, -0.210 ], "z_axis": [ 0.365, -0.814, 0.452 ], "quaternion": [ 0.375, 0.403, -0.335, 0.765 ] } }, { "index": 1922, "index_chain": 396, "chain_name": "A", "nt_resnum": 397, "nt_name": "G", "nt_code": "G", "nt_id": "///A/397", "linked_nts": [ "///A/396", "///A/398" ], "nt_type": "RNA", "dbn": ".", "summary": "syn,non-canonical,helix-end", "alpha": 177.651, "beta": 133.590, "gamma": 150.604, "delta": 80.024, "epsilon": -105.023, "zeta": -35.162, "epsilon_zeta": -69.861, "bb_type": "--", "chi": -19.106, "glyco_bond": "syn", "C5prime_xyz": [ -4.784, 4.417, -2.449 ], "P_xyz": [ -6.822, 2.840, -2.013 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.758, "theta": -128.761, "eta_prime": -157.793, "theta_prime": -127.369, "eta_base": -120.213, "theta_base": -138.758, "v0": 2.800, "v1": -25.003, "v2": 36.623, "v3": -36.013, "v4": 20.980, "amplitude": 37.831, "phase_angle": 14.519, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 227.379, 301.778, 165.652 ], "x_axis": [ -0.917, -0.370, 0.149 ], "y_axis": [ 0.164, -0.011, 0.986 ], "z_axis": [ -0.364, 0.929, 0.071 ], "quaternion": [ -0.189, -0.076, 0.677, 0.707 ] } }, { "index": 1923, "index_chain": 397, "chain_name": "A", "nt_resnum": 398, "nt_name": "G", "nt_code": "G", "nt_id": "///A/398", "linked_nts": [ "///A/397", "///A/399" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -120.138, "beta": 122.891, "gamma": 137.660, "delta": 82.800, "epsilon": -111.004, "zeta": -116.197, "epsilon_zeta": 5.193, "bb_type": "--", "chi": 172.483, "glyco_bond": "anti", "C5prime_xyz": [ -1.223, 8.155, 2.124 ], "P_xyz": [ 0.261, 10.011, 1.088 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.149, "theta": -163.959, "eta_prime": -171.028, "theta_prime": -148.743, "eta_base": -160.905, "theta_base": -142.790, "v0": 4.143, "v1": -25.396, "v2": 36.021, "v3": -34.597, "v4": 19.218, "amplitude": 36.875, "phase_angle": 12.352, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 225.411, 297.350, 165.417 ], "x_axis": [ 0.625, 0.177, -0.760 ], "y_axis": [ 0.727, 0.222, 0.650 ], "z_axis": [ 0.284, -0.959, 0.010 ], "quaternion": [ 0.681, 0.590, 0.383, -0.202 ] } }, { "index": 1924, "index_chain": 398, "chain_name": "A", "nt_resnum": 399, "nt_name": "G", "nt_code": "G", "nt_id": "///A/399", "linked_nts": [ "///A/398", "///A/400" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 14.779, "beta": 140.662, "gamma": 4.716, "delta": 147.526, "epsilon": -157.706, "zeta": -136.821, "epsilon_zeta": -20.885, "bb_type": "--", "chi": -120.795, "glyco_bond": "anti", "C5prime_xyz": [ -2.199, 8.613, -1.118 ], "P_xyz": [ -0.172, 9.798, 0.075 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.666, "theta": -122.414, "eta_prime": -166.450, "theta_prime": -151.144, "eta_base": -154.223, "theta_base": -108.938, "v0": -25.315, "v1": 39.666, "v2": -37.777, "v3": 24.027, "v4": 0.665, "amplitude": 40.124, "phase_angle": 160.304, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 224.565, 294.233, 163.836 ], "x_axis": [ 0.668, 0.660, -0.345 ], "y_axis": [ 0.488, -0.039, 0.872 ], "z_axis": [ 0.562, -0.751, -0.348 ], "quaternion": [ 0.566, 0.717, 0.400, 0.076 ] } }, { "index": 1925, "index_chain": 399, "chain_name": "A", "nt_resnum": 400, "nt_name": "G", "nt_code": "G", "nt_id": "///A/400", "linked_nts": [ "///A/399", "///A/401" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem,multiplet", "alpha": 102.506, "beta": -145.908, "gamma": -158.879, "delta": 79.586, "epsilon": -119.630, "zeta": -93.478, "epsilon_zeta": -26.152, "bb_type": "--", "chi": -171.032, "glyco_bond": "anti", "C5prime_xyz": [ -1.225, 8.569, 1.224 ], "P_xyz": [ -0.080, 10.503, -0.074 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.510, "theta": -173.753, "eta_prime": 161.658, "theta_prime": -163.874, "eta_base": -137.500, "theta_base": -124.127, "v0": 3.936, "v1": -26.560, "v2": 37.976, "v3": -36.711, "v4": 20.639, "amplitude": 38.965, "phase_angle": 12.939, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "4n", "suiteness": 0.233, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 226.942, 291.540, 161.222 ], "x_axis": [ 0.935, 0.297, 0.191 ], "y_axis": [ -0.103, -0.288, 0.952 ], "z_axis": [ 0.338, -0.910, -0.239 ], "quaternion": [ 0.593, 0.785, 0.062, 0.169 ] } }, { "index": 1926, "index_chain": 400, "chain_name": "A", "nt_resnum": 401, "nt_name": "G", "nt_code": "G", "nt_id": "///A/401", "linked_nts": [ "///A/400", "///A/402" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -45.172, "beta": 155.236, "gamma": 48.940, "delta": 79.861, "epsilon": -142.539, "zeta": 64.327, "epsilon_zeta": 153.133, "bb_type": "--", "chi": -146.592, "glyco_bond": "anti", "C5prime_xyz": [ -1.188, 8.834, -0.275 ], "P_xyz": [ 1.378, 8.997, -0.685 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.168, "theta": 28.658, "eta_prime": -176.309, "theta_prime": 25.900, "eta_base": -131.358, "theta_base": 17.542, "v0": -0.292, "v1": -22.106, "v2": 34.870, "v3": -36.006, "v4": 22.952, "amplitude": 36.899, "phase_angle": 19.091, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.296, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 229.400, 289.671, 160.121 ], "x_axis": [ 0.657, 0.116, 0.745 ], "y_axis": [ -0.518, -0.649, 0.557 ], "z_axis": [ 0.548, -0.752, -0.367 ], "quaternion": [ 0.400, 0.817, -0.123, 0.395 ] } }, { "index": 1927, "index_chain": 401, "chain_name": "A", "nt_resnum": 402, "nt_name": "G", "nt_code": "G", "nt_id": "///A/402", "linked_nts": [ "///A/401", "///A/403" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,canonical,helix-end", "alpha": 75.912, "beta": 123.011, "gamma": -58.385, "delta": 158.764, "epsilon": -97.983, "zeta": 162.482, "epsilon_zeta": 99.535, "bb_type": "BII", "chi": -122.867, "glyco_bond": "anti", "C5prime_xyz": [ -1.195, 8.364, -0.837 ], "P_xyz": [ -0.387, 10.236, 0.793 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -145.550, "theta": 155.424, "eta_prime": -120.818, "theta_prime": 162.615, "eta_base": -109.127, "theta_base": -178.057, "v0": -11.591, "v1": 30.944, "v2": -37.347, "v3": 31.580, "v4": -12.778, "amplitude": 37.352, "phase_angle": 180.909, "puckering": "C3'-exo", "sugar_class": "--", "bin": "32m", "cluster": "5r", "suiteness": 0.544, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 219.941, 274.728, 167.299 ], "x_axis": [ -0.838, 0.437, -0.327 ], "y_axis": [ 0.546, 0.682, -0.487 ], "z_axis": [ 0.010, -0.586, -0.810 ], "quaternion": [ 0.092, 0.269, 0.912, -0.294 ] } }, { "index": 1928, "index_chain": 402, "chain_name": "A", "nt_resnum": 403, "nt_name": "A", "nt_code": "A", "nt_id": "///A/403", "linked_nts": [ "///A/402", "///A/404" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -76.796, "beta": -175.275, "gamma": 116.127, "delta": 78.799, "epsilon": -117.504, "zeta": -44.169, "epsilon_zeta": -73.334, "bb_type": "--", "chi": -173.130, "glyco_bond": "anti", "C5prime_xyz": [ -1.306, 8.501, 1.274 ], "P_xyz": [ 0.982, 9.395, 0.420 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -75.111, "theta": -102.093, "eta_prime": -92.069, "theta_prime": -100.316, "eta_base": -89.347, "theta_base": -50.422, "v0": 3.647, "v1": -27.431, "v2": 39.455, "v3": -38.460, "v4": 21.909, "amplitude": 40.587, "phase_angle": 13.562, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.040, "frame": { "rmsd": 0.011, "origin": [ 238.272, 275.325, 166.377 ], "x_axis": [ 0.151, 0.254, -0.955 ], "y_axis": [ -0.976, 0.195, -0.102 ], "z_axis": [ 0.160, 0.948, 0.277 ], "quaternion": [ 0.637, -0.412, 0.438, 0.483 ] } }, { "index": 1929, "index_chain": 403, "chain_name": "A", "nt_resnum": 404, "nt_name": "C", "nt_code": "C", "nt_id": "///A/404", "linked_nts": [ "///A/403", "///A/405" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -85.054, "beta": 173.760, "gamma": 67.748, "delta": 77.341, "epsilon": -130.514, "zeta": -90.468, "epsilon_zeta": -40.046, "bb_type": "--", "chi": -161.685, "glyco_bond": "anti", "C5prime_xyz": [ -1.484, 8.821, 0.599 ], "P_xyz": [ 1.054, 9.393, 0.442 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 151.247, "theta": -152.055, "eta_prime": -173.251, "theta_prime": -150.347, "eta_base": -93.664, "theta_base": -131.360, "v0": 0.495, "v1": -24.667, "v2": 38.180, "v3": -38.835, "v4": 24.190, "amplitude": 40.113, "phase_angle": 17.860, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.176, "filter_rmsd": 0.065, "frame": { "rmsd": 0.011, "origin": [ 235.863, 279.000, 160.892 ], "x_axis": [ -0.948, 0.011, -0.319 ], "y_axis": [ -0.316, 0.109, 0.943 ], "z_axis": [ 0.046, 0.994, -0.100 ], "quaternion": [ 0.124, -0.104, 0.734, 0.659 ] } }, { "index": 1930, "index_chain": 404, "chain_name": "A", "nt_resnum": 405, "nt_name": "C", "nt_code": "C", "nt_id": "///A/405", "linked_nts": [ "///A/404", "///A/406" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -63.398, "beta": 149.041, "gamma": 69.627, "delta": 79.154, "epsilon": -126.125, "zeta": -136.977, "epsilon_zeta": 10.852, "bb_type": "--", "chi": -155.049, "glyco_bond": "anti", "C5prime_xyz": [ -1.548, 8.877, 0.207 ], "P_xyz": [ 0.848, 9.291, -0.707 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.728, "theta": -147.447, "eta_prime": -177.831, "theta_prime": -153.348, "eta_base": -149.801, "theta_base": -133.698, "v0": -1.998, "v1": -21.909, "v2": 36.168, "v3": -38.308, "v4": 25.435, "amplitude": 38.871, "phase_angle": 21.493, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.350, "filter_rmsd": 0.066, "frame": { "rmsd": 0.015, "origin": [ 235.892, 281.852, 159.295 ], "x_axis": [ -0.993, -0.019, 0.120 ], "y_axis": [ 0.108, 0.321, 0.941 ], "z_axis": [ -0.056, 0.947, -0.317 ], "quaternion": [ -0.054, 0.027, 0.811, 0.582 ] } }, { "index": 1931, "index_chain": 405, "chain_name": "A", "nt_resnum": 406, "nt_name": "A", "nt_code": "A", "nt_id": "///A/406", "linked_nts": [ "///A/405", "///A/407" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 119.191, "beta": -107.677, "gamma": 176.099, "delta": 84.866, "epsilon": -125.310, "zeta": -92.175, "epsilon_zeta": -33.135, "bb_type": "--", "chi": -177.814, "glyco_bond": "anti", "C5prime_xyz": [ -1.164, 8.331, 1.609 ], "P_xyz": [ 0.592, 9.077, -0.171 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.524, "theta": -117.449, "eta_prime": 177.433, "theta_prime": -133.589, "eta_base": -148.303, "theta_base": -102.353, "v0": 4.105, "v1": -24.110, "v2": 33.857, "v3": -32.457, "v4": 17.876, "amplitude": 34.612, "phase_angle": 11.984, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.044, "frame": { "rmsd": 0.018, "origin": [ 234.956, 285.448, 157.731 ], "x_axis": [ -0.826, -0.106, 0.553 ], "y_axis": [ 0.490, 0.348, 0.799 ], "z_axis": [ -0.277, 0.932, -0.235 ], "quaternion": [ -0.268, 0.124, 0.776, 0.558 ] } }, { "index": 1932, "index_chain": 406, "chain_name": "A", "nt_resnum": 407, "nt_name": "U", "nt_code": "U", "nt_id": "///A/407", "linked_nts": [ "///A/406", "///A/408" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": 150.883, "beta": -145.441, "gamma": 168.523, "delta": 82.829, "epsilon": -149.094, "zeta": -73.025, "epsilon_zeta": -76.068, "bb_type": "BI", "chi": -168.529, "glyco_bond": "anti", "C5prime_xyz": [ -1.251, 8.581, 1.061 ], "P_xyz": [ 0.546, 9.695, -0.498 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 144.801, "theta": -130.669, "eta_prime": 175.575, "theta_prime": -142.244, "eta_base": -124.161, "theta_base": -101.784, "v0": 3.787, "v1": -25.418, "v2": 36.140, "v3": -34.904, "v4": 19.630, "amplitude": 37.065, "phase_angle": 12.829, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.169, "filter_rmsd": 0.109, "frame": { "rmsd": 0.012, "origin": [ 231.465, 287.806, 157.980 ], "x_axis": [ -0.232, 0.069, 0.970 ], "y_axis": [ 0.837, 0.522, 0.163 ], "z_axis": [ -0.496, 0.850, -0.179 ], "quaternion": [ 0.527, -0.326, -0.695, -0.364 ] } }, { "index": 1933, "index_chain": 407, "chain_name": "A", "nt_resnum": 408, "nt_name": "C", "nt_code": "C", "nt_id": "///A/408", "linked_nts": [ "///A/407", "///A/409" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": 178.236, "beta": -160.561, "gamma": 145.624, "delta": 81.263, "epsilon": -144.566, "zeta": -74.418, "epsilon_zeta": -70.149, "bb_type": "BI", "chi": -165.889, "glyco_bond": "anti", "C5prime_xyz": [ -1.142, 8.650, 0.902 ], "P_xyz": [ 0.916, 9.509, -0.484 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 146.485, "theta": -152.245, "eta_prime": 173.258, "theta_prime": -154.662, "eta_base": -121.398, "theta_base": -126.831, "v0": 4.300, "v1": -26.364, "v2": 37.217, "v3": -35.643, "v4": 19.795, "amplitude": 38.078, "phase_angle": 12.204, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.072, "frame": { "rmsd": 0.015, "origin": [ 229.082, 289.798, 159.972 ], "x_axis": [ 0.464, 0.353, 0.813 ], "y_axis": [ 0.601, 0.548, -0.581 ], "z_axis": [ -0.651, 0.758, 0.042 ], "quaternion": [ 0.717, -0.467, -0.511, -0.087 ] } }, { "index": 1934, "index_chain": 408, "chain_name": "A", "nt_resnum": 409, "nt_name": "C", "nt_code": "C", "nt_id": "///A/409", "linked_nts": [ "///A/408", "///A/410" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem,multiplet", "alpha": -65.555, "beta": 165.271, "gamma": 64.423, "delta": 80.546, "epsilon": -142.084, "zeta": -71.839, "epsilon_zeta": -70.245, "bb_type": "BI", "chi": -163.931, "glyco_bond": "anti", "C5prime_xyz": [ -1.331, 8.762, 0.761 ], "P_xyz": [ 1.269, 9.075, 0.624 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.864, "theta": -137.602, "eta_prime": -173.126, "theta_prime": -137.335, "eta_base": -129.003, "theta_base": -105.811, "v0": 2.078, "v1": -24.923, "v2": 37.050, "v3": -36.706, "v4": 21.863, "amplitude": 38.443, "phase_angle": 15.474, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.770, "filter_rmsd": 0.070, "frame": { "rmsd": 0.015, "origin": [ 226.829, 292.034, 161.816 ], "x_axis": [ 0.744, 0.575, 0.339 ], "y_axis": [ 0.180, 0.317, -0.931 ], "z_axis": [ -0.643, 0.754, 0.132 ], "quaternion": [ 0.741, -0.569, -0.332, 0.133 ] } }, { "index": 1935, "index_chain": 409, "chain_name": "A", "nt_resnum": 410, "nt_name": "U", "nt_code": "U", "nt_id": "///A/410", "linked_nts": [ "///A/409", "///A/411" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -66.275, "beta": 167.885, "gamma": 60.662, "delta": 81.914, "epsilon": -169.056, "zeta": -93.553, "epsilon_zeta": -75.503, "bb_type": "BI", "chi": -161.010, "glyco_bond": "anti", "C5prime_xyz": [ -1.621, 8.758, 0.572 ], "P_xyz": [ 0.943, 9.258, 0.603 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.515, "theta": -141.550, "eta_prime": -174.419, "theta_prime": -149.747, "eta_base": -123.186, "theta_base": -129.115, "v0": -1.094, "v1": -21.218, "v2": 34.131, "v3": -35.686, "v4": 23.172, "amplitude": 36.377, "phase_angle": 20.241, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.890, "filter_rmsd": 0.105, "frame": { "rmsd": 0.013, "origin": [ 225.928, 295.229, 163.555 ], "x_axis": [ 0.788, 0.532, -0.310 ], "y_axis": [ -0.353, -0.022, -0.935 ], "z_axis": [ -0.504, 0.847, 0.170 ], "quaternion": [ 0.696, -0.640, -0.070, 0.318 ] } }, { "index": 1936, "index_chain": 410, "chain_name": "A", "nt_resnum": 411, "nt_name": "C", "nt_code": "C", "nt_id": "///A/411", "linked_nts": [ "///A/410", "///A/412" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": 166.860, "beta": -143.205, "gamma": 156.041, "delta": 83.667, "epsilon": -150.461, "zeta": -71.976, "epsilon_zeta": -78.485, "bb_type": "BI", "chi": -159.926, "glyco_bond": "anti", "C5prime_xyz": [ -1.215, 8.701, 0.559 ], "P_xyz": [ 0.698, 9.273, -1.134 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.136, "theta": -150.470, "eta_prime": 175.464, "theta_prime": -149.219, "eta_base": -144.714, "theta_base": -145.114, "v0": 4.640, "v1": -25.992, "v2": 36.267, "v3": -34.462, "v4": 18.851, "amplitude": 37.008, "phase_angle": 11.486, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.140, "filter_rmsd": 0.071, "frame": { "rmsd": 0.014, "origin": [ 225.539, 297.444, 165.144 ], "x_axis": [ 0.446, 0.589, -0.674 ], "y_axis": [ -0.830, -0.010, -0.558 ], "z_axis": [ -0.336, 0.808, 0.484 ], "quaternion": [ 0.693, -0.493, 0.122, 0.512 ] } }, { "index": 1937, "index_chain": 411, "chain_name": "A", "nt_resnum": 412, "nt_name": "C", "nt_code": "C", "nt_id": "///A/412", "linked_nts": [ "///A/411", "///A/413" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,helix-end", "alpha": -81.353, "beta": -167.860, "gamma": 78.418, "delta": 147.687, "epsilon": -89.177, "zeta": 131.709, "epsilon_zeta": 139.114, "bb_type": "BII", "chi": -121.477, "glyco_bond": "anti", "C5prime_xyz": [ -2.116, 8.580, -1.171 ], "P_xyz": [ 0.342, 9.392, -0.764 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -153.845, "theta": 138.289, "eta_prime": -132.347, "theta_prime": 128.558, "eta_base": -129.054, "theta_base": 157.216, "v0": -24.368, "v1": 38.282, "v2": -36.689, "v3": 23.596, "v4": 0.262, "amplitude": 38.850, "phase_angle": 160.803, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.264, "filter_rmsd": 0.065, "frame": { "rmsd": 0.014, "origin": [ 225.844, 300.539, 167.496 ], "x_axis": [ 0.189, 0.150, -0.970 ], "y_axis": [ -0.978, -0.062, -0.200 ], "z_axis": [ -0.090, 0.987, 0.135 ], "quaternion": [ 0.562, -0.528, 0.392, 0.502 ] } }, { "index": 1938, "index_chain": 412, "chain_name": "A", "nt_resnum": 413, "nt_name": "A", "nt_code": "A", "nt_id": "///A/413", "linked_nts": [ "///A/412", "///A/414" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -79.636, "beta": -163.822, "gamma": 14.974, "delta": 83.563, "epsilon": -162.914, "zeta": -90.551, "epsilon_zeta": -72.363, "bb_type": "BI", "chi": -154.087, "glyco_bond": "anti", "C5prime_xyz": [ -1.115, 8.578, 0.269 ], "P_xyz": [ 0.919, 9.393, 1.698 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -169.493, "theta": -145.952, "eta_prime": 174.129, "theta_prime": -141.063, "eta_base": -172.984, "theta_base": -97.620, "v0": 5.877, "v1": -26.219, "v2": 35.574, "v3": -33.252, "v4": 17.275, "amplitude": 36.075, "phase_angle": 9.555, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.038, "frame": { "rmsd": 0.016, "origin": [ 224.617, 297.748, 177.315 ], "x_axis": [ 0.381, 0.833, -0.402 ], "y_axis": [ -0.758, 0.033, -0.651 ], "z_axis": [ -0.529, 0.553, 0.644 ], "quaternion": [ 0.717, -0.420, -0.044, 0.555 ] } }, { "index": 1939, "index_chain": 413, "chain_name": "A", "nt_resnum": 414, "nt_name": "A", "nt_code": "A", "nt_id": "///A/414", "linked_nts": [ "///A/413", "///A/415" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": 172.046, "beta": -138.087, "gamma": 146.079, "delta": 81.628, "epsilon": -138.777, "zeta": 72.562, "epsilon_zeta": 148.661, "bb_type": "--", "chi": -159.125, "glyco_bond": "anti", "C5prime_xyz": [ -0.927, 8.583, 0.535 ], "P_xyz": [ 1.171, 8.698, -1.016 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.075, "theta": 38.727, "eta_prime": 175.782, "theta_prime": -9.555, "eta_base": -130.144, "theta_base": -41.648, "v0": 6.144, "v1": -26.975, "v2": 36.561, "v3": -33.984, "v4": 17.591, "amplitude": 37.050, "phase_angle": 9.315, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.014, "origin": [ 223.832, 300.496, 178.789 ], "x_axis": [ -0.151, 0.684, -0.714 ], "y_axis": [ -0.946, -0.309, -0.096 ], "z_axis": [ -0.286, 0.661, 0.694 ], "quaternion": [ 0.555, -0.341, 0.192, 0.734 ] } }, { "index": 1940, "index_chain": 414, "chain_name": "A", "nt_resnum": 415, "nt_name": "G", "nt_code": "G", "nt_id": "///A/415", "linked_nts": [ "///A/414", "///A/416" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 58.651, "beta": 125.829, "gamma": 177.539, "delta": 79.207, "epsilon": -156.268, "zeta": -85.149, "epsilon_zeta": -71.119, "bb_type": "BI", "chi": -161.075, "glyco_bond": "anti", "C5prime_xyz": [ -1.084, 8.724, 0.576 ], "P_xyz": [ -1.093, 11.021, -0.681 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 67.615, "theta": 175.179, "eta_prime": 94.647, "theta_prime": -179.138, "eta_base": 150.719, "theta_base": -162.690, "v0": 2.825, "v1": -25.474, "v2": 37.375, "v3": -36.652, "v4": 21.356, "amplitude": 38.601, "phase_angle": 14.481, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "5j", "suiteness": 0.764, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 209.341, 303.689, 174.806 ], "x_axis": [ 0.498, -0.414, -0.762 ], "y_axis": [ 0.604, -0.465, 0.647 ], "z_axis": [ -0.622, -0.783, 0.018 ], "quaternion": [ 0.513, 0.697, 0.068, -0.496 ] } }, { "index": 1941, "index_chain": 415, "chain_name": "A", "nt_resnum": 416, "nt_name": "G", "nt_code": "G", "nt_id": "///A/416", "linked_nts": [ "///A/415", "///A/417" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": 129.684, "beta": -152.496, "gamma": -158.384, "delta": 82.503, "epsilon": -138.383, "zeta": -76.501, "epsilon_zeta": -61.882, "bb_type": "BI", "chi": -178.994, "glyco_bond": "anti", "C5prime_xyz": [ -1.010, 8.245, 1.647 ], "P_xyz": [ 0.314, 10.316, 0.769 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 170.841, "theta": -175.047, "eta_prime": -178.172, "theta_prime": -165.614, "eta_base": -149.965, "theta_base": -141.058, "v0": 9.310, "v1": -30.358, "v2": 38.871, "v3": -34.510, "v4": 15.897, "amplitude": 39.027, "phase_angle": 5.130, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.158, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 205.923, 302.240, 172.766 ], "x_axis": [ 0.671, -0.535, -0.513 ], "y_axis": [ 0.383, -0.342, 0.858 ], "z_axis": [ -0.635, -0.772, -0.024 ], "quaternion": [ 0.571, 0.714, -0.053, -0.402 ] } }, { "index": 1942, "index_chain": 416, "chain_name": "A", "nt_resnum": 417, "nt_name": "C", "nt_code": "C", "nt_id": "///A/417", "linked_nts": [ "///A/416", "///A/418" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -60.741, "beta": 178.274, "gamma": 56.758, "delta": 79.421, "epsilon": -157.156, "zeta": -81.717, "epsilon_zeta": -75.438, "bb_type": "BI", "chi": -161.763, "glyco_bond": "anti", "C5prime_xyz": [ -1.366, 8.753, 0.646 ], "P_xyz": [ 1.190, 9.170, 0.878 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.049, "theta": -127.429, "eta_prime": -172.421, "theta_prime": -133.901, "eta_base": -141.711, "theta_base": -104.785, "v0": 2.359, "v1": -25.553, "v2": 37.850, "v3": -37.425, "v4": 22.097, "amplitude": 39.219, "phase_angle": 15.182, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.916, "filter_rmsd": 0.067, "frame": { "rmsd": 0.012, "origin": [ 203.173, 300.065, 170.331 ], "x_axis": [ 0.768, -0.640, -0.015 ], "y_axis": [ -0.029, -0.059, 0.998 ], "z_axis": [ -0.639, -0.766, -0.064 ], "quaternion": [ 0.641, 0.688, -0.243, -0.238 ] } }, { "index": 1943, "index_chain": 417, "chain_name": "A", "nt_resnum": 418, "nt_name": "U", "nt_code": "U", "nt_id": "///A/418", "linked_nts": [ "///A/417", "///A/419" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": 159.297, "beta": -151.852, "gamma": 170.774, "delta": 81.934, "epsilon": -112.816, "zeta": -149.320, "epsilon_zeta": 36.503, "bb_type": "--", "chi": -171.764, "glyco_bond": "anti", "C5prime_xyz": [ -1.190, 8.487, 1.281 ], "P_xyz": [ 0.639, 9.807, -0.033 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.376, "theta": 136.475, "eta_prime": -177.220, "theta_prime": 152.088, "eta_base": -129.470, "theta_base": 157.583, "v0": 5.163, "v1": -26.486, "v2": 36.699, "v3": -34.614, "v4": 18.595, "amplitude": 37.362, "phase_angle": 10.807, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.748, "filter_rmsd": 0.111, "frame": { "rmsd": 0.015, "origin": [ 202.970, 296.631, 168.715 ], "x_axis": [ 0.643, -0.525, 0.557 ], "y_axis": [ -0.558, 0.177, 0.811 ], "z_axis": [ -0.524, -0.832, -0.179 ], "quaternion": [ 0.641, 0.641, -0.422, 0.013 ] } }, { "index": 1944, "index_chain": 418, "chain_name": "A", "nt_resnum": 419, "nt_name": "A", "nt_code": "A", "nt_id": "///A/419", "linked_nts": [ "///A/418", "///A/420" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -75.577, "beta": 147.308, "gamma": 67.038, "delta": 84.810, "epsilon": -145.912, "zeta": -58.077, "epsilon_zeta": -87.835, "bb_type": "BI", "chi": -160.131, "glyco_bond": "anti", "C5prime_xyz": [ -1.472, 8.720, 0.527 ], "P_xyz": [ 1.059, 8.960, -0.094 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -175.549, "theta": -122.476, "eta_prime": 175.344, "theta_prime": -126.865, "eta_base": 159.569, "theta_base": -80.617, "v0": 0.331, "v1": -21.583, "v2": 33.297, "v3": -34.002, "v4": 21.298, "amplitude": 35.019, "phase_angle": 18.045, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "7a", "suiteness": 0.223, "filter_rmsd": 0.039, "frame": { "rmsd": 0.011, "origin": [ 195.703, 296.076, 163.251 ], "x_axis": [ 0.912, -0.360, 0.195 ], "y_axis": [ -0.218, -0.024, 0.976 ], "z_axis": [ -0.347, -0.933, -0.101 ], "quaternion": [ 0.668, 0.714, -0.202, -0.053 ] } }, { "index": 1945, "index_chain": 419, "chain_name": "A", "nt_resnum": 420, "nt_name": "A", "nt_code": "A", "nt_id": "///A/420", "linked_nts": [ "///A/419", "///A/421" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -83.222, "beta": 178.334, "gamma": 60.088, "delta": 84.249, "epsilon": -120.818, "zeta": -103.873, "epsilon_zeta": -16.945, "bb_type": "--", "chi": -146.053, "glyco_bond": "anti", "C5prime_xyz": [ -1.389, 8.678, -0.282 ], "P_xyz": [ 1.204, 9.065, -0.468 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.690, "theta": -150.321, "eta_prime": -173.896, "theta_prime": -145.905, "eta_base": -109.852, "theta_base": -127.387, "v0": 2.296, "v1": -22.701, "v2": 33.371, "v3": -32.944, "v4": 19.413, "amplitude": 34.535, "phase_angle": 14.916, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.632, "filter_rmsd": 0.041, "frame": { "rmsd": 0.015, "origin": [ 197.263, 292.454, 164.319 ], "x_axis": [ 0.435, -0.065, 0.898 ], "y_axis": [ -0.899, 0.020, 0.437 ], "z_axis": [ -0.046, -0.998, -0.050 ], "quaternion": [ 0.593, 0.605, -0.398, 0.352 ] } }, { "index": 1946, "index_chain": 420, "chain_name": "A", "nt_resnum": 421, "nt_name": "A", "nt_code": "A", "nt_id": "///A/421", "linked_nts": [ "///A/420", "///A/422" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -56.437, "beta": 138.887, "gamma": 63.250, "delta": 83.020, "epsilon": -107.988, "zeta": -46.193, "epsilon_zeta": -61.795, "bb_type": "--", "chi": -137.115, "glyco_bond": "anti", "C5prime_xyz": [ -1.767, 8.664, -0.869 ], "P_xyz": [ 0.514, 8.558, -2.136 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.942, "theta": -79.935, "eta_prime": -174.803, "theta_prime": -79.100, "eta_base": -152.046, "theta_base": -52.558, "v0": -1.118, "v1": -20.912, "v2": 33.653, "v3": -35.218, "v4": 22.960, "amplitude": 35.889, "phase_angle": 20.334, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1L", "suiteness": 0.864, "filter_rmsd": 0.040, "frame": { "rmsd": 0.015, "origin": [ 197.081, 289.137, 164.622 ], "x_axis": [ 0.079, 0.080, 0.994 ], "y_axis": [ -0.965, -0.245, 0.096 ], "z_axis": [ 0.251, -0.966, 0.057 ], "quaternion": [ 0.472, 0.563, -0.393, 0.553 ] } }, { "index": 1947, "index_chain": 421, "chain_name": "A", "nt_resnum": 422, "nt_name": "U", "nt_code": "U", "nt_id": "///A/422", "linked_nts": [ "///A/421", "///A/423" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-stack,non-canonical,multiplet", "alpha": -79.635, "beta": -171.978, "gamma": 69.570, "delta": 80.541, "epsilon": -137.583, "zeta": -88.383, "epsilon_zeta": -49.200, "bb_type": "BI", "chi": -150.664, "glyco_bond": "anti", "C5prime_xyz": [ -1.600, 8.762, -0.027 ], "P_xyz": [ 0.956, 9.300, -0.147 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.844, "theta": -151.626, "eta_prime": -159.018, "theta_prime": -149.457, "eta_base": -115.432, "theta_base": -134.244, "v0": 0.896, "v1": -23.441, "v2": 35.885, "v3": -36.325, "v4": 22.410, "amplitude": 37.585, "phase_angle": 17.300, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.095, "filter_rmsd": 0.106, "frame": { "rmsd": 0.013, "origin": [ 189.756, 286.989, 172.247 ], "x_axis": [ -0.825, 0.531, -0.195 ], "y_axis": [ -0.043, -0.402, -0.914 ], "z_axis": [ -0.564, -0.746, 0.355 ], "quaternion": [ 0.179, -0.236, -0.517, 0.803 ] } }, { "index": 1948, "index_chain": 422, "chain_name": "A", "nt_resnum": 423, "nt_name": "A", "nt_code": "A", "nt_id": "///A/423", "linked_nts": [ "///A/422", "///A/424" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -57.852, "beta": 168.797, "gamma": 50.911, "delta": 76.606, "epsilon": -142.808, "zeta": -70.229, "epsilon_zeta": -72.579, "bb_type": "BI", "chi": -161.975, "glyco_bond": "anti", "C5prime_xyz": [ -1.779, 8.699, 0.600 ], "P_xyz": [ 0.701, 9.460, 0.737 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.733, "theta": -142.452, "eta_prime": 176.486, "theta_prime": -139.671, "eta_base": -160.430, "theta_base": -106.813, "v0": 0.883, "v1": -25.391, "v2": 38.922, "v3": -39.478, "v4": 24.313, "amplitude": 40.786, "phase_angle": 17.390, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.725, "filter_rmsd": 0.039, "frame": { "rmsd": 0.019, "origin": [ 186.374, 283.526, 174.911 ], "x_axis": [ -0.516, 0.622, -0.589 ], "y_axis": [ 0.401, -0.432, -0.808 ], "z_axis": [ -0.757, -0.653, -0.027 ], "quaternion": [ 0.080, -0.485, -0.527, 0.693 ] } }, { "index": 1949, "index_chain": 423, "chain_name": "A", "nt_resnum": 424, "nt_name": "C", "nt_code": "C", "nt_id": "///A/424", "linked_nts": [ "///A/423", "///A/425" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -65.828, "beta": 169.992, "gamma": 64.966, "delta": 77.711, "epsilon": -150.592, "zeta": -79.671, "epsilon_zeta": -70.921, "bb_type": "BI", "chi": -154.772, "glyco_bond": "anti", "C5prime_xyz": [ -1.670, 8.922, 0.145 ], "P_xyz": [ 0.822, 9.651, -0.123 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.969, "theta": -157.246, "eta_prime": -171.963, "theta_prime": -149.782, "eta_base": -126.092, "theta_base": -153.041, "v0": -3.884, "v1": -20.354, "v2": 35.481, "v3": -38.686, "v4": 26.887, "amplitude": 38.903, "phase_angle": 24.212, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.729, "filter_rmsd": 0.063, "frame": { "rmsd": 0.010, "origin": [ 182.427, 283.403, 174.403 ], "x_axis": [ -0.078, 0.304, -0.949 ], "y_axis": [ 0.496, -0.814, -0.302 ], "z_axis": [ -0.865, -0.495, -0.087 ], "quaternion": [ 0.072, 0.675, 0.296, -0.672 ] } }, { "index": 1950, "index_chain": 424, "chain_name": "A", "nt_resnum": 425, "nt_name": "U", "nt_code": "U", "nt_id": "///A/425", "linked_nts": [ "///A/424", "///A/426" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -62.870, "beta": -172.657, "gamma": 58.431, "delta": 142.367, "epsilon": -112.978, "zeta": 177.291, "epsilon_zeta": 69.731, "bb_type": "BII", "chi": -112.439, "glyco_bond": "anti", "C5prime_xyz": [ -2.154, 8.363, -1.644 ], "P_xyz": [ 0.227, 9.425, -1.439 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -163.862, "theta": 158.124, "eta_prime": -147.503, "theta_prime": 141.797, "eta_base": -153.138, "theta_base": 139.941, "v0": -23.367, "v1": 35.367, "v2": -33.199, "v3": 20.563, "v4": 1.555, "amplitude": 35.620, "phase_angle": 158.754, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.826, "filter_rmsd": 0.103, "frame": { "rmsd": 0.014, "origin": [ 178.987, 282.856, 175.194 ], "x_axis": [ 0.399, 0.228, -0.888 ], "y_axis": [ 0.268, -0.955, -0.125 ], "z_axis": [ -0.877, -0.188, -0.442 ], "quaternion": [ 0.019, 0.836, 0.148, -0.528 ] } }, { "index": 1951, "index_chain": 425, "chain_name": "A", "nt_resnum": 426, "nt_name": "A", "nt_code": "A", "nt_id": "///A/426", "linked_nts": [ "///A/425", "///A/427" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI,non-canonical,multiplet", "alpha": -120.713, "beta": 152.915, "gamma": 32.523, "delta": 79.643, "epsilon": -129.228, "zeta": -64.249, "epsilon_zeta": -64.979, "bb_type": "BI", "chi": -160.729, "glyco_bond": "anti", "C5prime_xyz": [ -1.376, 8.614, 0.554 ], "P_xyz": [ 1.218, 8.801, 0.822 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 134.451, "theta": -119.793, "eta_prime": 121.054, "theta_prime": -114.890, "eta_base": 127.769, "theta_base": -81.995, "v0": 4.281, "v1": -26.797, "v2": 38.008, "v3": -36.541, "v4": 20.308, "amplitude": 38.920, "phase_angle": 12.424, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "4g", "suiteness": 0.120, "filter_rmsd": 0.037, "frame": { "rmsd": 0.016, "origin": [ 177.433, 281.855, 181.129 ], "x_axis": [ 0.319, 0.152, -0.936 ], "y_axis": [ 0.087, -0.988, -0.131 ], "z_axis": [ -0.944, -0.040, -0.328 ], "quaternion": [ -0.028, 0.812, 0.074, -0.579 ] } }, { "index": 1952, "index_chain": 426, "chain_name": "A", "nt_resnum": 427, "nt_name": "C", "nt_code": "C", "nt_id": "///A/427", "linked_nts": [ "///A/426", "///A/428" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -63.989, "beta": 165.590, "gamma": 76.513, "delta": 79.524, "epsilon": -126.977, "zeta": -90.502, "epsilon_zeta": -36.476, "bb_type": "--", "chi": -160.224, "glyco_bond": "anti", "C5prime_xyz": [ -1.711, 8.951, 0.458 ], "P_xyz": [ 0.756, 9.744, 0.061 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.085, "theta": -120.387, "eta_prime": -155.581, "theta_prime": -132.522, "eta_base": -105.978, "theta_base": -114.182, "v0": -5.518, "v1": -17.752, "v2": 32.875, "v3": -37.001, "v4": 26.801, "amplitude": 36.898, "phase_angle": 27.007, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.231, "filter_rmsd": 0.065, "frame": { "rmsd": 0.009, "origin": [ 175.427, 282.153, 175.830 ], "x_axis": [ 0.422, -0.619, -0.663 ], "y_axis": [ -0.254, -0.782, 0.569 ], "z_axis": [ -0.871, -0.072, -0.487 ], "quaternion": [ 0.195, 0.820, -0.266, -0.467 ] } }, { "index": 1953, "index_chain": 427, "chain_name": "A", "nt_resnum": 428, "nt_name": "U", "nt_code": "U", "nt_id": "///A/428", "linked_nts": [ "///A/427", "///A/429" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 92.240, "beta": -154.546, "gamma": -125.851, "delta": 85.183, "epsilon": -113.851, "zeta": -88.499, "epsilon_zeta": -25.351, "bb_type": "--", "chi": -172.070, "glyco_bond": "anti", "C5prime_xyz": [ -1.027, 8.374, 1.303 ], "P_xyz": [ -0.139, 10.792, 0.911 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.419, "theta": -175.058, "eta_prime": 173.814, "theta_prime": -162.480, "eta_base": -150.357, "theta_base": -127.021, "v0": 7.235, "v1": -27.093, "v2": 35.728, "v3": -32.449, "v4": 15.889, "amplitude": 36.016, "phase_angle": 7.261, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.113, "frame": { "rmsd": 0.016, "origin": [ 172.371, 281.357, 171.067 ], "x_axis": [ 0.537, -0.833, -0.130 ], "y_axis": [ -0.289, -0.327, 0.900 ], "z_axis": [ -0.792, -0.446, -0.417 ], "quaternion": [ 0.446, 0.755, -0.372, -0.305 ] } }, { "index": 1954, "index_chain": 428, "chain_name": "A", "nt_resnum": 429, "nt_name": "G", "nt_code": "G", "nt_id": "///A/429", "linked_nts": [ "///A/428", "///A/430" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -57.562, "beta": 150.480, "gamma": 58.994, "delta": 76.628, "epsilon": -144.423, "zeta": -79.510, "epsilon_zeta": -64.912, "bb_type": "BI", "chi": -165.074, "glyco_bond": "anti", "C5prime_xyz": [ -1.693, 8.791, 0.776 ], "P_xyz": [ 0.812, 9.373, 0.364 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.389, "theta": -149.413, "eta_prime": 177.449, "theta_prime": -151.492, "eta_base": -140.833, "theta_base": -134.933, "v0": -0.799, "v1": -23.563, "v2": 37.613, "v3": -39.090, "v4": 25.186, "amplitude": 39.958, "phase_angle": 19.728, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.286, "filter_rmsd": 0.009, "frame": { "rmsd": 0.009, "origin": [ 170.744, 279.130, 168.427 ], "x_axis": [ 0.421, -0.797, 0.434 ], "y_axis": [ -0.606, 0.108, 0.788 ], "z_axis": [ -0.674, -0.595, -0.438 ], "quaternion": [ 0.522, 0.662, -0.530, -0.091 ] } }, { "index": 1955, "index_chain": 429, "chain_name": "A", "nt_resnum": 430, "nt_name": "A", "nt_code": "A", "nt_id": "///A/430", "linked_nts": [ "///A/429", "///A/431" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -64.567, "beta": 160.409, "gamma": 66.997, "delta": 79.133, "epsilon": -136.338, "zeta": -41.802, "epsilon_zeta": -94.537, "bb_type": "BI", "chi": -165.051, "glyco_bond": "anti", "C5prime_xyz": [ -1.894, 8.771, 0.736 ], "P_xyz": [ 0.585, 9.570, 0.528 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.932, "theta": -120.737, "eta_prime": -175.621, "theta_prime": -130.067, "eta_base": -145.664, "theta_base": -97.865, "v0": -3.445, "v1": -20.100, "v2": 34.584, "v3": -37.526, "v4": 25.839, "amplitude": 37.768, "phase_angle": 23.694, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.627, "filter_rmsd": 0.040, "frame": { "rmsd": 0.011, "origin": [ 170.171, 276.688, 165.998 ], "x_axis": [ 0.193, -0.591, 0.783 ], "y_axis": [ -0.807, 0.359, 0.469 ], "z_axis": [ -0.559, -0.722, -0.408 ], "quaternion": [ 0.535, 0.557, -0.627, 0.101 ] } }, { "index": 1956, "index_chain": 430, "chain_name": "A", "nt_resnum": 431, "nt_name": "C", "nt_code": "C", "nt_id": "///A/431", "linked_nts": [ "///A/430", "///A/432" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -124.734, "beta": 124.340, "gamma": 144.242, "delta": 82.518, "epsilon": -131.280, "zeta": -68.069, "epsilon_zeta": -63.211, "bb_type": "BI", "chi": -164.796, "glyco_bond": "anti", "C5prime_xyz": [ -1.389, 8.766, 0.810 ], "P_xyz": [ -0.557, 10.362, -1.085 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.462, "theta": -164.043, "eta_prime": -169.118, "theta_prime": -155.440, "eta_base": -117.715, "theta_base": -110.188, "v0": -0.949, "v1": -21.014, "v2": 33.666, "v3": -35.144, "v4": 22.786, "amplitude": 35.844, "phase_angle": 20.075, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.010, "filter_rmsd": 0.064, "frame": { "rmsd": 0.011, "origin": [ 170.238, 272.966, 166.522 ], "x_axis": [ -0.302, -0.383, 0.873 ], "y_axis": [ -0.912, 0.381, -0.148 ], "z_axis": [ -0.276, -0.841, -0.465 ], "quaternion": [ -0.392, -0.442, 0.733, -0.338 ] } }, { "index": 1957, "index_chain": 431, "chain_name": "A", "nt_resnum": 432, "nt_name": "U", "nt_code": "U", "nt_id": "///A/432", "linked_nts": [ "///A/431", "///A/433" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -70.090, "beta": 171.366, "gamma": 54.101, "delta": 80.971, "epsilon": -154.815, "zeta": -85.370, "epsilon_zeta": -69.446, "bb_type": "BI", "chi": -144.640, "glyco_bond": "anti", "C5prime_xyz": [ -1.761, 8.768, -0.390 ], "P_xyz": [ 0.756, 9.437, -0.662 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.788, "theta": -159.458, "eta_prime": 178.899, "theta_prime": -153.136, "eta_base": -123.002, "theta_base": -143.905, "v0": -1.367, "v1": -21.329, "v2": 34.561, "v3": -36.245, "v4": 23.771, "amplitude": 36.931, "phase_angle": 20.634, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.818, "filter_rmsd": 0.102, "frame": { "rmsd": 0.017, "origin": [ 168.693, 269.652, 167.292 ], "x_axis": [ -0.777, 0.147, 0.612 ], "y_axis": [ -0.548, 0.321, -0.772 ], "z_axis": [ -0.310, -0.935, -0.169 ], "quaternion": [ -0.306, -0.133, 0.753, -0.567 ] } }, { "index": 1958, "index_chain": 432, "chain_name": "A", "nt_resnum": 433, "nt_name": "G", "nt_code": "G", "nt_id": "///A/433", "linked_nts": [ "///A/432", "///A/434" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -55.043, "beta": 159.347, "gamma": 76.268, "delta": 146.684, "epsilon": -98.201, "zeta": -68.010, "epsilon_zeta": -30.192, "bb_type": "--", "chi": -124.931, "glyco_bond": "anti", "C5prime_xyz": [ -2.302, 8.654, -0.932 ], "P_xyz": [ 0.225, 9.326, -1.026 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -151.097, "theta": -65.854, "eta_prime": -128.507, "theta_prime": -103.846, "eta_base": -124.207, "theta_base": -150.029, "v0": -25.231, "v1": 38.973, "v2": -37.151, "v3": 23.470, "v4": 0.852, "amplitude": 39.532, "phase_angle": 160.013, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.405, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 168.154, 266.099, 167.450 ], "x_axis": [ -0.807, 0.466, 0.363 ], "y_axis": [ -0.352, 0.115, -0.929 ], "z_axis": [ -0.475, -0.877, 0.071 ], "quaternion": [ -0.308, 0.042, 0.680, -0.664 ] } }, { "index": 1959, "index_chain": 433, "chain_name": "A", "nt_resnum": 434, "nt_name": "A", "nt_code": "A", "nt_id": "///A/434", "linked_nts": [ "///A/433", "///A/435" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": -49.568, "beta": -120.209, "gamma": 56.986, "delta": 72.991, "epsilon": 44.505, "zeta": -86.185, "epsilon_zeta": -229.311, "bb_type": "--", "chi": -169.196, "glyco_bond": "anti", "C5prime_xyz": [ -1.265, 8.545, 1.021 ], "P_xyz": [ 1.015, 8.274, 2.313 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -103.936, "theta": 86.841, "eta_prime": -61.945, "theta_prime": 61.908, "eta_base": 0.058, "theta_base": 25.631, "v0": 5.802, "v1": -29.416, "v2": 40.878, "v3": -38.540, "v4": 20.616, "amplitude": 41.611, "phase_angle": 10.773, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.127, "filter_rmsd": 0.043, "frame": { "rmsd": 0.012, "origin": [ 172.363, 258.458, 151.355 ], "x_axis": [ 0.043, 0.888, -0.459 ], "y_axis": [ -0.518, 0.413, 0.750 ], "z_axis": [ 0.854, 0.205, 0.477 ], "quaternion": [ 0.695, 0.196, 0.472, 0.505 ] } }, { "index": 1960, "index_chain": 434, "chain_name": "A", "nt_resnum": 435, "nt_name": "C", "nt_code": "C", "nt_id": "///A/435", "linked_nts": [ "///A/434", "///A/436" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": 146.319, "beta": 102.991, "gamma": -171.518, "delta": 75.118, "epsilon": -141.821, "zeta": -79.151, "epsilon_zeta": -62.670, "bb_type": "BI", "chi": -165.287, "glyco_bond": "anti", "C5prime_xyz": [ -1.354, 8.758, 0.799 ], "P_xyz": [ -2.192, 11.071, -0.072 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 87.317, "theta": 145.425, "eta_prime": 81.562, "theta_prime": 167.612, "eta_base": 122.134, "theta_base": -173.105, "v0": 2.471, "v1": -27.617, "v2": 40.993, "v3": -40.507, "v4": 23.962, "amplitude": 42.488, "phase_angle": 15.244, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.070, "frame": { "rmsd": 0.016, "origin": [ 165.568, 263.959, 169.090 ], "x_axis": [ -0.754, 0.416, -0.507 ], "y_axis": [ 0.354, -0.393, -0.849 ], "z_axis": [ -0.553, -0.820, 0.150 ], "quaternion": [ 0.021, -0.350, -0.550, 0.758 ] } }, { "index": 1961, "index_chain": 435, "chain_name": "A", "nt_resnum": 436, "nt_name": "C", "nt_code": "C", "nt_id": "///A/436", "linked_nts": [ "///A/435", "///A/437" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": -65.001, "beta": -173.506, "gamma": 51.150, "delta": 80.305, "epsilon": -131.124, "zeta": -88.524, "epsilon_zeta": -42.600, "bb_type": "BI", "chi": -149.854, "glyco_bond": "anti", "C5prime_xyz": [ -1.633, 8.884, -0.123 ], "P_xyz": [ 0.831, 9.700, 0.203 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.632, "theta": -139.617, "eta_prime": -179.619, "theta_prime": -126.976, "eta_base": -167.605, "theta_base": -87.501, "v0": -3.528, "v1": -20.265, "v2": 34.937, "v3": -37.805, "v4": 26.158, "amplitude": 38.158, "phase_angle": 23.712, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.819, "filter_rmsd": 0.063, "frame": { "rmsd": 0.015, "origin": [ 162.711, 262.084, 171.545 ], "x_axis": [ -0.328, 0.494, -0.805 ], "y_axis": [ 0.531, -0.609, -0.590 ], "z_axis": [ -0.782, -0.621, -0.063 ], "quaternion": [ -0.013, -0.580, -0.442, 0.685 ] } }, { "index": 1962, "index_chain": 436, "chain_name": "A", "nt_resnum": 437, "nt_name": "G", "nt_code": "G", "nt_id": "///A/437", "linked_nts": [ "///A/436", "///A/438" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -33.396, "beta": 150.405, "gamma": 55.206, "delta": 139.476, "epsilon": -106.708, "zeta": 100.051, "epsilon_zeta": 153.241, "bb_type": "--", "chi": -119.508, "glyco_bond": "anti", "C5prime_xyz": [ -2.239, 8.670, -1.303 ], "P_xyz": [ 0.310, 9.242, -1.557 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -166.481, "theta": 125.432, "eta_prime": -134.745, "theta_prime": 120.856, "eta_base": -95.560, "theta_base": 143.172, "v0": -26.833, "v1": 37.203, "v2": -32.760, "v3": 18.029, "v4": 5.471, "amplitude": 36.783, "phase_angle": 152.953, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.296, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 159.968, 261.253, 168.801 ], "x_axis": [ 0.319, 0.203, -0.926 ], "y_axis": [ 0.380, -0.922, -0.071 ], "z_axis": [ -0.868, -0.329, -0.371 ], "quaternion": [ 0.080, 0.808, 0.180, -0.555 ] } }, { "index": 1963, "index_chain": 437, "chain_name": "A", "nt_resnum": 438, "nt_name": "A", "nt_code": "A", "nt_id": "///A/438", "linked_nts": [ "///A/437", "///A/439" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": 140.300, "beta": -152.101, "gamma": 173.690, "delta": 142.448, "epsilon": -109.542, "zeta": 120.754, "epsilon_zeta": 129.705, "bb_type": "--", "chi": -170.704, "glyco_bond": "anti", "C5prime_xyz": [ -1.920, 8.398, 1.444 ], "P_xyz": [ 0.462, 9.387, 1.312 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -125.180, "theta": 97.797, "eta_prime": -142.065, "theta_prime": 75.447, "eta_base": -146.174, "theta_base": -134.171, "v0": -22.677, "v1": 34.430, "v2": -32.420, "v3": 20.230, "v4": 1.385, "amplitude": 34.722, "phase_angle": 159.020, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.014, "origin": [ 156.972, 258.083, 179.122 ], "x_axis": [ -0.437, 0.498, -0.749 ], "y_axis": [ 0.446, -0.604, -0.661 ], "z_axis": [ -0.782, -0.622, 0.042 ], "quaternion": [ 0.018, -0.530, -0.445, 0.721 ] } }, { "index": 1964, "index_chain": 438, "chain_name": "A", "nt_resnum": 439, "nt_name": "U", "nt_code": "U", "nt_id": "///A/439", "linked_nts": [ "///A/438", "///A/440" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack,non-canonical,multiplet", "alpha": 84.913, "beta": 141.359, "gamma": 58.426, "delta": 140.825, "epsilon": -87.041, "zeta": -54.116, "epsilon_zeta": -32.925, "bb_type": "--", "chi": -106.172, "glyco_bond": "anti", "C5prime_xyz": [ -2.714, 8.218, -1.940 ], "P_xyz": [ -0.229, 8.760, -2.508 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 7.850, "theta": -29.986, "eta_prime": 22.282, "theta_prime": -51.652, "eta_base": -140.513, "theta_base": -9.125, "v0": -26.846, "v1": 38.177, "v2": -34.436, "v3": 19.810, "v4": 4.137, "amplitude": 37.986, "phase_angle": 155.032, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "6p", "suiteness": 0.215, "filter_rmsd": 0.103, "frame": { "rmsd": 0.015, "origin": [ 165.150, 241.244, 180.854 ], "x_axis": [ -0.876, -0.408, -0.260 ], "y_axis": [ -0.256, 0.847, -0.466 ], "z_axis": [ 0.410, -0.341, -0.846 ], "quaternion": [ 0.177, -0.176, 0.945, -0.213 ] } }, { "index": 1965, "index_chain": 439, "chain_name": "A", "nt_resnum": 440, "nt_name": "A", "nt_code": "A", "nt_id": "///A/440", "linked_nts": [ "///A/439", "///A/441" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -95.244, "beta": -178.327, "gamma": 80.585, "delta": 81.714, "epsilon": -141.029, "zeta": -52.543, "epsilon_zeta": -88.486, "bb_type": "BI", "chi": -172.378, "glyco_bond": "anti", "C5prime_xyz": [ -1.292, 8.556, 1.250 ], "P_xyz": [ 1.284, 8.932, 1.408 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 147.436, "theta": -118.715, "eta_prime": -165.490, "theta_prime": -119.904, "eta_base": -154.487, "theta_base": -73.886, "v0": 1.093, "v1": -23.487, "v2": 35.610, "v3": -35.913, "v4": 22.040, "amplitude": 37.225, "phase_angle": 16.936, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "2a", "suiteness": 0.047, "filter_rmsd": 0.048, "frame": { "rmsd": 0.021, "origin": [ 162.994, 256.808, 175.683 ], "x_axis": [ -0.298, -0.098, 0.949 ], "y_axis": [ 0.572, -0.815, 0.095 ], "z_axis": [ 0.764, 0.572, 0.299 ], "quaternion": [ -0.216, 0.552, 0.215, 0.777 ] } }, { "index": 1966, "index_chain": 440, "chain_name": "A", "nt_resnum": 441, "nt_name": "G", "nt_code": "G", "nt_id": "///A/441", "linked_nts": [ "///A/440", "///A/442" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -86.510, "beta": -176.357, "gamma": 56.776, "delta": 73.162, "epsilon": -137.969, "zeta": -44.438, "epsilon_zeta": -93.531, "bb_type": "BI", "chi": -162.053, "glyco_bond": "anti", "C5prime_xyz": [ -1.164, 8.769, 0.585 ], "P_xyz": [ 1.431, 9.194, 0.689 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 150.118, "theta": -96.746, "eta_prime": 174.105, "theta_prime": -131.916, "eta_base": -114.111, "theta_base": -175.854, "v0": 3.988, "v1": -28.841, "v2": 41.719, "v3": -40.208, "v4": 22.860, "amplitude": 42.860, "phase_angle": 13.252, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.460, "filter_rmsd": 0.028, "frame": { "rmsd": 0.028, "origin": [ 164.813, 258.035, 180.007 ], "x_axis": [ 0.235, -0.792, 0.564 ], "y_axis": [ 0.616, -0.327, -0.717 ], "z_axis": [ 0.752, 0.516, 0.410 ], "quaternion": [ 0.574, -0.537, 0.082, -0.613 ] } }, { "index": 1967, "index_chain": 441, "chain_name": "A", "nt_resnum": 442, "nt_name": "U", "nt_code": "U", "nt_id": "///A/442", "linked_nts": [ "///A/441", "///A/443" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 150.021, "beta": 118.961, "gamma": 169.786, "delta": 81.903, "epsilon": -106.437, "zeta": -73.345, "epsilon_zeta": -33.092, "bb_type": "--", "chi": -142.576, "glyco_bond": "anti", "C5prime_xyz": [ -2.663, 8.814, -0.724 ], "P_xyz": [ -3.477, 9.833, -2.999 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 107.800, "theta": -131.457, "eta_prime": 119.206, "theta_prime": -158.788, "eta_base": 84.276, "theta_base": 165.131, "v0": -17.891, "v1": -5.360, "v2": 24.728, "v3": -35.784, "v4": 33.973, "amplitude": 36.419, "phase_angle": 47.236, "puckering": "C4'-exo", "sugar_class": "--", "bin": "33t", "cluster": "1f", "suiteness": 0.329, "filter_rmsd": 0.095, "frame": { "rmsd": 0.016, "origin": [ 166.121, 265.595, 182.377 ], "x_axis": [ -0.916, -0.396, 0.068 ], "y_axis": [ 0.346, -0.863, -0.369 ], "z_axis": [ 0.205, -0.314, 0.927 ], "quaternion": [ -0.193, 0.071, -0.178, 0.962 ] } }, { "index": 1968, "index_chain": 442, "chain_name": "A", "nt_resnum": 443, "nt_name": "G", "nt_code": "G", "nt_id": "///A/443", "linked_nts": [ "///A/442", "///A/444" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI,non-canonical,multiplet", "alpha": 158.527, "beta": -169.105, "gamma": 59.466, "delta": 83.892, "epsilon": -139.079, "zeta": -66.258, "epsilon_zeta": -72.822, "bb_type": "BI", "chi": -174.065, "glyco_bond": "anti", "C5prime_xyz": [ -1.443, 8.579, 1.385 ], "P_xyz": [ 0.925, 8.703, 2.495 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 25.680, "theta": -127.437, "eta_prime": 65.324, "theta_prime": -128.244, "eta_base": 66.596, "theta_base": -92.061, "v0": 0.791, "v1": -22.179, "v2": 33.787, "v3": -34.251, "v4": 21.171, "amplitude": 35.394, "phase_angle": 17.332, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.241, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 170.427, 263.885, 187.962 ], "x_axis": [ 0.625, 0.664, -0.411 ], "y_axis": [ 0.464, -0.739, -0.488 ], "z_axis": [ -0.628, 0.114, -0.769 ], "quaternion": [ -0.170, 0.885, 0.318, -0.294 ] } }, { "index": 1969, "index_chain": 443, "chain_name": "A", "nt_resnum": 444, "nt_name": "A", "nt_code": "A", "nt_id": "///A/444", "linked_nts": [ "///A/443", "///A/445" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -93.605, "beta": -171.367, "gamma": 51.916, "delta": 70.059, "epsilon": 47.907, "zeta": 129.615, "epsilon_zeta": -81.708, "bb_type": "--", "chi": -161.763, "glyco_bond": "anti", "C5prime_xyz": [ -1.215, 8.620, 0.581 ], "P_xyz": [ 1.331, 9.048, 0.807 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.578, "theta": -128.042, "eta_prime": -169.638, "theta_prime": -133.126, "eta_base": -122.161, "theta_base": -105.054, "v0": 7.542, "v1": -31.890, "v2": 43.121, "v3": -39.678, "v4": 20.239, "amplitude": 43.632, "phase_angle": 8.775, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.289, "filter_rmsd": 0.044, "frame": { "rmsd": 0.015, "origin": [ 168.901, 265.732, 185.269 ], "x_axis": [ 0.887, -0.077, -0.455 ], "y_axis": [ -0.151, -0.980, -0.127 ], "z_axis": [ -0.436, 0.181, -0.882 ], "quaternion": [ -0.080, 0.968, -0.059, -0.230 ] } }, { "index": 1970, "index_chain": 444, "chain_name": "A", "nt_resnum": 445, "nt_name": "A", "nt_code": "A", "nt_id": "///A/445", "linked_nts": [ "///A/444", "///A/446" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix,multiplet", "alpha": -63.315, "beta": -168.646, "gamma": 69.006, "delta": 147.852, "epsilon": -92.540, "zeta": -55.826, "epsilon_zeta": -36.715, "bb_type": "--", "chi": -122.225, "glyco_bond": "anti", "C5prime_xyz": [ -1.563, 8.558, -1.106 ], "P_xyz": [ 0.813, 9.281, -0.334 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -84.416, "theta": -33.782, "eta_prime": -56.392, "theta_prime": -57.515, "eta_base": -81.642, "theta_base": -49.869, "v0": -22.204, "v1": 36.749, "v2": -36.540, "v3": 24.640, "v4": -1.787, "amplitude": 38.038, "phase_angle": 163.869, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.046, "frame": { "rmsd": 0.025, "origin": [ 159.506, 259.752, 174.128 ], "x_axis": [ 0.635, -0.737, -0.231 ], "y_axis": [ 0.271, -0.068, 0.960 ], "z_axis": [ -0.723, -0.672, 0.157 ], "quaternion": [ 0.657, 0.622, -0.188, -0.384 ] } }, { "index": 1971, "index_chain": 445, "chain_name": "A", "nt_resnum": 446, "nt_name": "C", "nt_code": "C", "nt_id": "///A/446", "linked_nts": [ "///A/445", "///A/447" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -74.504, "beta": -169.271, "gamma": 18.580, "delta": 142.021, "epsilon": -121.686, "zeta": -40.704, "epsilon_zeta": -80.983, "bb_type": "--", "chi": -99.939, "glyco_bond": "anti", "C5prime_xyz": [ -1.929, 8.002, -2.234 ], "P_xyz": [ 0.041, 9.719, -2.156 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 128.219, "theta": -30.693, "eta_prime": -179.412, "theta_prime": -102.414, "eta_base": -163.471, "theta_base": -167.892, "v0": -18.928, "v1": 31.593, "v2": -31.562, "v3": 21.414, "v4": -1.747, "amplitude": 32.790, "phase_angle": 164.269, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.067, "frame": { "rmsd": 0.015, "origin": [ 158.128, 253.283, 184.138 ], "x_axis": [ 0.836, -0.007, -0.549 ], "y_axis": [ 0.086, 0.989, 0.117 ], "z_axis": [ 0.542, -0.145, 0.828 ], "quaternion": [ 0.956, 0.069, 0.286, -0.024 ] } }, { "index": 1972, "index_chain": 446, "chain_name": "A", "nt_resnum": 447, "nt_name": "C", "nt_code": "C", "nt_id": "///A/447", "linked_nts": [ "///A/446", "///A/448" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,non-stack", "alpha": 152.993, "beta": 122.301, "gamma": 0.915, "delta": 146.135, "epsilon": -150.703, "zeta": 133.554, "epsilon_zeta": 75.743, "bb_type": "--", "chi": -66.208, "glyco_bond": "--", "C5prime_xyz": [ -2.997, 6.766, -3.098 ], "P_xyz": [ -0.638, 7.849, -3.533 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -81.908, "theta": 143.824, "eta_prime": 7.570, "theta_prime": 103.411, "eta_base": 69.451, "theta_base": 30.097, "v0": -18.121, "v1": 32.617, "v2": -33.854, "v3": 24.247, "v4": -4.037, "amplitude": 34.631, "phase_angle": 167.838, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.068, "frame": { "rmsd": 0.009, "origin": [ 152.671, 267.905, 194.717 ], "x_axis": [ -0.886, -0.440, 0.144 ], "y_axis": [ 0.381, -0.869, -0.315 ], "z_axis": [ 0.264, -0.224, 0.938 ], "quaternion": [ -0.214, 0.106, -0.140, 0.961 ] } }, { "index": 1973, "index_chain": 447, "chain_name": "A", "nt_resnum": 448, "nt_name": "A", "nt_code": "A", "nt_id": "///A/448", "linked_nts": [ "///A/447", "///A/449" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,helix-end,multiplet", "alpha": 76.777, "beta": 162.260, "gamma": 68.111, "delta": 150.013, "epsilon": -94.089, "zeta": 166.844, "epsilon_zeta": 99.066, "bb_type": "BII", "chi": -138.925, "glyco_bond": "anti", "C5prime_xyz": [ -2.067, 8.727, -0.244 ], "P_xyz": [ 0.353, 9.324, 0.573 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 3.137, "theta": 161.409, "eta_prime": 22.754, "theta_prime": 138.332, "eta_base": 93.063, "theta_base": 157.871, "v0": -24.666, "v1": 39.538, "v2": -38.442, "v3": 25.235, "v4": -0.564, "amplitude": 40.417, "phase_angle": 162.016, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.043, "frame": { "rmsd": 0.018, "origin": [ 167.108, 256.422, 188.126 ], "x_axis": [ -0.638, -0.768, 0.060 ], "y_axis": [ -0.660, 0.585, 0.471 ], "z_axis": [ -0.396, 0.261, -0.880 ], "quaternion": [ -0.129, -0.405, 0.881, 0.208 ] } }, { "index": 1974, "index_chain": 448, "chain_name": "A", "nt_resnum": 449, "nt_name": "G", "nt_code": "G", "nt_id": "///A/449", "linked_nts": [ "///A/448", "///A/450" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,multiplet", "alpha": -98.109, "beta": 84.630, "gamma": 171.954, "delta": 143.786, "epsilon": -156.107, "zeta": 138.556, "epsilon_zeta": 65.337, "bb_type": "--", "chi": -106.731, "glyco_bond": "anti", "C5prime_xyz": [ -2.508, 8.359, -1.824 ], "P_xyz": [ -3.448, 8.287, -4.275 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -54.687, "theta": 25.076, "eta_prime": -94.199, "theta_prime": 58.870, "eta_base": -100.315, "theta_base": 88.103, "v0": -28.060, "v1": 40.247, "v2": -36.208, "v3": 20.968, "v4": 4.168, "amplitude": 39.888, "phase_angle": 155.193, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "4s", "suiteness": 0.643, "filter_rmsd": 0.022, "frame": { "rmsd": 0.022, "origin": [ 173.400, 259.136, 189.178 ], "x_axis": [ 0.780, 0.452, -0.432 ], "y_axis": [ -0.256, 0.861, 0.439 ], "z_axis": [ 0.571, -0.232, 0.788 ], "quaternion": [ 0.926, 0.181, 0.271, 0.191 ] } }, { "index": 1975, "index_chain": 449, "chain_name": "A", "nt_resnum": 450, "nt_name": "U", "nt_code": "U", "nt_id": "///A/450", "linked_nts": [ "///A/449", "///A/451" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -62.458, "beta": 146.294, "gamma": 32.886, "delta": 83.155, "epsilon": -145.959, "zeta": -62.815, "epsilon_zeta": -83.143, "bb_type": "BI", "chi": -170.121, "glyco_bond": "anti", "C5prime_xyz": [ -1.363, 8.629, 1.149 ], "P_xyz": [ 1.134, 8.546, 1.919 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.835, "theta": -126.751, "eta_prime": 161.810, "theta_prime": -126.461, "eta_base": 163.006, "theta_base": -102.922, "v0": 0.032, "v1": -22.009, "v2": 34.324, "v3": -35.192, "v4": 22.236, "amplitude": 36.199, "phase_angle": 18.520, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "#a", "suiteness": 0.741, "filter_rmsd": 0.112, "frame": { "rmsd": 0.018, "origin": [ 165.606, 255.715, 192.515 ], "x_axis": [ 0.928, -0.024, -0.372 ], "y_axis": [ 0.159, 0.928, 0.338 ], "z_axis": [ 0.337, -0.373, 0.865 ], "quaternion": [ 0.964, 0.184, 0.184, -0.048 ] } }, { "index": 1976, "index_chain": 450, "chain_name": "A", "nt_resnum": 451, "nt_name": "A", "nt_code": "A", "nt_id": "///A/451", "linked_nts": [ "///A/450", "///A/452" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -76.084, "beta": 177.487, "gamma": 63.157, "delta": 80.603, "epsilon": -144.768, "zeta": -45.286, "epsilon_zeta": -99.483, "bb_type": "BI", "chi": -171.988, "glyco_bond": "anti", "C5prime_xyz": [ -1.978, 8.686, 1.105 ], "P_xyz": [ 0.442, 9.482, 1.711 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.790, "theta": -117.643, "eta_prime": -172.796, "theta_prime": -114.332, "eta_base": -130.389, "theta_base": -56.324, "v0": -4.612, "v1": -18.638, "v2": 33.342, "v3": -36.808, "v4": 26.174, "amplitude": 36.942, "phase_angle": 25.505, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.757, "filter_rmsd": 0.039, "frame": { "rmsd": 0.017, "origin": [ 168.241, 252.764, 195.326 ], "x_axis": [ 0.787, 0.556, -0.266 ], "y_axis": [ -0.460, 0.817, 0.347 ], "z_axis": [ 0.411, -0.150, 0.899 ], "quaternion": [ 0.936, 0.133, 0.181, 0.272 ] } }, { "index": 1977, "index_chain": 451, "chain_name": "A", "nt_resnum": 452, "nt_name": "C", "nt_code": "C", "nt_id": "///A/452", "linked_nts": [ "///A/451", "///A/453" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -92.239, "beta": 165.270, "gamma": 79.170, "delta": 80.043, "epsilon": -144.898, "zeta": -74.737, "epsilon_zeta": -70.161, "bb_type": "BI", "chi": -160.955, "glyco_bond": "anti", "C5prime_xyz": [ -1.377, 8.804, 0.542 ], "P_xyz": [ 1.137, 9.277, -0.002 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.051, "theta": -144.975, "eta_prime": -169.489, "theta_prime": -147.407, "eta_base": -85.768, "theta_base": -129.661, "v0": 0.070, "v1": -23.055, "v2": 36.128, "v3": -36.861, "v4": 23.277, "amplitude": 38.077, "phase_angle": 18.413, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.041, "filter_rmsd": 0.070, "frame": { "rmsd": 0.016, "origin": [ 171.869, 256.523, 197.787 ], "x_axis": [ -0.100, 0.951, 0.294 ], "y_axis": [ -0.838, -0.240, 0.490 ], "z_axis": [ 0.536, -0.197, 0.821 ], "quaternion": [ 0.608, 0.282, 0.100, 0.735 ] } }, { "index": 1978, "index_chain": 452, "chain_name": "A", "nt_resnum": 453, "nt_name": "C", "nt_code": "C", "nt_id": "///A/453", "linked_nts": [ "///A/452", "///A/454" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -60.239, "beta": 177.857, "gamma": 46.329, "delta": 76.744, "epsilon": -147.442, "zeta": -81.507, "epsilon_zeta": -65.935, "bb_type": "BI", "chi": -158.542, "glyco_bond": "anti", "C5prime_xyz": [ -1.602, 8.860, 0.414 ], "P_xyz": [ 0.867, 9.569, 0.884 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.227, "theta": -122.885, "eta_prime": 176.799, "theta_prime": -130.505, "eta_base": -151.387, "theta_base": -103.811, "v0": -2.247, "v1": -22.208, "v2": 36.959, "v3": -39.264, "v4": 26.084, "amplitude": 39.792, "phase_angle": 21.753, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.864, "filter_rmsd": 0.064, "frame": { "rmsd": 0.014, "origin": [ 175.112, 256.821, 200.368 ], "x_axis": [ -0.609, 0.747, 0.266 ], "y_axis": [ -0.693, -0.664, 0.279 ], "z_axis": [ 0.385, -0.014, 0.923 ], "quaternion": [ 0.403, 0.182, 0.074, 0.894 ] } }, { "index": 1979, "index_chain": 453, "chain_name": "A", "nt_resnum": 454, "nt_name": "G", "nt_code": "G", "nt_id": "///A/454", "linked_nts": [ "///A/453", "///A/455" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": 146.931, "beta": -157.504, "gamma": -177.700, "delta": 77.347, "epsilon": -106.152, "zeta": -87.183, "epsilon_zeta": -18.968, "bb_type": "--", "chi": -170.852, "glyco_bond": "anti", "C5prime_xyz": [ -1.307, 8.569, 1.186 ], "P_xyz": [ -0.015, 10.373, -0.162 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.283, "theta": -123.938, "eta_prime": 174.424, "theta_prime": -165.932, "eta_base": -142.518, "theta_base": 142.939, "v0": 5.024, "v1": -28.672, "v2": 40.193, "v3": -38.276, "v4": 20.972, "amplitude": 41.042, "phase_angle": 11.671, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.705, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 175.786, 259.683, 203.544 ], "x_axis": [ -0.941, 0.284, 0.185 ], "y_axis": [ -0.240, -0.944, 0.226 ], "z_axis": [ 0.238, 0.168, 0.957 ], "quaternion": [ 0.134, 0.108, 0.100, 0.980 ] } }, { "index": 1980, "index_chain": 454, "chain_name": "A", "nt_resnum": 455, "nt_name": "U", "nt_code": "U", "nt_id": "///A/455", "linked_nts": [ "///A/454", "///A/456" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI", "alpha": 163.442, "beta": 172.714, "gamma": 47.248, "delta": 82.862, "epsilon": -155.322, "zeta": -87.381, "epsilon_zeta": -67.942, "bb_type": "BI", "chi": -163.283, "glyco_bond": "anti", "C5prime_xyz": [ -1.180, 8.593, 0.803 ], "P_xyz": [ 1.373, 8.721, 1.343 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 5.476, "theta": -119.270, "eta_prime": 42.887, "theta_prime": -119.574, "eta_base": 28.499, "theta_base": -70.293, "v0": 3.871, "v1": -25.920, "v2": 37.106, "v3": -35.748, "v4": 20.042, "amplitude": 38.055, "phase_angle": 12.825, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1g", "suiteness": 0.304, "filter_rmsd": 0.110, "frame": { "rmsd": 0.022, "origin": [ 185.293, 256.768, 208.346 ], "x_axis": [ 0.200, -0.872, -0.446 ], "y_axis": [ -0.888, -0.354, 0.294 ], "z_axis": [ -0.414, 0.337, -0.845 ], "quaternion": [ -0.014, 0.775, -0.568, -0.278 ] } }, { "index": 1981, "index_chain": 455, "chain_name": "A", "nt_resnum": 456, "nt_name": "G", "nt_code": "G", "nt_id": "///A/456", "linked_nts": [ "///A/455", "///A/457" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": 162.310, "beta": -128.145, "gamma": 159.614, "delta": 84.602, "epsilon": -118.545, "zeta": -93.560, "epsilon_zeta": -24.985, "bb_type": "--", "chi": -155.758, "glyco_bond": "anti", "C5prime_xyz": [ -1.210, 8.701, 0.342 ], "P_xyz": [ 0.720, 8.914, -1.412 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.304, "theta": -147.584, "eta_prime": -165.914, "theta_prime": -151.533, "eta_base": -97.419, "theta_base": -136.081, "v0": 1.868, "v1": -22.436, "v2": 33.309, "v3": -33.162, "v4": 19.779, "amplitude": 34.585, "phase_angle": 15.607, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.181, "filter_rmsd": 0.023, "frame": { "rmsd": 0.023, "origin": [ 184.371, 254.797, 204.832 ], "x_axis": [ -0.577, -0.778, -0.250 ], "y_axis": [ -0.816, 0.532, 0.227 ], "z_axis": [ -0.044, 0.335, -0.941 ], "quaternion": [ 0.059, -0.456, 0.873, 0.161 ] } }, { "index": 1982, "index_chain": 456, "chain_name": "A", "nt_resnum": 457, "nt_name": "A", "nt_code": "A", "nt_id": "///A/457", "linked_nts": [ "///A/456", "///A/458" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": -65.028, "beta": 150.153, "gamma": 63.183, "delta": 77.713, "epsilon": -130.097, "zeta": -33.992, "epsilon_zeta": -96.105, "bb_type": "--", "chi": -138.811, "glyco_bond": "anti", "C5prime_xyz": [ -1.680, 8.680, -0.796 ], "P_xyz": [ 0.640, 8.858, -1.992 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.635, "theta": -96.061, "eta_prime": 175.805, "theta_prime": -90.265, "eta_base": -155.721, "theta_base": -58.587, "v0": -1.416, "v1": -22.307, "v2": 36.353, "v3": -38.132, "v4": 24.978, "amplitude": 38.855, "phase_angle": 20.674, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.306, "filter_rmsd": 0.042, "frame": { "rmsd": 0.022, "origin": [ 184.126, 255.308, 201.508 ], "x_axis": [ -0.858, -0.513, -0.007 ], "y_axis": [ -0.513, 0.858, 0.010 ], "z_axis": [ 0.001, 0.013, -1.000 ], "quaternion": [ 0.002, -0.266, 0.964, 0.006 ] } }, { "index": 1983, "index_chain": 457, "chain_name": "A", "nt_resnum": 458, "nt_name": "G", "nt_code": "G", "nt_id": "///A/458", "linked_nts": [ "///A/457", "///A/459" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -92.413, "beta": 163.094, "gamma": 94.860, "delta": 79.947, "epsilon": -145.680, "zeta": -72.631, "epsilon_zeta": -73.049, "bb_type": "BI", "chi": -168.622, "glyco_bond": "anti", "C5prime_xyz": [ -1.246, 8.611, 0.987 ], "P_xyz": [ 1.098, 9.217, 0.003 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.256, "theta": -146.906, "eta_prime": -150.282, "theta_prime": -151.538, "eta_base": -85.855, "theta_base": -142.534, "v0": 4.812, "v1": -28.053, "v2": 39.541, "v3": -37.655, "v4": 20.767, "amplitude": 40.403, "phase_angle": 11.860, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 175.241, 257.039, 200.547 ], "x_axis": [ -0.576, 0.766, 0.286 ], "y_axis": [ 0.715, 0.642, -0.279 ], "z_axis": [ -0.397, 0.044, -0.917 ], "quaternion": [ -0.193, 0.418, 0.885, -0.066 ] } }, { "index": 1984, "index_chain": 458, "chain_name": "A", "nt_resnum": 459, "nt_name": "G", "nt_code": "G", "nt_id": "///A/459", "linked_nts": [ "///A/458", "///A/460" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -64.831, "beta": 164.247, "gamma": 74.382, "delta": 74.325, "epsilon": -136.443, "zeta": -54.668, "epsilon_zeta": -81.775, "bb_type": "BI", "chi": -175.756, "glyco_bond": "anti", "C5prime_xyz": [ -1.972, 8.769, 1.350 ], "P_xyz": [ 0.451, 9.711, 1.557 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 179.393, "theta": -124.922, "eta_prime": -167.728, "theta_prime": -121.633, "eta_base": -142.538, "theta_base": -65.044, "v0": -5.318, "v1": -20.236, "v2": 36.703, "v3": -40.694, "v4": 29.021, "amplitude": 40.794, "phase_angle": 25.878, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.330, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 171.708, 255.759, 197.893 ], "x_axis": [ -0.247, 0.941, 0.233 ], "y_axis": [ 0.903, 0.311, -0.296 ], "z_axis": [ -0.350, 0.138, -0.926 ], "quaternion": [ -0.185, 0.585, 0.788, -0.050 ] } }, { "index": 1985, "index_chain": 459, "chain_name": "A", "nt_resnum": 460, "nt_name": "G", "nt_code": "G", "nt_id": "///A/460", "linked_nts": [ "///A/459", "///A/461" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -77.300, "beta": 169.892, "gamma": 64.713, "delta": 77.179, "epsilon": -131.853, "zeta": -145.750, "epsilon_zeta": 13.898, "bb_type": "--", "chi": -161.094, "glyco_bond": "anti", "C5prime_xyz": [ -1.465, 8.761, 0.578 ], "P_xyz": [ 1.099, 9.230, 0.338 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.131, "theta": 170.730, "eta_prime": -174.224, "theta_prime": 154.103, "eta_base": -93.621, "theta_base": 143.862, "v0": 2.462, "v1": -26.475, "v2": 39.370, "v3": -38.839, "v4": 22.861, "amplitude": 40.784, "phase_angle": 15.131, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.555, "filter_rmsd": 0.021, "frame": { "rmsd": 0.021, "origin": [ 171.030, 260.536, 195.311 ], "x_axis": [ 0.670, 0.706, -0.229 ], "y_axis": [ 0.586, -0.693, -0.420 ], "z_axis": [ -0.455, 0.148, -0.878 ], "quaternion": [ -0.158, 0.900, 0.359, -0.190 ] } }, { "index": 1986, "index_chain": 460, "chain_name": "A", "nt_resnum": 461, "nt_name": "A", "nt_code": "A", "nt_id": "///A/461", "linked_nts": [ "///A/460", "///A/462" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": 60.334, "beta": -106.658, "gamma": -121.256, "delta": 81.530, "epsilon": -127.456, "zeta": -89.195, "epsilon_zeta": -38.261, "bb_type": "--", "chi": -175.147, "glyco_bond": "anti", "C5prime_xyz": [ -1.244, 8.393, 1.414 ], "P_xyz": [ -1.362, 10.723, 0.252 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -162.371, "theta": 164.422, "eta_prime": 173.047, "theta_prime": -174.178, "eta_base": 152.552, "theta_base": -116.973, "v0": 4.815, "v1": -27.110, "v2": 37.790, "v3": -36.012, "v4": 19.741, "amplitude": 38.575, "phase_angle": 11.578, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.020, "origin": [ 162.399, 253.389, 194.223 ], "x_axis": [ -0.177, 0.975, 0.138 ], "y_axis": [ 0.863, 0.221, -0.455 ], "z_axis": [ -0.474, 0.039, -0.880 ], "quaternion": [ -0.203, 0.609, 0.755, -0.138 ] } }, { "index": 1987, "index_chain": 461, "chain_name": "A", "nt_resnum": 462, "nt_name": "A", "nt_code": "A", "nt_id": "///A/462", "linked_nts": [ "///A/461", "///A/463" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": -39.295, "beta": 149.629, "gamma": 48.759, "delta": 83.475, "epsilon": -129.148, "zeta": -31.867, "epsilon_zeta": -97.281, "bb_type": "--", "chi": -159.203, "glyco_bond": "anti", "C5prime_xyz": [ -1.017, 8.599, 0.531 ], "P_xyz": [ 1.597, 8.392, 0.430 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.317, "theta": -101.918, "eta_prime": -167.347, "theta_prime": -113.412, "eta_base": -106.163, "theta_base": -59.582, "v0": 4.580, "v1": -24.924, "v2": 34.802, "v3": -33.067, "v4": 18.044, "amplitude": 35.503, "phase_angle": 11.405, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.295, "filter_rmsd": 0.042, "frame": { "rmsd": 0.014, "origin": [ 160.448, 255.712, 191.588 ], "x_axis": [ 0.503, 0.806, -0.312 ], "y_axis": [ 0.646, -0.590, -0.485 ], "z_axis": [ -0.575, 0.043, -0.817 ], "quaternion": [ -0.155, 0.853, 0.426, -0.260 ] } }, { "index": 1988, "index_chain": 462, "chain_name": "A", "nt_resnum": 463, "nt_name": "A", "nt_code": "A", "nt_id": "///A/463", "linked_nts": [ "///A/462", "///A/464" ], "nt_type": "RNA", "dbn": ".", "summary": "syn", "alpha": -124.242, "beta": 115.195, "gamma": 153.477, "delta": 81.155, "epsilon": -106.646, "zeta": -69.961, "epsilon_zeta": -36.685, "bb_type": "--", "chi": 8.170, "glyco_bond": "syn", "C5prime_xyz": [ -5.434, 3.942, -1.171 ], "P_xyz": [ -7.256, 3.149, 0.498 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 179.947, "theta": -135.837, "eta_prime": -166.250, "theta_prime": -123.783, "eta_base": -84.597, "theta_base": -113.052, "v0": -0.880, "v1": -21.412, "v2": 34.228, "v3": -35.677, "v4": 23.134, "amplitude": 36.418, "phase_angle": 19.970, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.010, "filter_rmsd": 0.046, "frame": { "rmsd": 0.017, "origin": [ 162.750, 257.186, 186.126 ], "x_axis": [ -0.154, 0.898, 0.412 ], "y_axis": [ -0.780, -0.366, 0.508 ], "z_axis": [ 0.607, -0.243, 0.757 ], "quaternion": [ 0.556, 0.337, 0.088, 0.754 ] } }, { "index": 1989, "index_chain": 463, "chain_name": "A", "nt_resnum": 464, "nt_name": "G", "nt_code": "G", "nt_id": "///A/464", "linked_nts": [ "///A/463", "///A/465" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -113.136, "beta": -143.043, "gamma": 153.056, "delta": 79.613, "epsilon": -126.318, "zeta": -71.081, "epsilon_zeta": -55.236, "bb_type": "--", "chi": 175.893, "glyco_bond": "anti", "C5prime_xyz": [ -1.855, 8.552, 1.802 ], "P_xyz": [ 0.508, 9.557, 1.433 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -133.222, "theta": -136.015, "eta_prime": -111.347, "theta_prime": -132.884, "eta_base": -119.607, "theta_base": -119.832, "v0": -4.802, "v1": -18.619, "v2": 33.582, "v3": -37.312, "v4": 26.550, "amplitude": 37.311, "phase_angle": 25.837, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.022, "frame": { "rmsd": 0.022, "origin": [ 154.945, 254.376, 174.553 ], "x_axis": [ 0.600, -0.764, -0.239 ], "y_axis": [ 0.221, -0.129, 0.967 ], "z_axis": [ -0.769, -0.633, 0.092 ], "quaternion": [ 0.625, 0.640, -0.212, -0.394 ] } }, { "index": 1990, "index_chain": 464, "chain_name": "A", "nt_resnum": 465, "nt_name": "G", "nt_code": "G", "nt_id": "///A/465", "linked_nts": [ "///A/464", "///A/466" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -55.889, "beta": -172.268, "gamma": 45.019, "delta": 140.092, "epsilon": -99.791, "zeta": -123.038, "epsilon_zeta": 23.246, "bb_type": "--", "chi": -123.674, "glyco_bond": "anti", "C5prime_xyz": [ -2.261, 8.718, -1.122 ], "P_xyz": [ -0.245, 10.220, -0.387 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -169.479, "theta": -79.530, "eta_prime": -145.450, "theta_prime": -109.396, "eta_base": -125.356, "theta_base": -161.876, "v0": -26.536, "v1": 37.471, "v2": -33.439, "v3": 19.016, "v4": 4.590, "amplitude": 37.117, "phase_angle": 154.277, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.562, "filter_rmsd": 0.017, "frame": { "rmsd": 0.017, "origin": [ 152.498, 251.933, 172.591 ], "x_axis": [ 0.805, -0.534, 0.258 ], "y_axis": [ -0.200, 0.166, 0.966 ], "z_axis": [ -0.559, -0.829, 0.027 ], "quaternion": [ 0.707, 0.635, -0.289, -0.118 ] } }, { "index": 1991, "index_chain": 465, "chain_name": "A", "nt_resnum": 466, "nt_name": "C", "nt_code": "C", "nt_id": "///A/466", "linked_nts": [ "///A/465", "///A/467" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": 52.063, "beta": 154.176, "gamma": 49.256, "delta": 82.526, "epsilon": -135.582, "zeta": -63.675, "epsilon_zeta": -71.907, "bb_type": "BI", "chi": -166.552, "glyco_bond": "anti", "C5prime_xyz": [ -1.208, 8.664, 0.948 ], "P_xyz": [ 1.403, 8.612, 1.198 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -102.437, "theta": -118.415, "eta_prime": -61.369, "theta_prime": -120.471, "eta_base": 5.134, "theta_base": -80.261, "v0": 1.980, "v1": -24.026, "v2": 35.842, "v3": -35.511, "v4": 21.167, "amplitude": 37.201, "phase_angle": 15.539, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "8d", "suiteness": 0.596, "filter_rmsd": 0.071, "frame": { "rmsd": 0.018, "origin": [ 137.048, 257.410, 180.892 ], "x_axis": [ 0.447, 0.824, 0.348 ], "y_axis": [ 0.895, -0.417, -0.161 ], "z_axis": [ 0.012, 0.384, -0.923 ], "quaternion": [ -0.163, 0.835, 0.515, 0.108 ] } }, { "index": 1992, "index_chain": 466, "chain_name": "A", "nt_resnum": 467, "nt_name": "G", "nt_code": "G", "nt_id": "///A/467", "linked_nts": [ "///A/466", "///A/468" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -97.083, "beta": -176.947, "gamma": 69.437, "delta": 79.057, "epsilon": -129.041, "zeta": -102.710, "epsilon_zeta": -26.331, "bb_type": "--", "chi": -149.755, "glyco_bond": "anti", "C5prime_xyz": [ -1.408, 8.732, -0.125 ], "P_xyz": [ 1.102, 9.113, -0.681 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.791, "theta": -125.137, "eta_prime": 174.163, "theta_prime": -165.035, "eta_base": -126.114, "theta_base": 136.231, "v0": 3.036, "v1": -26.799, "v2": 39.061, "v3": -38.300, "v4": 22.268, "amplitude": 40.317, "phase_angle": 14.340, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.184, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 138.252, 260.521, 179.216 ], "x_axis": [ 0.942, 0.198, 0.270 ], "y_axis": [ 0.326, -0.731, -0.600 ], "z_axis": [ 0.079, 0.653, -0.753 ], "quaternion": [ -0.338, 0.925, 0.142, 0.094 ] } }, { "index": 1993, "index_chain": 467, "chain_name": "A", "nt_resnum": 468, "nt_name": "A", "nt_code": "A", "nt_id": "///A/468", "linked_nts": [ "///A/467", "///A/469" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix-end", "alpha": 137.746, "beta": -158.890, "gamma": 78.266, "delta": 87.472, "epsilon": -130.786, "zeta": -91.300, "epsilon_zeta": -39.487, "bb_type": "--", "chi": -156.631, "glyco_bond": "anti", "C5prime_xyz": [ -1.537, 8.710, 0.360 ], "P_xyz": [ 1.036, 9.033, 0.747 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 42.412, "theta": -137.875, "eta_prime": 58.076, "theta_prime": -134.634, "eta_base": 30.079, "theta_base": -100.152, "v0": -1.255, "v1": -18.474, "v2": 29.971, "v3": -31.508, "v4": 20.684, "amplitude": 32.053, "phase_angle": 20.764, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.019, "origin": [ 130.665, 258.885, 170.794 ], "x_axis": [ -0.116, -0.993, 0.003 ], "y_axis": [ 0.991, -0.116, -0.072 ], "z_axis": [ 0.071, -0.006, 0.997 ], "quaternion": [ 0.664, -0.025, 0.026, -0.747 ] } }, { "index": 1994, "index_chain": 468, "chain_name": "A", "nt_resnum": 469, "nt_name": "A", "nt_code": "A", "nt_id": "///A/469", "linked_nts": [ "///A/468", "///A/470" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -45.374, "beta": 155.397, "gamma": 46.723, "delta": 85.060, "epsilon": -154.554, "zeta": -79.516, "epsilon_zeta": -75.038, "bb_type": "BI", "chi": -139.467, "glyco_bond": "anti", "C5prime_xyz": [ -1.532, 8.683, -0.682 ], "P_xyz": [ 1.051, 8.953, -1.019 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.018, "theta": -123.154, "eta_prime": -173.718, "theta_prime": -120.449, "eta_base": -127.733, "theta_base": -101.997, "v0": -0.162, "v1": -19.708, "v2": 30.944, "v3": -31.863, "v4": 20.304, "amplitude": 32.709, "phase_angle": 18.908, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.413, "filter_rmsd": 0.040, "frame": { "rmsd": 0.013, "origin": [ 130.916, 257.523, 174.344 ], "x_axis": [ 0.512, -0.849, -0.129 ], "y_axis": [ 0.859, 0.500, 0.116 ], "z_axis": [ -0.034, -0.170, 0.985 ], "quaternion": [ 0.865, 0.082, 0.027, -0.493 ] } }, { "index": 1995, "index_chain": 469, "chain_name": "A", "nt_resnum": 470, "nt_name": "A", "nt_code": "A", "nt_id": "///A/470", "linked_nts": [ "///A/469", "///A/471" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BII,non-canonical,helix", "alpha": -168.115, "beta": -155.190, "gamma": -176.977, "delta": 156.318, "epsilon": -64.902, "zeta": 123.179, "epsilon_zeta": 171.919, "bb_type": "BII", "chi": -110.794, "glyco_bond": "anti", "C5prime_xyz": [ -2.217, 8.305, -1.532 ], "P_xyz": [ -0.558, 8.793, -3.494 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -76.388, "theta": 115.919, "eta_prime": -90.599, "theta_prime": 103.929, "eta_base": -89.511, "theta_base": 74.462, "v0": -23.027, "v1": 40.276, "v2": -41.021, "v3": 28.840, "v4": -3.864, "amplitude": 42.208, "phase_angle": 166.376, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "1t", "suiteness": 0.674, "filter_rmsd": 0.044, "frame": { "rmsd": 0.018, "origin": [ 134.284, 254.399, 180.614 ], "x_axis": [ 0.927, -0.330, -0.179 ], "y_axis": [ 0.364, 0.907, 0.213 ], "z_axis": [ 0.092, -0.262, 0.961 ], "quaternion": [ 0.974, 0.122, 0.069, -0.178 ] } }, { "index": 1996, "index_chain": 470, "chain_name": "A", "nt_resnum": 471, "nt_name": "A", "nt_code": "A", "nt_id": "///A/471", "linked_nts": [ "///A/470", "///A/472" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix-end,multiplet", "alpha": 27.022, "beta": 179.918, "gamma": -175.764, "delta": 79.335, "epsilon": -143.027, "zeta": 84.248, "epsilon_zeta": 132.724, "bb_type": "--", "chi": 171.785, "glyco_bond": "anti", "C5prime_xyz": [ -1.397, 8.098, 2.123 ], "P_xyz": [ 0.031, 10.235, 2.093 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 100.393, "theta": -45.164, "eta_prime": 81.762, "theta_prime": -69.905, "eta_base": 66.088, "theta_base": -78.296, "v0": 4.775, "v1": -27.753, "v2": 39.058, "v3": -37.265, "v4": 20.374, "amplitude": 39.901, "phase_angle": 11.799, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "6n", "suiteness": 0.010, "filter_rmsd": 0.047, "frame": { "rmsd": 0.018, "origin": [ 132.889, 254.858, 176.800 ], "x_axis": [ 0.973, 0.231, -0.009 ], "y_axis": [ -0.204, 0.878, 0.432 ], "z_axis": [ 0.108, -0.419, 0.902 ], "quaternion": [ 0.969, 0.220, 0.030, 0.112 ] } }, { "index": 1997, "index_chain": 471, "chain_name": "A", "nt_resnum": 472, "nt_name": "G", "nt_code": "G", "nt_id": "///A/472", "linked_nts": [ "///A/471", "///A/473" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,canonical,non-canonical,helix-end,multiplet", "alpha": -94.672, "beta": -97.067, "gamma": -75.325, "delta": 142.198, "epsilon": -144.826, "zeta": 127.165, "epsilon_zeta": 88.009, "bb_type": "--", "chi": -88.679, "glyco_bond": "anti", "C5prime_xyz": [ -3.052, 7.816, -2.455 ], "P_xyz": [ -5.014, 8.846, -3.875 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 142.318, "theta": 36.612, "eta_prime": 171.947, "theta_prime": 62.659, "eta_base": -154.391, "theta_base": 95.181, "v0": -29.007, "v1": 40.512, "v2": -35.920, "v3": 20.022, "v4": 5.335, "amplitude": 40.096, "phase_angle": 153.619, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 139.330, 254.624, 183.299 ], "x_axis": [ 0.636, 0.771, 0.018 ], "y_axis": [ -0.705, 0.572, 0.418 ], "z_axis": [ 0.312, -0.279, 0.908 ], "quaternion": [ 0.883, 0.197, 0.083, 0.418 ] } }, { "index": 1998, "index_chain": 472, "chain_name": "A", "nt_resnum": 473, "nt_name": "A", "nt_code": "A", "nt_id": "///A/473", "linked_nts": [ "///A/472", "///A/474" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix,multiplet", "alpha": -71.958, "beta": 153.796, "gamma": 56.349, "delta": 82.355, "epsilon": -149.518, "zeta": 171.436, "epsilon_zeta": 39.046, "bb_type": "--", "chi": -157.955, "glyco_bond": "anti", "C5prime_xyz": [ -1.812, 8.747, 0.327 ], "P_xyz": [ 0.734, 9.253, 0.097 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -172.120, "theta": 95.618, "eta_prime": -175.029, "theta_prime": 104.650, "eta_base": -172.976, "theta_base": 132.317, "v0": -2.818, "v1": -19.393, "v2": 32.852, "v3": -35.465, "v4": 24.143, "amplitude": 35.704, "phase_angle": 23.055, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.720, "filter_rmsd": 0.040, "frame": { "rmsd": 0.017, "origin": [ 131.573, 246.225, 185.372 ], "x_axis": [ 0.901, 0.004, 0.434 ], "y_axis": [ -0.145, 0.946, 0.291 ], "z_axis": [ -0.409, -0.325, 0.853 ], "quaternion": [ 0.962, 0.160, -0.219, 0.039 ] } }, { "index": 1999, "index_chain": 473, "chain_name": "A", "nt_resnum": 474, "nt_name": "A", "nt_code": "A", "nt_id": "///A/474", "linked_nts": [ "///A/473", "///A/475" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,multiplet", "alpha": -79.840, "beta": 161.778, "gamma": 51.569, "delta": 84.766, "epsilon": -145.866, "zeta": -33.698, "epsilon_zeta": -112.168, "bb_type": "BI", "chi": -168.904, "glyco_bond": "anti", "C5prime_xyz": [ -1.058, 8.469, 1.073 ], "P_xyz": [ 1.565, 8.443, 1.216 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 179.167, "theta": -97.969, "eta_prime": 171.893, "theta_prime": -97.014, "eta_base": 150.966, "theta_base": -50.864, "v0": 5.551, "v1": -26.193, "v2": 35.662, "v3": -33.398, "v4": 17.637, "amplitude": 36.208, "phase_angle": 9.969, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "3a", "suiteness": 0.874, "filter_rmsd": 0.038, "frame": { "rmsd": 0.013, "origin": [ 118.335, 250.545, 185.461 ], "x_axis": [ 0.547, -0.755, -0.362 ], "y_axis": [ 0.811, 0.370, 0.453 ], "z_axis": [ -0.208, -0.541, 0.815 ], "quaternion": [ 0.826, 0.301, 0.047, -0.474 ] } }, { "index": 2000, "index_chain": 474, "chain_name": "A", "nt_resnum": 475, "nt_name": "C", "nt_code": "C", "nt_id": "///A/475", "linked_nts": [ "///A/474", "///A/476" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -99.073, "beta": -175.676, "gamma": 68.437, "delta": 78.977, "epsilon": -134.042, "zeta": -86.588, "epsilon_zeta": -47.454, "bb_type": "BI", "chi": -162.209, "glyco_bond": "anti", "C5prime_xyz": [ -1.193, 8.729, 0.670 ], "P_xyz": [ 1.428, 8.953, 0.688 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.928, "theta": -147.599, "eta_prime": -170.170, "theta_prime": -144.572, "eta_base": -92.060, "theta_base": -124.960, "v0": 3.473, "v1": -26.221, "v2": 37.977, "v3": -36.862, "v4": 21.050, "amplitude": 39.068, "phase_angle": 13.573, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.028, "filter_rmsd": 0.075, "frame": { "rmsd": 0.017, "origin": [ 122.831, 246.092, 187.385 ], "x_axis": [ 0.941, 0.213, 0.263 ], "y_axis": [ -0.329, 0.759, 0.562 ], "z_axis": [ -0.079, -0.616, 0.784 ], "quaternion": [ 0.933, 0.316, -0.092, 0.145 ] } }, { "index": 2001, "index_chain": 475, "chain_name": "A", "nt_resnum": 476, "nt_name": "C", "nt_code": "C", "nt_id": "///A/476", "linked_nts": [ "///A/475", "///A/477" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -64.936, "beta": 160.737, "gamma": 67.574, "delta": 81.368, "epsilon": -133.727, "zeta": -81.780, "epsilon_zeta": -51.947, "bb_type": "BI", "chi": -156.490, "glyco_bond": "anti", "C5prime_xyz": [ -1.345, 8.805, 0.319 ], "P_xyz": [ 1.196, 9.124, -0.238 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.510, "theta": -142.521, "eta_prime": -175.702, "theta_prime": -143.900, "eta_base": -146.446, "theta_base": -125.235, "v0": 0.679, "v1": -22.933, "v2": 35.198, "v3": -35.720, "v4": 22.137, "amplitude": 36.915, "phase_angle": 17.543, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.542, "filter_rmsd": 0.069, "frame": { "rmsd": 0.013, "origin": [ 123.682, 243.194, 189.572 ], "x_axis": [ 0.676, 0.632, 0.378 ], "y_axis": [ -0.724, 0.475, 0.501 ], "z_axis": [ 0.137, -0.612, 0.779 ], "quaternion": [ 0.856, 0.325, -0.070, 0.396 ] } }, { "index": 2002, "index_chain": 476, "chain_name": "A", "nt_resnum": 477, "nt_name": "C", "nt_code": "C", "nt_id": "///A/477", "linked_nts": [ "///A/476", "///A/478" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -74.999, "beta": 164.449, "gamma": 64.239, "delta": 77.925, "epsilon": -137.014, "zeta": -86.870, "epsilon_zeta": -50.144, "bb_type": "BI", "chi": -153.581, "glyco_bond": "anti", "C5prime_xyz": [ -1.579, 8.839, 0.126 ], "P_xyz": [ 0.898, 9.360, -0.479 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.087, "theta": -152.113, "eta_prime": 173.775, "theta_prime": -152.383, "eta_base": -153.600, "theta_base": -143.594, "v0": 0.255, "v1": -23.928, "v2": 37.252, "v3": -38.092, "v4": 23.818, "amplitude": 39.217, "phase_angle": 18.215, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.666, "filter_rmsd": 0.067, "frame": { "rmsd": 0.012, "origin": [ 125.450, 241.249, 192.245 ], "x_axis": [ 0.199, 0.915, 0.351 ], "y_axis": [ -0.918, 0.048, 0.395 ], "z_axis": [ 0.344, -0.400, 0.849 ], "quaternion": [ 0.724, 0.275, -0.002, 0.633 ] } }, { "index": 2003, "index_chain": 477, "chain_name": "A", "nt_resnum": 478, "nt_name": "C", "nt_code": "C", "nt_id": "///A/478", "linked_nts": [ "///A/477", "///A/479" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -70.045, "beta": 169.520, "gamma": 59.156, "delta": 77.663, "epsilon": -136.256, "zeta": -65.367, "epsilon_zeta": -70.889, "bb_type": "BI", "chi": -152.388, "glyco_bond": "anti", "C5prime_xyz": [ -1.661, 8.869, 0.047 ], "P_xyz": [ 0.829, 9.551, -0.326 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.800, "theta": -131.152, "eta_prime": 171.719, "theta_prime": -127.791, "eta_base": -170.678, "theta_base": -85.393, "v0": -0.785, "v1": -23.267, "v2": 37.168, "v3": -38.597, "v4": 24.823, "amplitude": 39.477, "phase_angle": 19.691, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.745, "filter_rmsd": 0.064, "frame": { "rmsd": 0.011, "origin": [ 128.128, 239.926, 195.034 ], "x_axis": [ -0.277, 0.956, 0.100 ], "y_axis": [ -0.891, -0.294, 0.344 ], "z_axis": [ 0.358, 0.006, 0.934 ], "quaternion": [ 0.584, 0.145, 0.111, 0.791 ] } }, { "index": 2004, "index_chain": 478, "chain_name": "A", "nt_resnum": 479, "nt_name": "G", "nt_code": "G", "nt_id": "///A/479", "linked_nts": [ "///A/478", "///A/480" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -71.036, "beta": 177.278, "gamma": 59.470, "delta": 79.973, "epsilon": -114.518, "zeta": -115.797, "epsilon_zeta": 1.279, "bb_type": "--", "chi": -151.226, "glyco_bond": "anti", "C5prime_xyz": [ -1.330, 8.764, -0.062 ], "P_xyz": [ 1.226, 9.191, -0.391 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.016, "theta": -121.351, "eta_prime": -171.050, "theta_prime": -159.442, "eta_base": -117.374, "theta_base": 145.026, "v0": 2.760, "v1": -25.455, "v2": 37.162, "v3": -36.534, "v4": 21.350, "amplitude": 38.392, "phase_angle": 14.543, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.843, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 127.111, 243.413, 198.809 ], "x_axis": [ -0.947, 0.320, 0.015 ], "y_axis": [ -0.299, -0.900, 0.318 ], "z_axis": [ 0.116, 0.296, 0.948 ], "quaternion": [ 0.159, 0.034, 0.158, 0.974 ] } }, { "index": 2005, "index_chain": 479, "chain_name": "A", "nt_resnum": 480, "nt_name": "G", "nt_code": "G", "nt_id": "///A/480", "linked_nts": [ "///A/479", "///A/481" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": 135.228, "beta": -144.719, "gamma": 69.832, "delta": 93.015, "epsilon": -73.772, "zeta": -146.925, "epsilon_zeta": 73.153, "bb_type": "--", "chi": -157.311, "glyco_bond": "anti", "C5prime_xyz": [ -1.545, 8.762, 0.380 ], "P_xyz": [ 0.852, 8.959, 1.423 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 58.820, "theta": 176.739, "eta_prime": 73.834, "theta_prime": 159.968, "eta_base": 42.683, "theta_base": 123.333, "v0": -2.126, "v1": -15.927, "v2": 26.627, "v3": -28.578, "v4": 19.407, "amplitude": 28.850, "phase_angle": 22.642, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 135.650, 238.272, 205.083 ], "x_axis": [ 0.102, -0.933, -0.344 ], "y_axis": [ -0.969, -0.172, 0.179 ], "z_axis": [ -0.227, 0.315, -0.922 ], "quaternion": [ -0.046, 0.741, -0.642, -0.193 ] } }, { "index": 2006, "index_chain": 480, "chain_name": "A", "nt_resnum": 481, "nt_name": "A", "nt_code": "A", "nt_id": "///A/481", "linked_nts": [ "///A/480", "///A/482" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,non-stack,non-canonical", "alpha": -121.193, "beta": 100.186, "gamma": 32.048, "delta": 84.404, "epsilon": -110.241, "zeta": -69.341, "epsilon_zeta": -40.900, "bb_type": "--", "chi": 178.210, "glyco_bond": "--", "C5prime_xyz": [ -1.730, 8.526, 1.700 ], "P_xyz": [ 0.599, 7.575, 2.483 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 104.240, "theta": -63.705, "eta_prime": 103.947, "theta_prime": -77.284, "eta_base": 89.872, "theta_base": -74.638, "v0": -3.959, "v1": -16.992, "v2": 30.035, "v3": -33.184, "v4": 23.482, "amplitude": 33.213, "phase_angle": 25.268, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.044, "frame": { "rmsd": 0.016, "origin": [ 130.867, 243.670, 210.817 ], "x_axis": [ 0.004, -0.956, 0.295 ], "y_axis": [ -0.841, -0.163, -0.517 ], "z_axis": [ 0.542, -0.246, -0.804 ], "quaternion": [ -0.097, 0.702, -0.640, 0.298 ] } }, { "index": 2007, "index_chain": 481, "chain_name": "A", "nt_resnum": 482, "nt_name": "G", "nt_code": "G", "nt_id": "///A/482", "linked_nts": [ "///A/481", "///A/483" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -166.906, "beta": -174.752, "gamma": 173.159, "delta": 81.623, "epsilon": -145.697, "zeta": -54.073, "epsilon_zeta": -91.624, "bb_type": "BI", "chi": -179.697, "glyco_bond": "anti", "C5prime_xyz": [ -1.743, 8.551, 1.608 ], "P_xyz": [ -0.263, 10.557, 0.844 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.986, "theta": -152.734, "eta_prime": -155.255, "theta_prime": -145.894, "eta_base": -116.922, "theta_base": -89.207, "v0": -2.183, "v1": -20.410, "v2": 33.895, "v3": -36.071, "v4": 24.145, "amplitude": 36.538, "phase_angle": 21.925, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1f", "suiteness": 0.010, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 134.335, 237.589, 201.950 ], "x_axis": [ -0.724, -0.676, -0.137 ], "y_axis": [ -0.689, 0.715, 0.117 ], "z_axis": [ 0.019, 0.179, -0.984 ], "quaternion": [ 0.042, -0.369, 0.925, 0.080 ] } }, { "index": 2008, "index_chain": 482, "chain_name": "A", "nt_resnum": 483, "nt_name": "A", "nt_code": "A", "nt_id": "///A/483", "linked_nts": [ "///A/482", "///A/484" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -90.013, "beta": -178.780, "gamma": 66.048, "delta": 84.301, "epsilon": -141.073, "zeta": -47.188, "epsilon_zeta": -93.885, "bb_type": "BI", "chi": -165.205, "glyco_bond": "anti", "C5prime_xyz": [ -1.529, 8.626, 0.831 ], "P_xyz": [ 1.042, 9.018, 1.123 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.151, "theta": -111.976, "eta_prime": -175.780, "theta_prime": -110.502, "eta_base": -101.913, "theta_base": -57.835, "v0": 1.242, "v1": -22.862, "v2": 34.461, "v3": -34.653, "v4": 21.079, "amplitude": 35.960, "phase_angle": 16.604, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.364, "filter_rmsd": 0.042, "frame": { "rmsd": 0.015, "origin": [ 132.045, 236.608, 198.069 ], "x_axis": [ -0.974, 0.226, 0.032 ], "y_axis": [ 0.228, 0.951, 0.209 ], "z_axis": [ 0.017, 0.211, -0.977 ], "quaternion": [ -0.004, 0.115, 0.988, 0.107 ] } }, { "index": 2009, "index_chain": 483, "chain_name": "A", "nt_resnum": 484, "nt_name": "G", "nt_code": "G", "nt_id": "///A/484", "linked_nts": [ "///A/483", "///A/485" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -100.684, "beta": 165.595, "gamma": 90.190, "delta": 81.885, "epsilon": -142.929, "zeta": -56.829, "epsilon_zeta": -86.100, "bb_type": "BI", "chi": -154.666, "glyco_bond": "anti", "C5prime_xyz": [ -1.140, 8.745, 0.199 ], "P_xyz": [ 1.208, 9.022, -0.939 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 158.350, "theta": -133.930, "eta_prime": -167.427, "theta_prime": -144.209, "eta_base": -87.800, "theta_base": -133.340, "v0": 3.141, "v1": -25.316, "v2": 36.834, "v3": -35.898, "v4": 20.723, "amplitude": 37.954, "phase_angle": 13.952, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.014, "frame": { "rmsd": 0.014, "origin": [ 128.368, 240.356, 195.774 ], "x_axis": [ -0.209, 0.976, 0.059 ], "y_axis": [ 0.958, 0.217, -0.187 ], "z_axis": [ -0.195, 0.017, -0.981 ], "quaternion": [ -0.082, 0.623, 0.776, -0.055 ] } }, { "index": 2010, "index_chain": 484, "chain_name": "A", "nt_resnum": 485, "nt_name": "G", "nt_code": "G", "nt_id": "///A/485", "linked_nts": [ "///A/484", "///A/486" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -116.925, "beta": 141.148, "gamma": 127.918, "delta": 82.357, "epsilon": -129.964, "zeta": -78.117, "epsilon_zeta": -51.847, "bb_type": "BI", "chi": -174.755, "glyco_bond": "anti", "C5prime_xyz": [ -1.406, 8.579, 1.356 ], "P_xyz": [ 0.274, 10.034, -0.030 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.466, "theta": -158.747, "eta_prime": -171.481, "theta_prime": -157.024, "eta_base": -140.565, "theta_base": -129.830, "v0": -0.301, "v1": -21.249, "v2": 33.478, "v3": -34.604, "v4": 22.063, "amplitude": 35.433, "phase_angle": 19.120, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 125.862, 241.079, 192.861 ], "x_axis": [ 0.182, 0.980, 0.080 ], "y_axis": [ 0.947, -0.153, -0.282 ], "z_axis": [ -0.265, 0.127, -0.956 ], "quaternion": [ -0.135, 0.757, 0.637, -0.061 ] } }, { "index": 2011, "index_chain": 485, "chain_name": "A", "nt_resnum": 486, "nt_name": "G", "nt_code": "G", "nt_id": "///A/486", "linked_nts": [ "///A/485", "///A/487" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -62.157, "beta": 171.797, "gamma": 49.342, "delta": 77.005, "epsilon": -143.735, "zeta": -29.274, "epsilon_zeta": -114.461, "bb_type": "--", "chi": -160.056, "glyco_bond": "anti", "C5prime_xyz": [ -1.450, 8.830, 0.510 ], "P_xyz": [ 1.053, 9.501, 0.756 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.351, "theta": -123.097, "eta_prime": 176.573, "theta_prime": -136.299, "eta_base": -143.589, "theta_base": -131.075, "v0": -0.777, "v1": -23.263, "v2": 37.167, "v3": -38.585, "v4": 24.885, "amplitude": 39.481, "phase_angle": 19.712, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.767, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 123.652, 242.831, 189.836 ], "x_axis": [ 0.728, 0.684, 0.046 ], "y_axis": [ 0.663, -0.685, -0.304 ], "z_axis": [ -0.176, 0.252, -0.952 ], "quaternion": [ -0.151, 0.917, 0.367, -0.035 ] } }, { "index": 2012, "index_chain": 486, "chain_name": "A", "nt_resnum": 487, "nt_name": "G", "nt_code": "G", "nt_id": "///A/487", "linked_nts": [ "///A/486", "///A/488" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": -136.674, "beta": 106.812, "gamma": 161.064, "delta": 78.568, "epsilon": -123.939, "zeta": -59.730, "epsilon_zeta": -64.209, "bb_type": "--", "chi": -178.339, "glyco_bond": "anti", "C5prime_xyz": [ -1.237, 8.417, 1.600 ], "P_xyz": [ -1.064, 10.696, 0.317 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.509, "theta": -166.521, "eta_prime": 178.582, "theta_prime": -150.379, "eta_base": -159.881, "theta_base": -98.174, "v0": 4.620, "v1": -27.310, "v2": 38.615, "v3": -36.891, "v4": 20.356, "amplitude": 39.482, "phase_angle": 12.026, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1e", "suiteness": 0.010, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 121.991, 246.071, 187.794 ], "x_axis": [ 0.882, 0.467, 0.065 ], "y_axis": [ 0.453, -0.803, -0.387 ], "z_axis": [ -0.129, 0.371, -0.920 ], "quaternion": [ -0.200, 0.949, 0.242, -0.017 ] } }, { "index": 2013, "index_chain": 487, "chain_name": "A", "nt_resnum": 488, "nt_name": "A", "nt_code": "A", "nt_id": "///A/488", "linked_nts": [ "///A/487", "///A/489" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -66.134, "beta": 165.593, "gamma": 68.129, "delta": 78.562, "epsilon": -149.101, "zeta": -79.801, "epsilon_zeta": -69.300, "bb_type": "BI", "chi": -167.163, "glyco_bond": "anti", "C5prime_xyz": [ -1.854, 8.710, 0.921 ], "P_xyz": [ 0.659, 9.450, 0.993 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.474, "theta": -119.145, "eta_prime": -165.489, "theta_prime": -129.244, "eta_base": -95.542, "theta_base": -84.867, "v0": -1.738, "v1": -21.742, "v2": 35.679, "v3": -37.693, "v4": 24.831, "amplitude": 38.260, "phase_angle": 21.168, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.456, "filter_rmsd": 0.042, "frame": { "rmsd": 0.016, "origin": [ 125.388, 248.875, 185.216 ], "x_axis": [ 0.898, -0.384, -0.215 ], "y_axis": [ -0.438, -0.821, -0.365 ], "z_axis": [ -0.037, 0.422, -0.906 ], "quaternion": [ -0.207, 0.952, -0.216, -0.066 ] } }, { "index": 2014, "index_chain": 488, "chain_name": "A", "nt_resnum": 489, "nt_name": "G", "nt_code": "G", "nt_id": "///A/489", "linked_nts": [ "///A/488", "///A/490" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": 156.349, "beta": -153.865, "gamma": 163.240, "delta": 79.789, "epsilon": -134.707, "zeta": -76.007, "epsilon_zeta": -58.700, "bb_type": "BI", "chi": -177.084, "glyco_bond": "anti", "C5prime_xyz": [ -1.053, 8.343, 1.532 ], "P_xyz": [ 0.907, 9.598, 0.351 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 146.791, "theta": -153.299, "eta_prime": 171.350, "theta_prime": -151.954, "eta_base": -116.832, "theta_base": -133.404, "v0": 8.389, "v1": -30.399, "v2": 39.851, "v3": -36.006, "v4": 17.411, "amplitude": 40.133, "phase_angle": 6.802, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.506, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 128.092, 249.119, 181.628 ], "x_axis": [ 0.234, -0.907, -0.349 ], "y_axis": [ -0.970, -0.193, -0.150 ], "z_axis": [ 0.069, 0.373, -0.925 ], "quaternion": [ -0.171, 0.767, -0.612, -0.091 ] } }, { "index": 2015, "index_chain": 489, "chain_name": "A", "nt_resnum": 490, "nt_name": "U", "nt_code": "U", "nt_id": "///A/490", "linked_nts": [ "///A/489", "///A/491" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -70.742, "beta": -175.195, "gamma": 57.745, "delta": 79.981, "epsilon": -126.161, "zeta": -77.972, "epsilon_zeta": -48.189, "bb_type": "--", "chi": -151.386, "glyco_bond": "anti", "C5prime_xyz": [ -1.587, 8.740, 0.030 ], "P_xyz": [ 0.958, 9.312, 0.073 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.934, "theta": -130.935, "eta_prime": -176.785, "theta_prime": -125.687, "eta_base": -150.216, "theta_base": -77.095, "v0": 2.482, "v1": -25.498, "v2": 37.480, "v3": -37.045, "v4": 21.767, "amplitude": 38.795, "phase_angle": 14.965, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.839, "filter_rmsd": 0.109, "frame": { "rmsd": 0.018, "origin": [ 130.599, 249.715, 178.959 ], "x_axis": [ -0.313, -0.914, -0.257 ], "y_axis": [ -0.922, 0.357, -0.148 ], "z_axis": [ 0.227, 0.191, -0.955 ], "quaternion": [ 0.149, -0.567, 0.810, 0.013 ] } }, { "index": 2016, "index_chain": 490, "chain_name": "A", "nt_resnum": 491, "nt_name": "G", "nt_code": "G", "nt_id": "///A/491", "linked_nts": [ "///A/490", "///A/492" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,multiplet", "alpha": -56.768, "beta": 159.409, "gamma": 52.543, "delta": 79.457, "epsilon": -121.974, "zeta": -103.768, "epsilon_zeta": -18.205, "bb_type": "--", "chi": -157.959, "glyco_bond": "anti", "C5prime_xyz": [ -1.246, 8.693, 0.353 ], "P_xyz": [ 1.330, 8.837, -0.060 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 164.824, "theta": -117.901, "eta_prime": -176.466, "theta_prime": -159.308, "eta_base": -114.619, "theta_base": 138.532, "v0": 3.177, "v1": -26.035, "v2": 37.769, "v3": -36.962, "v4": 21.326, "amplitude": 38.933, "phase_angle": 14.044, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.660, "filter_rmsd": 0.023, "frame": { "rmsd": 0.023, "origin": [ 128.670, 247.405, 175.141 ], "x_axis": [ -0.954, -0.292, 0.066 ], "y_axis": [ -0.297, 0.951, -0.087 ], "z_axis": [ -0.037, -0.102, -0.994 ], "quaternion": [ -0.026, -0.149, 0.987, -0.048 ] } }, { "index": 2017, "index_chain": 491, "chain_name": "A", "nt_resnum": 492, "nt_name": "A", "nt_code": "A", "nt_id": "///A/492", "linked_nts": [ "///A/491", "///A/493" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BI,non-canonical,helix-end", "alpha": 134.522, "beta": -163.082, "gamma": 78.799, "delta": 87.828, "epsilon": -132.459, "zeta": -85.822, "epsilon_zeta": -46.637, "bb_type": "BI", "chi": -161.797, "glyco_bond": "anti", "C5prime_xyz": [ -1.219, 8.564, 0.718 ], "P_xyz": [ 1.392, 8.620, 1.014 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 34.676, "theta": -136.730, "eta_prime": 55.009, "theta_prime": -134.451, "eta_base": 29.610, "theta_base": -98.373, "v0": 4.426, "v1": -23.553, "v2": 32.674, "v3": -31.019, "v4": 16.847, "amplitude": 33.307, "phase_angle": 11.187, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.041, "frame": { "rmsd": 0.018, "origin": [ 136.549, 253.418, 169.652 ], "x_axis": [ 0.021, 0.843, 0.537 ], "y_axis": [ -0.986, 0.105, -0.128 ], "z_axis": [ -0.164, -0.527, 0.834 ], "quaternion": [ 0.700, 0.143, -0.251, 0.653 ] } }, { "index": 2018, "index_chain": 492, "chain_name": "A", "nt_resnum": 493, "nt_name": "A", "nt_code": "A", "nt_id": "///A/493", "linked_nts": [ "///A/492", "///A/494" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": -59.158, "beta": 159.821, "gamma": 54.068, "delta": 87.071, "epsilon": -135.862, "zeta": -85.290, "epsilon_zeta": -50.572, "bb_type": "BI", "chi": -146.996, "glyco_bond": "anti", "C5prime_xyz": [ -1.241, 8.619, -0.175 ], "P_xyz": [ 1.364, 8.621, -0.522 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.251, "theta": -125.022, "eta_prime": -175.864, "theta_prime": -120.971, "eta_base": -126.524, "theta_base": -111.970, "v0": 4.556, "v1": -24.094, "v2": 33.322, "v3": -31.659, "v4": 17.090, "amplitude": 33.956, "phase_angle": 11.089, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.645, "filter_rmsd": 0.043, "frame": { "rmsd": 0.016, "origin": [ 136.045, 252.772, 173.010 ], "x_axis": [ -0.608, 0.742, 0.282 ], "y_axis": [ -0.792, -0.547, -0.271 ], "z_axis": [ -0.047, -0.388, 0.920 ], "quaternion": [ 0.437, 0.067, -0.188, 0.877 ] } }, { "index": 2019, "index_chain": 493, "chain_name": "A", "nt_resnum": 494, "nt_name": "A", "nt_code": "A", "nt_id": "///A/494", "linked_nts": [ "///A/493", "///A/495" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,helix-end", "alpha": -147.568, "beta": -173.478, "gamma": 161.426, "delta": 140.799, "epsilon": -120.849, "zeta": 134.914, "epsilon_zeta": 104.237, "bb_type": "BII", "chi": -116.913, "glyco_bond": "anti", "C5prime_xyz": [ -2.042, 8.456, -1.431 ], "P_xyz": [ -0.347, 9.012, -3.299 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -137.942, "theta": 106.260, "eta_prime": -130.339, "theta_prime": 72.161, "eta_base": -126.882, "theta_base": 75.728, "v0": -24.182, "v1": 35.505, "v2": -32.743, "v3": 19.595, "v4": 2.701, "amplitude": 35.573, "phase_angle": 156.991, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "1t", "suiteness": 0.107, "filter_rmsd": 0.045, "frame": { "rmsd": 0.018, "origin": [ 133.734, 251.784, 179.789 ], "x_axis": [ -0.839, 0.528, -0.134 ], "y_axis": [ -0.461, -0.819, -0.342 ], "z_axis": [ -0.290, -0.225, 0.930 ], "quaternion": [ 0.261, -0.112, -0.150, 0.947 ] } }, { "index": 2020, "index_chain": 494, "chain_name": "A", "nt_resnum": 495, "nt_name": "U", "nt_code": "U", "nt_id": "///A/495", "linked_nts": [ "///A/494", "///A/496" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": 30.783, "beta": -153.472, "gamma": 63.550, "delta": 142.577, "epsilon": -113.501, "zeta": 81.843, "epsilon_zeta": 164.656, "bb_type": "--", "chi": -139.004, "glyco_bond": "anti", "C5prime_xyz": [ -1.683, 8.700, -0.253 ], "P_xyz": [ 0.372, 9.253, 1.270 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -10.183, "theta": 77.127, "eta_prime": -3.879, "theta_prime": 41.897, "eta_base": -10.528, "theta_base": -4.509, "v0": -20.633, "v1": 32.939, "v2": -32.053, "v3": 20.985, "v4": -0.417, "amplitude": 33.714, "phase_angle": 161.939, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.102, "frame": { "rmsd": 0.004, "origin": [ 136.826, 233.245, 176.163 ], "x_axis": [ -0.590, -0.406, 0.698 ], "y_axis": [ -0.177, 0.909, 0.378 ], "z_axis": [ -0.788, 0.099, -0.608 ], "quaternion": [ -0.422, -0.165, 0.881, 0.136 ] } }, { "index": 2021, "index_chain": 495, "chain_name": "A", "nt_resnum": 496, "nt_name": "A", "nt_code": "A", "nt_id": "///A/496", "linked_nts": [ "///A/495", "///A/497" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-canonical,helix-end,multiplet", "alpha": -102.389, "beta": -152.827, "gamma": -144.346, "delta": 79.939, "epsilon": -117.931, "zeta": -88.013, "epsilon_zeta": -29.918, "bb_type": "--", "chi": -166.269, "glyco_bond": "anti", "C5prime_xyz": [ -1.665, 8.737, 0.858 ], "P_xyz": [ -1.197, 10.990, -0.408 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -4.575, "theta": 179.432, "eta_prime": 3.420, "theta_prime": -157.478, "eta_base": 51.072, "theta_base": -135.573, "v0": -2.673, "v1": -21.058, "v2": 35.422, "v3": -37.879, "v4": 25.577, "amplitude": 38.330, "phase_angle": 22.461, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.042, "frame": { "rmsd": 0.018, "origin": [ 134.592, 253.468, 176.617 ], "x_axis": [ -0.957, -0.109, -0.268 ], "y_axis": [ 0.169, -0.962, -0.212 ], "z_axis": [ -0.235, -0.248, 0.940 ], "quaternion": [ -0.071, -0.128, -0.117, 0.982 ] } }, { "index": 2022, "index_chain": 496, "chain_name": "A", "nt_resnum": 497, "nt_name": "G", "nt_code": "G", "nt_id": "///A/497", "linked_nts": [ "///A/496", "///A/498" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII,non-canonical,helix,multiplet", "alpha": -55.405, "beta": -160.653, "gamma": 67.015, "delta": 142.013, "epsilon": -126.765, "zeta": 143.724, "epsilon_zeta": 89.512, "bb_type": "BII", "chi": -86.089, "glyco_bond": "anti", "C5prime_xyz": [ -3.056, 7.707, -2.526 ], "P_xyz": [ -0.866, 8.832, -3.407 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -149.317, "theta": 134.312, "eta_prime": -131.912, "theta_prime": 119.669, "eta_base": -126.757, "theta_base": 154.231, "v0": -28.028, "v1": 39.392, "v2": -35.052, "v3": 19.735, "v4": 4.973, "amplitude": 39.005, "phase_angle": 153.982, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.415, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 130.986, 251.601, 182.656 ], "x_axis": [ -0.760, -0.518, -0.392 ], "y_axis": [ 0.560, -0.829, 0.010 ], "z_axis": [ -0.330, -0.212, 0.920 ], "quaternion": [ -0.288, -0.193, -0.054, 0.937 ] } }, { "index": 2023, "index_chain": 497, "chain_name": "A", "nt_resnum": 498, "nt_name": "A", "nt_code": "A", "nt_id": "///A/498", "linked_nts": [ "///A/497", "///A/499" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -82.106, "beta": 131.115, "gamma": 60.640, "delta": 81.624, "epsilon": -140.991, "zeta": 136.604, "epsilon_zeta": 82.405, "bb_type": "--", "chi": -176.931, "glyco_bond": "anti", "C5prime_xyz": [ -1.787, 8.588, 1.434 ], "P_xyz": [ 0.819, 8.751, 1.399 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.540, "theta": 94.763, "eta_prime": 171.167, "theta_prime": 43.116, "eta_base": -160.168, "theta_base": -37.371, "v0": -4.595, "v1": -18.130, "v2": 32.497, "v3": -36.052, "v4": 25.647, "amplitude": 36.068, "phase_angle": 25.714, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.486, "filter_rmsd": 0.038, "frame": { "rmsd": 0.017, "origin": [ 135.259, 254.403, 188.536 ], "x_axis": [ -0.822, -0.561, 0.097 ], "y_axis": [ 0.478, -0.773, -0.418 ], "z_axis": [ 0.310, -0.297, 0.903 ], "quaternion": [ -0.278, 0.109, -0.191, 0.935 ] } }, { "index": 2024, "index_chain": 498, "chain_name": "A", "nt_resnum": 499, "nt_name": "A", "nt_code": "A", "nt_id": "///A/499", "linked_nts": [ "///A/498", "///A/500" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti", "alpha": 56.114, "beta": -142.194, "gamma": 61.853, "delta": 145.025, "epsilon": -103.018, "zeta": -86.104, "epsilon_zeta": -16.914, "bb_type": "--", "chi": -157.614, "glyco_bond": "anti", "C5prime_xyz": [ -2.417, 8.700, 0.715 ], "P_xyz": [ -1.289, 9.157, 3.049 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 15.768, "theta": -31.964, "eta_prime": 45.195, "theta_prime": -56.508, "eta_base": 117.167, "theta_base": -38.502, "v0": -26.374, "v1": 39.900, "v2": -37.300, "v3": 23.142, "v4": 1.733, "amplitude": 40.047, "phase_angle": 158.654, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.036, "frame": { "rmsd": 0.009, "origin": [ 145.075, 240.935, 190.839 ], "x_axis": [ -0.179, -0.022, 0.984 ], "y_axis": [ 0.089, 0.995, 0.038 ], "z_axis": [ -0.980, 0.094, -0.176 ], "quaternion": [ 0.640, -0.022, -0.766, -0.043 ] } }, { "index": 2025, "index_chain": 499, "chain_name": "A", "nt_resnum": 500, "nt_name": "C", "nt_code": "C", "nt_id": "///A/500", "linked_nts": [ "///A/499", "///A/501" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-stack,canonical,helix-end,multiplet", "alpha": -157.809, "beta": -149.537, "gamma": 150.529, "delta": 84.897, "epsilon": -100.109, "zeta": -100.033, "epsilon_zeta": -0.076, "bb_type": "--", "chi": -141.729, "glyco_bond": "anti", "C5prime_xyz": [ -1.576, 8.795, -0.585 ], "P_xyz": [ 0.083, 9.083, -2.608 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 175.716, "theta": -147.075, "eta_prime": -142.611, "theta_prime": -142.773, "eta_base": -121.691, "theta_base": -116.718, "v0": -2.159, "v1": -19.559, "v2": 32.341, "v3": -34.442, "v4": 23.157, "amplitude": 34.879, "phase_angle": 21.992, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.065, "frame": { "rmsd": 0.016, "origin": [ 139.291, 254.209, 183.126 ], "x_axis": [ 0.619, 0.753, 0.225 ], "y_axis": [ 0.785, -0.607, -0.128 ], "z_axis": [ 0.040, 0.256, -0.966 ], "quaternion": [ -0.107, 0.893, 0.430, 0.074 ] } }, { "index": 2026, "index_chain": 500, "chain_name": "A", "nt_resnum": 501, "nt_name": "C", "nt_code": "C", "nt_id": "///A/501", "linked_nts": [ "///A/500", "///A/502" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix", "alpha": -27.851, "beta": -152.936, "gamma": 71.097, "delta": 83.051, "epsilon": -120.414, "zeta": -72.778, "epsilon_zeta": -47.636, "bb_type": "--", "chi": -172.583, "glyco_bond": "anti", "C5prime_xyz": [ -1.126, 8.609, 1.272 ], "P_xyz": [ 1.311, 8.524, 2.210 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -107.070, "theta": -119.384, "eta_prime": -103.826, "theta_prime": -113.599, "eta_base": -113.459, "theta_base": -75.241, "v0": 0.974, "v1": -22.451, "v2": 34.185, "v3": -34.480, "v4": 21.213, "amplitude": 35.756, "phase_angle": 17.051, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.074, "frame": { "rmsd": 0.020, "origin": [ 151.094, 249.555, 171.991 ], "x_axis": [ 0.633, -0.015, 0.774 ], "y_axis": [ -0.774, 0.026, 0.633 ], "z_axis": [ -0.030, -1.000, 0.004 ], "quaternion": [ 0.645, 0.633, -0.311, 0.294 ] } }, { "index": 2027, "index_chain": 501, "chain_name": "A", "nt_resnum": 502, "nt_name": "U", "nt_code": "U", "nt_id": "///A/502", "linked_nts": [ "///A/501", "///A/503" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -64.517, "beta": 164.318, "gamma": 62.195, "delta": 86.914, "epsilon": -107.473, "zeta": -62.024, "epsilon_zeta": -45.449, "bb_type": "--", "chi": -167.954, "glyco_bond": "anti", "C5prime_xyz": [ -1.614, 8.705, 0.954 ], "P_xyz": [ 0.908, 9.134, 1.340 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.260, "theta": -97.474, "eta_prime": -163.101, "theta_prime": -90.940, "eta_base": -111.880, "theta_base": -48.115, "v0": -4.215, "v1": -16.960, "v2": 30.292, "v3": -33.563, "v4": 23.953, "amplitude": 33.604, "phase_angle": 25.652, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.507, "filter_rmsd": 0.106, "frame": { "rmsd": 0.022, "origin": [ 152.608, 245.463, 174.500 ], "x_axis": [ -0.127, 0.352, 0.927 ], "y_axis": [ -0.983, 0.078, -0.164 ], "z_axis": [ -0.130, -0.933, 0.336 ], "quaternion": [ 0.567, 0.339, -0.466, 0.589 ] } }, { "index": 2028, "index_chain": 502, "chain_name": "A", "nt_resnum": 503, "nt_name": "G", "nt_code": "G", "nt_id": "///A/503", "linked_nts": [ "///A/502", "///A/504" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -61.799, "beta": 145.782, "gamma": 78.196, "delta": 86.850, "epsilon": 178.303, "zeta": -178.482, "epsilon_zeta": -3.215, "bb_type": "--", "chi": -136.523, "glyco_bond": "anti", "C5prime_xyz": [ -3.335, 8.533, -0.960 ], "P_xyz": [ -1.357, 9.515, -2.346 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 159.363, "theta": 116.513, "eta_prime": -153.811, "theta_prime": 114.325, "eta_base": -92.761, "theta_base": 142.024, "v0": -21.384, "v1": 0.446, "v2": 18.835, "v3": -31.567, "v4": 33.501, "amplitude": 33.941, "phase_angle": 56.294, "puckering": "C4'-exo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.023, "filter_rmsd": 0.025, "frame": { "rmsd": 0.025, "origin": [ 149.600, 244.802, 178.766 ], "x_axis": [ -0.784, 0.415, 0.462 ], "y_axis": [ -0.621, -0.528, -0.580 ], "z_axis": [ 0.003, -0.741, 0.672 ], "quaternion": [ 0.300, 0.134, -0.382, 0.864 ] } }, { "index": 2029, "index_chain": 503, "chain_name": "A", "nt_resnum": 504, "nt_name": "A", "nt_code": "A", "nt_id": "///A/504", "linked_nts": [ "///A/503", "///A/505" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -10.489, "beta": 131.099, "gamma": 33.958, "delta": 80.248, "epsilon": -147.993, "zeta": -69.172, "epsilon_zeta": -78.820, "bb_type": "BI", "chi": -171.723, "glyco_bond": "anti", "C5prime_xyz": [ -1.414, 8.580, 1.206 ], "P_xyz": [ 1.141, 8.330, 1.700 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -173.601, "theta": -132.922, "eta_prime": -179.967, "theta_prime": -135.146, "eta_base": 179.437, "theta_base": -114.099, "v0": 1.137, "v1": -23.715, "v2": 36.013, "v3": -36.253, "v4": 22.169, "amplitude": 37.628, "phase_angle": 16.851, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.042, "frame": { "rmsd": 0.022, "origin": [ 156.675, 237.799, 177.309 ], "x_axis": [ -0.487, 0.473, 0.734 ], "y_axis": [ -0.850, -0.067, -0.522 ], "z_axis": [ -0.198, -0.879, 0.435 ], "quaternion": [ 0.469, 0.190, -0.497, 0.705 ] } }, { "index": 2030, "index_chain": 504, "chain_name": "A", "nt_resnum": 505, "nt_name": "A", "nt_code": "A", "nt_id": "///A/505", "linked_nts": [ "///A/504", "///A/506" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix,multiplet", "alpha": -85.132, "beta": -178.116, "gamma": 66.687, "delta": 78.290, "epsilon": -135.194, "zeta": -87.564, "epsilon_zeta": -47.630, "bb_type": "BI", "chi": -155.207, "glyco_bond": "anti", "C5prime_xyz": [ -1.418, 8.709, 0.174 ], "P_xyz": [ 1.124, 9.200, -0.144 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.176, "theta": -150.486, "eta_prime": 178.474, "theta_prime": -146.611, "eta_base": -143.197, "theta_base": -113.114, "v0": 3.603, "v1": -27.446, "v2": 39.528, "v3": -38.479, "v4": 21.984, "amplitude": 40.667, "phase_angle": 13.592, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.510, "filter_rmsd": 0.043, "frame": { "rmsd": 0.018, "origin": [ 157.023, 235.479, 180.087 ], "x_axis": [ -0.892, 0.292, 0.346 ], "y_axis": [ -0.447, -0.453, -0.771 ], "z_axis": [ -0.068, -0.842, 0.535 ], "quaternion": [ 0.218, 0.082, -0.475, 0.849 ] } }, { "index": 2031, "index_chain": 505, "chain_name": "A", "nt_resnum": 506, "nt_name": "A", "nt_code": "A", "nt_id": "///A/506", "linked_nts": [ "///A/505", "///A/507" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -59.936, "beta": 154.409, "gamma": 64.006, "delta": 82.825, "epsilon": -126.901, "zeta": -53.342, "epsilon_zeta": -73.559, "bb_type": "--", "chi": -158.322, "glyco_bond": "anti", "C5prime_xyz": [ -1.167, 8.586, 0.402 ], "P_xyz": [ 1.335, 8.631, -0.356 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 173.281, "theta": -103.968, "eta_prime": -173.902, "theta_prime": -104.183, "eta_base": -130.479, "theta_base": -66.065, "v0": 4.740, "v1": -26.646, "v2": 37.197, "v3": -35.464, "v4": 19.431, "amplitude": 37.973, "phase_angle": 11.605, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.589, "filter_rmsd": 0.042, "frame": { "rmsd": 0.019, "origin": [ 155.246, 233.133, 182.691 ], "x_axis": [ -0.965, 0.088, -0.249 ], "y_axis": [ 0.132, -0.656, -0.743 ], "z_axis": [ -0.229, -0.749, 0.621 ], "quaternion": [ -0.012, -0.133, -0.414, 0.900 ] } }, { "index": 2032, "index_chain": 506, "chain_name": "A", "nt_resnum": 507, "nt_name": "C", "nt_code": "C", "nt_id": "///A/507", "linked_nts": [ "///A/506", "///A/508" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -77.521, "beta": -175.298, "gamma": 56.466, "delta": 82.506, "epsilon": -148.613, "zeta": -73.547, "epsilon_zeta": -75.066, "bb_type": "BI", "chi": -157.923, "glyco_bond": "anti", "C5prime_xyz": [ -1.399, 8.773, 0.430 ], "P_xyz": [ 1.170, 9.186, 0.719 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 157.152, "theta": -143.663, "eta_prime": -173.714, "theta_prime": -141.400, "eta_base": -109.848, "theta_base": -112.490, "v0": 0.975, "v1": -22.978, "v2": 35.051, "v3": -35.316, "v4": 21.677, "amplitude": 36.658, "phase_angle": 17.028, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.566, "filter_rmsd": 0.070, "frame": { "rmsd": 0.020, "origin": [ 149.758, 230.033, 181.102 ], "x_axis": [ -0.060, -0.135, -0.989 ], "y_axis": [ 0.868, -0.496, 0.016 ], "z_axis": [ -0.492, -0.858, 0.147 ], "quaternion": [ -0.385, -0.568, -0.323, 0.652 ] } }, { "index": 2033, "index_chain": 507, "chain_name": "A", "nt_resnum": 508, "nt_name": "C", "nt_code": "C", "nt_id": "///A/508", "linked_nts": [ "///A/507", "///A/509" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -65.690, "beta": 167.283, "gamma": 65.985, "delta": 79.211, "epsilon": -133.172, "zeta": -100.259, "epsilon_zeta": -32.913, "bb_type": "--", "chi": -164.886, "glyco_bond": "anti", "C5prime_xyz": [ -1.349, 8.795, 0.843 ], "P_xyz": [ 1.226, 9.229, 0.826 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 176.525, "theta": -128.987, "eta_prime": -170.096, "theta_prime": -140.876, "eta_base": -129.207, "theta_base": -138.982, "v0": 0.282, "v1": -23.737, "v2": 36.856, "v3": -37.593, "v4": 23.587, "amplitude": 38.783, "phase_angle": 18.139, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.715, "filter_rmsd": 0.067, "frame": { "rmsd": 0.017, "origin": [ 146.869, 226.796, 180.071 ], "x_axis": [ 0.525, -0.265, -0.809 ], "y_axis": [ 0.755, -0.295, 0.586 ], "z_axis": [ -0.394, -0.918, 0.045 ], "quaternion": [ 0.564, 0.666, 0.184, -0.452 ] } }, { "index": 2034, "index_chain": 508, "chain_name": "A", "nt_resnum": 509, "nt_name": "G", "nt_code": "G", "nt_id": "///A/509", "linked_nts": [ "///A/508", "///A/510" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 102.513, "beta": -132.154, "gamma": -139.201, "delta": 81.542, "epsilon": -124.106, "zeta": -85.717, "epsilon_zeta": -38.389, "bb_type": "--", "chi": -179.485, "glyco_bond": "anti", "C5prime_xyz": [ -1.277, 8.438, 1.687 ], "P_xyz": [ -0.382, 10.687, 0.715 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 177.312, "theta": 178.752, "eta_prime": -176.729, "theta_prime": -168.954, "eta_base": -157.093, "theta_base": -139.350, "v0": 2.327, "v1": -24.522, "v2": 36.257, "v3": -35.824, "v4": 21.186, "amplitude": 37.558, "phase_angle": 15.125, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 143.499, 224.626, 178.503 ], "x_axis": [ 0.717, -0.282, -0.638 ], "y_axis": [ 0.582, -0.261, 0.770 ], "z_axis": [ -0.384, -0.923, -0.023 ], "quaternion": [ 0.598, 0.707, 0.106, -0.361 ] } }, { "index": 2035, "index_chain": 509, "chain_name": "A", "nt_resnum": 510, "nt_name": "U", "nt_code": "U", "nt_id": "///A/510", "linked_nts": [ "///A/509", "///A/511" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -59.368, "beta": 164.096, "gamma": 52.225, "delta": 80.099, "epsilon": -162.517, "zeta": -88.648, "epsilon_zeta": -73.869, "bb_type": "BI", "chi": -157.566, "glyco_bond": "anti", "C5prime_xyz": [ -1.591, 8.774, 0.378 ], "P_xyz": [ 0.957, 9.311, 0.366 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 160.134, "theta": -134.004, "eta_prime": 177.338, "theta_prime": -141.990, "eta_base": -145.330, "theta_base": -118.199, "v0": -0.378, "v1": -22.783, "v2": 35.989, "v3": -37.171, "v4": 23.662, "amplitude": 38.093, "phase_angle": 19.134, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.597, "filter_rmsd": 0.105, "frame": { "rmsd": 0.012, "origin": [ 141.757, 222.122, 176.814 ], "x_axis": [ 0.937, -0.323, -0.133 ], "y_axis": [ 0.068, -0.205, 0.976 ], "z_axis": [ -0.343, -0.924, -0.170 ], "quaternion": [ 0.625, 0.760, -0.084, -0.156 ] } }, { "index": 2036, "index_chain": 510, "chain_name": "A", "nt_resnum": 511, "nt_name": "A", "nt_code": "A", "nt_id": "///A/511", "linked_nts": [ "///A/510", "///A/512" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": 166.483, "beta": -146.630, "gamma": 158.094, "delta": 81.088, "epsilon": -121.766, "zeta": -89.348, "epsilon_zeta": -32.418, "bb_type": "--", "chi": 179.895, "glyco_bond": "anti", "C5prime_xyz": [ -1.612, 8.429, 1.698 ], "P_xyz": [ 0.584, 9.594, 0.917 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.461, "theta": -150.428, "eta_prime": 175.264, "theta_prime": -149.696, "eta_base": -143.762, "theta_base": -117.606, "v0": 0.537, "v1": -22.438, "v2": 34.657, "v3": -35.312, "v4": 21.897, "amplitude": 36.398, "phase_angle": 17.794, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.243, "filter_rmsd": 0.045, "frame": { "rmsd": 0.014, "origin": [ 141.836, 218.958, 174.687 ], "x_axis": [ 0.887, -0.071, 0.457 ], "y_axis": [ -0.460, -0.035, 0.887 ], "z_axis": [ -0.047, -0.997, -0.064 ], "quaternion": [ 0.668, 0.705, -0.189, 0.145 ] } }, { "index": 2037, "index_chain": 511, "chain_name": "A", "nt_resnum": 512, "nt_name": "U", "nt_code": "U", "nt_id": "///A/512", "linked_nts": [ "///A/511", "///A/513" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -53.480, "beta": 153.171, "gamma": 52.932, "delta": 77.508, "epsilon": -133.357, "zeta": -81.333, "epsilon_zeta": -52.024, "bb_type": "BI", "chi": -160.999, "glyco_bond": "anti", "C5prime_xyz": [ -1.591, 8.779, 0.552 ], "P_xyz": [ 0.973, 9.245, 0.287 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.556, "theta": -145.170, "eta_prime": 178.541, "theta_prime": -147.329, "eta_base": -134.509, "theta_base": -129.542, "v0": 0.695, "v1": -24.443, "v2": 37.672, "v3": -38.173, "v4": 23.619, "amplitude": 39.509, "phase_angle": 17.544, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.436, "filter_rmsd": 0.104, "frame": { "rmsd": 0.011, "origin": [ 143.227, 215.861, 173.907 ], "x_axis": [ 0.431, -0.123, 0.894 ], "y_axis": [ -0.901, -0.114, 0.419 ], "z_axis": [ 0.051, -0.986, -0.160 ], "quaternion": [ 0.538, 0.653, -0.392, 0.362 ] } }, { "index": 2038, "index_chain": 512, "chain_name": "A", "nt_resnum": 513, "nt_name": "G", "nt_code": "G", "nt_id": "///A/513", "linked_nts": [ "///A/512", "///A/514" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem", "alpha": -87.520, "beta": 155.787, "gamma": 83.895, "delta": 77.434, "epsilon": -122.233, "zeta": -90.320, "epsilon_zeta": -31.912, "bb_type": "--", "chi": -168.296, "glyco_bond": "anti", "C5prime_xyz": [ -1.525, 8.746, 0.972 ], "P_xyz": [ 0.828, 9.488, 0.122 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.436, "theta": -147.228, "eta_prime": 175.412, "theta_prime": -147.022, "eta_base": -154.141, "theta_base": -111.255, "v0": -0.354, "v1": -24.076, "v2": 38.004, "v3": -39.172, "v4": 24.967, "amplitude": 40.209, "phase_angle": 19.063, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.015, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 145.060, 212.527, 173.518 ], "x_axis": [ -0.047, 0.088, 0.995 ], "y_axis": [ -0.987, -0.156, -0.033 ], "z_axis": [ 0.153, -0.984, 0.094 ], "quaternion": [ 0.472, 0.504, -0.446, 0.569 ] } }, { "index": 2039, "index_chain": 513, "chain_name": "A", "nt_resnum": 514, "nt_name": "C", "nt_code": "C", "nt_id": "///A/514", "linked_nts": [ "///A/513", "///A/515" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -68.640, "beta": 156.527, "gamma": 58.932, "delta": 79.633, "epsilon": -150.827, "zeta": -77.215, "epsilon_zeta": -73.612, "bb_type": "BI", "chi": -163.684, "glyco_bond": "anti", "C5prime_xyz": [ -1.299, 8.707, 0.718 ], "P_xyz": [ 1.273, 8.899, 0.299 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 154.427, "theta": -147.812, "eta_prime": 170.576, "theta_prime": -150.549, "eta_base": -136.287, "theta_base": -133.125, "v0": 4.313, "v1": -28.152, "v2": 39.975, "v3": -38.360, "v4": 21.442, "amplitude": 40.950, "phase_angle": 12.527, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.466, "filter_rmsd": 0.075, "frame": { "rmsd": 0.020, "origin": [ 145.850, 209.664, 175.577 ], "x_axis": [ -0.700, 0.238, 0.674 ], "y_axis": [ -0.710, -0.340, -0.617 ], "z_axis": [ 0.082, -0.910, 0.407 ], "quaternion": [ 0.303, 0.242, -0.488, 0.782 ] } }, { "index": 2040, "index_chain": 514, "chain_name": "A", "nt_resnum": 515, "nt_name": "G", "nt_code": "G", "nt_id": "///A/515", "linked_nts": [ "///A/514", "///A/516" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -61.340, "beta": 175.360, "gamma": 53.686, "delta": 79.014, "epsilon": -163.473, "zeta": -87.872, "epsilon_zeta": -75.601, "bb_type": "BI", "chi": -161.619, "glyco_bond": "anti", "C5prime_xyz": [ -1.085, 8.714, 0.643 ], "P_xyz": [ 1.514, 8.997, 0.837 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.289, "theta": -137.306, "eta_prime": -178.282, "theta_prime": -140.401, "eta_base": -145.133, "theta_base": -120.667, "v0": 3.069, "v1": -25.870, "v2": 37.765, "v3": -36.929, "v4": 21.394, "amplitude": 38.953, "phase_angle": 14.188, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.955, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 146.932, 207.261, 178.352 ], "x_axis": [ -0.967, 0.163, 0.197 ], "y_axis": [ -0.252, -0.467, -0.848 ], "z_axis": [ -0.046, -0.869, 0.493 ], "quaternion": [ 0.121, 0.044, -0.502, 0.855 ] } }, { "index": 2041, "index_chain": 515, "chain_name": "A", "nt_resnum": 516, "nt_name": "U", "nt_code": "U", "nt_id": "///A/516", "linked_nts": [ "///A/515", "///A/517" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 169.946, "beta": -143.166, "gamma": 156.741, "delta": 78.531, "epsilon": -116.621, "zeta": -98.222, "epsilon_zeta": -18.399, "bb_type": "--", "chi": -167.692, "glyco_bond": "anti", "C5prime_xyz": [ -1.320, 8.586, 1.017 ], "P_xyz": [ 0.657, 9.431, -0.455 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 165.162, "theta": -162.157, "eta_prime": -179.397, "theta_prime": -152.184, "eta_base": -143.969, "theta_base": -144.788, "v0": 4.583, "v1": -27.629, "v2": 39.116, "v3": -37.472, "v4": 20.629, "amplitude": 40.011, "phase_angle": 12.137, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.177, "filter_rmsd": 0.110, "frame": { "rmsd": 0.015, "origin": [ 146.299, 205.535, 181.439 ], "x_axis": [ -0.976, -0.085, -0.198 ], "y_axis": [ 0.205, -0.651, -0.731 ], "z_axis": [ -0.066, -0.754, 0.653 ], "quaternion": [ -0.080, -0.073, -0.410, 0.906 ] } }, { "index": 2042, "index_chain": 516, "chain_name": "A", "nt_resnum": 517, "nt_name": "A", "nt_code": "A", "nt_id": "///A/517", "linked_nts": [ "///A/516", "///A/518" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -53.685, "beta": -152.843, "gamma": 49.328, "delta": 84.158, "epsilon": -140.820, "zeta": 174.551, "epsilon_zeta": 44.629, "bb_type": "--", "chi": -115.967, "glyco_bond": "anti", "C5prime_xyz": [ -2.266, 8.289, -1.904 ], "P_xyz": [ 0.011, 9.534, -2.211 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -155.073, "theta": 95.853, "eta_prime": -163.171, "theta_prime": 124.196, "eta_base": -167.035, "theta_base": 164.806, "v0": -6.846, "v1": -14.182, "v2": 28.400, "v3": -33.104, "v4": 25.262, "amplitude": 32.885, "phase_angle": 30.277, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1m", "suiteness": 0.259, "filter_rmsd": 0.041, "frame": { "rmsd": 0.017, "origin": [ 145.306, 200.397, 187.723 ], "x_axis": [ -0.876, -0.043, -0.481 ], "y_axis": [ 0.438, -0.491, -0.753 ], "z_axis": [ -0.204, -0.870, 0.449 ], "quaternion": [ -0.143, -0.204, -0.484, 0.839 ] } }, { "index": 2043, "index_chain": 517, "chain_name": "A", "nt_resnum": 518, "nt_name": "C", "nt_code": "C", "nt_id": "///A/518", "linked_nts": [ "///A/517", "///A/519" ], "nt_type": "RNA", "dbn": ".", "summary": "turn", "alpha": -52.691, "beta": -162.319, "gamma": 57.324, "delta": 139.176, "epsilon": -95.733, "zeta": 76.797, "epsilon_zeta": 187.470, "bb_type": "--", "chi": 24.840, "glyco_bond": "--", "C5prime_xyz": [ -5.826, 5.078, -0.178 ], "P_xyz": [ -6.782, 3.559, -2.084 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -101.741, "theta": 111.908, "eta_prime": -120.282, "theta_prime": 92.780, "eta_base": -165.396, "theta_base": 121.864, "v0": -30.441, "v1": 40.366, "v2": -34.314, "v3": 17.731, "v4": 7.641, "amplitude": 39.581, "phase_angle": 150.104, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "3b", "suiteness": 0.563, "filter_rmsd": 0.074, "frame": { "rmsd": 0.020, "origin": [ 154.404, 189.359, 188.252 ], "x_axis": [ 0.378, -0.884, 0.276 ], "y_axis": [ 0.318, -0.156, -0.935 ], "z_axis": [ 0.869, 0.441, 0.222 ], "quaternion": [ 0.601, -0.573, 0.247, -0.500 ] } }, { "index": 2044, "index_chain": 518, "chain_name": "A", "nt_resnum": 519, "nt_name": "A", "nt_code": "A", "nt_id": "///A/519", "linked_nts": [ "///A/518", "///A/520" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI", "alpha": 130.281, "beta": -146.486, "gamma": 127.079, "delta": 86.120, "epsilon": -155.616, "zeta": -75.181, "epsilon_zeta": -80.436, "bb_type": "BI", "chi": -119.158, "glyco_bond": "anti", "C5prime_xyz": [ -1.574, 8.073, -1.780 ], "P_xyz": [ 0.216, 7.234, -3.511 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 134.626, "theta": -154.428, "eta_prime": 142.106, "theta_prime": -168.421, "eta_base": -175.704, "theta_base": 165.560, "v0": 9.401, "v1": -28.686, "v2": 36.050, "v3": -31.515, "v4": 14.065, "amplitude": 36.133, "phase_angle": 3.864, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.049, "frame": { "rmsd": 0.040, "origin": [ 158.593, 191.540, 185.396 ], "x_axis": [ 0.135, -0.980, -0.148 ], "y_axis": [ 0.011, 0.151, -0.989 ], "z_axis": [ 0.991, 0.132, 0.031 ], "quaternion": [ 0.574, -0.488, 0.496, -0.432 ] } }, { "index": 2045, "index_chain": 519, "chain_name": "A", "nt_resnum": 520, "nt_name": "A", "nt_code": "A", "nt_id": "///A/520", "linked_nts": [ "///A/519", "///A/521" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end", "alpha": -137.769, "beta": 132.849, "gamma": 176.064, "delta": 147.346, "epsilon": -72.834, "zeta": -134.659, "epsilon_zeta": 61.825, "bb_type": "--", "chi": -105.994, "glyco_bond": "anti", "C5prime_xyz": [ -2.321, 8.211, -1.845 ], "P_xyz": [ -2.170, 8.965, -4.344 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -97.232, "theta": 175.622, "eta_prime": -123.499, "theta_prime": -160.998, "eta_base": -158.316, "theta_base": -109.115, "v0": -23.276, "v1": 37.566, "v2": -36.740, "v3": 24.251, "v4": -0.858, "amplitude": 38.531, "phase_angle": 162.462, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.045, "frame": { "rmsd": 0.015, "origin": [ 164.874, 196.242, 186.232 ], "x_axis": [ 0.246, -0.933, 0.263 ], "y_axis": [ 0.105, -0.244, -0.964 ], "z_axis": [ 0.964, 0.264, 0.038 ], "quaternion": [ 0.510, -0.602, 0.343, -0.509 ] } }, { "index": 2046, "index_chain": 520, "chain_name": "A", "nt_resnum": 521, "nt_name": "G", "nt_code": "G", "nt_id": "///A/521", "linked_nts": [ "///A/520", "///A/522" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-stack", "alpha": -99.796, "beta": 148.449, "gamma": 61.322, "delta": 86.860, "epsilon": -146.103, "zeta": -160.925, "epsilon_zeta": 14.822, "bb_type": "--", "chi": -94.235, "glyco_bond": "anti", "C5prime_xyz": [ -2.167, 7.431, -2.846 ], "P_xyz": [ -0.325, 6.302, -4.330 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 151.628, "theta": 161.521, "eta_prime": 177.994, "theta_prime": 159.350, "eta_base": -140.200, "theta_base": 134.098, "v0": 4.492, "v1": -24.413, "v2": 33.892, "v3": -32.187, "v4": 17.531, "amplitude": 34.560, "phase_angle": 11.284, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.024, "frame": { "rmsd": 0.024, "origin": [ 170.945, 197.112, 179.547 ], "x_axis": [ 0.035, -0.660, -0.751 ], "y_axis": [ -0.429, 0.668, -0.607 ], "z_axis": [ 0.902, 0.343, -0.260 ], "quaternion": [ 0.601, -0.396, 0.688, -0.096 ] } }, { "index": 2047, "index_chain": 521, "chain_name": "A", "nt_resnum": 522, "nt_name": "C", "nt_code": "C", "nt_id": "///A/522", "linked_nts": [ "///A/521", "///A/523" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,canonical,helix", "alpha": 57.811, "beta": 172.812, "gamma": -81.359, "delta": 150.464, "epsilon": -110.099, "zeta": 77.657, "epsilon_zeta": 172.245, "bb_type": "--", "chi": -94.663, "glyco_bond": "anti", "C5prime_xyz": [ -2.577, 7.890, -2.296 ], "P_xyz": [ -2.629, 10.169, -3.590 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -158.047, "theta": 70.135, "eta_prime": 177.661, "theta_prime": 53.725, "eta_base": 156.714, "theta_base": 36.915, "v0": -23.225, "v1": 38.460, "v2": -38.099, "v3": 25.692, "v4": -1.752, "amplitude": 39.690, "phase_angle": 163.721, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32m", "cluster": "7r", "suiteness": 0.010, "filter_rmsd": 0.059, "frame": { "rmsd": 0.016, "origin": [ 172.789, 213.448, 178.369 ], "x_axis": [ 0.787, -0.418, 0.453 ], "y_axis": [ -0.132, -0.832, -0.539 ], "z_axis": [ 0.602, 0.365, -0.710 ], "quaternion": [ -0.248, 0.912, -0.151, 0.289 ] } }, { "index": 2048, "index_chain": 522, "chain_name": "A", "nt_resnum": 523, "nt_name": "A", "nt_code": "A", "nt_id": "///A/523", "linked_nts": [ "///A/522", "///A/524" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,syn,non-stack,non-canonical,multiplet", "alpha": 79.336, "beta": 172.386, "gamma": -177.769, "delta": 143.657, "epsilon": -128.255, "zeta": 57.052, "epsilon_zeta": 174.693, "bb_type": "--", "chi": 74.773, "glyco_bond": "syn", "C5prime_xyz": [ -5.201, 4.816, 1.852 ], "P_xyz": [ -5.795, 3.940, 4.231 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 152.451, "theta": 27.812, "eta_prime": 141.602, "theta_prime": 27.111, "eta_base": 132.089, "theta_base": 44.731, "v0": -24.454, "v1": 36.510, "v2": -33.841, "v3": 20.654, "v4": 2.230, "amplitude": 36.555, "phase_angle": 157.783, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.048, "frame": { "rmsd": 0.019, "origin": [ 166.830, 208.951, 178.806 ], "x_axis": [ -0.089, -0.756, 0.648 ], "y_axis": [ -0.696, -0.418, -0.584 ], "z_axis": [ 0.713, -0.503, -0.489 ], "quaternion": [ -0.030, 0.674, -0.538, 0.505 ] } }, { "index": 2049, "index_chain": 523, "chain_name": "A", "nt_resnum": 524, "nt_name": "G", "nt_code": "G", "nt_id": "///A/524", "linked_nts": [ "///A/523", "///A/525" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": 115.246, "beta": -147.210, "gamma": 162.115, "delta": 84.592, "epsilon": -145.327, "zeta": -67.277, "epsilon_zeta": -78.050, "bb_type": "BI", "chi": -162.547, "glyco_bond": "anti", "C5prime_xyz": [ -1.050, 8.628, 0.678 ], "P_xyz": [ 0.768, 9.372, -1.040 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 148.151, "theta": -147.986, "eta_prime": 166.261, "theta_prime": -150.720, "eta_base": -152.066, "theta_base": -116.723, "v0": 5.020, "v1": -26.321, "v2": 36.332, "v3": -34.409, "v4": 18.686, "amplitude": 37.013, "phase_angle": 11.009, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.019, "frame": { "rmsd": 0.019, "origin": [ 165.287, 203.569, 167.290 ], "x_axis": [ -0.653, -0.577, 0.491 ], "y_axis": [ -0.504, 0.814, 0.287 ], "z_axis": [ -0.565, -0.060, -0.823 ], "quaternion": [ -0.291, -0.298, 0.907, 0.062 ] } }, { "index": 2050, "index_chain": 524, "chain_name": "A", "nt_resnum": 525, "nt_name": "U", "nt_code": "U", "nt_id": "///A/525", "linked_nts": [ "///A/524", "///A/526" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -81.779, "beta": 170.326, "gamma": 69.644, "delta": 84.162, "epsilon": -148.582, "zeta": -74.153, "epsilon_zeta": -74.429, "bb_type": "BI", "chi": -151.956, "glyco_bond": "anti", "C5prime_xyz": [ -1.547, 8.710, 0.034 ], "P_xyz": [ 1.006, 9.049, -0.504 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.630, "theta": -140.475, "eta_prime": -175.752, "theta_prime": -147.141, "eta_base": -123.433, "theta_base": -134.316, "v0": 2.261, "v1": -23.855, "v2": 35.146, "v3": -34.685, "v4": 20.499, "amplitude": 36.393, "phase_angle": 15.042, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.473, "filter_rmsd": 0.104, "frame": { "rmsd": 0.015, "origin": [ 162.860, 202.053, 165.607 ], "x_axis": [ -0.812, 0.025, 0.584 ], "y_axis": [ -0.150, 0.957, -0.250 ], "z_axis": [ -0.565, -0.290, -0.773 ], "quaternion": [ -0.305, -0.033, 0.941, -0.144 ] } }, { "index": 2051, "index_chain": 525, "chain_name": "A", "nt_resnum": 526, "nt_name": "G", "nt_code": "G", "nt_id": "///A/526", "linked_nts": [ "///A/525", "///A/527" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -95.949, "beta": -176.637, "gamma": 62.266, "delta": 76.126, "epsilon": -145.551, "zeta": -75.532, "epsilon_zeta": -70.019, "bb_type": "BI", "chi": -161.924, "glyco_bond": "anti", "C5prime_xyz": [ -1.398, 8.783, 0.565 ], "P_xyz": [ 1.143, 9.392, 0.560 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 150.351, "theta": -149.549, "eta_prime": 158.798, "theta_prime": -146.423, "eta_base": -171.488, "theta_base": -116.135, "v0": 1.450, "v1": -26.177, "v2": 39.616, "v3": -39.729, "v4": 24.120, "amplitude": 41.327, "phase_angle": 16.545, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.289, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 160.567, 199.871, 163.465 ], "x_axis": [ -0.392, 0.584, 0.711 ], "y_axis": [ 0.212, 0.809, -0.549 ], "z_axis": [ -0.895, -0.064, -0.440 ], "quaternion": [ -0.494, 0.245, 0.813, -0.189 ] } }, { "index": 2052, "index_chain": 526, "chain_name": "A", "nt_resnum": 527, "nt_name": "G", "nt_code": "G", "nt_id": "///A/527", "linked_nts": [ "///A/526", "///A/528" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -64.055, "beta": 166.487, "gamma": 63.676, "delta": 79.814, "epsilon": -140.186, "zeta": -58.159, "epsilon_zeta": -82.027, "bb_type": "BI", "chi": -167.672, "glyco_bond": "anti", "C5prime_xyz": [ -1.382, 8.725, 0.908 ], "P_xyz": [ 1.201, 9.153, 0.838 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.687, "theta": -124.954, "eta_prime": -174.570, "theta_prime": -122.543, "eta_base": -131.408, "theta_base": -73.868, "v0": 0.814, "v1": -23.981, "v2": 36.746, "v3": -37.170, "v4": 22.927, "amplitude": 38.495, "phase_angle": 17.336, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.766, "filter_rmsd": 0.018, "frame": { "rmsd": 0.018, "origin": [ 156.700, 199.687, 163.899 ], "x_axis": [ -0.033, 0.936, 0.350 ], "y_axis": [ 0.335, 0.340, -0.879 ], "z_axis": [ -0.942, 0.088, -0.325 ], "quaternion": [ -0.496, 0.488, 0.652, -0.303 ] } }, { "index": 2053, "index_chain": 527, "chain_name": "A", "nt_resnum": 528, "nt_name": "G", "nt_code": "G", "nt_id": "///A/528", "linked_nts": [ "///A/527", "///A/529" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -76.622, "beta": 168.323, "gamma": 71.725, "delta": 78.245, "epsilon": -146.001, "zeta": -121.078, "epsilon_zeta": -24.924, "bb_type": "--", "chi": -154.297, "glyco_bond": "anti", "C5prime_xyz": [ -1.238, 8.729, 0.167 ], "P_xyz": [ 1.243, 9.028, -0.636 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.524, "theta": 168.734, "eta_prime": -168.729, "theta_prime": 168.918, "eta_base": -95.279, "theta_base": 163.959, "v0": 5.532, "v1": -28.427, "v2": 39.518, "v3": -37.275, "v4": 20.009, "amplitude": 40.238, "phase_angle": 10.856, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.417, "filter_rmsd": 0.020, "frame": { "rmsd": 0.020, "origin": [ 154.009, 203.855, 163.464 ], "x_axis": [ 0.083, 0.828, -0.555 ], "y_axis": [ 0.011, -0.558, -0.830 ], "z_axis": [ -0.996, 0.063, -0.056 ], "quaternion": [ -0.343, 0.651, 0.322, -0.595 ] } }, { "index": 2054, "index_chain": 528, "chain_name": "A", "nt_resnum": 529, "nt_name": "A", "nt_code": "A", "nt_id": "///A/529", "linked_nts": [ "///A/528", "///A/530" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -54.912, "beta": 149.285, "gamma": 63.092, "delta": 74.784, "epsilon": -127.166, "zeta": -73.206, "epsilon_zeta": -53.960, "bb_type": "BI", "chi": -164.312, "glyco_bond": "anti", "C5prime_xyz": [ -1.809, 8.751, 0.726 ], "P_xyz": [ 0.619, 9.453, 0.153 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -178.029, "theta": -131.599, "eta_prime": 174.355, "theta_prime": -128.917, "eta_base": 161.766, "theta_base": -82.997, "v0": -1.266, "v1": -24.098, "v2": 38.984, "v3": -40.780, "v4": 26.499, "amplitude": 41.573, "phase_angle": 20.328, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "7a", "suiteness": 0.501, "filter_rmsd": 0.042, "frame": { "rmsd": 0.014, "origin": [ 148.265, 199.955, 167.357 ], "x_axis": [ 0.224, 0.953, -0.204 ], "y_axis": [ 0.151, -0.241, -0.959 ], "z_axis": [ -0.963, 0.184, -0.198 ], "quaternion": [ -0.443, 0.645, 0.428, -0.452 ] } }, { "index": 2055, "index_chain": 529, "chain_name": "A", "nt_resnum": 530, "nt_name": "G", "nt_code": "G", "nt_id": "///A/530", "linked_nts": [ "///A/529", "///A/531" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -59.302, "beta": 155.392, "gamma": 65.538, "delta": 78.892, "epsilon": -141.876, "zeta": -77.893, "epsilon_zeta": -63.983, "bb_type": "BI", "chi": -163.575, "glyco_bond": "anti", "C5prime_xyz": [ -1.519, 8.757, 0.707 ], "P_xyz": [ 1.007, 9.214, 0.218 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 166.115, "theta": -144.179, "eta_prime": -169.644, "theta_prime": -144.889, "eta_base": -102.485, "theta_base": -111.547, "v0": 1.556, "v1": -25.026, "v2": 37.775, "v3": -37.831, "v4": 22.914, "amplitude": 39.372, "phase_angle": 16.375, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.521, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 146.409, 204.093, 165.037 ], "x_axis": [ 0.373, 0.348, -0.860 ], "y_axis": [ -0.225, -0.865, -0.448 ], "z_axis": [ -0.900, 0.361, -0.244 ], "quaternion": [ -0.256, 0.788, 0.039, -0.559 ] } }, { "index": 2056, "index_chain": 530, "chain_name": "A", "nt_resnum": 531, "nt_name": "C", "nt_code": "C", "nt_id": "///A/531", "linked_nts": [ "///A/530", "///A/532" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -60.327, "beta": 162.640, "gamma": 59.205, "delta": 79.803, "epsilon": -148.563, "zeta": -69.488, "epsilon_zeta": -79.075, "bb_type": "BI", "chi": -162.676, "glyco_bond": "anti", "C5prime_xyz": [ -1.324, 8.763, 0.681 ], "P_xyz": [ 1.264, 9.069, 0.513 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.014, "theta": -141.120, "eta_prime": -175.603, "theta_prime": -142.711, "eta_base": -124.372, "theta_base": -121.708, "v0": 2.436, "v1": -25.784, "v2": 38.035, "v3": -37.478, "v4": 22.097, "amplitude": 39.376, "phase_angle": 14.995, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.870, "filter_rmsd": 0.071, "frame": { "rmsd": 0.015, "origin": [ 144.225, 206.538, 163.037 ], "x_axis": [ 0.218, -0.293, -0.931 ], "y_axis": [ -0.478, -0.864, 0.160 ], "z_axis": [ -0.851, 0.410, -0.329 ], "quaternion": [ -0.081, 0.776, -0.248, -0.574 ] } }, { "index": 2057, "index_chain": 531, "chain_name": "A", "nt_resnum": 532, "nt_name": "C", "nt_code": "C", "nt_id": "///A/532", "linked_nts": [ "///A/531", "///A/533" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -70.402, "beta": 172.667, "gamma": 63.438, "delta": 77.530, "epsilon": -136.080, "zeta": -84.901, "epsilon_zeta": -51.179, "bb_type": "BI", "chi": -160.030, "glyco_bond": "anti", "C5prime_xyz": [ -1.541, 8.865, 0.505 ], "P_xyz": [ 0.991, 9.524, 0.376 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 171.529, "theta": -150.918, "eta_prime": -175.801, "theta_prime": -149.538, "eta_base": -139.866, "theta_base": -129.002, "v0": -1.303, "v1": -22.651, "v2": 36.691, "v3": -38.377, "v4": 25.022, "amplitude": 39.152, "phase_angle": 20.424, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.799, "filter_rmsd": 0.065, "frame": { "rmsd": 0.010, "origin": [ 142.387, 208.926, 160.645 ], "x_axis": [ 0.012, -0.725, -0.689 ], "y_axis": [ -0.598, -0.558, 0.576 ], "z_axis": [ -0.801, 0.405, -0.440 ], "quaternion": [ 0.060, 0.709, -0.467, -0.526 ] } }, { "index": 2058, "index_chain": 532, "chain_name": "A", "nt_resnum": 533, "nt_name": "U", "nt_code": "U", "nt_id": "///A/533", "linked_nts": [ "///A/532", "///A/534" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,non-canonical,helix,stem-end,multiplet", "alpha": -65.377, "beta": 154.290, "gamma": 67.229, "delta": 78.655, "epsilon": -134.210, "zeta": -81.926, "epsilon_zeta": -52.284, "bb_type": "BI", "chi": -157.402, "glyco_bond": "anti", "C5prime_xyz": [ -1.707, 8.829, 0.325 ], "P_xyz": [ 0.739, 9.430, -0.386 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 167.600, "theta": -146.663, "eta_prime": -179.965, "theta_prime": -149.145, "eta_base": -148.312, "theta_base": -106.051, "v0": -1.282, "v1": -22.515, "v2": 36.353, "v3": -37.993, "v4": 24.740, "amplitude": 38.774, "phase_angle": 20.351, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.536, "filter_rmsd": 0.104, "frame": { "rmsd": 0.009, "origin": [ 140.661, 210.324, 158.099 ], "x_axis": [ -0.150, -0.940, -0.308 ], "y_axis": [ -0.690, -0.124, 0.713 ], "z_axis": [ -0.708, 0.319, -0.630 ], "quaternion": [ -0.155, -0.633, 0.643, 0.401 ] } }, { "index": 2059, "index_chain": 533, "chain_name": "A", "nt_resnum": 534, "nt_name": "A", "nt_code": "A", "nt_id": "///A/534", "linked_nts": [ "///A/533", "///A/535" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix-end", "alpha": -81.276, "beta": 151.487, "gamma": 76.373, "delta": 80.338, "epsilon": -141.223, "zeta": -104.892, "epsilon_zeta": -36.330, "bb_type": "BI", "chi": -164.980, "glyco_bond": "anti", "C5prime_xyz": [ -0.805, 8.556, 0.791 ], "P_xyz": [ 1.621, 8.605, -0.223 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 156.414, "theta": -117.031, "eta_prime": 173.597, "theta_prime": -119.688, "eta_base": -124.237, "theta_base": -72.006, "v0": 6.734, "v1": -28.960, "v2": 39.034, "v3": -36.026, "v4": 18.553, "amplitude": 39.513, "phase_angle": 8.934, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.188, "filter_rmsd": 0.052, "frame": { "rmsd": 0.027, "origin": [ 137.942, 209.473, 155.734 ], "x_axis": [ -0.486, -0.800, 0.352 ], "y_axis": [ -0.531, 0.590, 0.608 ], "z_axis": [ -0.694, 0.109, -0.712 ], "quaternion": [ -0.313, -0.399, 0.835, 0.215 ] } }, { "index": 2060, "index_chain": 534, "chain_name": "A", "nt_resnum": 535, "nt_name": "C", "nt_code": "C", "nt_id": "///A/535", "linked_nts": [ "///A/534", "///A/536" ], "nt_type": "RNA", "dbn": ".", "summary": "", "alpha": 125.490, "beta": -85.841, "gamma": -147.148, "delta": 76.938, "epsilon": -176.090, "zeta": 35.919, "epsilon_zeta": 147.991, "bb_type": "--", "chi": -50.620, "glyco_bond": "--", "C5prime_xyz": [ -4.980, 6.197, -2.392 ], "P_xyz": [ -6.876, 4.505, -1.613 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -115.587, "theta": -132.368, "eta_prime": -115.307, "theta_prime": -93.025, "eta_base": -48.063, "theta_base": -63.278, "v0": -18.015, "v1": -7.860, "v2": 28.716, "v3": -39.967, "v4": 36.543, "amplitude": 40.219, "phase_angle": 44.440, "puckering": "C4'-exo", "sugar_class": "--", "bin": "33t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.071, "frame": { "rmsd": 0.016, "origin": [ 132.916, 207.510, 156.239 ], "x_axis": [ 0.277, -0.818, -0.503 ], "y_axis": [ 0.537, 0.567, -0.625 ], "z_axis": [ 0.797, -0.097, 0.596 ], "quaternion": [ 0.781, -0.169, 0.416, -0.434 ] } }, { "index": 2061, "index_chain": 535, "chain_name": "A", "nt_resnum": 536, "nt_name": "U", "nt_code": "U", "nt_id": "///A/536", "linked_nts": [ "///A/535", "///A/537" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": -121.142, "beta": 155.734, "gamma": 113.555, "delta": 149.765, "epsilon": -154.734, "zeta": 152.752, "epsilon_zeta": 52.514, "bb_type": "--", "chi": -120.358, "glyco_bond": "anti", "C5prime_xyz": [ -1.759, 8.454, -1.141 ], "P_xyz": [ 0.554, 8.400, -2.397 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 174.605, "theta": 153.616, "eta_prime": -97.038, "theta_prime": 98.718, "eta_base": -69.191, "theta_base": 79.659, "v0": -18.362, "v1": 34.007, "v2": -35.793, "v3": 26.157, "v4": -5.101, "amplitude": 36.444, "phase_angle": 169.151, "puckering": "C2'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.103, "frame": { "rmsd": 0.006, "origin": [ 127.873, 215.510, 148.890 ], "x_axis": [ 0.129, 0.991, -0.047 ], "y_axis": [ 0.985, -0.134, -0.111 ], "z_axis": [ -0.116, -0.032, -0.993 ], "quaternion": [ -0.026, 0.751, 0.658, -0.054 ] } }, { "index": 2062, "index_chain": 536, "chain_name": "A", "nt_resnum": 537, "nt_name": "U", "nt_code": "U", "nt_id": "///A/537", "linked_nts": [ "///A/536", "///A/538" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BII", "alpha": 57.670, "beta": -123.104, "gamma": -150.105, "delta": 148.705, "epsilon": -122.427, "zeta": 148.578, "epsilon_zeta": 88.995, "bb_type": "BII", "chi": -160.135, "glyco_bond": "anti", "C5prime_xyz": [ -2.220, 8.612, 0.897 ], "P_xyz": [ -0.432, 10.158, -0.225 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -149.898, "theta": 54.460, "eta_prime": 177.998, "theta_prime": 62.420, "eta_base": 153.785, "theta_base": 84.571, "v0": -24.139, "v1": 38.286, "v2": -36.905, "v3": 24.014, "v4": -0.129, "amplitude": 38.945, "phase_angle": 161.374, "puckering": "C2'-endo", "sugar_class": "--", "bin": "22t", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.100, "frame": { "rmsd": 0.007, "origin": [ 129.872, 210.109, 155.435 ], "x_axis": [ -0.288, 0.931, -0.225 ], "y_axis": [ 0.415, -0.091, -0.905 ], "z_axis": [ -0.863, -0.354, -0.360 ], "quaternion": [ -0.255, 0.539, 0.624, -0.504 ] } }, { "index": 2063, "index_chain": 537, "chain_name": "A", "nt_resnum": 538, "nt_name": "G", "nt_code": "G", "nt_id": "///A/538", "linked_nts": [ "///A/537", "///A/539" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix-end,multiplet", "alpha": -112.228, "beta": 93.576, "gamma": 107.111, "delta": 79.422, "epsilon": 31.661, "zeta": 156.465, "epsilon_zeta": -124.804, "bb_type": "--", "chi": 179.360, "glyco_bond": "anti", "C5prime_xyz": [ -1.060, 8.268, 1.715 ], "P_xyz": [ 0.308, 8.998, -0.399 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -128.265, "theta": -163.824, "eta_prime": -159.133, "theta_prime": -177.363, "eta_base": -158.239, "theta_base": 161.768, "v0": 8.442, "v1": -29.683, "v2": 38.587, "v3": -34.671, "v4": 16.544, "amplitude": 38.821, "phase_angle": 6.290, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 139.344, 208.272, 155.360 ], "x_axis": [ -0.495, -0.310, 0.812 ], "y_axis": [ -0.559, -0.602, -0.570 ], "z_axis": [ 0.665, -0.736, 0.125 ], "quaternion": [ 0.084, 0.496, -0.438, 0.745 ] } }, { "index": 2064, "index_chain": 538, "chain_name": "A", "nt_resnum": 539, "nt_name": "U", "nt_code": "U", "nt_id": "///A/539", "linked_nts": [ "///A/538", "///A/540" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,non-stack", "alpha": -71.831, "beta": 168.495, "gamma": 177.018, "delta": 83.780, "epsilon": -166.452, "zeta": 146.992, "epsilon_zeta": 46.556, "bb_type": "--", "chi": -157.111, "glyco_bond": "anti", "C5prime_xyz": [ -1.518, 8.807, 0.353 ], "P_xyz": [ -0.601, 10.748, -1.122 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -21.185, "theta": -8.623, "eta_prime": 10.833, "theta_prime": -38.540, "eta_base": 10.500, "theta_base": -54.003, "v0": -2.588, "v1": -18.349, "v2": 31.049, "v3": -33.456, "v4": 22.706, "amplitude": 33.710, "phase_angle": 22.918, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.104, "frame": { "rmsd": 0.007, "origin": [ 147.148, 201.704, 140.238 ], "x_axis": [ -0.607, 0.341, -0.718 ], "y_axis": [ -0.708, 0.178, 0.683 ], "z_axis": [ 0.361, 0.923, 0.133 ], "quaternion": [ 0.420, -0.143, 0.643, 0.625 ] } }, { "index": 2065, "index_chain": 539, "chain_name": "A", "nt_resnum": 540, "nt_name": "U", "nt_code": "U", "nt_id": "///A/540", "linked_nts": [ "///A/539", "///A/541" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-stack", "alpha": -84.281, "beta": -100.867, "gamma": -86.361, "delta": 128.952, "epsilon": 67.445, "zeta": 90.627, "epsilon_zeta": -23.182, "bb_type": "--", "chi": -169.861, "glyco_bond": "anti", "C5prime_xyz": [ -1.241, 8.263, 1.461 ], "P_xyz": [ -1.057, 10.856, 1.205 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -173.385, "theta": -139.937, "eta_prime": -154.171, "theta_prime": -136.598, "eta_base": -118.494, "theta_base": -97.763, "v0": -10.536, "v1": 20.058, "v2": -21.514, "v3": 15.920, "v4": -3.608, "amplitude": 21.812, "phase_angle": 170.512, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32m", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.106, "frame": { "rmsd": 0.007, "origin": [ 137.097, 211.957, 150.941 ], "x_axis": [ -0.697, -0.664, -0.270 ], "y_axis": [ 0.713, -0.601, -0.362 ], "z_axis": [ 0.078, -0.445, 0.892 ], "quaternion": [ -0.385, -0.054, -0.226, 0.893 ] } }, { "index": 2066, "index_chain": 540, "chain_name": "A", "nt_resnum": 541, "nt_name": "A", "nt_code": "A", "nt_id": "///A/541", "linked_nts": [ "///A/540", "///A/542" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end,multiplet", "alpha": 63.776, "beta": -163.643, "gamma": 167.726, "delta": 78.390, "epsilon": -138.863, "zeta": -77.411, "epsilon_zeta": -61.452, "bb_type": "BI", "chi": -168.033, "glyco_bond": "anti", "C5prime_xyz": [ -1.532, 8.652, 0.984 ], "P_xyz": [ -0.066, 10.261, -0.463 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 116.560, "theta": -166.229, "eta_prime": 165.827, "theta_prime": -164.476, "eta_base": -139.643, "theta_base": -133.123, "v0": 1.163, "v1": -24.452, "v2": 37.258, "v3": -37.573, "v4": 23.005, "amplitude": 38.952, "phase_angle": 16.957, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.038, "frame": { "rmsd": 0.014, "origin": [ 140.343, 210.550, 158.510 ], "x_axis": [ 0.063, -0.997, -0.048 ], "y_axis": [ 0.603, 0.077, -0.794 ], "z_axis": [ 0.795, 0.021, 0.606 ], "quaternion": [ 0.661, -0.308, 0.319, -0.605 ] } }, { "index": 2067, "index_chain": 541, "chain_name": "A", "nt_resnum": 542, "nt_name": "G", "nt_code": "G", "nt_id": "///A/542", "linked_nts": [ "///A/541", "///A/543" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -60.005, "beta": 164.791, "gamma": 51.990, "delta": 75.015, "epsilon": -137.347, "zeta": -86.819, "epsilon_zeta": -50.528, "bb_type": "BI", "chi": -168.922, "glyco_bond": "anti", "C5prime_xyz": [ -1.516, 8.706, 1.004 ], "P_xyz": [ 1.016, 9.292, 1.092 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 162.849, "theta": -150.519, "eta_prime": 175.779, "theta_prime": -147.067, "eta_base": -139.222, "theta_base": -120.208, "v0": 2.102, "v1": -27.204, "v2": 40.658, "v3": -40.459, "v4": 24.170, "amplitude": 42.247, "phase_angle": 15.764, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.832, "filter_rmsd": 0.012, "frame": { "rmsd": 0.012, "origin": [ 142.135, 209.178, 161.508 ], "x_axis": [ 0.288, -0.773, -0.565 ], "y_axis": [ 0.498, 0.625, -0.601 ], "z_axis": [ 0.818, -0.108, 0.565 ], "quaternion": [ 0.787, -0.157, 0.439, -0.404 ] } }, { "index": 2068, "index_chain": 542, "chain_name": "A", "nt_resnum": 543, "nt_name": "G", "nt_code": "G", "nt_id": "///A/543", "linked_nts": [ "///A/542", "///A/544" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -43.514, "beta": 165.298, "gamma": 43.363, "delta": 75.934, "epsilon": -166.524, "zeta": -91.083, "epsilon_zeta": -75.441, "bb_type": "BI", "chi": -158.048, "glyco_bond": "anti", "C5prime_xyz": [ -1.373, 8.791, 0.367 ], "P_xyz": [ 1.201, 9.250, 0.414 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.494, "theta": -140.774, "eta_prime": -179.201, "theta_prime": -141.814, "eta_base": -139.315, "theta_base": -114.362, "v0": 2.838, "v1": -27.267, "v2": 40.160, "v3": -39.525, "v4": 23.126, "amplitude": 41.529, "phase_angle": 14.752, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.445, "filter_rmsd": 0.013, "frame": { "rmsd": 0.013, "origin": [ 144.271, 206.756, 163.489 ], "x_axis": [ 0.408, -0.286, -0.867 ], "y_axis": [ 0.375, 0.918, -0.126 ], "z_axis": [ 0.833, -0.274, 0.482 ], "quaternion": [ 0.838, 0.044, 0.507, -0.197 ] } }, { "index": 2069, "index_chain": 543, "chain_name": "A", "nt_resnum": 544, "nt_name": "U", "nt_code": "U", "nt_id": "///A/544", "linked_nts": [ "///A/543", "///A/545" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,canonical,helix,stem-end", "alpha": 170.500, "beta": -134.532, "gamma": 155.435, "delta": 81.276, "epsilon": -118.394, "zeta": -65.454, "epsilon_zeta": -52.940, "bb_type": "--", "chi": -163.773, "glyco_bond": "anti", "C5prime_xyz": [ -1.493, 8.673, 0.773 ], "P_xyz": [ 0.528, 9.262, -0.741 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 169.118, "theta": -119.337, "eta_prime": -175.588, "theta_prime": -117.011, "eta_base": -134.680, "theta_base": -80.816, "v0": 2.527, "v1": -25.007, "v2": 36.931, "v3": -36.417, "v4": 21.343, "amplitude": 38.215, "phase_angle": 14.892, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33t", "cluster": "1c", "suiteness": 0.097, "filter_rmsd": 0.105, "frame": { "rmsd": 0.016, "origin": [ 146.548, 204.532, 163.598 ], "x_axis": [ 0.498, 0.222, -0.838 ], "y_axis": [ 0.357, 0.829, 0.431 ], "z_axis": [ 0.791, -0.514, 0.333 ], "quaternion": [ 0.815, 0.290, 0.499, -0.041 ] } }, { "index": 2070, "index_chain": 544, "chain_name": "A", "nt_resnum": 545, "nt_name": "G", "nt_code": "G", "nt_id": "///A/545", "linked_nts": [ "///A/544", "///A/546" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -56.562, "beta": -179.942, "gamma": 56.570, "delta": 136.942, "epsilon": -142.193, "zeta": 159.648, "epsilon_zeta": 58.159, "bb_type": "--", "chi": -112.873, "glyco_bond": "anti", "C5prime_xyz": [ -2.250, 8.471, -1.649 ], "P_xyz": [ 0.151, 9.520, -1.707 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.796, "theta": 136.793, "eta_prime": -149.678, "theta_prime": 130.601, "eta_base": -100.017, "theta_base": 157.462, "v0": -26.764, "v1": 35.364, "v2": -29.991, "v3": 15.375, "v4": 7.003, "amplitude": 34.707, "phase_angle": 149.784, "puckering": "C2'-endo", "sugar_class": "--", "bin": "32p", "cluster": "1b", "suiteness": 0.528, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 150.705, 205.013, 161.487 ], "x_axis": [ 0.182, 0.937, -0.298 ], "y_axis": [ 0.228, 0.255, 0.940 ], "z_axis": [ 0.957, -0.239, -0.167 ], "quaternion": [ 0.563, 0.523, 0.557, 0.315 ] } }, { "index": 2071, "index_chain": 545, "chain_name": "A", "nt_resnum": 546, "nt_name": "A", "nt_code": "A", "nt_id": "///A/546", "linked_nts": [ "///A/545", "///A/547" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": -74.853, "beta": 151.423, "gamma": 47.728, "delta": 80.859, "epsilon": -127.553, "zeta": -48.312, "epsilon_zeta": -79.241, "bb_type": "--", "chi": -174.526, "glyco_bond": "anti", "C5prime_xyz": [ -1.358, 8.505, 1.341 ], "P_xyz": [ 1.240, 8.568, 1.582 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -179.624, "theta": -101.398, "eta_prime": 168.123, "theta_prime": -99.131, "eta_base": 179.706, "theta_base": -52.215, "v0": 2.815, "v1": -25.387, "v2": 37.022, "v3": -36.389, "v4": 21.179, "amplitude": 38.232, "phase_angle": 14.452, "puckering": "C3'-endo", "sugar_class": "--", "bin": "23p", "cluster": "0a", "suiteness": 0.472, "filter_rmsd": 0.042, "frame": { "rmsd": 0.009, "origin": [ 151.808, 195.962, 164.273 ], "x_axis": [ 0.461, 0.668, -0.584 ], "y_axis": [ 0.001, 0.657, 0.754 ], "z_axis": [ 0.888, -0.348, 0.302 ], "quaternion": [ 0.778, 0.354, 0.473, 0.215 ] } }, { "index": 2072, "index_chain": 546, "chain_name": "A", "nt_resnum": 547, "nt_name": "C", "nt_code": "C", "nt_id": "///A/547", "linked_nts": [ "///A/546", "///A/548" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem-end", "alpha": -78.609, "beta": 172.849, "gamma": 63.994, "delta": 79.640, "epsilon": -139.405, "zeta": -73.866, "epsilon_zeta": -65.538, "bb_type": "BI", "chi": -166.765, "glyco_bond": "anti", "C5prime_xyz": [ -1.205, 8.698, 0.938 ], "P_xyz": [ 1.405, 9.034, 0.936 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 155.771, "theta": -139.983, "eta_prime": -170.782, "theta_prime": -138.349, "eta_base": -91.578, "theta_base": -106.300, "v0": 3.390, "v1": -26.349, "v2": 38.175, "v3": -37.037, "v4": 21.206, "amplitude": 39.282, "phase_angle": 13.637, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.439, "filter_rmsd": 0.069, "frame": { "rmsd": 0.012, "origin": [ 156.967, 200.083, 164.273 ], "x_axis": [ 0.035, 0.850, 0.526 ], "y_axis": [ -0.365, -0.479, 0.798 ], "z_axis": [ 0.930, -0.220, 0.293 ], "quaternion": [ 0.461, 0.553, 0.219, 0.659 ] } }, { "index": 2073, "index_chain": 547, "chain_name": "A", "nt_resnum": 548, "nt_name": "U", "nt_code": "U", "nt_id": "///A/548", "linked_nts": [ "///A/547", "///A/549" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -74.993, "beta": 163.647, "gamma": 70.048, "delta": 79.743, "epsilon": -143.643, "zeta": -100.340, "epsilon_zeta": -43.303, "bb_type": "BI", "chi": -153.054, "glyco_bond": "anti", "C5prime_xyz": [ -1.670, 8.755, 0.077 ], "P_xyz": [ 0.757, 9.191, -0.796 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 163.671, "theta": -167.189, "eta_prime": -178.036, "theta_prime": -169.543, "eta_base": -129.348, "theta_base": -165.515, "v0": 0.510, "v1": -23.822, "v2": 36.858, "v3": -37.446, "v4": 23.306, "amplitude": 38.711, "phase_angle": 17.800, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.513, "filter_rmsd": 0.106, "frame": { "rmsd": 0.015, "origin": [ 159.533, 201.298, 164.929 ], "x_axis": [ -0.111, 0.466, 0.878 ], "y_axis": [ -0.007, -0.884, 0.468 ], "z_axis": [ 0.994, 0.046, 0.101 ], "quaternion": [ 0.163, 0.646, 0.178, 0.724 ] } }, { "index": 2074, "index_chain": 548, "chain_name": "A", "nt_resnum": 549, "nt_name": "G", "nt_code": "G", "nt_id": "///A/549", "linked_nts": [ "///A/548", "///A/550" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,stem", "alpha": -61.393, "beta": 163.650, "gamma": 54.831, "delta": 78.140, "epsilon": -165.018, "zeta": -78.348, "epsilon_zeta": -86.670, "bb_type": "BI", "chi": -168.912, "glyco_bond": "anti", "C5prime_xyz": [ -1.511, 8.736, 1.033 ], "P_xyz": [ 1.032, 9.245, 1.273 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 168.282, "theta": -131.477, "eta_prime": 170.869, "theta_prime": -134.035, "eta_base": -176.863, "theta_base": -87.112, "v0": 0.201, "v1": -23.883, "v2": 37.124, "v3": -37.880, "v4": 23.866, "amplitude": 39.089, "phase_angle": 18.244, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.443, "filter_rmsd": 0.015, "frame": { "rmsd": 0.015, "origin": [ 164.516, 202.315, 163.362 ], "x_axis": [ -0.566, 0.240, 0.788 ], "y_axis": [ -0.111, -0.970, 0.216 ], "z_axis": [ 0.817, 0.035, 0.576 ], "quaternion": [ 0.100, 0.455, 0.071, 0.882 ] } }, { "index": 2075, "index_chain": 549, "chain_name": "A", "nt_resnum": 550, "nt_name": "C", "nt_code": "C", "nt_id": "///A/550", "linked_nts": [ "///A/549", "///A/551" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix-end,stem-end", "alpha": -172.246, "beta": -139.554, "gamma": 129.447, "delta": 78.073, "epsilon": -139.836, "zeta": -62.167, "epsilon_zeta": -77.669, "bb_type": "BI", "chi": -168.640, "glyco_bond": "anti", "C5prime_xyz": [ -1.177, 8.659, 1.064 ], "P_xyz": [ 1.271, 8.840, 0.157 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 153.297, "theta": -127.087, "eta_prime": 175.766, "theta_prime": -131.797, "eta_base": -115.736, "theta_base": -104.160, "v0": 3.154, "v1": -26.583, "v2": 38.792, "v3": -37.872, "v4": 21.830, "amplitude": 39.996, "phase_angle": 14.089, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.070, "frame": { "rmsd": 0.017, "origin": [ 165.754, 203.104, 167.063 ], "x_axis": [ -0.459, -0.591, 0.664 ], "y_axis": [ 0.469, -0.795, -0.384 ], "z_axis": [ 0.754, 0.136, 0.642 ], "quaternion": [ -0.312, 0.417, -0.073, 0.851 ] } }, { "index": 2076, "index_chain": 550, "chain_name": "A", "nt_resnum": 551, "nt_name": "G", "nt_code": "G", "nt_id": "///A/551", "linked_nts": [ "///A/550", "///A/552" ], "nt_type": "RNA", "dbn": ".", "summary": "anti", "alpha": -74.207, "beta": 172.897, "gamma": 71.309, "delta": 78.140, "epsilon": -132.841, "zeta": -110.515, "epsilon_zeta": -22.326, "bb_type": "--", "chi": -161.310, "glyco_bond": "anti", "C5prime_xyz": [ -1.681, 8.868, 0.554 ], "P_xyz": [ 0.816, 9.618, 0.382 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.648, "theta": -133.582, "eta_prime": -168.222, "theta_prime": -135.674, "eta_base": -118.712, "theta_base": -113.396, "v0": -2.627, "v1": -21.465, "v2": 36.077, "v3": -38.507, "v4": 25.951, "amplitude": 39.003, "phase_angle": 22.337, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.458, "filter_rmsd": 0.016, "frame": { "rmsd": 0.016, "origin": [ 166.415, 202.923, 171.180 ], "x_axis": [ -0.106, -0.964, 0.246 ], "y_axis": [ 0.737, -0.242, -0.631 ], "z_axis": [ 0.667, 0.114, 0.736 ], "quaternion": [ 0.589, -0.316, 0.179, -0.722 ] } }, { "index": 2077, "index_chain": 551, "chain_name": "A", "nt_resnum": 552, "nt_name": "U", "nt_code": "U", "nt_id": "///A/552", "linked_nts": [ "///A/551", "///A/553" ], "nt_type": "RNA", "dbn": ".", "summary": "turn,anti,BII,canonical,helix-end,multiplet", "alpha": 74.571, "beta": 144.230, "gamma": 41.589, "delta": 84.618, "epsilon": -120.232, "zeta": -179.268, "epsilon_zeta": 59.036, "bb_type": "BII", "chi": -127.176, "glyco_bond": "anti", "C5prime_xyz": [ -1.947, 8.516, -1.419 ], "P_xyz": [ 0.588, 8.670, -2.079 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": -89.562, "theta": 154.134, "eta_prime": -81.445, "theta_prime": 153.195, "eta_base": -92.810, "theta_base": 165.284, "v0": -2.852, "v1": -18.679, "v2": 31.772, "v3": -34.267, "v4": 23.496, "amplitude": 34.571, "phase_angle": 23.212, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "7d", "suiteness": 0.549, "filter_rmsd": 0.107, "frame": { "rmsd": 0.018, "origin": [ 180.731, 202.675, 175.668 ], "x_axis": [ 0.645, -0.325, -0.692 ], "y_axis": [ -0.556, 0.421, -0.717 ], "z_axis": [ 0.524, 0.847, 0.091 ], "quaternion": [ 0.734, -0.532, 0.414, 0.079 ] } }, { "index": 2078, "index_chain": 552, "chain_name": "A", "nt_resnum": 553, "nt_name": "A", "nt_code": "A", "nt_id": "///A/553", "linked_nts": [ "///A/552", "///A/554" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,non-canonical,helix", "alpha": 77.951, "beta": -179.227, "gamma": -125.421, "delta": 80.752, "epsilon": -121.673, "zeta": -86.914, "epsilon_zeta": -34.760, "bb_type": "--", "chi": -175.153, "glyco_bond": "anti", "C5prime_xyz": [ -1.180, 8.376, 1.404 ], "P_xyz": [ -0.711, 10.932, 1.607 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 172.412, "theta": 174.912, "eta_prime": 146.191, "theta_prime": -169.302, "eta_base": 135.949, "theta_base": -130.990, "v0": 6.009, "v1": -28.453, "v2": 38.786, "v3": -36.354, "v4": 19.159, "amplitude": 39.384, "phase_angle": 10.001, "puckering": "C3'-endo", "sugar_class": "--", "bin": "trig", "cluster": "!!", "suiteness": 0.000, "filter_rmsd": 0.044, "frame": { "rmsd": 0.017, "origin": [ 174.760, 218.117, 177.570 ], "x_axis": [ 0.733, -0.351, 0.582 ], "y_axis": [ -0.012, -0.862, -0.506 ], "z_axis": [ 0.680, 0.364, -0.637 ], "quaternion": [ -0.242, 0.899, -0.101, 0.351 ] } }, { "index": 2079, "index_chain": 553, "chain_name": "A", "nt_resnum": 554, "nt_name": "C", "nt_code": "C", "nt_id": "///A/554", "linked_nts": [ "///A/553", "///A/555" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,canonical,helix,multiplet", "alpha": -56.113, "beta": 164.291, "gamma": 50.095, "delta": 78.423, "epsilon": -150.553, "zeta": -65.055, "epsilon_zeta": -85.498, "bb_type": "BI", "chi": -158.118, "glyco_bond": "anti", "C5prime_xyz": [ -1.454, 8.806, 0.391 ], "P_xyz": [ 1.100, 9.321, 0.295 ], "form": "-", "ssZp": null, "Dp": null, "splay_angle": null, "splay_distance": null, "splay_ratio": null, "d22": null, "d64": null, "eta": 161.815, "theta": -141.585, "eta_prime": 177.032, "theta_prime": -141.450, "eta_base": -143.661, "theta_base": -116.663, "v0": 0.958, "v1": -24.817, "v2": 37.787, "v3": -38.169, "v4": 23.516, "amplitude": 39.548, "phase_angle": 17.159, "puckering": "C3'-endo", "sugar_class": "--", "bin": "33p", "cluster": "1a", "suiteness": 0.520, "filter_rmsd": 0.069, "frame": { "rmsd": 0.016, "origin": [ 177.862, 220.150, 177.219 ], "x_axis": [ 0.471, -0.833, 0.291 ], "y_axis": [ -0.297, -0.460, -0.837 ], "z_axis": [ 0.831, 0.308, -0.464 ], "quaternion": [ -0.370, 0.774, -0.365, 0.362 ] } }, { "index": 2080, "index_chain": 554, "chain_name": "A", "nt_resnum": 555, "nt_name": "C", "nt_code": "C", "nt_id": "///A/555", "linked_nts": [ "///A/554", "///A/556" ], "nt_type": "RNA", "dbn": ".", "summary": "anti,BI,non-canonical,helix", "alpha": -80.301, "beta": 175.119, "gamma": 72.805, "delta": 78.579, "epsilon": -147.194, "zeta": -67.234, "epsilon_zeta": -79.959, "bb_type": "BI", "chi": -155.637, "glyco_bond": "anti", "C5prime_xyz": [ -1.644, 8.864, 0.183 ], "P_xyz": [ 0.789, 9.612, -0.336 ], "form": "-", "ssZp": nul